Citrus Sinensis ID: 035965

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
Protein Sequence
MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPPILK
Secondary Structure (PSIPRED)
ccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccccccccccccccEEEEccccccccHHHHHccccEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEcccEEEEEcccccccccccccccccccHHHccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHHcccccccccccccccccccEEEEEHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHccccccccHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEEccccccHHccccccHHEEEEEccccccccHHHHHcccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEEEcccccccccEEcccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccEEEEEccEEEcccccccccHHHHHHHHHHccccHHHHHHHHcccccccEEEEEHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHccccccccccccccccccEEEcHHHHHHcccEEEccHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mekpeestgrsktfcvtgangyIGSWLVKTLLERGyivhatvrdpgklqifskwtrsDRLRLFQADLQvegsfdkavmgcdGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTitakdssgewrpvvdescqtpihhvwnkkaSGWVYVLSKLLSEETAFKFANENKIDLVSVITTtvagpfltssvpsSIQVLlspitgdsKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYiccvkscpisefidhlkleypsskmqtfegenqssvpsvisseklkdlGFNYKHGIEDIICQTiascvdcgflppilk
Flexible Loop (DISEMBL)
mekpeestgrsktfcvtgangYIGSWLVKTLLERGYIVHatvrdpgklqifskwtrsdRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSesvkrvvltssvstitakdssgewrpVVDESCQTPihhvwnkkasGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPPILK
Low Complexity Region (SEG)
MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPPILK
Disordered region (IsUnstruct)
************TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEY************************LKDLGFNYKHGIEDIICQTIASCVDCGFLPP***
Disordered Region (DISOPRED)
***************VTGANGYIGSWLVKTLLERGYIVHATVRD**********TRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPPIL*
Disordered Region (DISEMBL)
***********KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVST************VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKM*************VISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPPILK
Disordered Region (DISPRO)
**********SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPPILK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	348	2.2.26 [Sep-21-2011]
P51102	382	Dihydroflavonol-4-reducta	no	no	0.913	0.832	0.417	2e-71
P51110	337	Dihydroflavonol-4-reducta	no	no	0.916	0.946	0.413	2e-70
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.913	0.913	0.394	3e-66
P14721	446	Dihydroflavonol-4-reducta	N/A	no	0.925	0.721	0.393	4e-66
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.913	0.916	0.391	9e-66
P51104	360	Dihydroflavonol-4-reducta	N/A	no	0.913	0.883	0.398	2e-65
P51105	366	Dihydroflavonol-4-reducta	N/A	no	0.905	0.860	0.391	2e-64
P51106	354	Dihydroflavonol-4-reducta	N/A	no	0.916	0.901	0.369	2e-62
P51103	364	Dihydroflavonol-4-reducta	N/A	no	0.902	0.862	0.405	5e-62
P14720	380	Dihydroflavonol-4-reducta	N/A	no	0.905	0.828	0.385	4e-61

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score =  270 bits (689), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 142/340 (41%), Positives = 209/340 (61%), Gaps = 22/340 (6%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQA 65
           + +T CVTGA+G+IGSWLV  LLERGY V ATVRDPG L+    +         L L++A
Sbjct: 4   QKETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKA 63

Query: 66  DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           DL  EGS+D A+ GCDGVFHVA  M+F+    +N        VI P +   L ++KAC+K
Sbjct: 64  DLSEEGSYDDAINGCDGVFHVATPMDFESKDPEN-------EVIKPTVNGMLGIMKACVK 116

Query: 126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEET 185
           +++V+R V TSS  T+  ++     + V DE+  + +  + +KK +GW+Y +SK L+E+ 
Sbjct: 117 AKTVRRFVFTSSAGTVNVEEHQ---KNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKA 173

Query: 186 AFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI 245
           A+ FA E  +D +S+I T V GPF+T+S+P S+   LSPIT +   +SI+     R G  
Sbjct: 174 AWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSII-----RQGQ- 227

Query: 246 ALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKM-QTFEGENQS 304
             VH++D+CNAHIFL E   A+G+YIC      I      L+ +YP   +  TFEG +++
Sbjct: 228 -YVHLDDLCNAHIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPSTFEGVDEN 286

Query: 305 SVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP 344
                 SS+KL D+GFN+K+ +E++  ++I +C   GFLP
Sbjct: 287 LKSIEFSSKKLTDMGFNFKYSLEEMFIESIETCRQKGFLP 326

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 1EC: 9

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  266 bits (679), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/341 (41%), Positives = 207/341 (60%), Gaps = 22/341 (6%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQA 65
           +S+T CVTGA+G+IGSWLV  LLER   V ATVRDP  ++    +         L L++A
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLERRLTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKA 63

Query: 66  DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           DL  EGSFD+A+ GC GVFHVA  M+F+    +N        VI P I+  L ++K+C  
Sbjct: 64  DLADEGSFDEAIKGCTGVFHVATPMDFESKDPEN-------EVIKPTIEGMLGIMKSCAA 116

Query: 126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEET 185
           +++V+R+V TSS  T+  ++      PV DESC + +     KK + W+Y +SK L+E+ 
Sbjct: 117 AKTVRRLVFTSSAGTVNIQEHQ---LPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQA 173

Query: 186 AFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI 245
           A+K+A EN ID +++I T V GPF+ SS+P S+   LSPITG+   +SI+     R G  
Sbjct: 174 AWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSII-----RQGQ- 227

Query: 246 ALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQT-FEGENQS 304
             VH++D+CNAHI+L EN +A+G+YIC    C I +    L+ +YP   + T F+G +++
Sbjct: 228 -FVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDEN 286

Query: 305 SVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPP 345
                 SS+KL DLGF +K+ +ED+    + +C   G L P
Sbjct: 287 LKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLRP 327

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  252 bits (644), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 134/340 (39%), Positives = 208/340 (61%), Gaps = 22/340 (6%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP---GKLQIFSKWTRSD-RLRLFQA 65
            S++ CVTGA+G+IGSWLV  LLE GY V ATVRDP    K++      +++  L L++A
Sbjct: 4   ESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKA 63

Query: 66  DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           DL  EGSFD+A+ GC GVFHVA  M+F+    +N        VI P I   L++LKAC K
Sbjct: 64  DLADEGSFDEAIQGCSGVFHVATPMDFESKDPEN-------EVIKPTINGLLDILKACQK 116

Query: 126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEET 185
           +++V+++V TSS  T+  ++     +PV DES  + +    + K +GW+Y +SK L+E+ 
Sbjct: 117 AKTVRKLVFTSSAGTVNVEEHQ---KPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQA 173

Query: 186 AFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI 245
           A+K+A EN ID +++I T V GPFL  S+P S+   LSPI  +   + I+     + G  
Sbjct: 174 AWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGII-----KQGQ- 227

Query: 246 ALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQT-FEGENQS 304
             VH++D+C +HI+L E+ +A+G+YIC      I E +  L+ +YP   + T F+G + +
Sbjct: 228 -YVHLDDLCLSHIYLYEHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKGIDDN 286

Query: 305 SVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP 344
             P   SS+KL+++GF +K+ +ED+    + +C   G +P
Sbjct: 287 LEPVHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLIP 326

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P14721|DFRA_ANTMA Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1

 Score =  251 bits (642), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 136/346 (39%), Positives = 209/346 (60%), Gaps = 24/346 (6%)

Query: 5   EESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG---KLQIFSKWTRSD-RL 60
           E +   S T CVTGA G+IGSWLV  LLERGY V ATVRDPG   K++   +  ++D  L
Sbjct: 11  ETAPPSSTTVCVTGAAGFIGSWLVMRLLERGYTVRATVRDPGNMKKVKHLIELPKADTNL 70

Query: 61  RLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLL 120
            L++AD+ VEGSFD+A+ GC+GVFH+A SMEFD    +N        VI P I   LN++
Sbjct: 71  TLWKADMTVEGSFDEAIQGCEGVFHLATSMEFDSVDPEN-------EVIKPTIDGMLNII 123

Query: 121 KACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKL 180
           K+C+++++VK+ + T+S  T+  ++     +PV DE+  + +  + +KK +GW+Y +SK+
Sbjct: 124 KSCVQAKTVKKFIFTTSGGTVNVEEHQ---KPVYDETDSSDMDFINSKKMTGWMYFVSKI 180

Query: 181 LSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSN 240
           L+E+   + A EN ID +S+I   V GPF+  + P S+   LSPITG+   +SI+     
Sbjct: 181 LAEKAGMEAAKENNIDFISIIPPLVVGPFIMPTFPPSLITALSPITGNEAHYSIIKQCQ- 239

Query: 241 RMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKM-QTFE 299
                  VH++D+C  HIFL E  +A+G+YIC      I +    +   +P   +   FE
Sbjct: 240 ------YVHLDDLCEGHIFLFEYPKAEGRYICSSHDATIYDIAKLITENWPEYHIPDEFE 293

Query: 300 GENQSSVPSV-ISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP 344
           G ++  +P V  SS+K+  +GF +K+ +ED++   I +C + G LP
Sbjct: 294 GIDK-DIPVVSFSSKKMIGMGFIFKYTLEDMVRGAIDTCREKGMLP 338

Antirrhinum majus (taxid: 4151)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  250 bits (639), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 133/340 (39%), Positives = 208/340 (61%), Gaps = 22/340 (6%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP---GKLQIFSKWTRSD-RLRLFQA 65
            S++ CVTGA+G+IGSWLV  LLE GY V ATVRDP    K++      +++  L L++A
Sbjct: 4   ESESVCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKA 63

Query: 66  DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           DL  EGSFD+A+ GC GVFHVA  M+F+    +N        VI P I   L++LKAC K
Sbjct: 64  DLADEGSFDEAIQGCSGVFHVATPMDFESRDPEN-------EVIKPTINGLLDILKACQK 116

Query: 126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEET 185
           +++V+++V TSS  T+  ++     +PV DES  + +    + K +GW+Y +SK L+E+ 
Sbjct: 117 AKTVRKLVFTSSAGTVNVEEHQ---KPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQA 173

Query: 186 AFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI 245
           A+K+A EN ID +++I T V GPFL  S+P S+   LSPI  +   + I+     + G  
Sbjct: 174 AWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGII-----KQGQ- 227

Query: 246 ALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQT-FEGENQS 304
             VH++D+C +HI+L ++ +A+G+YIC      I E +  L+ +YP   + T F+G + +
Sbjct: 228 -YVHLDDLCLSHIYLYKHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKGIDDN 286

Query: 305 SVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP 344
             P   SS+KL+++GF +K+ +ED+    + +C   G +P
Sbjct: 287 LEPVHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLIP 326

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1

 Score =  249 bits (637), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 136/341 (39%), Positives = 205/341 (60%), Gaps = 23/341 (6%)

Query: 9   GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG---KLQ-IFSKWTRSDRLRLFQ 64
           G+ +T CVTGA+G+IGSWL+  LLERGY V ATVRDP    K+Q +         L L++
Sbjct: 20  GQGETVCVTGASGFIGSWLIMRLLERGYTVRATVRDPDNTKKVQHLLDLPNAKTNLTLWK 79

Query: 65  ADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL 124
           ADL  EGSFD AV GC GVFH+A  M+F+    +N        +I P I   L++LK+C+
Sbjct: 80  ADLHEEGSFDAAVDGCTGVFHIATPMDFESKDPEN-------EMIKPTINGMLDILKSCV 132

Query: 125 KSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEE 184
           K++ ++RVV TSS  T+  + +    +PV DE+C + +  + + K +GW+Y +SK+L+E+
Sbjct: 133 KAK-LRRVVFTSSGGTVNVEATQ---KPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQ 188

Query: 185 TAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS 244
            A+K+A EN ++ +S+I   V GPF+  S+P S+   LSPIT     ++I+     + G 
Sbjct: 189 AAWKYAAENNLEFISIIPPLVVGPFIMPSMPPSLITALSPITRTESHYTII-----KQGQ 243

Query: 245 IALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQT-FEGENQ 303
              VH++D+C +HIFL EN +A G+YI    +  I +    L+ EYP   + T F+   +
Sbjct: 244 --FVHLDDLCMSHIFLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVPTKFKDYKE 301

Query: 304 SSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP 344
                  SS+KL DLGF +K+G++D+    + SC   G LP
Sbjct: 302 DMGQVQFSSKKLTDLGFEFKYGLKDMYTAAVESCRAKGLLP 342

Dianthus caryophyllus (taxid: 3570)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1

 Score =  246 bits (628), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 132/337 (39%), Positives = 202/337 (59%), Gaps = 22/337 (6%)

Query: 13  TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQADLQ 68
           T CVTGA G+IGSWLV  LLERGY+VHATVRDPG L+    +         L+L++ADL 
Sbjct: 8   TVCVTGAAGFIGSWLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLKLWKADLT 67

Query: 69  VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
            EGSFD+A+ GC GVFH+A  M+F+    +N        +I P I+  L+++++C+K+++
Sbjct: 68  QEGSFDEAIQGCHGVFHLATPMDFESKDPEN-------EIIKPTIEGVLSIIRSCVKAKT 120

Query: 129 VKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFK 188
           VK++V TSS  T+  ++       V DES  + +  +++KK + W+Y +SK L+E+ A+ 
Sbjct: 121 VKKLVFTSSAGTVNGQEKQLH---VYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWD 177

Query: 189 FANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALV 248
               N I  +S+I T V GPF+TS+ P S+   LS ITG+   +SI+     + G    V
Sbjct: 178 ATKGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITGNEAHYSII-----KQGQ--YV 230

Query: 249 HIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQT-FEGENQSSVP 307
           H++D+C  HI+L EN +A+G+YIC      I +    +K ++P   + T F G ++    
Sbjct: 231 HLDDLCECHIYLYENPKAKGRYICSSHDATIHQLAKIIKDKWPEYYIPTKFPGIDEELPI 290

Query: 308 SVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP 344
              SS+KL D GF +K+ +ED+    I +C + G LP
Sbjct: 291 VSFSSKKLIDTGFEFKYNLEDMFKGAIDTCREKGLLP 327

Gerbera hybrida (taxid: 18101)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1

 Score =  239 bits (610), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 126/341 (36%), Positives = 197/341 (57%), Gaps = 22/341 (6%)

Query: 9   GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQ 64
           G      VTGA+G++GSWLV  LL+ GY V ATVRDP  ++    +       +RL +++
Sbjct: 3   GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWK 62

Query: 65  ADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL 124
           ADL  +GSF++A+ GC GVFHVA  M+FD    +N        VI P ++  L++++AC 
Sbjct: 63  ADLSEDGSFNEAIAGCTGVFHVATPMDFDSQDPEN-------EVIKPTVEGMLSIMRACK 115

Query: 125 KSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEE 184
           ++ +VKR+V TSS  ++  ++     RP  D+   + I +    K +GW+Y +SK L+E+
Sbjct: 116 EAGTVKRIVFTSSAGSVNIEERP---RPAYDQDNWSDIDYCRRVKMTGWMYFVSKALAEK 172

Query: 185 TAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS 244
            A ++A+EN +D +S+I T V GPFL++ +P S+   L+ ITG+   +SIL  V      
Sbjct: 173 AAMEYASENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGNEAHYSILKQVQ----- 227

Query: 245 IALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKM-QTFEGENQ 303
             LVH++D+C+A  FL E+  A G+YIC      I      L+  +P   + Q F G + 
Sbjct: 228 --LVHLDDLCDAMTFLFEHPEANGRYICSSHDATIHGLARMLQDRFPEYDIPQKFAGVDD 285

Query: 304 SSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP 344
           +  P   SS+KL D GF++++  ED+    I +C D G +P
Sbjct: 286 NLQPIHFSSKKLLDHGFSFRYTTEDMFDAAIHTCRDKGLIP 326

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51103|DFRA_CALCH Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1

 Score =  238 bits (607), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 137/338 (40%), Positives = 205/338 (60%), Gaps = 24/338 (7%)

Query: 13  TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQADLQ 68
           T CVTGA G+IGSWLV  LLERGYIV ATVR+PG ++    +         L L++ADL 
Sbjct: 8   TVCVTGAAGFIGSWLVMRLLERGYIVRATVRNPGDMKKVKHLLELPKAETNLTLWKADLT 67

Query: 69  VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
            EGSFD+A+ GC GVFHVA  M+F+    +N        +I P I+  L+++++C K+++
Sbjct: 68  QEGSFDEAIEGCHGVFHVATPMDFESKDPEN-------EIIKPTIEGILSIIRSCAKAKT 120

Query: 129 VKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFK 188
           VK++V TSS  T+  +++     PV DES  + +  +++KK + W+Y +SK L+E+ A +
Sbjct: 121 VKKLVYTSSAGTVNVQETQ---LPVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAME 177

Query: 189 FANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALV 248
            A EN ID VS+I   V GPF+  + P S+   LS I G    +SI+     + G    V
Sbjct: 178 AAKENNIDFVSIIPPLVVGPFINPTFPPSLITALSLINGAESHYSII-----KQGQ--YV 230

Query: 249 HIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQT-FEGENQSSVP 307
           H++D+C  HIFL EN  A+G+YIC  +   I +    +K ++P   + T F G ++  +P
Sbjct: 231 HLDDLCECHIFLYENPEAKGRYICSKQDATIHQLARMIKQKWPEYHVPTQFAGIDE-ELP 289

Query: 308 SV-ISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP 344
           +V  SS+KL D+GF +K+ +ED+    I SC + GFLP
Sbjct: 290 TVSFSSKKLIDMGFKFKYDLEDMFKGAIDSCKEKGFLP 327

Callistephus chinensis (taxid: 13379)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2

 Score =  235 bits (600), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 130/337 (38%), Positives = 201/337 (59%), Gaps = 22/337 (6%)

Query: 13  TFCVTGANGYIGSWLVKTLLERGYIVHATVRDP---GKLQIFSKWTRSD-RLRLFQADLQ 68
           T CVTGA G+IGSWLV  LLERGY VHATVRDP    K++   +  ++D  L L++ADL 
Sbjct: 17  TVCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLT 76

Query: 69  VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
           VEGSFD+A+ GC GVFHVA  M+F+    +N        VI P ++  L+++++C K+ +
Sbjct: 77  VEGSFDEAIQGCQGVFHVATPMDFESKDPEN-------EVIKPTVRGMLSIIESCAKANT 129

Query: 129 VKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFK 188
           VKR+V TSS  T+   D   + +   D++  + +  ++ KK +GW+Y  SK+L+E+ A +
Sbjct: 130 VKRLVFTSSAGTL---DVQEQQKLFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAME 186

Query: 189 FANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALV 248
            A +  ID +S+I   V GPF+T + P S+   LS ITG+   + I+     + G    V
Sbjct: 187 EAKKKNIDFISIIPPLVVGPFITPTFPPSLITALSLITGNEAHYCII-----KQGQ--YV 239

Query: 249 HIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQT-FEGENQSSVP 307
           H++D+C AHIFL E+ +A G++IC      I +    ++ ++P   + T F+G ++    
Sbjct: 240 HLDDLCEAHIFLYEHPKADGRFICSSHHAIIYDVAKMVREKWPEYYVPTEFKGIDKDLPV 299

Query: 308 SVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP 344
              SS+KL D+GF +K+ +ED+    I +C     LP
Sbjct: 300 VSFSSKKLTDMGFQFKYTLEDMYKGAIDTCRQKQLLP 336

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	348
225461162	354	PREDICTED: dihydroflavonol-4-reductase-l	0.962	0.946	0.690	1e-133
255563631	401	cinnamoyl-CoA reductase, putative [Ricin	0.948	0.822	0.698	1e-133
224124192	351	predicted protein [Populus trichocarpa]	0.991	0.982	0.657	1e-131
356542222	359	PREDICTED: dihydroflavonol-4-reductase-l	0.959	0.930	0.677	1e-129
302143192	313	unnamed protein product [Vitis vinifera]	0.896	0.996	0.677	1e-119
363807558	353	uncharacterized protein LOC100787267 [Gl	0.994	0.980	0.605	1e-119
30687527	354	Rossmann-fold NAD(P)-binding domain-cont	0.965	0.949	0.602	1e-113
297799266	354	predicted protein [Arabidopsis lyrata su	0.956	0.940	0.605	1e-112
356545167	356	PREDICTED: LOW QUALITY PROTEIN: dihydrof	0.956	0.935	0.598	1e-112
449463178	355	PREDICTED: bifunctional dihydroflavonol	0.933	0.915	0.583	1e-109

>gi|225461162|ref|XP_002282842.1| PREDICTED: dihydroflavonol-4-reductase-like [Vitis vinifera]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 232/336 (69%), Positives = 274/336 (81%), Gaps = 1/336 (0%)

Query: 14  FCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGS 72
           FCVTGA GYIGSWLV TLL+RGY+VHAT+RDP K   +   W+  DRLRLF+ADL  EGS
Sbjct: 19  FCVTGATGYIGSWLVNTLLQRGYMVHATLRDPEKAAHLLPSWSSCDRLRLFKADLLNEGS 78

Query: 73  FDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRV 132
           FD+AV GC+GV+HVAASMEF++   +NIE YVQS +I+PAI+ TLNLLKACLKS++V+RV
Sbjct: 79  FDEAVKGCNGVYHVAASMEFNVMATENIEAYVQSNIIDPAIKGTLNLLKACLKSKTVERV 138

Query: 133 VLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE 192
           V TSS+STITAKDS G WR VVDESCQTPI HVW  +  GWVYVLSKLL+EE AF+FA E
Sbjct: 139 VFTSSISTITAKDSLGRWRAVVDESCQTPIDHVWKTRVGGWVYVLSKLLTEEAAFQFAKE 198

Query: 193 NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIED 252
           N IDLVSVITTTV GPF+TSSVPSSI+VLLSPITG+ +FFSILS+V++RMGS+ALVHIED
Sbjct: 199 NGIDLVSVITTTVGGPFITSSVPSSIRVLLSPITGEPEFFSILSAVNSRMGSLALVHIED 258

Query: 253 ICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISS 312
           ICNAHIFLME  +A+G+YIC V+S  +SE I+HL   YP S +Q    E   S PS I S
Sbjct: 259 ICNAHIFLMEQAKAEGRYICGVQSYQMSELINHLAKVYPCSNIQRLVEEECGSAPSEICS 318

Query: 313 EKLKDLGFNYKHGIEDIICQTIASCVDCGFLPPILK 348
           +KL DLGFNYK+G+EDII QTI  C+D GFLP I +
Sbjct: 319 KKLNDLGFNYKYGLEDIIQQTINCCLDHGFLPQIRR 354

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563631|ref|XP_002522817.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223537901|gb|EEF39515.1| cinnamoyl-CoA reductase, putative [Ricinus communis]

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 232/332 (69%), Positives = 279/332 (84%), Gaps = 2/332 (0%)

Query: 13  TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEG 71
           T+CVTGANGYIGSWLV+ LL+RGY+VHAT+RDP KL  + SKWT  DRLRLF ADLQ EG
Sbjct: 12  TYCVTGANGYIGSWLVRLLLQRGYLVHATLRDPAKLLHLLSKWTGGDRLRLFTADLQEEG 71

Query: 72  SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR 131
           SFD+AV GC GVFHVAASM+F +    N E Y+QS +I+PAI+ TLNLLK+CLKS+SVKR
Sbjct: 72  SFDEAVQGCHGVFHVAASMDFGLVENSNSE-YIQSKIIDPAIKGTLNLLKSCLKSKSVKR 130

Query: 132 VVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFAN 191
           VV TSS+ST+TAKDS+GEW+ VVDE+CQTPI +V N KASGWVYVLSKLLSE  AFK+A 
Sbjct: 131 VVFTSSISTLTAKDSNGEWKKVVDETCQTPIDYVLNAKASGWVYVLSKLLSEGAAFKYAQ 190

Query: 192 ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIE 251
           +N IDLVSVITTTVAGPFLTSS+P+SIQVLLSP+TGDSKF  ILS+V+ RMGSIALVHI+
Sbjct: 191 QNGIDLVSVITTTVAGPFLTSSIPASIQVLLSPVTGDSKFNPILSAVNARMGSIALVHID 250

Query: 252 DICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVIS 311
           DIC+AHIFLME  +A+G+YICC+ SC ++E I+HL  EYP S +Q   G  + S+PS IS
Sbjct: 251 DICSAHIFLMEQSQAEGRYICCMNSCLMNELINHLAEEYPCSNIQRSAGGKEGSIPSEIS 310

Query: 312 SEKLKDLGFNYKHGIEDIICQTIASCVDCGFL 343
           S+KL++LGF +KH I+DII +TI+ CVD GFL
Sbjct: 311 SKKLRELGFTFKHDIKDIIRETISCCVDYGFL 342

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124192|ref|XP_002319268.1| predicted protein [Populus trichocarpa] gi|222857644|gb|EEE95191.1| predicted protein [Populus trichocarpa]

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 228/347 (65%), Positives = 276/347 (79%), Gaps = 2/347 (0%)

Query: 1   MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK-LQIFSKWTRSDR 59
           ME  + + G   T+CVTGANGYIGSWLVK LL+RGY VHAT+RD  K L + S W  +DR
Sbjct: 1   MEVEKNTEGALPTYCVTGANGYIGSWLVKLLLQRGYTVHATLRDLAKSLDLLSSWRGADR 60

Query: 60  LRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNL 119
           LRLF+ADL+ EGSFD+AV GCDGVFHVAASMEF +   ++ E YVQ  +I+PAI+ TLNL
Sbjct: 61  LRLFKADLREEGSFDEAVRGCDGVFHVAASMEFYVAGNEDNENYVQRNIIDPAIEGTLNL 120

Query: 120 LKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSK 179
           L +C KS +VKRVV TSS+ST+TAKD +G+WR VVDE+CQTPI HVWN K  GW+YVLSK
Sbjct: 121 LTSCSKSNTVKRVVFTSSISTLTAKDGAGKWRQVVDETCQTPIDHVWNTKPPGWIYVLSK 180

Query: 180 LLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVS 239
            L+EE AFK+A +N IDL+SVITTTVAG FLTSSVPSSI+VLLSPITGD+KFFSILS+V+
Sbjct: 181 RLTEEAAFKYAKDNGIDLISVITTTVAGAFLTSSVPSSIRVLLSPITGDTKFFSILSAVN 240

Query: 240 NRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFE 299
            RMGSIALVHI+DIC+AHIFLME  RA+G+YIC   SC +S+ I+HL  EYP S +Q   
Sbjct: 241 ARMGSIALVHIDDICDAHIFLMEQTRAEGRYICSAHSCVLSQLINHLVEEYPCSNIQRL- 299

Query: 300 GENQSSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPPI 346
            E Q S+   ISS+KL+D+GF YKH I+DII +TI  C+D GFLP +
Sbjct: 300 AEKQGSISPEISSKKLRDMGFKYKHSIKDIISETITCCLDQGFLPQV 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542222|ref|XP_003539568.1| PREDICTED: dihydroflavonol-4-reductase-like [Glycine max]

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 227/335 (67%), Positives = 271/335 (80%), Gaps = 1/335 (0%)

Query: 13  TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK-LQIFSKWTRSDRLRLFQADLQVEG 71
           T+CVTGA GYIGSWLV+ LLERGY VHATVRDP K L + S WTR DRLR+F+ADL  E 
Sbjct: 23  TYCVTGATGYIGSWLVEALLERGYTVHATVRDPEKSLHLLSLWTRGDRLRIFKADLNEER 82

Query: 72  SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR 131
           SFD+AV GCDGVFHVAASMEF++  K+NIE  VQ+ +I+PAI+ T+NLLK+CL S SVKR
Sbjct: 83  SFDEAVKGCDGVFHVAASMEFNVVQKENIEACVQANIIDPAIKGTINLLKSCLNSNSVKR 142

Query: 132 VVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFAN 191
           VV TSS+STITAKDSSG+W+P+VDESCQ     V   +ASGWVY LSKLL+EE AFKFA 
Sbjct: 143 VVFTSSISTITAKDSSGKWKPLVDESCQIQSELVLKTQASGWVYALSKLLTEEAAFKFAK 202

Query: 192 ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIE 251
           EN IDLVSVIT TVAGPF T+SVPSS++VLLSPITG+ +FF ILSSV+ RMGSIALVHIE
Sbjct: 203 ENGIDLVSVITATVAGPFFTASVPSSVKVLLSPITGEPEFFKILSSVNARMGSIALVHIE 262

Query: 252 DICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVIS 311
           DIC+AHIFLME+ +A+G+YIC  +SCP+    + L  EY  S  +    +N  +VPS IS
Sbjct: 263 DICSAHIFLMEHSKAEGRYICSSQSCPLDMLANLLAKEYSYSSKKRIAEKNYDNVPSEIS 322

Query: 312 SEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPPI 346
           S+KLK+LGF+YKHG+EDII QTI  C+D G+LPPI
Sbjct: 323 SKKLKELGFSYKHGLEDIIHQTIICCLDYGYLPPI 357

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143192|emb|CBI20487.3| unnamed protein product [Vitis vinifera]

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 212/313 (67%), Positives = 253/313 (80%), Gaps = 1/313 (0%)

Query: 37  IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDIN 95
           +VHAT+RDP K   +   W+  DRLRLF+ADL  EGSFD+AV GC+GV+HVAASMEF++ 
Sbjct: 1   MVHATLRDPEKAAHLLPSWSSCDRLRLFKADLLNEGSFDEAVKGCNGVYHVAASMEFNVM 60

Query: 96  VKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVD 155
             +NIE YVQS +I+PAI+ TLNLLKACLKS++V+RVV TSS+STITAKDS G WR VVD
Sbjct: 61  ATENIEAYVQSNIIDPAIKGTLNLLKACLKSKTVERVVFTSSISTITAKDSLGRWRAVVD 120

Query: 156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVP 215
           ESCQTPI HVW  +  GWVYVLSKLL+EE AF+FA EN IDLVSVITTTV GPF+TSSVP
Sbjct: 121 ESCQTPIDHVWKTRVGGWVYVLSKLLTEEAAFQFAKENGIDLVSVITTTVGGPFITSSVP 180

Query: 216 SSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVK 275
           SSI+VLLSPITG+ +FFSILS+V++RMGS+ALVHIEDICNAHIFLME  +A+G+YIC V+
Sbjct: 181 SSIRVLLSPITGEPEFFSILSAVNSRMGSLALVHIEDICNAHIFLMEQAKAEGRYICGVQ 240

Query: 276 SCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLKDLGFNYKHGIEDIICQTIA 335
           S  +SE I+HL   YP S +Q    E   S PS I S+KL DLGFNYK+G+EDII QTI 
Sbjct: 241 SYQMSELINHLAKVYPCSNIQRLVEEECGSAPSEICSKKLNDLGFNYKYGLEDIIQQTIN 300

Query: 336 SCVDCGFLPPILK 348
            C+D GFLP I +
Sbjct: 301 CCLDHGFLPQIRR 313

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807558|ref|NP_001242148.1| uncharacterized protein LOC100787267 [Glycine max] gi|255635163|gb|ACU17938.1| unknown [Glycine max]

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/347 (60%), Positives = 267/347 (76%), Gaps = 1/347 (0%)

Query: 1   MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK-LQIFSKWTRSDR 59
           M K  E       +CVTG+ GYIGSWLV+ LLERG  VHATVRDP K L + S W   D+
Sbjct: 7   MVKSNEQVVPGAKYCVTGSTGYIGSWLVEALLERGCTVHATVRDPAKSLHLLSLWKGGDQ 66

Query: 60  LRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNL 119
           LR FQADL  EGSFD+AV GC GVFHVAASMEF++  K+N E  VQ+ + +PAI+ T+NL
Sbjct: 67  LRFFQADLHEEGSFDEAVKGCIGVFHVAASMEFNVRDKENNEAIVQANITDPAIKGTINL 126

Query: 120 LKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSK 179
           LK+CLKS SVKRVV TSS+STITAKD +G+W+ +VDESCQ     VWN +ASGWVY LSK
Sbjct: 127 LKSCLKSNSVKRVVFTSSISTITAKDINGKWKSIVDESCQIHPDTVWNTQASGWVYALSK 186

Query: 180 LLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVS 239
           LL+EE AF+FA EN IDLVSVI++TVAGPF T++VP+S++VL+SP+TG++++F ILS+V+
Sbjct: 187 LLAEEAAFQFAKENGIDLVSVISSTVAGPFFTANVPTSVKVLVSPLTGETEYFRILSAVN 246

Query: 240 NRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFE 299
            RMGSIALVHIEDIC+AHIFLME+ +A+G+YIC  +SC +S+    L   Y +S +    
Sbjct: 247 ARMGSIALVHIEDICSAHIFLMEHAKAEGRYICSSQSCALSDLATLLSKVYSNSNIYQKT 306

Query: 300 GENQSSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPPI 346
            +    VPS ISS+KL+DLGF+YKH +EDII QT+  C+D G+LPP+
Sbjct: 307 EKIYDKVPSEISSKKLQDLGFSYKHDLEDIIYQTLMCCLDYGYLPPV 353

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30687527|ref|NP_194455.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|23296465|gb|AAN13064.1| unknown protein [Arabidopsis thaliana] gi|332659916|gb|AEE85316.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/342 (60%), Positives = 263/342 (76%), Gaps = 6/342 (1%)

Query: 5   EESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIF-SKWTRSDRLRLF 63
           EES  ++ T+CVTGA+GYIGSWLVK+LL+RGY VHAT+RD  K + F SKW  ++RLRLF
Sbjct: 6   EES--KTATYCVTGASGYIGSWLVKSLLQRGYTVHATLRDLAKSEYFQSKWKENERLRLF 63

Query: 64  QADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKD-NIETYVQSTVINPAIQSTLNLLKA 122
           +ADL+ +GSFD AV GCDGVFHVAASMEFDI+    N+E+YVQS VI PA++   N+L +
Sbjct: 64  RADLRDDGSFDDAVKGCDGVFHVAASMEFDISSDHVNLESYVQSKVIEPALKGVRNVLSS 123

Query: 123 CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLS 182
           CLKS+SVKRVV TSS+ST+TAKD +   R  VDE+C+  + HV   +ASGW+YVLSKL+S
Sbjct: 124 CLKSKSVKRVVFTSSISTLTAKDENERMRSFVDETCKAHVDHVLKTQASGWIYVLSKLVS 183

Query: 183 EETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRM 242
           EE AF++A E  +DLVSVITTTV+GPFLT  VPSS+QVLLSPITGDSK F+ILS+V+ RM
Sbjct: 184 EEEAFRYAKERGMDLVSVITTTVSGPFLTPFVPSSVQVLLSPITGDSKLFAILSAVNKRM 243

Query: 243 GSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEF-IDHLKLEYPSSKMQTFEGE 301
           GSIALVHIEDIC AH+FLME  +A+GQYICCV +  + E  + H   +Y     +  E E
Sbjct: 244 GSIALVHIEDICRAHLFLMEQPKAKGQYICCVDNIDMHELMLHHFSKDYLCKVQKVNEDE 303

Query: 302 NQSS-VPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGF 342
            +   +  +ISS+KL++LGF YK+GIE+I+ QTI + +   F
Sbjct: 304 EERECMKPIISSKKLRELGFEYKYGIEEIVDQTIDASIKIKF 345

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297799266|ref|XP_002867517.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297313353|gb|EFH43776.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/337 (60%), Positives = 262/337 (77%), Gaps = 4/337 (1%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIF-SKWTRSDRLRLFQADLQ 68
           ++ T+CVTGA+GYIGSWLVK+LLE GY VHAT+RD GK Q F SKW  ++RLRLFQADLQ
Sbjct: 9   KATTYCVTGASGYIGSWLVKSLLEGGYTVHATLRDLGKSQYFQSKWKENERLRLFQADLQ 68

Query: 69  VEGSFDKAVMGCDGVFHVAASMEFDINVKD-NIETYVQSTVINPAIQSTLNLLKACLKSE 127
            +GSFD+A  GCDGVFHVAASMEFDI+    N+E+YVQS VI+PA++   N+L +CLKS+
Sbjct: 69  DDGSFDEAFKGCDGVFHVAASMEFDISSDHVNLESYVQSKVIDPAVKGVRNVLGSCLKSK 128

Query: 128 SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAF 187
           SVKRVV TSS+ST+TAKD +      VDE+C+  + HV   +ASGW+YVLSKL+SEE AF
Sbjct: 129 SVKRVVFTSSISTLTAKDDNERMTSFVDETCKAHVDHVIKTQASGWIYVLSKLVSEEEAF 188

Query: 188 KFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIAL 247
           ++A E  +DLVSVITTTV+GPFLT +VPSS+QVLLSPITGDSK F ILS+V+ RMGSIAL
Sbjct: 189 RYAKERGMDLVSVITTTVSGPFLTPNVPSSVQVLLSPITGDSKLFPILSAVNKRMGSIAL 248

Query: 248 VHIEDICNAHIFLMENDRAQGQYICCVKSCPISEF-IDHLKLEYPSSKMQTFEGE-NQSS 305
           VHIEDIC AH+FLME  +A+GQYICCV +  + E  + H   +Y    ++  E + ++  
Sbjct: 249 VHIEDICRAHLFLMEQTKAKGQYICCVDNIDMHELMLHHFSKKYLCKVLKVNEDDKDRQC 308

Query: 306 VPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGF 342
           +  +ISS+KL++LGF YK+GIE+I+ QTI + +   F
Sbjct: 309 MKPIISSKKLRELGFEYKYGIEEIVDQTIDASIKFKF 345

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545167|ref|XP_003541016.1| PREDICTED: LOW QUALITY PROTEIN: dihydroflavonol-4-reductase-like [Glycine max]

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/336 (59%), Positives = 259/336 (77%), Gaps = 3/336 (0%)

Query: 14  FCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQI---FSKWTRSDRLRLFQADLQVE 70
           +CV  + GYIGS LV+ LLERG  +HATVRDP    I    S W   D+LR FQADL  E
Sbjct: 21  YCVPSSTGYIGSXLVEALLERGCTIHATVRDPHYKVIAPSVSLWKGGDQLRFFQADLHEE 80

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
           GSFD+AV GC GVFH+AASME +++ K+N E +VQ+ +INPAI+ T+NLLK+CLKS SVK
Sbjct: 81  GSFDEAVKGCVGVFHIAASMELNVSDKENNEAFVQANIINPAIKGTINLLKSCLKSNSVK 140

Query: 131 RVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFA 190
           RVV TSS+ST+TAKD +G+ + +VDESCQ    HVWN +ASGWVY LSKLL+EE AF+FA
Sbjct: 141 RVVFTSSISTVTAKDINGKSKHIVDESCQIHPDHVWNTQASGWVYALSKLLTEEAAFQFA 200

Query: 191 NENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI 250
            EN IDLVSVIT+TVAGPF T++V +S++VLLSP+TG++++F ILS+V+ RMGSIALVHI
Sbjct: 201 KENGIDLVSVITSTVAGPFFTANVLTSVKVLLSPLTGETEYFKILSAVNARMGSIALVHI 260

Query: 251 EDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVI 310
           EDIC+AHIFL E+ +A+G+Y C  +SC +S     L   Y ++ +     +N   VPSVI
Sbjct: 261 EDICSAHIFLTEHAKAEGRYKCSSQSCTLSNLATLLSKVYXNTNIYRKTEKNYDKVPSVI 320

Query: 311 SSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPPI 346
           SS+KL+DLGF+YKHG+EDII QT+   +D G+LPP+
Sbjct: 321 SSKKLEDLGFSYKHGLEDIIYQTLMCFLDYGYLPPV 356

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463178|ref|XP_004149311.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Cucumis sativus]

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/341 (58%), Positives = 256/341 (75%), Gaps = 16/341 (4%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK-LQIFSKWTRSDRLRLFQADLQVE 70
           KT+CVTGA G+IGSWLV  LL  GY VHAT RDP K L++ S WT +DRLRLF+ADLQ E
Sbjct: 19  KTYCVTGATGFIGSWLVNLLLLNGYKVHATARDPAKSLKLLSSWTVTDRLRLFKADLQEE 78

Query: 71  GSFD--------KAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA 122
           GSFD        +AV GCDGVFHVAASM F +        YVQ  VI+P I+ T+NLLK+
Sbjct: 79  GSFDLQEEGSFDEAVKGCDGVFHVAASMTFKVFFF---FFYVQKNVIDPEIKGTINLLKS 135

Query: 123 CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLS 182
           CLKS+SVKRVVLTS++ST+T KD+ GE R +VDESC+T +  VW  K SGWVY L K LS
Sbjct: 136 CLKSKSVKRVVLTSTISTLTGKDADGERRRLVDESCRTLVDQVWKNKPSGWVYSLLKRLS 195

Query: 183 EETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRM 242
           E+ AFKFA+EN ID+VS+IT+TV+GPFLTS +PSSI+V  +PIT    F  ILS+V+ RM
Sbjct: 196 EDAAFKFASENSIDIVSIITSTVSGPFLTSYIPSSIRVFTAPIT---DFLRILSNVNERM 252

Query: 243 GSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGEN 302
           GS+A+VH  DIC AHIFLME++ A+G+Y+CCV+SC +SE ++ L   +  +  Q    E 
Sbjct: 253 GSVAVVHTNDICRAHIFLMEHENAKGRYLCCVESCGLSELVERLS-RHCGANFQRCVDEK 311

Query: 303 QSSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFL 343
           ++ +PS +S++KLKDLGF ++HGI+DII +TI +CV+CGF+
Sbjct: 312 KNWMPSEVSNKKLKDLGFRFEHGIDDIINETIDACVECGFI 352

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	348
TAIR|locus:2131734	354	AT4G27250 [Arabidopsis thalian	0.965	0.949	0.602	7.5e-105
TAIR|locus:2165427	382	DFR "dihydroflavonol 4-reducta	0.913	0.832	0.420	6.5e-67
TAIR|locus:2195733	340	BAN "BANYULS" [Arabidopsis tha	0.931	0.952	0.390	2.3e-55
TAIR|locus:2122093	326	DRL1 "dihydroflavonol 4-reduct	0.896	0.957	0.387	5.6e-52
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.910	0.975	0.380	3.7e-48
TAIR|locus:2050882	364	BEN1 [Arabidopsis thaliana (ta	0.902	0.862	0.356	1.8e-46
TAIR|locus:2012315	322	AT1G09510 [Arabidopsis thalian	0.836	0.903	0.372	2.4e-44
TAIR|locus:2150315	326	AT5G19440 [Arabidopsis thalian	0.908	0.969	0.372	3.9e-44
TAIR|locus:2012265	322	AT1G09490 [Arabidopsis thalian	0.885	0.956	0.343	4.6e-41
TAIR|locus:2012280	325	AT1G09500 [Arabidopsis thalian	0.830	0.889	0.352	9.6e-41

TAIR|locus:2131734 AT4G27250 [Arabidopsis thaliana (taxid:3702)]

 Score = 1038 (370.5 bits), Expect = 7.5e-105, P = 7.5e-105
 Identities = 206/342 (60%), Positives = 263/342 (76%)

Query:     5 EESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIF-SKWTRSDRLRLF 63
             EES  ++ T+CVTGA+GYIGSWLVK+LL+RGY VHAT+RD  K + F SKW  ++RLRLF
Sbjct:     6 EES--KTATYCVTGASGYIGSWLVKSLLQRGYTVHATLRDLAKSEYFQSKWKENERLRLF 63

Query:    64 QADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKD-NIETYVQSTVINPAIQSTLNLLKA 122
             +ADL+ +GSFD AV GCDGVFHVAASMEFDI+    N+E+YVQS VI PA++   N+L +
Sbjct:    64 RADLRDDGSFDDAVKGCDGVFHVAASMEFDISSDHVNLESYVQSKVIEPALKGVRNVLSS 123

Query:   123 CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLS 182
             CLKS+SVKRVV TSS+ST+TAKD +   R  VDE+C+  + HV   +ASGW+YVLSKL+S
Sbjct:   124 CLKSKSVKRVVFTSSISTLTAKDENERMRSFVDETCKAHVDHVLKTQASGWIYVLSKLVS 183

Query:   183 EETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRM 242
             EE AF++A E  +DLVSVITTTV+GPFLT  VPSS+QVLLSPITGDSK F+ILS+V+ RM
Sbjct:   184 EEEAFRYAKERGMDLVSVITTTVSGPFLTPFVPSSVQVLLSPITGDSKLFAILSAVNKRM 243

Query:   243 GSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEF-IDHLKLEYPSSKMQTFEGE 301
             GSIALVHIEDIC AH+FLME  +A+GQYICCV +  + E  + H   +Y     +  E E
Sbjct:   244 GSIALVHIEDICRAHLFLMEQPKAKGQYICCVDNIDMHELMLHHFSKDYLCKVQKVNEDE 303

Query:   302 NQSS-VPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGF 342
              +   +  +ISS+KL++LGF YK+GIE+I+ QTI + +   F
Sbjct:   304 EERECMKPIISSKKLRELGFEYKYGIEEIVDQTIDASIKIKF 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009062 "fatty acid catabolic process" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2165427 DFR "dihydroflavonol 4-reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
 Identities = 143/340 (42%), Positives = 211/340 (62%)

Query:    10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQA 65
             + +T CVTGA+G+IGSWLV  LLERGY V ATVRDPG L+    +         L L++A
Sbjct:     4 QKETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKA 63

Query:    66 DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
             DL  EGS+D A+ GCDGVFHVA  M+F+   KD      ++ VI P +   L ++KAC+K
Sbjct:    64 DLSEEGSYDDAINGCDGVFHVATPMDFES--KDP-----ENEVIKPTVNGMLGIMKACVK 116

Query:   126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEET 185
             +++V+R V TSS  T+  ++     + V DE+  + +  + +KK +GW+Y +SK L+E+ 
Sbjct:   117 AKTVRRFVFTSSAGTVNVEEHQ---KNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKA 173

Query:   186 AFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI 245
             A+ FA E  +D +S+I T V GPF+T+S+P S+   LSPIT +   +SI+     R G  
Sbjct:   174 AWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSII-----RQGQY 228

Query:   246 ALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKM-QTFEGENQS 304
               VH++D+CNAHIFL E   A+G+YIC      I      L+ +YP   +  TFEG +++
Sbjct:   229 --VHLDDLCNAHIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPSTFEGVDEN 286

Query:   305 SVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP 344
                   SS+KL D+GFN+K+ +E++  ++I +C   GFLP
Sbjct:   287 LKSIEFSSKKLTDMGFNFKYSLEEMFIESIETCRQKGFLP 326

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042406 "extrinsic to endoplasmic reticulum membrane" evidence=TAS

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA;IMP;TAS

GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=IMP;TAS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2195733 BAN "BANYULS" [Arabidopsis thaliana (taxid:3702)]

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 132/338 (39%), Positives = 199/338 (58%)

Query:     1 MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG---KLQIFSKWTRS 57
             M++    TG SK  CV G  G + S L+K LL+ GY V+ TVRDP    K+    K    
Sbjct:     1 MDQTLTHTG-SKKACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQEL 59

Query:    58 DRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTL 117
               L++F+ADL  E SF+ +  GC+ +FHVA  + F    +D      +  +I PAIQ  +
Sbjct:    60 GDLKIFKADLTDEDSFESSFSGCEYIFHVATPINF--KSEDP-----EKDMIKPAIQGVI 112

Query:   118 NLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVL 177
             N+LK+CLKS+SVKRV+ TSS + ++  + SG    V++E   T +  +  +K   W Y +
Sbjct:   113 NVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGI-VMNEENWTDVEFLTEEKPFNWGYPI 171

Query:   178 SKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS 237
             SK+L+E+TA++FA ENKI+LV+VI   +AG  L S  PSS+ + +S ITG     + L  
Sbjct:   172 SKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKE 231

Query:   238 VSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQT 297
             +    GSI+ VH++D+  AH+FL E + A G+YICC  +  + E  D L   YP   + +
Sbjct:   232 MQKLSGSISFVHVDDLARAHLFLAEKETASGRYICCAYNTSVPEIADFLIQRYPKYNVLS 291

Query:   298 FEGENQSSVPSV-ISSEKLKDLGFNYKHGIEDIICQTI 334
              E E   S+P + +SS+KL + GF +++GI ++  Q I
Sbjct:   292 -EFEEGLSIPKLTLSSQKLINEGFRFEYGINEMYDQMI 328

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0033729 "anthocyanidin reductase activity" evidence=IDA

GO:0009964 "negative regulation of flavonoid biosynthetic process" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=ISS

TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 131/338 (38%), Positives = 193/338 (57%)

Query:    15 CVTGANGYIGSWLVKTLLERGYIVHATVRDPG-KLQIFSKWT---RSDRLRLFQADLQVE 70
             CVTGA+G++ SWLVK LL  GY V  TVRDPG + ++   W      +RLRL +ADL  E
Sbjct:     9 CVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWKLEGAKERLRLVKADLMEE 68

Query:    71 GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
             GSFD A+MGC GVFH A+ +   +    N E      ++ PAI+ TLN+L++C K+ S+K
Sbjct:    69 GSFDNAIMGCQGVFHTASPV---LKPTSNPE----EEILRPAIEGTLNVLRSCRKNPSLK 121

Query:   131 RVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFA 190
             RVVLTSS ST+  +D      P+ DES  T +     K+   W Y LSK L+E+ A+KF+
Sbjct:   122 RVVLTSSSSTVRIRDDFDPKIPL-DESIWTSVELC--KRFQVW-YALSKTLAEQAAWKFS 177

Query:   191 NENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI 250
              EN IDLV+V+ + + GP L   + S+   +L  + G+++ F          G +  VHI
Sbjct:   178 EENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETEKFQW-------HGQMGYVHI 230

Query:   251 EDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKM-QTFEGENQSSVPSV 309
             +D+   HI + E++ AQG+YIC      + E +  L   YPS  + + FE  N+      
Sbjct:   231 DDVARTHIVVFEHEAAQGRYICSSNVISLEELVSFLSARYPSLPIPKRFEKLNRLHYD-- 288

Query:   310 ISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPPIL 347
               + K++ LG  +K  +E++    IAS V+ G+L  +L
Sbjct:   289 FDTSKIQSLGLKFK-SLEEMFDDCIASLVEQGYLSTVL 325

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 130/342 (38%), Positives = 190/342 (55%)

Query:     7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG---KLQ-IFSKWTRSDRLRL 62
             S+   KT CVTGA+GYI SW+VK LL RGY V A+VRDP    K + + +     +RL+L
Sbjct:     2 SSEEEKTVCVTGASGYIASWIVKLLLLRGYTVKASVRDPNDPRKTEHLLALEGAEERLKL 61

Query:    63 FQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA 122
             F+A+L  EGSFD A+ GC+GVFH A+    D  VKD      Q+ +++PA++ T+N+L +
Sbjct:    62 FKANLLEEGSFDSAIDGCEGVFHTASPFYHD--VKDP-----QAELLDPAVKGTINVLSS 114

Query:   123 CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLS 182
             CLK+ SVKRVVLTSS++ +           +VDE+      +    K   W YVLSK L+
Sbjct:   115 CLKTSSVKRVVLTSSIAAVAFNGMPRTPETIVDETWFADPDYCRASKL--W-YVLSKTLA 171

Query:   183 EETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRM 242
             E  A+KFA EN + LVS+    V GP L  ++ +S   +LS I G   F        N  
Sbjct:   172 ENAAWKFAKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTF-------PN-- 222

Query:   243 GSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGEN 302
              +   V+++D+ NAHI   EN  A G+Y    +    SE ++ L   YP  ++     + 
Sbjct:   223 ATFGWVNVKDVANAHIQAFENPDADGRYCLVERVAHYSEVVNILHDLYPDFQLPEKCADE 282

Query:   303 QSSVPSV-ISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFL 343
             +  +P+  +S EK + LG  +   +E  I +T+ S  D GF+
Sbjct:   283 KIYIPTYKVSKEKAESLGVEFVP-LEVSIKETVESLRDKGFI 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2050882 BEN1 [Arabidopsis thaliana (taxid:3702)]

 Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
 Identities = 121/339 (35%), Positives = 187/339 (55%)

Query:    15 CVTGANGYIGSWLVKTLLERGYIVHATVR--DPGKLQIFSKWTR----SDRLRLFQADLQ 68
             CVTG +G++ SWL+  LL+RGY V ATVR    G  +  S  T     S+RL++F ADL 
Sbjct:    41 CVTGGSGFVASWLIMRLLQRGYSVRATVRTNSEGNKKDISYLTELPFASERLQIFTADLN 100

Query:    69 VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
                SF  A+ GC  VFHVA  M+ + N     ET  + TV    +Q  + +LK+CL +++
Sbjct:   101 EPESFKPAIEGCKAVFHVAHPMDPNSN-----ET--EETVTKRTVQGLMGILKSCLDAKT 153

Query:   129 VKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKAS--GWVYVLSKLLSEETA 186
             VKR   TSS  T+     +G     VDES  + +    N+K       YV+SK+ +E  A
Sbjct:   154 VKRFFYTSSAVTVFYSGGNGGGGGEVDESVWSDVEVFRNQKEKRVSSSYVVSKMAAETAA 213

Query:   187 FKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIA 246
              +F  +N +++V+++   V GPF++SS+PSS+ + L+ + G+ K   +  + +       
Sbjct:   214 LEFGGKNGLEVVTLVIPLVVGPFISSSLPSSVFISLAMLFGNYKEKYLFDTYN------- 266

Query:   247 LVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSV 306
             +VHI+D+  A IFL+E   A+G+YIC      I E  + L  ++P  ++ + +  N+  V
Sbjct:   267 MVHIDDVARAMIFLLEKPVAKGRYICSSVEMKIDEVFEFLSTKFPQFQLPSID-LNKYKV 325

Query:   307 PSV--ISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFL 343
                  +SS+KLK  GF +K+G E+I    I SC   GFL
Sbjct:   326 EKRMGLSSKKLKSAGFEFKYGAEEIFSGAIRSCQARGFL 364

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009813 "flavonoid biosynthetic process" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0010422 "regulation of brassinosteroid biosynthetic process" evidence=IMP

GO:0016131 "brassinosteroid metabolic process" evidence=IMP

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)]

 Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
 Identities = 118/317 (37%), Positives = 175/317 (55%)

Query:    12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG---KLQ-IFSKWTRSDRLRLFQADL 67
             K  CVTGA+GY+ SW+VK LL RGY V ATVRDP    K + + +     ++L+LF+ADL
Sbjct:     6 KMVCVTGASGYVASWIVKLLLLRGYTVRATVRDPSDEKKTEHLLALDGAKEKLKLFKADL 65

Query:    68 QVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE 127
               EGSF++A+ GCD VFH A+ +   +       T  Q  +I+PA++ TLN+LK C K  
Sbjct:    66 LEEGSFEQAIEGCDAVFHTASPVSLTV-------TDPQIELIDPAVKGTLNVLKTCAKVS 118

Query:   128 SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAF 187
             SVKRV++TSS++ +  ++ +     +VDESC +  +    KK   W Y LSK L+E+ A+
Sbjct:   119 SVKRVIVTSSMAAVLFREPTLGPNDLVDESCFSDPNFCTEKKL--W-YALSKTLAEDEAW 175

Query:   188 KFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIAL 247
             +FA E  +DLV +    V GP L  S+  S+ V++  ITG   F        N+     L
Sbjct:   176 RFAKEKGLDLVVINPGLVLGPLLKPSLTFSVNVIVELITGKDNFI-------NK--DFRL 226

Query:   248 VHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVP 307
             V + D+  AHI   E   A G+YI       I++    L+  +P   +   +GE    +P
Sbjct:   227 VDVRDVALAHIKAFETPSANGRYIIEGPVVTINDIEKILREFFPDLNLGN-KGEASEIIP 285

Query:   308 SV--ISSEKLKDLGFNY 322
              +  +  EK+K LG  +
Sbjct:   286 VIYKLCVEKVKSLGIEF 302

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)]

 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 127/341 (37%), Positives = 188/341 (55%)

Query:     7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG---KLQ-IFSKWTRSDRLRL 62
             ++G  K  CVTGA+GYI SWLVK LL RGY V A+VRDP    K Q + S     +RL L
Sbjct:     3 NSGEGKVVCVTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQHLVSLEGAKERLHL 62

Query:    63 FQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA 122
             F+ADL  +GSFD A+ GC GVFH A+   F+ + KD      Q+ +I+PA++ TLN+L +
Sbjct:    63 FKADLLEQGSFDSAIDGCHGVFHTASPF-FN-DAKDP-----QAELIDPAVKGTLNVLNS 115

Query:   123 CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLS 182
             C K+ SVKRVV+TSS++ +            VDE+  +        K   W YVLSK L+
Sbjct:   116 CAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETWFSDPELCEASKM--W-YVLSKTLA 172

Query:   183 EETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRM 242
             E+ A+K A E  +D+V++    V GP L  ++ +S   +L+ I G +K F  LS      
Sbjct:   173 EDAAWKLAKEKGLDIVTINPAMVIGPLLQPTLNTSAAAILNLING-AKTFPNLS------ 225

Query:   243 GSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGEN 302
                  V+++D+ NAHI   E   A G+Y    +    SE ++ L+  YP+  +     + 
Sbjct:   226 --FGWVNVKDVANAHIQAFEVPSANGRYCLVERVVHHSEIVNILRELYPNLPLPERCVDE 283

Query:   303 QSSVPSV-ISSEKLKDLGFNYKHGIEDIICQTIASCVDCGF 342
                VP+  +S +K + LG +Y   ++  I +T+ S  + GF
Sbjct:   284 NPYVPTYQVSKDKTRSLGIDYIP-LKVSIKETVESLKEKGF 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2012265 AT1G09490 [Arabidopsis thaliana (taxid:3702)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 115/335 (34%), Positives = 183/335 (54%)

Query:    12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG---KLQ-IFSKWTRSDRLRLFQADL 67
             K  CVTGA+GYI SW+VK LL RGY V+ATVRDP    K + + +     +RL+LF+ADL
Sbjct:     6 KVVCVTGASGYIASWIVKLLLLRGYTVNATVRDPKDKKKTEHLLALDGAKERLKLFKADL 65

Query:    68 QVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE 127
               E SFD+A+ GCD VFH A+ + F +       T  Q+ +I+PA++ T+N+L  C +  
Sbjct:    66 LEESSFDQAIDGCDAVFHTASPVLFTV-------TDPQTELIDPALKGTINVLNTCKQVS 118

Query:   128 SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAF 187
             SVKRV+LTSS + + ++        +VDE+  +       ++   W Y LSK+L+E  A+
Sbjct:   119 SVKRVILTSSTAAVLSRQPPIGPNDLVDETFFSDPSLC--RETKNW-YSLSKILAENAAW 175

Query:   188 KFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIAL 247
             +FA +N ID+V +    + GP L  ++  S+++++  I G + F       S+ +  +AL
Sbjct:   176 QFAKDNGIDMVVLNPGFICGPLLQPTLNMSVELIVDFINGKNPFNKRYYRFSD-VRDVAL 234

Query:   248 VHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPS-SKMQTFEGENQSSV 306
             VHI+         +E   A G+YI    +  +++ ID L+  +P  S   T E    + +
Sbjct:   235 VHIK--------ALETPSANGRYIIDGPNMSVNDIIDILRKLFPDLSIADTNEESEMNEM 286

Query:   307 PSVISSEKLKDLGFNY---KHGIEDIICQTIASCV 338
                +  EK+K+LG  +   K  + D I      C+
Sbjct:   287 ICQVCVEKVKNLGVEFTPMKSSLRDTIVSLKEKCL 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2012280 AT1G09500 [Arabidopsis thaliana (taxid:3702)]

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 111/315 (35%), Positives = 175/315 (55%)

Query:    12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQADL 67
             K  CVTGA+GYI SW+VK LL RGY ++ATVRDP   +    + +     +RL+LF+ADL
Sbjct:     6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADL 65

Query:    68 QVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE 127
               EGSF+ A+ GC+ VFH A+ +   +     +E      +INPA+  T+N+L+ C K  
Sbjct:    66 LDEGSFELAIDGCETVFHTASPVAITVKTDPQVE------LINPAVNGTINVLRTCTKVS 119

Query:   128 SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAF 187
             SVKRV+LTSS++ + A ++      VVDE+  T       +K   W YVLSK L+E+ A+
Sbjct:   120 SVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ--W-YVLSKTLAEDAAW 176

Query:   188 KFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIAL 247
             +FA +N+IDL+ +    V GP L  ++  S+ V++  + G + F    ++  +R      
Sbjct:   177 RFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF----NTTHHRF----- 227

Query:   248 VHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVP 307
             V + D+  AH+  +E   A G+YI       I +  + L+  +P   +     E+ + + 
Sbjct:   228 VDVRDVALAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIAD-RNEDITELN 286

Query:   308 SV---ISSEKLKDLG 319
             SV   +  +K+K LG
Sbjct:   287 SVTFNVCLDKVKSLG 301

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00027441001 SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (402 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	348
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	0.0
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-128
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	1e-100
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	5e-85
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	7e-84
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	1e-70
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	3e-53
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	7e-52
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	3e-48
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	6e-43
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	6e-35
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	7e-34
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	2e-28
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-28
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-26
cd08946	200	cd08946, SDR_e, extended (e) SDRs	8e-21
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	9e-20
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-17
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	7e-14
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	2e-13
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-13
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	6e-13
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	2e-11
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	3e-11
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	3e-11
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	4e-11
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	9e-11
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	1e-10
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	3e-10
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	3e-10
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	3e-10
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	5e-10
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	7e-10
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-09
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	2e-09
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	3e-09
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	4e-09
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	5e-09
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	5e-09
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	9e-09
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	1e-08
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	1e-08
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	2e-08
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	2e-08
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-08
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	8e-08
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	2e-07
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	2e-07
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-07
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	3e-07
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	4e-07
cd05233	234	cd05233, SDR_c, classical (c) SDRs	4e-07
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	5e-07
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	5e-07
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	7e-07
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	1e-06
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	1e-06
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	2e-06
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	3e-06
pfam05368	232	pfam05368, NmrA, NmrA-like family	3e-06
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	4e-06
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	5e-06
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	9e-06
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	1e-05
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-05
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	2e-05
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	4e-05
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	4e-05
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	5e-05
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	8e-05
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	1e-04
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	1e-04
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	1e-04
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-04
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	3e-04
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	3e-04
COG2910	211	COG2910, COG2910, Putative NADH-flavin reductase [	4e-04
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	5e-04
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	6e-04
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	7e-04
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	8e-04
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	9e-04
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	0.001
TIGR02197	314	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep	0.001
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	0.002
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	0.002
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	0.003

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  571 bits (1473), Expect = 0.0
 Identities = 247/346 (71%), Positives = 285/346 (82%), Gaps = 3/346 (0%)

Query: 2   EKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ-IFSKWTRSDRL 60
            + E     + T+CVTGA GYIGSWLVK LL+RGY VHAT+RDP K   + SKW   DRL
Sbjct: 1   MELEGRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRL 60

Query: 61  RLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKD-NIETYVQSTVINPAIQSTLNL 119
           RLF+ADLQ EGSFD+AV GCDGVFHVAASMEFD++    NIE YVQS VI+PAI+ TLN+
Sbjct: 61  RLFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNV 120

Query: 120 LKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSK 179
           LK+CLKS++VKRVV TSS+ST+TAKDS+G WR VVDE+CQTPI HVWN KASGWVYVLSK
Sbjct: 121 LKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSK 180

Query: 180 LLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVS 239
           LL+EE AFK+A EN IDLVSVITTTVAGPFLT SVPSSIQVLLSPITGDSK FSILS+V+
Sbjct: 181 LLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVN 240

Query: 240 NRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFE 299
           +RMGSIALVHIEDIC+AHIFLME  +A+G+YICCV S  +SE I+HL  EYP S +Q   
Sbjct: 241 SRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQVRL 300

Query: 300 -GENQSSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP 344
             E + S+PS ISS+KL+DLGF YK+GIE+II QTI  CVD GFLP
Sbjct: 301 DEEKRGSIPSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVDHGFLP 346

Length = 353

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  368 bits (948), Expect = e-128
 Identities = 138/311 (44%), Positives = 190/311 (61%), Gaps = 24/311 (7%)

Query: 15  CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTR----SDRLRLFQADLQVE 70
           CVTGA+G+IGSWLVK LL+RGY V ATVRDPG  +  +         +RL+LF+ADL   
Sbjct: 2   CVTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLDY 61

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
           GSFD A+ GCDGVFHVA+ ++FD           +  +I PA++ TLN+L+AC K++SVK
Sbjct: 62  GSFDAAIDGCDGVFHVASPVDFDS-------EDPEEEMIEPAVKGTLNVLEACAKAKSVK 114

Query: 131 RVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFA 190
           RVV TSSV+ +    + GE   VVDESC + +      K +   Y LSK L+E+ A++FA
Sbjct: 115 RVVFTSSVAAVVWNPNRGEG-KVVDESCWSDLDFC---KKTKLWYALSKTLAEKAAWEFA 170

Query: 191 NENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI 250
            EN +DLV+V  + V GPFL  S+ SS Q++LS + G+++ +          GS+ALVH+
Sbjct: 171 EENGLDLVTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEMYQN--------GSLALVHV 222

Query: 251 EDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQT-FEGENQSSVPSV 309
           +D+ +AHI L E   A G+YIC        E    L  +YP   + T FE +        
Sbjct: 223 DDVADAHILLYEKPSASGRYICSSHVVTRPELAALLAKKYPQYNIPTKFEDDQPGVARVK 282

Query: 310 ISSEKLKDLGF 320
           +SS+KLKDLGF
Sbjct: 283 LSSKKLKDLGF 293

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  300 bits (771), Expect = e-100
 Identities = 140/343 (40%), Positives = 206/343 (60%), Gaps = 24/343 (6%)

Query: 9   GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQ 64
            + +T CVTGA+G+IGSWLV  LLERGY V ATVRDP  ++    +      + RL L++
Sbjct: 3   SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWK 62

Query: 65  ADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL 124
           ADL VEGSFD A+ GC GVFHVA  M+F+    +N        VI P +   L+++KAC 
Sbjct: 63  ADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPEN-------EVIKPTVNGMLSIMKACA 115

Query: 125 KSESVKRVVLTSSVSTITAKDSSGEWR-PVVDESCQTPIHHVWNKKASGWVYVLSKLLSE 183
           K+++V+R+V TSS  T+  +    E + PV DE C + +     KK +GW+Y +SK L+E
Sbjct: 116 KAKTVRRIVFTSSAGTVNVE----EHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAE 171

Query: 184 ETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMG 243
           + A+K+A EN +D +S+I T V GPF+++S+P S+   LS ITG+   +SI+        
Sbjct: 172 KAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQ---- 227

Query: 244 SIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKM-QTFEGEN 302
               VH++D+CNAHIFL E+  A+G+YIC      I +    L+ +YP   +   F G +
Sbjct: 228 ---FVHLDDLCNAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPGID 284

Query: 303 QSSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPP 345
           +       SS+KL DLGF +K+ +ED+    I +C + G +P 
Sbjct: 285 EDLKSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLIPL 327

Length = 351

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  260 bits (665), Expect = 5e-85
 Identities = 136/327 (41%), Positives = 194/327 (59%), Gaps = 11/327 (3%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP---GKLQIFSKWTRSDRLRLFQADL 67
            KT CV G  G++ S L+K LL++GY V+ TVRDP    K+           L++F ADL
Sbjct: 9   KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADL 68

Query: 68  QVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE 127
             E SF+  + GCD VFHVA  + F     +N        +I PAIQ   N+LKAC K++
Sbjct: 69  TDEESFEAPIAGCDLVFHVATPVNFASEDPEN-------DMIKPAIQGVHNVLKACAKAK 121

Query: 128 SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAF 187
           SVKRV+LTSS + ++    SG    V++E   T +  + ++K   W Y  SK L+E+ A+
Sbjct: 122 SVKRVILTSSAAAVSINKLSGTGL-VMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAW 180

Query: 188 KFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIAL 247
           KFA EN IDL++VI T +AGP LTS +PSS+ + +S ITG+    + L  +    GSI++
Sbjct: 181 KFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISI 240

Query: 248 VHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVP 307
            H+ED+C AHIFL E + A G+YICC  +  + E    L   YP  ++ T  G+  S   
Sbjct: 241 THVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTDFGDFPSKAK 300

Query: 308 SVISSEKLKDLGFNYKHGIEDIICQTI 334
            +ISSEKL   GF++++GIE+I  QT+
Sbjct: 301 LIISSEKLISEGFSFEYGIEEIYDQTV 327

Length = 338

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  256 bits (654), Expect = 7e-84
 Identities = 125/309 (40%), Positives = 165/309 (53%), Gaps = 20/309 (6%)

Query: 15  CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSD----RLRLFQADLQVE 70
            VTGA+G++ S +V+ LLERGY V ATVRDP K++  +     D    RL L  ADL  E
Sbjct: 2   LVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTDE 61

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
            SFD+ + GC GVFHVA  + F    KD  E      VI PAI  TLN LKA   ++SVK
Sbjct: 62  QSFDEVIKGCAGVFHVATPVSFS--SKDPNE------VIKPAIGGTLNALKAAAAAKSVK 113

Query: 131 RVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFA 190
           R VLTSS  ++     + E   V+DE          + K S WVY  SK L+E+ A+KFA
Sbjct: 114 RFVLTSSAGSVLIPKPNVEG-IVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFA 172

Query: 191 NENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI 250
           +EN IDL++VI T   G    S  PSS    +S ITG+      L+ +         VH+
Sbjct: 173 DENNIDLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALI----PPGYYVHV 228

Query: 251 EDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQT-FEGENQSSVPSV 309
            DIC AHI  +E   A+G+YIC   +   +  +  L+ +YPS    T F  + Q    S 
Sbjct: 229 VDICLAHIGCLELPIARGRYICTAGNFDWNTLLKTLRKKYPSYTFPTDFPDQGQDL--SK 286

Query: 310 ISSEKLKDL 318
            SS KL ++
Sbjct: 287 FSSAKLLEI 295

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  223 bits (569), Expect = 1e-70
 Identities = 133/354 (37%), Positives = 188/354 (53%), Gaps = 51/354 (14%)

Query: 8   TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTR--------SDR 59
           +G  K  CVTGA+GYI SWLVK LL+RGY V ATVRDP       K T          +R
Sbjct: 1   SGEGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND----PKKTEHLLALDGAKER 56

Query: 60  LRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNL 119
           L LF+A+L  EGSFD  V GC+GVFH A+    D  V D      Q+ +I+PA++ TLN+
Sbjct: 57  LHLFKANLLEEGSFDSVVDGCEGVFHTASPFYHD--VTDP-----QAELIDPAVKGTLNV 109

Query: 120 LKACLKSESVKRVVLTSSVSTI--TAKDSSGEWRPVVDES-------CQTPIHHVWNKKA 170
           L++C K  SVKRVV+TSS++ +    K  + +   VVDE+       C+     +W    
Sbjct: 110 LRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPD--VVVDETWFSDPAFCEE--SKLW---- 161

Query: 171 SGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK 230
               YVLSK L+EE A+KFA EN ID+V++    V GP L  ++ +S + +L+ I G   
Sbjct: 162 ----YVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT 217

Query: 231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEY 290
           F +          S   V + D+ NAHI   E   A G+Y    +    SE +  L   Y
Sbjct: 218 FPN---------ASYRWVDVRDVANAHIQAFEIPSASGRYCLVERVVHYSEVVKILHELY 268

Query: 291 PSSKMQTFEGENQSSVPSV-ISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFL 343
           P+ ++     +++  VP+  +S EK K LG  +   +E  +  T+ S  + GFL
Sbjct: 269 PTLQLPEKCADDKPYVPTYQVSKEKAKSLGIEFI-PLEVSLKDTVESLKEKGFL 321

Length = 322

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  177 bits (451), Expect = 3e-53
 Identities = 91/317 (28%), Positives = 141/317 (44%), Gaps = 35/317 (11%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGK----LQIFSKWTRSDRLRLFQADLQ-VE 70
           VTGA G+I S +V+ LL+ GY V  TVR   K      +      +DRL     D     
Sbjct: 4   VTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDLTAP 63

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
            ++D+A+ G D V HVA+   F            +  VI+PA++ TLN+L+A   + SVK
Sbjct: 64  NAWDEALKGVDYVIHVASPFPFT-------GPDAEDDVIDPAVEGTLNVLEAAKAAGSVK 116

Query: 131 RVVLTSSVSTI---TAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAF 187
           RVVLTSSV+ +   TA+D       V  E     +    +K      Y+ SK L+E+ A+
Sbjct: 117 RVVLTSSVAAVGDPTAEDPG----KVFTEEDWNDL--TISKSNGLDAYIASKTLAEKAAW 170

Query: 188 KFANENK--IDLVSVITTTVAGP-FLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS 244
           +F  ENK   +L+++    V GP  L   + SS +++   + G            N    
Sbjct: 171 EFVKENKPKFELITINPGYVLGPSLLADELNSSNELINKLLDGKLPAI-----PPNLPFG 225

Query: 245 IALVHIEDICNAHIFLMENDRAQGQ--YICCVKSCPISEFIDHLKLEYPSSKMQTFEGEN 302
              V + D+ +AH+  +E+  A GQ   +         E  D L+ E+P           
Sbjct: 226 Y--VDVRDVADAHVRALESPEAAGQRFIVSAGPFSF-QEIADLLREEFPQLTAPFPAPNP 282

Query: 303 QS-SVPSVISSEKLKDL 318
              S+     + K ++L
Sbjct: 283 LMLSILVKFDNRKSEEL 299

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  174 bits (442), Expect = 7e-52
 Identities = 116/338 (34%), Positives = 183/338 (54%), Gaps = 27/338 (7%)

Query: 9   GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQ 64
           G  K  CVTGA+GYI SW+VK LL RGY V ATVRD    +    + +     +RL+LF+
Sbjct: 3   GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFK 62

Query: 65  ADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL 124
           ADL  E SF++A+ GCD VFH A+ + F   VKD      Q+ +I+PA++ T+N+L  C 
Sbjct: 63  ADLLEESSFEQAIEGCDAVFHTASPVFF--TVKDP-----QTELIDPALKGTINVLNTCK 115

Query: 125 KSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEE 184
           ++ SVKRV+LTSS + +  +    E   VVDE+  +       ++   W Y LSK+L+E 
Sbjct: 116 ETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLC--RETKNW-YPLSKILAEN 172

Query: 185 TAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS 244
            A++FA +N ID+V +    + GP L  ++  S+++++  I G + F       +NR   
Sbjct: 173 AAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLF-------NNRF-- 223

Query: 245 IALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQ- 303
              V + D+  AHI  +E   A G+YI       +++ ID L+  +P   +     E++ 
Sbjct: 224 YRFVDVRDVALAHIKALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESEM 283

Query: 304 SSVPSVISSEKLKDLGFNY---KHGIEDIICQTIASCV 338
           + +   +  EK+K+LG  +   K  + D I      C+
Sbjct: 284 NEMICKVCVEKVKNLGVEFTPMKSSLRDTILSLKEKCL 321

Length = 322

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  164 bits (417), Expect = 3e-48
 Identities = 101/264 (38%), Positives = 154/264 (58%), Gaps = 22/264 (8%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQADL 67
           K  CVTGA+GYI SW+VK LL RGY ++ATVRDP   +    + +     +RL+LF+ADL
Sbjct: 6   KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADL 65

Query: 68  QVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE 127
             EGSF+ A+ GC+ VFH A+ +   +     +E      +INPA+  T+N+L+ C K  
Sbjct: 66  LDEGSFELAIDGCETVFHTASPVAITVKTDPQVE------LINPAVNGTINVLRTCTKVS 119

Query: 128 SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAF 187
           SVKRV+LTSS++ + A ++      VVDE+  T       +K   W YVLSK L+E+ A+
Sbjct: 120 SVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ--W-YVLSKTLAEDAAW 176

Query: 188 KFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIAL 247
           +FA +N+IDL+ +    V GP L  ++  S+ V++  + G + F    ++  +R      
Sbjct: 177 RFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF----NTTHHR-----F 227

Query: 248 VHIEDICNAHIFLMENDRAQGQYI 271
           V + D+  AH+  +E   A G+YI
Sbjct: 228 VDVRDVALAHVKALETPSANGRYI 251

Length = 325

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  151 bits (382), Expect = 6e-43
 Identities = 106/316 (33%), Positives = 165/316 (52%), Gaps = 29/316 (9%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVR---DPGKLQIFSKWTRSDRLRLFQADLQ 68
           KT CVTGA GYI SW+VK LLERGY V  TVR   DP    +       +RL L +ADLQ
Sbjct: 11  KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQ 70

Query: 69  VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
              +   A+ GCDGVFH A+       V D+ E  V+     PA+     ++ A  +++ 
Sbjct: 71  DYEALKAAIDGCDGVFHTASP------VTDDPEQMVE-----PAVNGAKFVINAAAEAK- 118

Query: 129 VKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFK 188
           VKRVV+TSS+  +   D + +   VVDESC + +    N K   W Y   K+++E+ A++
Sbjct: 119 VKRVVITSSIGAVYM-DPNRDPEAVVDESCWSDLDFCKNTK--NW-YCYGKMVAEQAAWE 174

Query: 189 FANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALV 248
            A E  +DLV +    V GP L  ++ +S+  +L  +TG +K ++ L+         A V
Sbjct: 175 TAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQ--------AYV 226

Query: 249 HIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQT--FEGENQSSV 306
            + D+  AH+ + E   A G+Y+    +    E ++ L   +P   + T   + +N  + 
Sbjct: 227 DVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAK 286

Query: 307 PSVISSEKLKDLGFNY 322
           P   +++K+KDLG  +
Sbjct: 287 PYKFTNQKIKDLGLEF 302

Length = 342

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  129 bits (326), Expect = 6e-35
 Identities = 68/324 (20%), Positives = 114/324 (35%), Gaps = 36/324 (11%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           VTG  G+IGS LV+ LL  G+ V    R    L           +     DL      D+
Sbjct: 5   VTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLD-----PLLSGVEFVVLDLTDRDLVDE 59

Query: 76  AVMGC-DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL 134
              G  D V H+AA      +   +   ++    +N  +  TLNLL+A   +  VKR V 
Sbjct: 60  LAKGVPDAVIHLAAQSSVPDSNASDPAEFLD---VN--VDGTLNLLEAARAA-GVKRFVF 113

Query: 135 TSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENK 194
            SSVS +            +DE    P             Y +SKL +E+    +A    
Sbjct: 114 ASSVSVV----YGDPPPLPIDEDLGPP--------RPLNPYGVSKLAAEQLLRAYARLYG 161

Query: 195 IDLVSVITTTVAGPFLTSSVPSS-IQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDI 253
           + +V +    V GP     + S  +   +  +        I    S        V+++D+
Sbjct: 162 LPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRD---FVYVDDV 218

Query: 254 CNAHIFLMENDRAQGQYICC--VKSCPISEFID----HLKLEYPSSKMQTFEGENQSSVP 307
            +A +  +EN    G +          + E  +     +  + P                
Sbjct: 219 ADALLLALENPDG-GVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREG 277

Query: 308 SVISSEKLKD-LGFNYKHGIEDII 330
            ++   K +  LG+  K  +E+ +
Sbjct: 278 KLLDISKARAALGWEPKVSLEEGL 301

Length = 314

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  126 bits (319), Expect = 7e-34
 Identities = 76/261 (29%), Positives = 114/261 (43%), Gaps = 44/261 (16%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           VTGA G++GS LV+ LL +GY V A VR      +         + + + DL    S   
Sbjct: 3   VTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLL----DGLPVEVVEGDLTDAASLAA 58

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
           A+ GCD VFH+AA     +  KD  E Y      N  ++ T N+L A L+   V+RVV T
Sbjct: 59  AMKGCDRVFHLAA--FTSLWAKDRKELY----RTN--VEGTRNVLDAALE-AGVRRVVHT 109

Query: 136 SSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKI 195
           SS++ +            +DE+        WN++     Y  SKLL+E    + A E  +
Sbjct: 110 SSIAALGGPPDG-----RIDETT------PWNERPFPNDYYRSKLLAELEVLEAAAEG-L 157

Query: 196 DLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRM-----GSIALVHI 250
           D+V V  + V GP        +   L            +L  ++ ++     G  + V +
Sbjct: 158 DVVIVNPSAVFGP---GDEGPTSTGLD-----------VLDYLNGKLPAYPPGGTSFVDV 203

Query: 251 EDICNAHIFLMENDRAQGQYI 271
            D+   HI  ME  R   +YI
Sbjct: 204 RDVAEGHIAAMEKGRRGERYI 224

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score =  111 bits (280), Expect = 2e-28
 Identities = 75/266 (28%), Positives = 134/266 (50%), Gaps = 31/266 (11%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKW----TRSDRLRLFQAD 66
           SK+ CV  A+GY+G WLVK LL RGY VHA V+  G+ +I  +        +RL++F  D
Sbjct: 6   SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVD 65

Query: 67  LQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS 126
                S   A+ GC G+F          +   +  +Y +  V +  +++  N+L+AC ++
Sbjct: 66  PLDYHSILDALKGCSGLFCC-------FDPPSDYPSYDEKMV-DVEVRAAHNVLEACAQT 117

Query: 127 ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETA 186
           +++++VV TSS++ +  +D +   +  VDE   +  +     K   W + L+K LSE+TA
Sbjct: 118 DTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL--W-HALAKTLSEKTA 174

Query: 187 FKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIA 246
           +  A +  +++VS+    + GP LT   P         + G ++ +          G + 
Sbjct: 175 WALAMDRGVNMVSINAGLLMGPSLTQHNPY--------LKGAAQMYE--------NGVLV 218

Query: 247 LVHIEDICNAHIFLMENDRAQGQYIC 272
            V +  + +AHI   E+  + G+Y+C
Sbjct: 219 TVDVNFLVDAHIRAFEDVSSYGRYLC 244

Length = 297

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score =  112 bits (281), Expect = 2e-28
 Identities = 82/268 (30%), Positives = 122/268 (45%), Gaps = 56/268 (20%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRL-------FQADLQ 68
           VTGA G++GS +V+ LLE+G  V   VR             SDR  L        + DL+
Sbjct: 5   VTGATGFVGSAVVRLLLEQGEEVRVLVRPT-----------SDRRNLEGLDVEIVEGDLR 53

Query: 69  VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
              S  KAV GC  +FHVAA  ++ +   D  E Y  + V     + T NLL+A L+   
Sbjct: 54  DPASLRKAVAGCRALFHVAA--DYRLWAPDPEEMY-AANV-----EGTRNLLRAALE-AG 104

Query: 129 VKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFK 188
           V+RVV TSSV+T+  +   G      DE+  + +         G  Y  SK L+E+ A +
Sbjct: 105 VERVVYTSSVATLGVR-GDGT---PADETTPSSL-----DDMIG-HYKRSKFLAEQAALE 154

Query: 189 FANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS---- 244
            A E  + +V V  +T  GP      P          TG      I+  ++ +M +    
Sbjct: 155 MAAEKGLPVVIVNPSTPIGPRDIKPTP----------TGR----IIVDFLNGKMPAYVDT 200

Query: 245 -IALVHIEDICNAHIFLMENDRAQGQYI 271
            + LVH++D+   H+  +E  R   +YI
Sbjct: 201 GLNLVHVDDVAEGHLLALERGRIGERYI 228

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  105 bits (263), Expect = 2e-26
 Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 41/262 (15%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           VTG  G+IGS LV+ LL+ GY V    R        S+   + R+R  + DL    + ++
Sbjct: 3   VTGGTGFIGSHLVRRLLQEGYEVIVLGRRRR-----SESLNTGRIRFHEGDLTDPDALER 57

Query: 76  AVMGC--DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVV 133
            +     D V H+AA      + +D  +        N  +  TL LL+A  ++  VKR V
Sbjct: 58  LLAEVQPDAVIHLAAQSGVGASFEDPADFI----RAN--VLGTLRLLEAARRAG-VKRFV 110

Query: 134 LTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN 193
             SS S +    +     P+ +++   P+            Y  +KL +E     +A   
Sbjct: 111 FASS-SEVYGDVAD---PPITEDTPLGPLS----------PYAAAKLAAERLVEAYARAY 156

Query: 194 KIDLVSVITTTVAGPFL-----TSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALV 248
            +  V +    V GP       T  +P+ I+ +L     + K   +L   + R      +
Sbjct: 157 GLRAVILRLFNVYGPGNPDPFVTHVIPALIRRIL-----EGKPILLLGDGTQRR---DFL 208

Query: 249 HIEDICNAHIFLMENDRAQGQY 270
           +++D+  A +  +E+      Y
Sbjct: 209 YVDDVARAILLALEHPDGGEIY 230

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 88.5 bits (220), Expect = 8e-21
 Identities = 58/254 (22%), Positives = 87/254 (34%), Gaps = 61/254 (24%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           VTG  G+IGS LV+ LLERG+ V    R                                
Sbjct: 3   VTGGAGFIGSHLVRRLLERGHEVVVIDRL------------------------------- 31

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
                D V H+AA +    +  +  E +      N  +  TLNLL+A  K+  VKR V  
Sbjct: 32  -----DVVVHLAALVGVPASWDNPDEDFE----TN--VVGTLNLLEAARKA-GVKRFVYA 79

Query: 136 SSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKI 195
           SS S       S E  P  +E+   P+            Y +SKL +E     +     +
Sbjct: 80  SSASVY----GSPEGLPEEEETPPRPL----------SPYGVSKLAAEHLLRSYGESYGL 125

Query: 196 DLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICN 255
            +V +    V GP     +   +   +                  R      +H++D+  
Sbjct: 126 PVVILRLANVYGPGQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTR----DFIHVDDVVR 181

Query: 256 AHIFLMENDRAQGQ 269
           A +  +EN    G 
Sbjct: 182 AILHALENPLEGGG 195

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score = 88.7 bits (220), Expect = 9e-20
 Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 33/280 (11%)

Query: 5   EESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQ 64
             +   ++  CVTG   ++G  +V  LL  GY V   V      +   +      +    
Sbjct: 47  AGADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSN 106

Query: 65  -------ADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTL 117
                  A+L    S  +A  GC GVFH +A ++        +  Y +S     A +++ 
Sbjct: 107 DGIWTVMANLTEPESLHEAFDGCAGVFHTSAFVD-----PAGLSGYTKSMAELEA-KASE 160

Query: 118 NLLKACLKSESVKRVVLTSSVSTITAKDS-SGEWRPVVDESCQTPIHHVWNKKASGWVYV 176
           N+++AC+++ESV++ V TSS+     + +   +  PV+DE   +      + K   W Y 
Sbjct: 161 NVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKL--W-YA 217

Query: 177 LSKLLSEETAFKFANENKIDLVSVITTTVAGP-FLTSSVPSSIQVLLSPITGDSKFFSIL 235
           L KL +E+ A++ A    + L ++    V GP F   +  ++I  L     G  +  +  
Sbjct: 218 LGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYL----KGAQEMLA-- 271

Query: 236 SSVSNRMGSIALVHIEDICNAHIFL---MENDRAQGQYIC 272
                  G +A   +E +  AH+ +   M N  A G+YIC
Sbjct: 272 ------DGLLATADVERLAEAHVCVYEAMGNKTAFGRYIC 305

Length = 367

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 81.1 bits (201), Expect = 2e-17
 Identities = 82/344 (23%), Positives = 127/344 (36%), Gaps = 71/344 (20%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWT---RSDRLRLFQADLQVEGS 72
           VTG  G+IGS LV+ LLERG+ V   V D   L    K         ++  + D++ +  
Sbjct: 4   VTGGAGFIGSHLVERLLERGHEVI--VLD--NLSTGKKENLPEVKPNVKFIEGDIRDDEL 59

Query: 73  FDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRV 132
            + A  G D VFH AA      +++D I    +  V+      TLNLL+A  K+  VKR 
Sbjct: 60  VEFAFEGVDYVFHQAAQASVPRSIEDPI-KDHEVNVL-----GTLNLLEAARKAG-VKRF 112

Query: 133 VLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE 192
           V  SS S            P  ++    P+            Y +SK   E     FA  
Sbjct: 113 VYASSSSVYGDPPY----LPKDEDHPPNPLSP----------YAVSKYAGELYCQVFARL 158

Query: 193 NKIDLVSVITTTVAGPFLTSSVPSS---------IQVLLS----PITGDSK----FFSIL 235
             +  VS+    V GP      P+          I+  L      I GD +    F    
Sbjct: 159 YGLPTVSLRYFNVYGP---RQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDF---- 211

Query: 236 SSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQY-ICCVKSCPISEFIDHLK--LEYPS 292
                        ++ED+  A++           Y I   K   ++E  + ++  L    
Sbjct: 212 ------------TYVEDVVEANLLAATAGAGGEVYNIGTGKRTSVNELAELIREILGKEL 259

Query: 293 SKMQT--FEGENQSSVPSVISSEKLKDLGFNYKHGIEDIICQTI 334
             +      G+ + S+     S+  K LG+  K   E+ +  T+
Sbjct: 260 EPVYAPPRPGDVRHSLAD--ISKAKKLLGWEPKVSFEEGLRLTV 301

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 70.8 bits (174), Expect = 7e-14
 Identities = 50/202 (24%), Positives = 78/202 (38%), Gaps = 36/202 (17%)

Query: 15  CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSD-----RLRLFQADLQV 69
            VTGA+G+IGS L + LL  G+ V A          F+ W   D     R      D++ 
Sbjct: 3   LVTGADGFIGSHLTERLLREGHEVRALD----IYNSFNSWGLLDNAVHDRFHFISGDVRD 58

Query: 70  EGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQS--TVINPAIQSTLNLLKACLKSE 127
               +  V  CD VFH+AA +         I     +  + +   +  TLN+L+A     
Sbjct: 59  ASEVEYLVKKCDVVFHLAALI--------AIPYSYTAPLSYVETNVFGTLNVLEAACV-L 109

Query: 128 SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAF 187
             KRVV TS+         + +  P +DE      H +         Y  SK  ++  A+
Sbjct: 110 YRKRVVHTSTSEVY----GTAQDVP-IDED-----HPLLYINKPRSPYSASKQGADRLAY 159

Query: 188 KFANENKIDLVSVITTTVAGPF 209
            +     + +      T+  PF
Sbjct: 160 SYGRSFGLPV------TIIRPF 175

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 32/125 (25%), Positives = 46/125 (36%), Gaps = 27/125 (21%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           V GA G  G  LVK LL RG+ V A  R+P K         +  +   Q DL       +
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNPSKAP-------APGVTPVQKDLFDLADLAE 55

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
           A+ G D V     +   D                        +LL A  ++  V+R+V+ 
Sbjct: 56  ALAGVDAVVDAFGARPDD-------------------SDGVKHLLDAAARA-GVRRIVVV 95

Query: 136 SSVST 140
           S+   
Sbjct: 96  SAAGL 100

Length = 182

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 16/125 (12%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           V GA G +G  +V+ LL+RGY V A VRDP + +            +   DL    S   
Sbjct: 4   VVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAG----AEVVVGDLTDAESLAA 59

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
           A+ G D V   A S        + ++               +NL+ A  K+  VKR VL 
Sbjct: 60  ALEGIDAVISAAGSGGKGGPRTEAVDY-----------DGNINLIDAAKKAG-VKRFVLV 107

Query: 136 SSVST 140
           SS+  
Sbjct: 108 SSIGA 112

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 68.1 bits (167), Expect = 6e-13
 Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 17/129 (13%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVR-----DPGKLQIFSKWTRSDRLRLFQADLQVE 70
           VTGA+G+IGS LV+ L+ +GY V A V        G L       + D++ +   D++  
Sbjct: 3   VTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEVK-DKIEVVTGDIRDP 61

Query: 71  GSFDKAVMGCDGVFHVAA--SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
            S  KA+ GCD VFH+AA  ++ +     D   +YV +      +  TLN+L+A      
Sbjct: 62  DSVRKAMKGCDVVFHLAALIAIPYSYIAPD---SYVDTN-----VTGTLNVLQAARDLG- 112

Query: 129 VKRVVLTSS 137
           V++VV TS+
Sbjct: 113 VEKVVHTST 121

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 30/146 (20%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           + GA G  GS +V+  L RG+ V A VRDP KL         ++L++ Q D+       +
Sbjct: 4   IIGATGRTGSAIVREALARGHEVTALVRDPAKLPA-----EHEKLKVVQGDVLDLEDVKE 58

Query: 76  AVMGCDGVFHVAASMEFDINV----KDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR 131
           A+ G D V          I+      D   T + S         T N++ A +K+  VKR
Sbjct: 59  ALEGQDAV----------ISALGTRNDLSPTTLHSE-------GTRNIVSA-MKAAGVKR 100

Query: 132 VVLTSSVSTITAKDSSGEWRPVVDES 157
           +++   V    + D   +   V+D  
Sbjct: 101 LIV---VGGAGSLDDRPKVTLVLDTL 123

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 62.3 bits (152), Expect = 3e-11
 Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 16/110 (14%)

Query: 16  VTGANGYIGSWLVKTLLER-GYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFD 74
           V GA G  G  +V+ LL+  G+ V A  RDP      +K   +  + + Q DL    S +
Sbjct: 3   VFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPA--AKALAAPGVEVVQGDLDDPESLE 60

Query: 75  KAVMGCDGVFHVAASMEFD--------INVKD-----NIETYVQSTVINP 111
            A+ G  GVF V    E           NV D      ++ +V S+V + 
Sbjct: 61  AALKGVYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFVFSSVPDV 110

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 63.0 bits (153), Expect = 3e-11
 Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 19/131 (14%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           VTGA G++G  +V+ LL RG+ V A VR+P              +     DL+   S   
Sbjct: 5   VTGATGFVGGAVVRELLARGHEVRAAVRNPEAAA---ALAGGVEVV--LGDLRDPKSLVA 59

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
              G DGV  ++  ++     +    T V            +   +A      VK  V  
Sbjct: 60  GAKGVDGVLLISGLLDGSDAFRAVQVTAV------------VRAAEAA--GAGVKHGVSL 105

Query: 136 SSVSTITAKDS 146
           S +    A  S
Sbjct: 106 SVLGADAASPS 116

Length = 275

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 62.4 bits (152), Expect = 4e-11
 Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 15 CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFD 74
           VTGA GY+G  LV  LL+ G+ V A VR P KL        S+R+ + + DL+   S  
Sbjct: 2  LVTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLA---DRPWSERVTVVRGDLEDPESLR 58

Query: 75 KAVMGCDGVFHVAASM 90
           A+ G D  +++  SM
Sbjct: 59 AALEGIDTAYYLVHSM 74

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 61.5 bits (150), Expect = 9e-11
 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 23/121 (19%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           VTGA G +G+ +V+ LL +   V A VR+P K + F+    +D + + Q D     + ++
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFA----ADGVEVRQGDYDDPETLER 58

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
           A  G D +                    +  + +   IQ   N + A  K   VK +V  
Sbjct: 59  AFEGVDRLL------------------LISPSDLEDRIQQHKNFIDAA-KQAGVKHIVYL 99

Query: 136 S 136
           S
Sbjct: 100 S 100

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 19/125 (15%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQ-ADLQVEGSFD 74
           + GA G+IG  L + LLE+G+ V   VR+  +L                  DL+   S  
Sbjct: 3   ILGATGFIGRALARELLEQGHEVTLLVRNTKRL-----SKEDQEPVAVVEGDLRDLDSLS 57

Query: 75  KAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL 134
            AV G D V H+A +       +D  E           ++ T N+L+A  K   VK  + 
Sbjct: 58  DAVQGVDVVIHLAGAPRDT---RDFCEVD---------VEGTRNVLEAA-KEAGVKHFIF 104

Query: 135 TSSVS 139
            SS+ 
Sbjct: 105 ISSLG 109

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 60.1 bits (146), Expect = 3e-10
 Identities = 61/256 (23%), Positives = 95/256 (37%), Gaps = 41/256 (16%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           VTGANG+IG  LV  LL RG  V   VR+       +         L   D     SF  
Sbjct: 4   VTGANGFIGRALVDKLLSRGEEVRIAVRNAE-----NAEPSVVLAELPDID-----SFTD 53

Query: 76  AVMGCDGVFHVAA-SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL 134
             +G D V H+AA     +    D +  Y +        + T  L +A    + VKR V 
Sbjct: 54  LFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNT-----ELTRRLARAA-ARQGVKRFVF 107

Query: 135 TSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENK 194
            SSV     + + G   P  +     P             Y  SKL +E    +    + 
Sbjct: 108 LSSVKVN-GEGTVGA--PFDETDPPAPQDA----------YGRSKLEAERALLELGASDG 154

Query: 195 IDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI-LSSVSNRMGSIALVHIEDI 253
           +++V +    V GP     V  +   L+  I    +   +   +V NR    +LV ++++
Sbjct: 155 MEVVILRPPMVYGP----GVRGNFARLMRLI---DRGLPLPPGAVKNRR---SLVSLDNL 204

Query: 254 CNAHIFLMENDRAQGQ 269
            +A    +   +A   
Sbjct: 205 VDAIYLCISLPKAANG 220

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 60.1 bits (146), Expect = 3e-10
 Identities = 56/253 (22%), Positives = 98/253 (38%), Gaps = 50/253 (19%)

Query: 16  VTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSF 73
           VTG +G+ G  LVK LLERG  Y+    +  PG  +  S W   + +   + D+      
Sbjct: 4   VTGGSGFFGERLVKQLLERGGTYVRSFDIAPPG--EALSAWQHPN-IEFLKGDITDRNDV 60

Query: 74  DKAVMGCDGVFHVAASME--------FDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           ++A+ G D VFH AA +         +++NV                   T N+L AC +
Sbjct: 61  EQALSGADCVFHTAAIVPLAGPRDLYWEVNVG-----------------GTQNVLDACQR 103

Query: 126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEET 185
              V++ V TSS S I           + +     P   +        +Y  +K ++E  
Sbjct: 104 C-GVQKFVYTSSSSVIFGGQ------NIHNGDETLPYPPL-----DSDMYAETKAIAEII 151

Query: 186 AFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI 245
             +    + +   ++    + GP     VP   +       G  KF  +    +N    +
Sbjct: 152 VLEANGRDDLLTCALRPAGIFGPGDQGLVPILFEWAE---KGLVKF--VFGRGNNL---V 203

Query: 246 ALVHIEDICNAHI 258
              ++ ++ +AHI
Sbjct: 204 DFTYVHNLAHAHI 216

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 55/196 (28%), Positives = 81/196 (41%), Gaps = 44/196 (22%)

Query: 14  FCVTGANGYIGSWLVKTLLERGYIVHATVRD---PGKLQIFSKWTRSDRLRLFQADLQVE 70
             VTG  G+IGS LV  LLE G  V   V D    G+ +       +   R  + DL ++
Sbjct: 2   ILVTGGAGFIGSHLVDRLLEEGNEV--VVVDNLSSGRRENIEPEFENKAFRFVKRDL-LD 58

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
            +   A    D VFH+AA+ +  +   D      ++ +      +T N+L+A   +  VK
Sbjct: 59  TADKVAKKDGDTVFHLAANPDVRLGATDPDIDLEENVL------ATYNVLEAMRAN-GVK 111

Query: 131 RVVLTSSVSTITAKDSSGEWR--PVVDESCQTPIHHVWNKKASGWVYVLSKLLSE----- 183
           R+V  SS ST+      GE +  P  ++    PI           VY  SKL +E     
Sbjct: 112 RIVFASS-STVY-----GEAKVIPTPEDYPPLPIS----------VYGASKLAAEALISA 155

Query: 184 --------ETAFKFAN 191
                      F+FAN
Sbjct: 156 YAHLFGFQAWIFRFAN 171

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 59.8 bits (145), Expect = 5e-10
 Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 21/174 (12%)

Query: 16  VTGANGYIGSWLVKTLLERG-YIVHATVRD----PGKLQIFSKWTRSDRLRLFQADLQVE 70
           VTG  G++G  +++ LLER   +    V D    P  ++ F K      +   + D++  
Sbjct: 4   VTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKTYVTDIEGDIKDL 63

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
               +A  G   V H AA +  D+    N E   +  V       T  +L+AC+++ +VK
Sbjct: 64  SFLFRACQGVSVVIHTAAIV--DVFGPPNYEELEEVNV-----NGTQAVLEACVQN-NVK 115

Query: 131 RVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEE 184
           R+V TSS+  +   +  G  RP+ +    TP             Y  SKLL+E 
Sbjct: 116 RLVYTSSIE-VAGPNFKG--RPIFNGVEDTPYEDTSTPP-----YASSKLLAEN 161

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 59.1 bits (144), Expect = 7e-10
 Identities = 52/183 (28%), Positives = 78/183 (42%), Gaps = 50/183 (27%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWT-RSDRLRLFQADLQVEGSFD 74
           VTG  GYIGS  V+ LL+ G+ V   V D   L    K      + + ++ DL      D
Sbjct: 5   VTGGAGYIGSHTVRQLLKTGHEVV--VLD--NLSNGHKIALLKLQFKFYEGDLL-----D 55

Query: 75  KAVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPA------IQSTLNLLK 121
           +A++         D V H AAS              V  +V NP       +  TLNL++
Sbjct: 56  RALLTAVFEENKIDAVVHFAAS------------ISVGESVQNPLKYYDNNVVGTLNLIE 103

Query: 122 ACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLL 181
           A L++  VK+ + +S+ +      +S    P+ + S   PI+           Y  SKL+
Sbjct: 104 AMLQT-GVKKFIFSSTAAVYGEPTTS----PISETSPLAPIN----------PYGRSKLM 148

Query: 182 SEE 184
           SEE
Sbjct: 149 SEE 151

Length = 329

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 16/118 (13%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRS----DRLRLFQADLQVEG 71
           VTG  G++G  LVK LLE G+ V   VR     +   +   +    DR+R+ + DL    
Sbjct: 3   VTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQPN 62

Query: 72  ------SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC 123
                 +  +     D V H AAS +F    +D   T +  T      +  L L    
Sbjct: 63  LGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGT------EHVLELAARL 114

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 52/257 (20%), Positives = 85/257 (33%), Gaps = 40/257 (15%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           VTGA G+IGS +V+ L+  G+ V    R                 ++ + DL+      K
Sbjct: 5   VTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAKLEAA----GAQVHRGDLEDLDILRK 60

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
           A    D V H+A + +FD N     E      V   AI++    L+      + K ++ T
Sbjct: 61  AAAEADAVIHLAFTHDFD-NFAQACE------VDRRAIEALGEALRG-----TGKPLIYT 108

Query: 136 SSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKI 195
           S +  +      G+           P                 + +SE  A + A     
Sbjct: 109 SGIWLLGPT--GGQEEDEEAP--DDPPTPAA------------RAVSEAAALELAERGVR 152

Query: 196 DLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICN 255
             V  +   V G      VP  I +       +    + +    NR      VH +D   
Sbjct: 153 ASVVRLPPVVHGRGDHGFVPMLIAIAR-----EKGVSAYVGDGKNRW---PAVHRDDAAR 204

Query: 256 AHIFLMENDRAQGQYIC 272
            +   +E  +A   Y  
Sbjct: 205 LYRLALEKGKAGSVYHA 221

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 57/277 (20%), Positives = 103/277 (37%), Gaps = 39/277 (14%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           + G NG+IGS LV  LLE G  V    R     +          +   + D +     + 
Sbjct: 4   IVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYE-----LPLGGVDYIKGDYENRADLES 58

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
           A++G D V H+A++         N    +Q+ V       T+ LL+AC  +  + +++  
Sbjct: 59  ALVGIDTVIHLASTT-NPATSNKNPILDIQTNVA-----PTVQLLEACA-AAGIGKIIFA 111

Query: 136 SSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKI 195
           SS  T+       E  P+ +     PI            Y +SKL  E+    +     +
Sbjct: 112 SSGGTVY---GVPEQLPISESDPTLPIS----------SYGISKLAIEKYLRLYQYLYGL 158

Query: 196 DLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS-VSNRMGSIALV----HI 250
           D   +    ++ P+     P   Q ++ PI        IL        G    +    +I
Sbjct: 159 DYTVL---RISNPYGPGQRPDGKQGVI-PIA----LNKILRGEPIEIWGDGESIRDYIYI 210

Query: 251 EDICNAHIFLMENDRAQGQY-ICCVKSCPISEFIDHL 286
           +D+  A + L+ +   +  + I       ++E I  +
Sbjct: 211 DDLVEALMALLRSKGLEEVFNIGSGIGYSLAELIAEI 247

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 56.9 bits (138), Expect = 4e-09
 Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 9/129 (6%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP-GKLQIFSKWTRSDRLRLFQADLQVE 70
           K   VTG  G+ GSWL   L E G  V     DP     +F      +++   + D++  
Sbjct: 5   KRVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNKISSTRGDIRDL 64

Query: 71  GSFDKAVMGC--DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
            +  +A+     + VFH+AA     ++ KD +ET+   T     +  T+NLL+A  ++ S
Sbjct: 65  NALREAIREYEPEIVFHLAAQPLVRLSYKDPVETF--ET----NVMGTVNLLEAIRETGS 118

Query: 129 VKRVVLTSS 137
           VK VV  +S
Sbjct: 119 VKAVVNVTS 127

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 56.6 bits (137), Expect = 5e-09
 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 32/176 (18%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRD---PGKLQIFSKWTRSDRLRLFQADLQ---- 68
           VTG  GYIGS  V+ LLE G+ V   + D    G  +   +  R   +   + DL+    
Sbjct: 4   VTGGAGYIGSHTVRQLLESGHEV--VILDNLSNGSREALPRGERITPVTFVEGDLRDREL 61

Query: 69  VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
           ++  F++  +  D V H A  +    +V+  ++ Y  + V       TLNLL+A  ++  
Sbjct: 62  LDRLFEEHKI--DAVIHFAGLIAVGESVQKPLKYYRNNVV------GTLNLLEAMQQA-G 112

Query: 129 VKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEE 184
           VK+ + +SS +      S     P+ ++S   PI+           Y  SKL+SE+
Sbjct: 113 VKKFIFSSSAAVYGEPSSI----PISEDSPLGPIN----------PYGRSKLMSEQ 154

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 56.2 bits (136), Expect = 5e-09
 Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 27/175 (15%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVR------DPGKLQIFSKWTRSDRLRLFQADLQV 69
           VTG  G++G  +V+ LL  G +    VR       P  L+ FSK      +   + D+  
Sbjct: 2   VTGGGGFLGRHIVRLLLREGEL--QEVRVFDLRFSPELLEDFSK---LQVITYIEGDVTD 56

Query: 70  EGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESV 129
           +    +A+ G D V H AA +  D+  K   +T ++   +N  ++ T N+L AC+K+  V
Sbjct: 57  KQDLRRALQGSDVVIHTAAII--DVFGKAYRDTIMK---VN--VKGTQNVLDACVKA-GV 108

Query: 130 KRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEE 184
           + +V TSS+  +   +S G+  P+V+    TP             Y  SK L+E+
Sbjct: 109 RVLVYTSSMEVV-GPNSYGQ--PIVNGDETTPYESTHQD-----PYPESKALAEK 155

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 55.8 bits (135), Expect = 9e-09
 Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 55/261 (21%)

Query: 16  VTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLRLFQADL----QVE 70
           V G +G++G  LV+ LL RG   VH  V D          + S R++    DL     +E
Sbjct: 4   VVGGSGFLGRHLVEQLLRRGNPTVH--VFDIRPTF-ELDPSSSGRVQFHTGDLTDPQDLE 60

Query: 71  GSFDKAVMGCDGVFHVAA---SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE 127
            +F++   G + VFH A+       D+  K N             +Q T N+++AC K  
Sbjct: 61  KAFNEK--GPNVVFHTASPDHGSNDDLYYKVN-------------VQGTRNVIEACRKC- 104

Query: 128 SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAF 187
            VK++V TSS S +     +G+     DES   P  H          Y  +K L+E+   
Sbjct: 105 GVKKLVYTSSASVV----FNGQDIINGDESLPYPDKHQDA-------YNETKALAEKLVL 153

Query: 188 KFAN--ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI 245
           K AN  E+ +   ++    + GP     VP  ++   +   G +KF   +   +N     
Sbjct: 154 K-ANDPESGLLTCALRPAGIFGPGDRQLVPGLLKAAKN---GKTKF--QIGDGNN----- 202

Query: 246 ALV---HIEDICNAHIFLMEN 263
            L    ++E++ +AHI   + 
Sbjct: 203 -LFDFTYVENVAHAHILAADA 222

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 54.8 bits (133), Expect = 1e-08
 Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 42/144 (29%)

Query: 15  CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFS--------------KWTRSDRL 60
            VTG  G IGS L + +L+          +P K+ +FS              +     +L
Sbjct: 2   LVTGGGGSIGSELCRQILK---------FNPKKIILFSRDEFKLYEIRQELRQEYNDPKL 52

Query: 61  RLFQADLQVEGSFDKAV--MGCDGVFHVAA-----SMEFDINVKDNIETYVQSTVINPAI 113
           R F  D++     ++A+   G D VFH AA      +E+  N  + I+T       N  +
Sbjct: 53  RFFIGDVRDRERLERAMEQHGVDTVFHAAALKHVPLVEY--NPMEAIKT-------N--V 101

Query: 114 QSTLNLLKACLKSESVKRVVLTSS 137
             T N+ +A +++  V++ VL S+
Sbjct: 102 LGTENVAEAAIENG-VEKFVLIST 124

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 50/205 (24%), Positives = 73/205 (35%), Gaps = 27/205 (13%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPG-KLQIFSKWTRSDRLRLFQADLQV 69
           +   VTGA G+IGS L + L   G+ +  A  + P    Q     T  D   L   DL+ 
Sbjct: 1   QRALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQP----TDDDEFHL--VDLRE 54

Query: 70  EGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQS---TVINPAIQSTLNLLKACLKS 126
             +  KA  G D VFH+AA M            Y+QS    ++        N+L+A   +
Sbjct: 55  MENCLKATEGVDHVFHLAADM--------GGMGYIQSNHAVIMYNNTLINFNMLEAARIN 106

Query: 127 ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETA 186
             V+R +  SS                + E    P             Y   KL +E   
Sbjct: 107 -GVERFLFASSACVYPEFKQLETTVVRLREEDAWP-------AEPQDAYGWEKLATERLC 158

Query: 187 FKFANENKIDLVSVITTTVAGPFLT 211
             +  +  I+   V    + GP  T
Sbjct: 159 QHYNEDYGIETRIVRFHNIYGPRGT 183

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 54.8 bits (133), Expect = 2e-08
 Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 39/179 (21%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRD---PGKLQIFSKWTRSDRLRLFQADLQVEGS 72
           VTG  GYIGS  V  LLE GY V   V D    G  +         R+  ++ D++    
Sbjct: 4   VTGGAGYIGSHTVVELLEAGYDV--VVLDNLSNGHREAL-PRIEKIRIEFYEGDIR---- 56

Query: 73  FDKAVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
            D+A +         D V H AA      +V+  ++ Y  + V+      TLNLL+A   
Sbjct: 57  -DRAALDKVFAEHKIDAVIHFAALKAVGESVQKPLK-YYDNNVVG-----TLNLLEAMRA 109

Query: 126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEE 184
              VK  V +SS +     ++     P+ +E+   P +           Y  +KL+ E+
Sbjct: 110 H-GVKNFVFSSSAAVYGEPETV----PITEEAPLNPTN----------PYGRTKLMVEQ 153

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 48/251 (19%), Positives = 86/251 (34%), Gaps = 39/251 (15%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           +TGA+G++G  L + LL         + D   +      + + R+     DL V    + 
Sbjct: 5   ITGASGFVGQRLAERLLSDVPNERLILID---VVSPKAPSGAPRVTQIAGDLAVPALIEA 61

Query: 76  AVMG-CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL 134
              G  D VFH+AA +      + + +   +   +N  +  T NLL+A  K+    R V 
Sbjct: 62  LANGRPDVVFHLAAIV--SGGAEADFDLGYR---VN--VDGTRNLLEALRKNGPKPRFVF 114

Query: 135 TSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENK 194
           TSS++ +          PV D +   P             Y   K + E     ++    
Sbjct: 115 TSSLA-VYGLPLPN---PVTDHTALDPA----------SSYGAQKAMCELLLNDYSRRGF 160

Query: 195 IDLVSVITTTV-----AGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVH 249
           +D  ++   TV           S+  S+I  +  P+ G         +       +    
Sbjct: 161 VDGRTLRLPTVCVRPGRPNKAASAFASTI--IREPLVG-------EEAGLPVAEQLRYWL 211

Query: 250 IEDICNAHIFL 260
                    F+
Sbjct: 212 KSVATAVANFV 222

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 21/144 (14%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           K   +TG +  IG  L   L  +GY V AT R+P KL+       +D L + + D+  E 
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLE-SLGELLNDNLEVLELDVTDEE 59

Query: 72  SFDKAV-------MGCDGVFHVAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLL 120
           S   AV          D + + A    F    + ++++ +    +  V        L + 
Sbjct: 60  SIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEE-VRELFEVNVF-----GPLRVT 113

Query: 121 KACL---KSESVKRVVLTSSVSTI 141
           +A L   + +   R+V  SSV+ +
Sbjct: 114 RAFLPLMRKQGSGRIVNVSSVAGL 137

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 52.9 bits (127), Expect = 8e-08
 Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 19/132 (14%)

Query: 13  TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGS 72
           +  +TG  GY G  L   L + G  VH  + D  + Q        + ++  QAD++    
Sbjct: 1   SVLITGGGGYFGFRLGCALAKSG--VHVILFDIRRPQ----QELPEGIKFIQADVRDLSQ 54

Query: 73  FDKAVMGCDGVFHVAA---SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESV 129
            +KAV G D VFH+A+   S    +N ++ IE       IN  ++ T N+++ C++   V
Sbjct: 55  LEKAVAGVDCVFHIASYGMSGREQLN-RELIEE------IN--VRGTENIIQVCVRR-RV 104

Query: 130 KRVVLTSSVSTI 141
            R++ TS+ + I
Sbjct: 105 PRLIYTSTFNVI 116

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 50/151 (33%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           KT  VTG  G IGS L + +L+          +P ++ +FS+    D  +L+  D+++  
Sbjct: 251 KTVLVTGGGGSIGSELCRQILK---------FNPKEIILFSR----DEYKLYLIDMELRE 297

Query: 72  SF-------------DKAVM-------GCDGVFHVAA-----SMEFDINVKDNIETYVQS 106
            F             D+  +         D VFH AA      +E+      N E  +++
Sbjct: 298 KFPELKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEY------NPEEAIKT 351

Query: 107 TVINPAIQSTLNLLKACLKSESVKRVVLTSS 137
            V+      T N+ +A +K+  VK+ VL S+
Sbjct: 352 NVL-----GTENVAEAAIKNG-VKKFVLIST 376

Length = 588

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 57/313 (18%), Positives = 96/313 (30%), Gaps = 82/313 (26%)

Query: 21  GYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGC 80
           GY+G  L + LL +G+ V  T R P KL                  L  + +    +   
Sbjct: 7   GYLGQRLARQLLAQGWQVTGTTRSPEKLAADR--------PAGVTPLAADLTQPGLLADV 58

Query: 81  DGVF-HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS 139
           D +   +           D                    LL A  +  +V+RV+  SS  
Sbjct: 59  DHLVISLPPPAGSYRGGYDPG---------------LRALLDALAQLPAVQRVIYLSSTG 103

Query: 140 TITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVS 199
                D  GEW   VDE+  +P +    +     +     LL+                 
Sbjct: 104 VY--GDQQGEW---VDET--SPPNPS-TESGRALLEAEQALLA----------------- 138

Query: 200 VITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI-------ALVHIED 252
                        S P++I + L+ I G  +    L  ++   G           +H++D
Sbjct: 139 -----------LGSKPTTI-LRLAGIYGPGR--HPLRRLAQGTGRPPAGNAPTNRIHVDD 184

Query: 253 ICNAHIFLMENDRAQGQYICCVKSCPIS--EFI----DHLKLEYPSSKMQTFEGENQSSV 306
           +  A  F ++       Y       P++  EF     + L L  P      F        
Sbjct: 185 LVGALAFALQRPAPGPVYNVV-DDLPVTRGEFYQAAAELLGLPPP-----PFIPFAFLRE 238

Query: 307 PSVISSEKLKDLG 319
              +S+++LK   
Sbjct: 239 GKRVSNDRLKAEL 251

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 3e-07
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 13/98 (13%)

Query: 13  TFCVTGANGYIGSWLVKTLLE--RGYIVHATVRDPGKLQIFSKWTR---SDRLR-----L 62
            + VTG  G+IG  LV  LL+  R   VH  VR    L           +DR+      L
Sbjct: 2   RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVR-RQSLSRLEALAAYWGADRVVPLVGDL 60

Query: 63  FQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNI 100
            +  L +  +    +   D V H+AA   +D+   +  
Sbjct: 61  TEPGLGLSEADIAELGDIDHVVHLAAI--YDLTADEEA 96

Length = 657

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 50.8 bits (122), Expect = 3e-07
 Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 22/127 (17%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATV----RDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           VTGA G +G  L + L      V        R P       ++ R D      AD+  E 
Sbjct: 3   VTGAAGGLGRLLARRLAASPR-VIGVDGLDRRRPPGSPPKVEYVRLDIRDPAAADVFRER 61

Query: 72  SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR 131
                    D V H+A  ++     +D  E +     IN  +  T N+L AC  +  V R
Sbjct: 62  -------EADAVVHLAFILDPP---RDGAERH----RIN--VDGTQNVLDACAAA-GVPR 104

Query: 132 VVLTSSV 138
           VV+TSSV
Sbjct: 105 VVVTSSV 111

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 50.7 bits (122), Expect = 4e-07
 Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 26/139 (18%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL----QIFSKWTRSDRLRLFQAD 66
           KT  VTG  G IGS LV+ +L+ G   +    RD  KL    +        D+LR    D
Sbjct: 3   KTILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFIIGD 62

Query: 67  LQVEGSFDKAVM---GCDGVFHVAA-----SMEFDINVKDNIETYVQSTVINPAIQSTLN 118
           ++ +    +      G D VFH AA     SME      DN E  +++ V+      T N
Sbjct: 63  VRDK-ERLRRAFKERGPDIVFHAAALKHVPSME------DNPEEAIKTNVLG-----TKN 110

Query: 119 LLKACLKSESVKRVVLTSS 137
           ++ A +++  V++ V  S+
Sbjct: 111 VIDAAIENG-VEKFVCIST 128

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 13/139 (9%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTR-SDRLRLFQADL----QVE 70
           VTGA+  IG  + + L   G  V    R+   L   +            QAD+     VE
Sbjct: 3   VTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEEDVE 62

Query: 71  GSFDKAVM---GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS- 126
              ++A+      D + + A         +   E +    V++  +     L +A L   
Sbjct: 63  ALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDW--DRVLDVNLTGVFLLTRAALPHM 120

Query: 127 -ESVK-RVVLTSSVSTITA 143
            +    R+V  SSV+ +  
Sbjct: 121 KKQGGGRIVNISSVAGLRP 139

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 50.5 bits (121), Expect = 5e-07
 Identities = 40/191 (20%), Positives = 71/191 (37%), Gaps = 34/191 (17%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYI-VHATVR------------DPGKLQIFSKWTRSD 58
           +   +TGA G++G++L+  LL+R    V   VR                L        +D
Sbjct: 1   RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSAD 60

Query: 59  RLRLFQADLQVEG------SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPA 112
           R+ +   DL          ++ +     D + H AA       + +++  Y  S +    
Sbjct: 61  RVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAA-------LVNHVFPY--SELRGAN 111

Query: 113 IQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASG 172
           +  T  +L+     +  K +   SS+S    +  S      VD    +P  +V    A G
Sbjct: 112 VLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNF---TVDFDEISPTRNVGQGLAGG 167

Query: 173 WVYVLSKLLSE 183
             Y  SK ++E
Sbjct: 168 --YGRSKWVAE 176

Length = 382

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 50.3 bits (121), Expect = 5e-07
 Identities = 70/346 (20%), Positives = 124/346 (35%), Gaps = 73/346 (21%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVR---DPGKLQIFSKWTRSDRLRLFQADLQVEGS 72
           +TG  G  GS+L + LLE+GY VH  VR        +I   +   DR+ L   DL    S
Sbjct: 4   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYINKDRITLHYGDLTDSSS 63

Query: 73  FDKAVMGC--DGVFHVAA----SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS 126
             +A+     D ++H+AA     + FD    D   T  +   +      TLNLL+A ++ 
Sbjct: 64  LRRAIEKVRPDEIYHLAAQSHVKVSFD----DPEYTA-EVNAV-----GTLNLLEA-IRI 112

Query: 127 ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ---TPIHHVWNKKASGWVYVLSKLLSE 183
             +      +S S    K         V E  Q   TP         S   Y +SKL ++
Sbjct: 113 LGLDARFYQASSSEEYGK---------VQELPQSETTPFR-----PRS--PYAVSKLYAD 156

Query: 184 ETAFKFANENKIDLVSVITTTVAGP-----FLTSSVPSSI----QVLLSPITGDSKFFSI 234
                +     +  V+       GP     F+T  +   +      L   +         
Sbjct: 157 WITRNYREAYGLFAVNGRLFNHEGPRRGETFVTRKITRQVARIKAGLQPVL--------- 207

Query: 235 LSSVSNRMGSIALV----HIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEY 290
                 ++G++          D   A+  L++        I   ++  + EF++    E 
Sbjct: 208 ------KLGNLDAKRDWGDARDYVEAYWLLLQQGEPDDYVIATGETHSVREFVELAFEES 261

Query: 291 PSSKMQTFEGE----NQSSVPSVI-SSEKLKD-LGFNYKHGIEDII 330
             +     E +      + V  ++    K ++ LG+  +   E+++
Sbjct: 262 GLTGDIEVEIDPRYFRPTEVDLLLGDPSKAREELGWKPEVSFEELV 307

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 49.6 bits (119), Expect = 7e-07
 Identities = 40/130 (30%), Positives = 50/130 (38%), Gaps = 30/130 (23%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLR-----LFQADLQVE 70
           VTGA G IGS +  TLLE G  V A VR            R+  L      +   DL   
Sbjct: 3   VTGATGRIGSKVATTLLEAGRPVRALVRSD---------ERAAALAARGAEVVVGDLDDP 53

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQ-STVINPAIQSTLNLLKACLKSESV 129
                A+ G D VF   A      + +     YVQ +     A++      +A      V
Sbjct: 54  AVLAAALAGVDAVF-FLAPPAPTADARP---GYVQAAEAFASALR------EAG-----V 98

Query: 130 KRVVLTSSVS 139
           KRVV  SSV 
Sbjct: 99  KRVVNLSSVG 108

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 17/137 (12%)

Query: 16  VTGANGYIGSWLVKTLLERGY--IVHATVRDPGKLQ-IFSKWTRSDRLRLFQADL----- 67
           +TGA+  IG  L + LL+RG   +V    R    LQ +  +     R+   +ADL     
Sbjct: 4   LTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLRVTTVKADLSDAAG 63

Query: 68  --QVEGSFDKAVMGCDGVFHVAASME-----FDINVKDNIETYVQSTVINPAIQSTLNLL 120
             Q+  +  K     D + + A S+        I++ D ++ Y    + +P +  T  LL
Sbjct: 64  VEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDL-DELQKYFDLNLTSP-VCLTSTLL 121

Query: 121 KACLKSESVKRVVLTSS 137
           +A  K    K VV  SS
Sbjct: 122 RAFKKRGLKKTVVNVSS 138

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 20/69 (28%), Positives = 31/69 (44%)

Query: 15 CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFD 74
           V GA G+IG ++V  L +RG  V    R     +         ++   + DL+ + S  
Sbjct: 4  TVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQVLFVEFDLRDDESIR 63

Query: 75 KAVMGCDGV 83
          KA+ G D V
Sbjct: 64 KALEGSDVV 72

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 37/192 (19%), Positives = 60/192 (31%), Gaps = 42/192 (21%)

Query: 16  VTGANGYIGSWLVKTLLER--GYIVHATVRDPG-------------KLQIFSKWTRSDRL 60
           +TGA G++G  L++ LL       ++  VR                K  +F +    +R+
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 61  RLFQADLQVEG------SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQ 114
                DL           F +     D + H AA++ F        E Y  S +    + 
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFV-------EPY--SDLRATNVL 111

Query: 115 STLNLLKACLKSESVKRVVLTSS-VSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGW 173
            T  +L+   K          S+            E    +DE     +         G 
Sbjct: 112 GTREVLRLA-KQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLG--------GL 162

Query: 174 --VYVLSKLLSE 183
              Y  SK L+E
Sbjct: 163 PNGYTQSKWLAE 174

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 22/126 (17%)

Query: 13  TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGS 72
           T  V GA+G IG  + + L  RG+ V    R   KL           + +  AD     S
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLA------WLPGVEIVAADAMDASS 54

Query: 73  FDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRV 132
              A  G D ++H A           N        +  P +++    + A     +  ++
Sbjct: 55  VIAAARGADVIYHCA-----------NPAYTRWEELFPPLMENV---VAAA--EANGAKL 98

Query: 133 VLTSSV 138
           VL  +V
Sbjct: 99  VLPGNV 104

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 21/93 (22%)

Query: 16 VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQA--------DL 67
          V GA GY G  +V+  L+ G+ V A VRDP          +S+  +  +A        DL
Sbjct: 3  VFGATGYQGGSVVRASLKAGHPVRALVRDP----------KSELAKSLKAAGVELVEGDL 52

Query: 68 QVEGSFDKAVMGCDGVFHV---AASMEFDINVK 97
              S  +A+ G D VF V     S E +   K
Sbjct: 53 DDHESLVEALKGVDVVFSVTGFWLSKEIEDGKK 85

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 47.5 bits (113), Expect = 4e-06
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 20/128 (15%)

Query: 15  CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFD 74
           C+TGA G+I S + + L   G+  +    D  K +  S+        L   DL+V  +  
Sbjct: 25  CITGAGGFIASHIARRLKAEGH--YIIASDWKKNEHMSEDMFCHEFHL--VDLRVMENCL 80

Query: 75  KAVMGCDGVFHVAASMEFDINVKDNIETYVQS--TVI---NPAIQSTLNLLKACLKSESV 129
           K   G D VF++AA M            ++QS  +VI   N  I  + N+L+A  +   V
Sbjct: 81  KVTKGVDHVFNLAADM--------GGMGFIQSNHSVIMYNNTMI--SFNMLEAA-RINGV 129

Query: 130 KRVVLTSS 137
           KR    SS
Sbjct: 130 KRFFYASS 137

Length = 370

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 45/154 (29%), Positives = 57/154 (37%), Gaps = 51/154 (33%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIV---------------HATVRDPGKLQIFSKWT- 55
               VTGA G+IG  + K LLERG  V                A +   GK   F     
Sbjct: 1   MKILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFKFVKG 60

Query: 56  ----RSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA------SMEFDINVKDNIETYVQ 105
               R    RLF+     +  FD        V H+AA      S+E       N   YV 
Sbjct: 61  DLEDREALRRLFK-----DHEFDA-------VIHLAAQAGVRYSLE-------NPHAYVD 101

Query: 106 STVINPAIQSTLNLLKACLKSESVKRVVLTSSVS 139
           S ++       LNLL+ C +   VK +V  SS S
Sbjct: 102 SNIV-----GFLNLLELC-RHFGVKHLVYASSSS 129

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 46.0 bits (110), Expect = 9e-06
 Identities = 27/105 (25%), Positives = 36/105 (34%), Gaps = 25/105 (23%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYI-VHATVRDPGKLQIFSKWTRSDRLRLFQADLQVE 70
           K   VTGAN  IG   V+ LL RG   V+A  RDP  +          R+   Q D+   
Sbjct: 7   KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDL-----GPRVVPLQLDVTDP 61

Query: 71  GSFDKAVMGCD---------GVFHVAASM----------EFDINV 96
            S   A              G+F   + +          E + N 
Sbjct: 62  ASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNY 106

Length = 238

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 38/143 (26%), Positives = 56/143 (39%), Gaps = 32/143 (22%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP----GKLQIFSKWTRSDRLRLFQADL 67
               VTG  G+IGS  V+ LL +         D     G L+     + S R R  + D+
Sbjct: 1   MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVSSSPRYRFVKGDI 60

Query: 68  ----QVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPA------IQSTL 117
                V+  F++     D V H AA            E++V  ++ +P       +  T 
Sbjct: 61  CDAELVDRLFEEE--KIDAVIHFAA------------ESHVDRSISDPEPFIRTNVLGTY 106

Query: 118 NLLKACLKSESVKRVVLTSSVST 140
            LL+A  K   VKR V    +ST
Sbjct: 107 TLLEAARKY-GVKRFV---HIST 125

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 22/150 (14%)

Query: 16  VTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSD-RLRLFQADL------ 67
           +TGA+  IG  LV+ LL RG   V AT RDP      +    S  RL + + D+      
Sbjct: 3   ITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEIAE 62

Query: 68  ---QVEGSFDKA----VMGCDGVFHVAASMEFDINVKDNIETYVQSTVINP--AIQSTLN 118
               V      A    ++   G+ H       +++ +D +E + Q  V+ P    Q+ L 
Sbjct: 63  SAEAVAERLGDAGLDVLINNAGILHSYGPAS-EVDSEDLLEVF-QVNVLGPLLLTQAFLP 120

Query: 119 LLKACLKSESVKRVVLTSSVSTITAKDSSG 148
           LL    K    K + ++S V +I    S G
Sbjct: 121 LLL---KGARAKIINISSRVGSIGDNTSGG 147

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 18/129 (13%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRD---PGKLQIFSKWTRSDRLRLFQADLQ 68
           K   +TG  G++GS L   LLE G+ V     D    G+ +              + D  
Sbjct: 1   KRILITGGAGFLGSHLCDRLLEDGHEV--ICVDNFFTGRKRNIEHLIGHPNFEFIRHD-- 56

Query: 69  VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
           V       V   D ++H+A          + I+T      +   +  TLN+L    +  +
Sbjct: 57  VTEPLYLEV---DQIYHLACPASPVHYQYNPIKT------LKTNVLGTLNMLGLAKRVGA 107

Query: 129 VKRVVLTSS 137
             RV+L S+
Sbjct: 108 --RVLLAST 114

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 44.5 bits (105), Expect = 4e-05
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 11/137 (8%)

Query: 2   EKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLR 61
            + +    ++KT  V GA G  G  +V+ LL +G+ V A VRD  K +  +   +   L+
Sbjct: 8   SEEDAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAK--TSLPQDPSLQ 65

Query: 62  LFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLK 121
           + +AD+  EGS        D    V  +  F    + + + +    V N     T+NL++
Sbjct: 66  IVRADV-TEGSDKLVEAIGDDSDAVICATGF----RRSFDPFAPWKVDN---FGTVNLVE 117

Query: 122 ACLKSESVKRVVLTSSV 138
           AC K   V R +L SS+
Sbjct: 118 ACRK-AGVTRFILVSSI 133

Length = 251

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 67/335 (20%), Positives = 115/335 (34%), Gaps = 79/335 (23%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           +TG  G+IG  L + L +RG+ V    R P                     L+       
Sbjct: 3   ITGGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTKWEGYKPWAGEDADSLE------- 55

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETY-VQSTVINPAIQSTLNLLKACLKSESVKRVVL 134
              G D V ++A        + D   T   +  + +  I +T  L++A   +E   +V +
Sbjct: 56  ---GADAVINLAGE-----PIADKRWTEERKQEIRDSRIDTTRLLVEAIAAAEQKPKVFI 107

Query: 135 TSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSE-ETAFKFANEN 193
             S S +     S + R   +E          +     +   L++L  + E A + A + 
Sbjct: 108 --SASAVGYYGPSED-REYTEED---------SPAGDDF---LAELCRDWEEAAQAAEDL 152

Query: 194 KIDLVSVITTTVAGP---FLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS----IA 246
              +V + T  V GP    L          +L P     +       +   +GS     +
Sbjct: 153 GTRVVLLRTGIVLGPKGGAL--------AKMLLPF----RLG-----LGGPLGSGRQWFS 195

Query: 247 LVHIEDICNAHIFLMENDRAQGQYICCVKSCPIS--EFIDHL--------KLEYPSSKMQ 296
            +HIED+    +F +EN    G         P+   EF   L            P+  ++
Sbjct: 196 WIHIEDLVQLILFALENASVSGPVNATAPE-PVRNKEFAKALARALHRPAFFPVPAFVLR 254

Query: 297 TFEGE-------NQSSVPSVISSEKLKDLGFNYKH 324
              GE        Q  +P     EKL + GF +++
Sbjct: 255 ALLGEMAALLLKGQRVLP-----EKLLEAGFQFQY 284

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 44.2 bits (105), Expect = 5e-05
 Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 13/128 (10%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHA--TVRDPGKLQIFSKWTRSDR----LRLFQADLQV 69
           +TG  G+IGS L +  L++G+ V     +   G       W +++R    +R    D++ 
Sbjct: 5   ITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRG-SFGNLAWLKANREDGGVRFVHGDIRN 63

Query: 70  EGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESV 129
               +      D + H AA      +           T        TLN+L+A  +    
Sbjct: 64  RNDLEDLFEDIDLIIHTAAQPSVTTSASS--PRLDFETNAL----GTLNVLEAARQHAPN 117

Query: 130 KRVVLTSS 137
              + TS+
Sbjct: 118 APFIFTST 125

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 43.3 bits (102), Expect = 8e-05
 Identities = 32/137 (23%), Positives = 47/137 (34%), Gaps = 14/137 (10%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPG-----KLQIFSKWTRSDRLRLFQADL--- 67
           VTGA+  IG  + + L   G  V    R         L    K     R     AD+   
Sbjct: 10  VTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDD 69

Query: 68  --QVEGSFDKAVM---GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA 122
              VE     A       D + + A     D  +++  E      VI+  +     L +A
Sbjct: 70  EESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWD-RVIDVNLLGAFLLTRA 128

Query: 123 CLKSESVKRVVLTSSVS 139
            L     +R+V  SSV+
Sbjct: 129 ALPLMKKQRIVNISSVA 145

Length = 251

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 11/130 (8%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYIVHATV---RDPGKLQIFSKWTRSDRLRLFQADL 67
           +K+  +TG  G  G   +  LLE  Y     +   RD  K     +   +  LR F  D+
Sbjct: 4   NKSILITGGTGSFGKAFISRLLEN-YNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDV 62

Query: 68  QVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE 127
           + +    +A+ G D V H AA  +      +  E       I   I    N++ A + + 
Sbjct: 63  RDKERLTRALRGVDYVVHAAALKQVPAAEYNPFE------CIRTNINGAQNVIDAAIDN- 115

Query: 128 SVKRVVLTSS 137
            VKRVV  S+
Sbjct: 116 GVKRVVALST 125

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADL 67
          SKT+ +TGA+   G  + + LL RG  V ATVR P  L    K    DRL + Q D+
Sbjct: 2  SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDL-KARYGDRLWVLQLDV 57

Length = 276

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGS 72
           V GA GYIG ++V+ L+ RGY V A  R+  K  I  K  + D  +       V G 
Sbjct: 65  VVGATGYIGKFVVRELVRRGYNVVAVARE--KSGIRGKNGKEDTKKELPGAEVVFGD 119

Length = 390

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 40/144 (27%), Positives = 53/144 (36%), Gaps = 22/144 (15%)

Query: 13  TFCVTGANGYIGSWLVKTLLERGYI-VHATVRDPGKLQIFSKWTRSDRLR-------LFQ 64
            + VTG  G IG  L + L  R    +    R P   +   K      L           
Sbjct: 207 VYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYIS 266

Query: 65  ADL----QVEGSFDKAVMGC---DGVFHVAASMEFD--INVKDNIETYVQSTVINPAIQS 115
           AD+     V    +K        DGV H AA +  D  +  K   E +    V+ P +  
Sbjct: 267 ADVTDAAAVRRLLEKVRERYGAIDGVIH-AAGVLRDALLAQKTA-EDFEA--VLAPKVDG 322

Query: 116 TLNLLKACLKSESVKRVVLTSSVS 139
            LNL +A L  E +   VL SSVS
Sbjct: 323 LLNLAQA-LADEPLDFFVLFSSVS 345

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 21/132 (15%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ-IFSKWTRSDRLRLFQADLQV 69
            K   +TGA+G IG  L + L   G  +    R+  KL+ + ++     R R   ADL  
Sbjct: 5   DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADL-- 62

Query: 70  EGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESV 129
             S      G + V   A  M   INV           +IN A  +   LL+     E++
Sbjct: 63  -TSEA----GREAVLARAREMG-GINV-----------LINNAGVNHFALLED-QDPEAI 104

Query: 130 KRVVLTSSVSTI 141
           +R++  +  + +
Sbjct: 105 ERLLALNLTAPM 116

Length = 263

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 56/264 (21%), Positives = 96/264 (36%), Gaps = 57/264 (21%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGK---LQIFSKWTRSDRLRLFQADLQVEGS 72
           +TG  G+IG  L + L   G+ V    R PGK   L     W                  
Sbjct: 4   ITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGLAEVITW-------------DGLSL 50

Query: 73  FDKAVMGCDGVFHVAASMEFDINVKDNIET-YVQSTVINPAIQSTLNLLKACLKSESVKR 131
               + G D V ++A        +     T   +  +++  I+ST  L++A   + +  +
Sbjct: 51  GPWELPGADAVINLAGE-----PIACRRWTEANKKEILSSRIESTRVLVEAIANAPAPPK 105

Query: 132 VVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSE-ETAFKFA 190
           V++  S S +     SG+   V+ E+             SG  + L+++    E A + A
Sbjct: 106 VLI--SASAVGYYGHSGD--EVLTEN-----------SPSGKDF-LAEVCKAWEKAAQPA 149

Query: 191 NENKIDLVSVITTTVAGP---FLTSSVPSSIQVLLSPITGDSK-FFSILSSVSNRMGSIA 246
           +E    +V + T  V GP    L   +      L  P+ G  + + S             
Sbjct: 150 SELGTRVVILRTGVVLGPDGGALPKMLLPFRLGLGGPL-GSGRQWMS------------- 195

Query: 247 LVHIEDICNAHIFLMENDRAQGQY 270
            +HI+D+     F +EN    G  
Sbjct: 196 WIHIDDLVRLIEFAIENPDLSGPV 219

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 16 VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
          + GA+G  GS ++K  L+RG+ V A VR+  KL           + + Q D+    S   
Sbjct: 5  IIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR------QGVTILQKDIFDLTSLAS 58

Query: 76 AVMGCDGVF 84
           + G D V 
Sbjct: 59 DLAGHDAVI 67

Length = 211

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 47/273 (17%)

Query: 13  TFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVE 70
              VTG  G+IGS LVK L ERG   I+   V D   L    K+     L++  AD   +
Sbjct: 1   MIIVTGGAGFIGSNLVKALNERGITDIL---VVD--NLSNGEKFKNLVGLKI--ADYIDK 53

Query: 71  GSFDKAVMGCDG------VFHVAA---SMEFDINVKDNIETYVQSTVINPAIQSTLNLLK 121
             F   V   D       +FH  A   + E D              +++   Q T  LL 
Sbjct: 54  DDFKDWVRKGDENFKIEAIFHQGACSDTTETD-----------GKYMMDNNYQYTKELLH 102

Query: 122 ACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLL 181
            CL+ +   R +  SS +     + S  +   ++     P++          VY  SKLL
Sbjct: 103 YCLEKKI--RFIYASSAAVY--GNGSLGFAEDIETPNLRPLN----------VYGYSKLL 148

Query: 182 SEETAFKFANENKIDLVSVITTTVAGP--FLTSSVPSSIQVLLSPI--TGDSKFFSILSS 237
            ++ A +   E    +V +    V GP  +    + S +  L + I      K F     
Sbjct: 149 FDQWARRHGKEVLSQVVGLRYFNVYGPREYHKGRMASVVFHLFNQIKAGEKVKLFKSSDG 208

Query: 238 VSNRMGSIALVHIEDICNAHIFLMENDRAQGQY 270
            ++       V+++D+   ++F +EN    G +
Sbjct: 209 YADGEQLRDFVYVKDVVKVNLFFLENPSVSGIF 241

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 40.6 bits (96), Expect = 6e-04
 Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 29/126 (23%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWT--RSDRLRLFQADLQVEGSF 73
           VTG  G +GS +V+ L  RGY                      S  L L   +  V   F
Sbjct: 4   VTGHRGLVGSAIVRVLARRGY---------------ENVVFRTSKELDLTDQE-AVRAFF 47

Query: 74  DKAVMGCDGVFHVAASMEFDI--NVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR 131
           +K     D V H+AA     I  N+    +    + +IN       N++ A  +    K 
Sbjct: 48  EKE--KPDYVIHLAA-KVGGIVANMTYPADFLRDNLLIN------DNVIHAAHRFGVKKL 98

Query: 132 VVLTSS 137
           V L SS
Sbjct: 99  VFLGSS 104

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 35/190 (18%), Positives = 74/190 (38%), Gaps = 39/190 (20%)

Query: 16  VTGANGYIGSWLVKTLLERGYI--VHATVRDPG------KLQIFSKWTRSDRLRLFQAD- 66
           +TGA G++G++L++ LL+R  +  ++  VR         +L    K    +     +   
Sbjct: 4   LTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELELSR 63

Query: 67  LQV-------------EGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAI 113
           ++V             +  + +     D + H  A    ++N     E    + V+    
Sbjct: 64  IKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGA----NVNWVYPYEELKPANVL---- 115

Query: 114 QSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGW 173
             T  LLK    +  +K +   S++S  +A++ +       D+     +    N   +G 
Sbjct: 116 -GTKELLKLAA-TGKLKPLHFVSTLSVFSAEEYNAL-----DDEESDDMLESQNGLPNG- 167

Query: 174 VYVLSKLLSE 183
            Y+ SK ++E
Sbjct: 168 -YIQSKWVAE 176

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 40.7 bits (96), Expect = 8e-04
 Identities = 36/141 (25%), Positives = 51/141 (36%), Gaps = 27/141 (19%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRD----PGKLQIFSKWTRSDRLRLFQADL 67
               VTG  G+IGS  V+ +L +    H    D     G L+  +    S R R  Q D+
Sbjct: 1   MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDI 60

Query: 68  QVEGSFDKAVMGC--DGVFHVAASMEFDINVKDNIETYVQSTVINPA------IQSTLNL 119
                 D+       D V H AA            E++V  ++  PA      +  T  L
Sbjct: 61  CDRELVDRLFKEYQPDAVVHFAA------------ESHVDRSIDGPAPFIQTNVVGTYTL 108

Query: 120 LKACLKSESVKRVVLTSSVST 140
           L+A  K     R      +ST
Sbjct: 109 LEAARKYWGKFRFH---HIST 126

Length = 340

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 40.1 bits (94), Expect = 9e-04
 Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 10 RSKTFCVTGANGYIGSWLVKTLLERGYI-VHATVRDPG 46
          + KT  VTGAN  IG   V++LL  G   V+A VRDPG
Sbjct: 2  KDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPG 39

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 14/120 (11%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYIVHATVR-----DPGKLQIFSKWTRSD-RLRLFQ 64
            K   +TG  G  GS+L + LLE+GY VH   R     +  ++ ++     +D RL L  
Sbjct: 2   GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHY 61

Query: 65  ADLQVEGSFDKAV--MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA 122
            DL    +  + +  +  D ++++AA      +V  + E    +  ++ AI  TL LL+A
Sbjct: 62  GDLTDSSNLLRILEEVQPDEIYNLAAQS----HVGVSFEQPEYTADVD-AI-GTLRLLEA 115

Length = 345

>gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 32/138 (23%), Positives = 46/138 (33%), Gaps = 36/138 (26%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           VTG  G+IGS LVK L ERG            + +        +     ADL +    DK
Sbjct: 3   VTGGAGFIGSNLVKALNERGI---------TDILVVDNLRDGHKFLNL-ADLVIADYIDK 52

Query: 76  ----------AVMGCDGVFHVAA---SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA 122
                     A    + +FH  A   + E D              ++    Q +  LL  
Sbjct: 53  EDFLDRLEKGAFGKIEAIFHQGACSDTTETD-----------GEYMMENNYQYSKRLLDW 101

Query: 123 CLKSESVKRVVLTSSVST 140
           C +       +  SS +T
Sbjct: 102 CAEKG--IPFIYASSAAT 117

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 9/131 (6%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP-GKLQIFSKWTRSDRLRLFQADLQ 68
           + K   VTG  G+ GSWL   LLE G  V+    DP     +F     + ++     D++
Sbjct: 3   QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIR 62

Query: 69  VEGSFDKAVMGC--DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS 126
                 KA+     + VFH+AA      +  D +ET+ ++ V+      T+NLL+A    
Sbjct: 63  DAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETF-ETNVM-----GTVNLLEAIRAI 116

Query: 127 ESVKRVVLTSS 137
            SVK VV  +S
Sbjct: 117 GSVKAVVNVTS 127

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 32/143 (22%), Positives = 48/143 (33%), Gaps = 24/143 (16%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLR--LFQADLQV 69
           K   VTGA+  IG  + + L   GY V   +R+P  L        +          D + 
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDL----AALSASGGDVEAVPYDARD 56

Query: 70  ---EGSFDKAVM----GCDGVFHVAASME---FDINVKDNIETYVQSTVINPAIQSTLNL 119
                +   A+       D + H A               +E +    VI PA      L
Sbjct: 57  PEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAE-----L 111

Query: 120 LKACLKSESVK---RVVLTSSVS 139
            +A L +       RVV  +S+S
Sbjct: 112 TRALLPALREAGSGRVVFLNSLS 134

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 48/271 (17%), Positives = 75/271 (27%), Gaps = 71/271 (26%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRL----RLFQADL 67
               + G   +IG  LV+ LL  G+ V           +F++      L         D 
Sbjct: 1   MKILIIGGTRFIGKALVEELLAAGHDVT----------VFNRGRTKPDLPEGVEHIVGDR 50

Query: 68  QVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE 127
                        D +  +    +FD+ V D I  Y    V           L A     
Sbjct: 51  NDR----------DALEELLGGEDFDV-VVDTI-AYTPRQV--------ERALDAF--KG 88

Query: 128 SVKRVVLTSSVSTITAKDS-SGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETA 186
            VK+ +  SS S          E  P+ +                 W Y   K  +E+  
Sbjct: 89  RVKQYIFISSASVYLKPGRVITESTPLREPD--AVGLSDP------WDYGRGKRAAEDVL 140

Query: 187 FKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF--------SILSSV 238
            + A         V    + GP                 TG   +F         IL   
Sbjct: 141 IEAAA---FPYTIVRPPYIYGPGD--------------YTGRLAYFFDRLARGRPILVPG 183

Query: 239 SNRMGSIALVHIEDICNAHIFLMENDRAQGQ 269
                 +  +H++D+  A +    N +A G 
Sbjct: 184 DGHS-LVQFIHVKDLARALLGAAGNPKAIGG 213

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	348
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
PLN02583	297	cinnamoyl-CoA reductase	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	100.0
PRK05865	854	hypothetical protein; Provisional	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PLN02778	298	3,5-epimerase/4-reductase	100.0
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	100.0
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.97
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.97
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.96
PLN02503	605	fatty acyl-CoA reductase 2	99.95
PRK12320	699	hypothetical protein; Provisional	99.95
PLN02260	668	probable rhamnose biosynthetic enzyme	99.95
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.94
PRK06482	276	short chain dehydrogenase; Provisional	99.94
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.94
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.93
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.92
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.92
PRK08263	275	short chain dehydrogenase; Provisional	99.92
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.92
PRK06180	277	short chain dehydrogenase; Provisional	99.92
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.92
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.91
PRK07775	274	short chain dehydrogenase; Provisional	99.91
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.91
PRK09135	249	pteridine reductase; Provisional	99.91
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.91
KOG2774	366	consensus NAD dependent epimerase [General functio	99.91
PRK05876	275	short chain dehydrogenase; Provisional	99.9
PRK07074	257	short chain dehydrogenase; Provisional	99.9
PRK06194	287	hypothetical protein; Provisional	99.9
PRK06914	280	short chain dehydrogenase; Provisional	99.9
PRK06138	252	short chain dehydrogenase; Provisional	99.9
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.9
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.9
PRK06182	273	short chain dehydrogenase; Validated	99.9
PRK07067	257	sorbitol dehydrogenase; Provisional	99.9
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.89
PRK07060	245	short chain dehydrogenase; Provisional	99.89
PRK12746	254	short chain dehydrogenase; Provisional	99.89
PRK07806	248	short chain dehydrogenase; Provisional	99.89
PLN03209	576	translocon at the inner envelope of chloroplast su	99.89
PRK05875	276	short chain dehydrogenase; Provisional	99.89
PRK08219	227	short chain dehydrogenase; Provisional	99.89
PRK12829	264	short chain dehydrogenase; Provisional	99.89
PRK06179	270	short chain dehydrogenase; Provisional	99.89
PRK07774	250	short chain dehydrogenase; Provisional	99.89
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.88
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.88
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.88
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK12828	239	short chain dehydrogenase; Provisional	99.88
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.87
PRK07890	258	short chain dehydrogenase; Provisional	99.87
PRK08628	258	short chain dehydrogenase; Provisional	99.87
PRK06123	248	short chain dehydrogenase; Provisional	99.87
PRK12827	249	short chain dehydrogenase; Provisional	99.87
PRK05993	277	short chain dehydrogenase; Provisional	99.87
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.87
PRK07024	257	short chain dehydrogenase; Provisional	99.87
PLN02253	280	xanthoxin dehydrogenase	99.87
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK05717	255	oxidoreductase; Validated	99.87
PRK09186	256	flagellin modification protein A; Provisional	99.87
PRK06500	249	short chain dehydrogenase; Provisional	99.87
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.87
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.87
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.87
PRK06181	263	short chain dehydrogenase; Provisional	99.86
PRK12939	250	short chain dehydrogenase; Provisional	99.86
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.86
PRK06128	300	oxidoreductase; Provisional	99.86
PRK06701	290	short chain dehydrogenase; Provisional	99.86
PRK08643	256	acetoin reductase; Validated	99.86
PRK07454	241	short chain dehydrogenase; Provisional	99.86
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.86
PRK08264	238	short chain dehydrogenase; Validated	99.86
PRK06196	315	oxidoreductase; Provisional	99.86
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK09134	258	short chain dehydrogenase; Provisional	99.86
PRK06841	255	short chain dehydrogenase; Provisional	99.86
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.86
PRK07577	234	short chain dehydrogenase; Provisional	99.86
PRK06398	258	aldose dehydrogenase; Validated	99.85
PRK07856	252	short chain dehydrogenase; Provisional	99.85
PRK09291	257	short chain dehydrogenase; Provisional	99.85
PRK08017	256	oxidoreductase; Provisional	99.85
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK07814	263	short chain dehydrogenase; Provisional	99.85
PRK06114	254	short chain dehydrogenase; Provisional	99.85
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.85
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.85
PRK08251	248	short chain dehydrogenase; Provisional	99.85
PRK06523	260	short chain dehydrogenase; Provisional	99.85
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.85
PRK07825	273	short chain dehydrogenase; Provisional	99.85
PRK06949	258	short chain dehydrogenase; Provisional	99.85
PRK08324	681	short chain dehydrogenase; Validated	99.85
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.85
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.85
PRK08267	260	short chain dehydrogenase; Provisional	99.85
PRK05650	270	short chain dehydrogenase; Provisional	99.85
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.85
PRK12937	245	short chain dehydrogenase; Provisional	99.85
PRK12743	256	oxidoreductase; Provisional	99.85
PRK08226	263	short chain dehydrogenase; Provisional	99.85
PRK05693	274	short chain dehydrogenase; Provisional	99.85
PRK06101	240	short chain dehydrogenase; Provisional	99.85
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.84
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.84
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.84
PRK12747	252	short chain dehydrogenase; Provisional	99.84
PRK07478	254	short chain dehydrogenase; Provisional	99.84
PRK10538	248	malonic semialdehyde reductase; Provisional	99.84
PRK07985	294	oxidoreductase; Provisional	99.84
PRK05867	253	short chain dehydrogenase; Provisional	99.84
PRK07063	260	short chain dehydrogenase; Provisional	99.84
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK05866	293	short chain dehydrogenase; Provisional	99.84
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.84
PRK06057	255	short chain dehydrogenase; Provisional	99.84
PRK07109	334	short chain dehydrogenase; Provisional	99.84
PRK08265	261	short chain dehydrogenase; Provisional	99.84
PRK07326	237	short chain dehydrogenase; Provisional	99.84
PRK07576	264	short chain dehydrogenase; Provisional	99.83
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.83
PRK12742	237	oxidoreductase; Provisional	99.83
PRK07102	243	short chain dehydrogenase; Provisional	99.83
PRK08589	272	short chain dehydrogenase; Validated	99.83
PRK06139	330	short chain dehydrogenase; Provisional	99.83
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.83
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.83
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.83
PRK07035	252	short chain dehydrogenase; Provisional	99.83
PRK07041	230	short chain dehydrogenase; Provisional	99.83
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK06198	260	short chain dehydrogenase; Provisional	99.83
PRK12744	257	short chain dehydrogenase; Provisional	99.83
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.82
PRK06483	236	dihydromonapterin reductase; Provisional	99.82
PRK06172	253	short chain dehydrogenase; Provisional	99.82
PRK05872	296	short chain dehydrogenase; Provisional	99.82
PRK08278	273	short chain dehydrogenase; Provisional	99.82
PRK09242	257	tropinone reductase; Provisional	99.82
PRK07677	252	short chain dehydrogenase; Provisional	99.82
PRK09072	263	short chain dehydrogenase; Provisional	99.82
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.82
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.81
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.81
PRK08339	263	short chain dehydrogenase; Provisional	99.81
PRK06197	306	short chain dehydrogenase; Provisional	99.81
PRK07069	251	short chain dehydrogenase; Validated	99.81
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.81
PRK07904	253	short chain dehydrogenase; Provisional	99.8
PRK06924	251	short chain dehydrogenase; Provisional	99.8
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.79
PRK07023	243	short chain dehydrogenase; Provisional	99.79
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.79
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK08703	239	short chain dehydrogenase; Provisional	99.79
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.79
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK05854	313	short chain dehydrogenase; Provisional	99.78
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PRK07831	262	short chain dehydrogenase; Provisional	99.78
PRK06484	520	short chain dehydrogenase; Validated	99.78
PRK06953	222	short chain dehydrogenase; Provisional	99.78
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.78
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.78
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.78
PRK07832	272	short chain dehydrogenase; Provisional	99.78
PRK05855	582	short chain dehydrogenase; Validated	99.78
COG2910	211	Putative NADH-flavin reductase [General function p	99.78
PRK07578	199	short chain dehydrogenase; Provisional	99.77
PRK06940	275	short chain dehydrogenase; Provisional	99.77
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.77
PRK08177	225	short chain dehydrogenase; Provisional	99.77
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.76
PRK07791	286	short chain dehydrogenase; Provisional	99.76
PRK06125	259	short chain dehydrogenase; Provisional	99.76
PRK12367	245	short chain dehydrogenase; Provisional	99.76
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.76
PRK07201	657	short chain dehydrogenase; Provisional	99.76
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK07062	265	short chain dehydrogenase; Provisional	99.75
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.75
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.75
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.74
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.73
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.72
PRK05884	223	short chain dehydrogenase; Provisional	99.72
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.72
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.72
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.71
PLN02780	320	ketoreductase/ oxidoreductase	99.71
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK05599	246	hypothetical protein; Provisional	99.7
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.7
PRK06484	520	short chain dehydrogenase; Validated	99.69
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.68
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.66
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.66
PRK08862	227	short chain dehydrogenase; Provisional	99.66
PRK08303	305	short chain dehydrogenase; Provisional	99.66
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.66
KOG0725	270	consensus Reductases with broad range of substrate	99.66
PLN00015	308	protochlorophyllide reductase	99.64
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.64
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.63
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.57
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.56
KOG1208	314	consensus Dehydrogenases with different specificit	99.56
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.55
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.54
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.54
COG1028	251	FabG Dehydrogenases with different specificities (	99.54
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.52
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.52
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.51
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.51
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.51
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.5
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.48
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.47
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.42
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.37
PTZ00325	321	malate dehydrogenase; Provisional	99.3
PRK06720	169	hypothetical protein; Provisional	99.24
PLN00106	323	malate dehydrogenase	99.19
PRK08309	177	short chain dehydrogenase; Provisional	99.13
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.1
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.08
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.03
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.99
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.91
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.91
PRK09620	229	hypothetical protein; Provisional	98.81
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.77
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.75
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.66
PRK05086	312	malate dehydrogenase; Provisional	98.64
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.63
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.61
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.55
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.51
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.5
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	98.41
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.33
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.33
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.33
PRK14982	340	acyl-ACP reductase; Provisional	98.3
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.29
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.23
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.15
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.15
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	98.03
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	98.02
COG3268	382	Uncharacterized conserved protein [Function unknow	98.02
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.99
PRK05442	326	malate dehydrogenase; Provisional	97.98
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.96
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.95
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.94
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.86
PRK06223	307	malate dehydrogenase; Reviewed	97.86
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.83
PTZ00117	319	malate dehydrogenase; Provisional	97.82
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.8
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.8
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.78
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.76
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.76
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.75
PLN02602	350	lactate dehydrogenase	97.71
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.69
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.66
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.65
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.65
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.64
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.63
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.63
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.61
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.59
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.58
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.58
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.57
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.54
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.54
PRK04148	134	hypothetical protein; Provisional	97.51
PRK09496	453	trkA potassium transporter peripheral membrane com	97.51
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.39
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.39
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.39
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.36
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.33
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.33
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.32
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.32
PRK09496	453	trkA potassium transporter peripheral membrane com	97.28
PLN02383	344	aspartate semialdehyde dehydrogenase	97.28
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.26
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.26
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.23
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.2
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.17
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	97.17
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.16
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	97.14
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.12
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.09
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.08
PRK10669	558	putative cation:proton antiport protein; Provision	97.06
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.04
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.04
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.99
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.98
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.96
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.96
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.95
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.93
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.92
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.84
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.83
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.83
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.82
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.81
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.8
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.8
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.79
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.79
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.77
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.75
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.75
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.74
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.72
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.72
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.7
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.68
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.66
PRK08223	287	hypothetical protein; Validated	96.65
PRK08655	437	prephenate dehydrogenase; Provisional	96.62
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.6
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.59
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.58
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.58
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.58
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.58
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.55
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.55
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.54
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.53
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.53
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.51
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.5
PRK10537	393	voltage-gated potassium channel; Provisional	96.49
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.48
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.47
PRK08328	231	hypothetical protein; Provisional	96.45
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.45
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.44
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.42
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	96.41
PRK06849	389	hypothetical protein; Provisional	96.4
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.4
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.37
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.36
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.36
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.36
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.32
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.32
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.32
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.31
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.31
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.31
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.29
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.29
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.28
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.26
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.26
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.24
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.24
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.23
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.23
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.22
PRK07877	722	hypothetical protein; Provisional	96.2
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.2
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.17
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.17
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.17
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.17
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.16
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.15
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.14
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.13
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.1
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.1
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.1
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.09
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.08
PRK08818	370	prephenate dehydrogenase; Provisional	96.08
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.06
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.06
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	96.04
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.04
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.03
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.02
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.01
KOG4288	283	consensus Predicted oxidoreductase [General functi	95.99
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.99
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.96
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.94
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.92
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.92
PRK13243	333	glyoxylate reductase; Reviewed	95.91
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	95.91
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.87
PLN02948	577	phosphoribosylaminoimidazole carboxylase	95.86
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	95.84
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	95.84
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.84
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.84
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	95.82
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.81
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	95.81
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.78
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.78
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	95.77
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	95.76
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.75
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	95.74
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	95.74
PRK07417	279	arogenate dehydrogenase; Reviewed	95.73
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.72
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.71

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.5e-52  Score=348.99  Aligned_cols=301  Identities=22%  Similarity=0.257  Sum_probs=257.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVA   87 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a   87 (348)
                      |+||||||+||||||.|.+|++.||+|+++|+-....  .....     .++++++|+.|.+.+.++++  .+|.|||+|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~~idaViHFA   75 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-----QFKFYEGDLLDRALLTAVFEENKIDAVVHFA   75 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-----cCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence            5899999999999999999999999999999854432  11111     16899999999999999886  599999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      |......+.++     |. .+++.|+.||.+|+++|++.+ +++|||.||+.+|+....     .|++|+.+..      
T Consensus        76 a~~~VgESv~~-----Pl-~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~-----~PI~E~~~~~------  137 (329)
T COG1087          76 ASISVGESVQN-----PL-KYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTT-----SPISETSPLA------  137 (329)
T ss_pred             cccccchhhhC-----HH-HHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCC-----cccCCCCCCC------
Confidence            99888887788     86 999999999999999999999 999999999986654443     6999999875      


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCC-------CCCchHHHHHhhhcCCCCccccccc-cc
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTS-------SVPSSIQVLLSPITGDSKFFSILSS-VS  239 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~  239 (348)
                         |.|+||.||++.|.+++.+++.+++++++||.+|+-|.....       ....++..+.+...|+...+.++|. ++
T Consensus       138 ---p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~  214 (329)
T COG1087         138 ---PINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYD  214 (329)
T ss_pred             ---CCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCC
Confidence               889999999999999999999999999999999999975432       2456778888888898877776654 22


Q ss_pred             --cCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccC
Q 035965          240 --NRMGSIALVHIEDICNAHIFLMENDRA---QGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVIS  311 (348)
Q Consensus       240 --~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~  311 (348)
                        .|..+||||||.|+|++.+.+++.-..   ..+||++ +..+|+.|+++.+.++.|. ++|....+.++  +.....|
T Consensus       215 T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~-~ip~~~~~RR~GDpa~l~Ad  293 (329)
T COG1087         215 TKDGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGR-DIPVEIAPRRAGDPAILVAD  293 (329)
T ss_pred             CCCCCeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCC-cCceeeCCCCCCCCceeEeC
Confidence              345699999999999999999885433   2368875 6799999999999999996 88887777665  7788999


Q ss_pred             hHHHH-HcCCcccc-ChhHHHHHHHHHHHH
Q 035965          312 SEKLK-DLGFNYKH-GIEDIICQTIASCVD  339 (348)
Q Consensus       312 ~~~~~-~LG~~p~~-~~~e~l~~~~~~~~~  339 (348)
                      ++|++ .|||+|++ +++++++..++|...
T Consensus       294 ~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~~  323 (329)
T COG1087         294 SSKARQILGWQPTYDDLEDIIKDAWDWHQQ  323 (329)
T ss_pred             HHHHHHHhCCCcccCCHHHHHHHHHHHhhh
Confidence            99999 89999999 999999999999984

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=1.2e-50  Score=348.76  Aligned_cols=315  Identities=41%  Similarity=0.653  Sum_probs=269.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc----ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL----QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ++++|+||||+||||+||++.|+++||+|+++.|++.+.    .+.++.+..++...+.+|+.|.+++..+++++|.|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            568999999999999999999999999999999998763    2444555556799999999999999999999999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +|+++.+..  .+     ++.+.++.++.||.|++++|++...++|+||+||++++.....+...+..++|+.|.+.++.
T Consensus        85 ~Asp~~~~~--~~-----~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~  157 (327)
T KOG1502|consen   85 TASPVDFDL--ED-----PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFC  157 (327)
T ss_pred             eCccCCCCC--CC-----cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHH
Confidence            999987766  22     33478999999999999999999889999999999988876333333578999999998877


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                      ...+   +-|..||..+|+..+.++++.+++.+.+.|+.|+||...+..+.....+...++|.....+ .....      
T Consensus       158 ~~~~---~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~-n~~~~------  227 (327)
T KOG1502|consen  158 RCKK---LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP-NFWLA------  227 (327)
T ss_pred             HhhH---HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC-CCcee------
Confidence            6544   5699999999999999999999999999999999999888767777778888888665544 22222      


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccChHHHHHcC-Ccc
Q 035965          246 ALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISSEKLKDLG-FNY  322 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~LG-~~p  322 (348)
                       |||++|+|++.+.+++++...|+|+|+++..++.|+++++.+.+|..++|....+...  .....++++|++.|| |++
T Consensus       228 -~VdVrDVA~AHv~a~E~~~a~GRyic~~~~~~~~ei~~~l~~~~P~~~ip~~~~~~~~~~~~~~~~~~~k~k~lg~~~~  306 (327)
T KOG1502|consen  228 -FVDVRDVALAHVLALEKPSAKGRYICVGEVVSIKEIADILRELFPDYPIPKKNAEEHEGFLTSFKVSSEKLKSLGGFKF  306 (327)
T ss_pred             -eEeHHHHHHHHHHHHcCcccCceEEEecCcccHHHHHHHHHHhCCCCCCCCCCCccccccccccccccHHHHhccccee
Confidence             9999999999999999999999999999988899999999999998887765555422  334468999999887 777


Q ss_pred             ccChhHHHHHHHHHHHHcCCC
Q 035965          323 KHGIEDIICQTIASCVDCGFL  343 (348)
Q Consensus       323 ~~~~~e~l~~~~~~~~~~~~~  343 (348)
                      + +++|++.++++++++.+++
T Consensus       307 ~-~l~e~~~dt~~sl~~~~~l  326 (327)
T KOG1502|consen  307 R-PLEETLSDTVESLREKGLL  326 (327)
T ss_pred             c-ChHHHHHHHHHHHHHhcCC
Confidence            7 9999999999999999875

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=9.1e-51  Score=337.87  Aligned_cols=304  Identities=18%  Similarity=0.156  Sum_probs=253.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCccccc--cccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQIF--SKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFH   85 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih   85 (348)
                      |++|||||+||||++++++++++.  .+|+.++.-.-.....  ......++..|+++|++|.+.+.++++  .+|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            589999999999999999999885  4577777632211111  112234589999999999999999988  5999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +||-.+.+.+...     |. .++++|+.||.+|||++++....-||+|+||..+|+......   ..++|.++..    
T Consensus        81 fAAESHVDRSI~~-----P~-~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~---~~FtE~tp~~----  147 (340)
T COG1088          81 FAAESHVDRSIDG-----PA-PFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDD---DAFTETTPYN----  147 (340)
T ss_pred             echhccccccccC-----hh-hhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCC---CCcccCCCCC----
Confidence            9999998888788     75 999999999999999999988335999999999877666522   3788999876    


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCccccccccccCCCC
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSILSSVSNRMGS  244 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  244 (348)
                           |.++|+.||+++..+++.|.+++|+++++.|++|-|||.+.+.  .++. .+.+++.|.+.++  .|.+.   |.
T Consensus       148 -----PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE--KlIP~~I~nal~g~~lpv--YGdG~---~i  215 (340)
T COG1088         148 -----PSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE--KLIPLMIINALLGKPLPV--YGDGL---QI  215 (340)
T ss_pred             -----CCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch--hhhHHHHHHHHcCCCCce--ecCCc---ce
Confidence                 8899999999999999999999999999999999999988763  4444 4568888876554  45544   99


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCC-----cccCCCCC--CCccccChHHHH
Q 035965          245 IALVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQ-----TFEGENQS--SVPSVISSEKLK  316 (348)
Q Consensus       245 r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~  316 (348)
                      |||+||+|-|+++..++++...+++||+++ +..+..|+++.|.+.+++ ..|     +.+...++  ...+.+|.+|++
T Consensus       216 RDWl~VeDh~~ai~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~-~~~~~~~li~~V~DRpGHD~RYaid~~Ki~  294 (340)
T COG1088         216 RDWLYVEDHCRAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGK-DKPDYRDLITFVEDRPGHDRRYAIDASKIK  294 (340)
T ss_pred             eeeEEeHhHHHHHHHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCc-cccchhhheEeccCCCCCccceeechHHHh
Confidence            999999999999999999999999998865 589999999999999997 333     34444444  678889999988


Q ss_pred             -HcCCccccChhHHHHHHHHHHHHcC
Q 035965          317 -DLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       317 -~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                       +|||+|+++|+++|+++++||.++.
T Consensus       295 ~eLgW~P~~~fe~GlrkTv~WY~~N~  320 (340)
T COG1088         295 RELGWRPQETFETGLRKTVDWYLDNE  320 (340)
T ss_pred             hhcCCCcCCCHHHHHHHHHHHHHhch
Confidence             9999999999999999999998754

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=1.3e-48  Score=354.03  Aligned_cols=329  Identities=42%  Similarity=0.668  Sum_probs=244.2

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc---ccccCCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI---FSKWTRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      +++++++||||||+||||++|+++|+++|++|++++|+.... ..   .... ..++++++.+|++|.+++.++++++|+
T Consensus         5 ~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~   83 (338)
T PLN00198          5 TPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQ-ELGDLKIFGADLTDEESFEAPIAGCDL   83 (338)
T ss_pred             cCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcC-CCCceEEEEcCCCChHHHHHHHhcCCE
Confidence            456678999999999999999999999999999999876432 11   1111 113588999999999999999999999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI  162 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~  162 (348)
                      |||+|+......  .+     +...++++|+.++.++++++.+.+.+++|||+||.++|+...... ...+++|+.+...
T Consensus        84 vih~A~~~~~~~--~~-----~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~-~~~~~~E~~~~~~  155 (338)
T PLN00198         84 VFHVATPVNFAS--ED-----PENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSG-TGLVMNEKNWTDV  155 (338)
T ss_pred             EEEeCCCCccCC--CC-----hHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCC-CCceeccccCCch
Confidence            999998643211  22     333567999999999999998864478999999998776542100 0235677654332


Q ss_pred             chhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCC
Q 035965          163 HHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRM  242 (348)
Q Consensus       163 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (348)
                      ........|.++|+.||.++|.+++.++++++++++++||++||||+.....+..+..+...+.+....+...+..+..+
T Consensus       156 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  235 (338)
T PLN00198        156 EFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLS  235 (338)
T ss_pred             hhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCcccccccccccccc
Confidence            22112223677899999999999999999899999999999999998754444444334445555443222111111123


Q ss_pred             CCcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCCCCCccccChHHHHHcCCcc
Q 035965          243 GSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLKDLGFNY  322 (348)
Q Consensus       243 ~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p  322 (348)
                      +.|||||++|+|++++.+++++..++.|+++++.+|+.|+++.+.+.++...++..+...+.......|++|++++||+|
T Consensus       236 ~~~~~i~V~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~G~~p  315 (338)
T PLN00198        236 GSISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTDFGDFPSKAKLIISSEKLISEGFSF  315 (338)
T ss_pred             CCcceeEHHHHHHHHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCCCCCCCccccccCCCCccccChHHHHhCCcee
Confidence            45899999999999999999876667788888889999999999999876445544333222334568999999789999


Q ss_pred             ccChhHHHHHHHHHHHHcCCCC
Q 035965          323 KHGIEDIICQTIASCVDCGFLP  344 (348)
Q Consensus       323 ~~~~~e~l~~~~~~~~~~~~~~  344 (348)
                      +++++|+|+++++|+++++++.
T Consensus       316 ~~~l~~gi~~~~~~~~~~~~~~  337 (338)
T PLN00198        316 EYGIEEIYDQTVEYFKAKGLLK  337 (338)
T ss_pred             cCcHHHHHHHHHHHHHHcCCCC
Confidence            9999999999999999988764

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.8e-48  Score=353.90  Aligned_cols=308  Identities=19%  Similarity=0.154  Sum_probs=235.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccccc-----CCCCCeEEEEccCCCcchHHHhhcCC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKW-----TRSDRLRLFQADLQVEGSFDKAVMGC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~   80 (348)
                      -+++|+|||||||||||++|+++|+++|++|++++|.....  ......     ....+++++.+|++|.+.+..+++++
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~   91 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV   91 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence            34678999999999999999999999999999999865322  111100     01236889999999999999999999


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      |+|||+|+......+..+     +. .++++|+.|+.+++++|++.+ +++|||+||+++|+....     .+..|+++.
T Consensus        92 d~ViHlAa~~~~~~~~~~-----~~-~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~~-----~~~~e~~~~  159 (348)
T PRK15181         92 DYVLHQAALGSVPRSLKD-----PI-ATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHPD-----LPKIEERIG  159 (348)
T ss_pred             CEEEECccccCchhhhhC-----HH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCCC-----CCCCCCCCC
Confidence            999999997655443344     54 689999999999999999998 899999999987654332     355665543


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC--CCchHHH-HHhhhcCCCCccccccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS--VPSSIQV-LLSPITGDSKFFSILSS  237 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~  237 (348)
                      .         |.++|+.+|.++|.+++.+.++++++++++||++||||++.+.  ....+.. +.+++.+++.  ...| 
T Consensus       160 ~---------p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i--~~~g-  227 (348)
T PRK15181        160 R---------PLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPI--YING-  227 (348)
T ss_pred             C---------CCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCc--EEeC-
Confidence            3         6678999999999999999888899999999999999987543  1223333 3345555543  2233 


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEe-ccCcChHHHHHHHHHhCCCCCC-----CcccCCCCC--CC
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMENDR---AQGQYICC-VKSCPISEFIDHLKLEYPSSKM-----QTFEGENQS--SV  306 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~-----~~~~~~~~~--~~  306 (348)
                        ++.+.|||+|++|+|++++.++..+.   .+++||++ ++++|+.|+++.+.+.++....     .......++  ..
T Consensus       228 --~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (348)
T PRK15181        228 --DGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVK  305 (348)
T ss_pred             --CCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCccc
Confidence              34589999999999999998776432   45789885 5699999999999998863211     111111111  34


Q ss_pred             ccccChHHHH-HcCCccccChhHHHHHHHHHHHHcC
Q 035965          307 PSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       307 ~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      ...+|+++++ +|||+|+++++|+|+++++|++.+.
T Consensus       306 ~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~~  341 (348)
T PRK15181        306 HSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKH  341 (348)
T ss_pred             ccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhc
Confidence            5678999999 7999999999999999999998653

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=5.5e-48  Score=351.83  Aligned_cols=339  Identities=73%  Similarity=1.160  Sum_probs=244.5

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      .....|+||||||+||||++|+++|+++|++|++++|+..+. .........++++++.+|++|.+.+.++++++|+|||
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   85 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFH   85 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEE
Confidence            344567999999999999999999999999999999876543 2211111124688999999999999999999999999


Q ss_pred             ccccCccccc-cccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           86 VAASMEFDIN-VKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        86 ~a~~~~~~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      +|+....... .....+.+.....++.|+.++.+++++|++.+.+++||++||.++|+.....+.+..+++|+.+.+.+.
T Consensus        86 ~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~  165 (353)
T PLN02896         86 VAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDH  165 (353)
T ss_pred             CCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHH
Confidence            9997544320 111111111123456677999999999988754789999999987764432111124577764433221


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCC
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS  244 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (348)
                      ..+..++.++|+.||+++|.+++.++++++++++++||++||||+.....+.++..+...+.|....++..+..+...+.
T Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  245 (353)
T PLN02896        166 VWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGS  245 (353)
T ss_pred             hhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCc
Confidence            11122355689999999999999999999999999999999999876555555544444444543333323333333346


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCCC-CCccccChHHHHHcCCccc
Q 035965          245 IALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQS-SVPSVISSEKLKDLGFNYK  323 (348)
Q Consensus       245 r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~LG~~p~  323 (348)
                      |||||++|+|++++.+++++..++.|++++.++|+.|+++.+.+.++...++........ ......|++++++|||+|+
T Consensus       246 ~dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lGw~p~  325 (353)
T PLN02896        246 IALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGSIPSEISSKKLRDLGFEYK  325 (353)
T ss_pred             eeEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCCCCCccccccccccCccccccCHHHHHHcCCCcc
Confidence            799999999999999998766667888888899999999999999874323222222111 1234568899899999999


Q ss_pred             cChhHHHHHHHHHHHHcCCCCC
Q 035965          324 HGIEDIICQTIASCVDCGFLPP  345 (348)
Q Consensus       324 ~~~~e~l~~~~~~~~~~~~~~~  345 (348)
                      ++++++|+++++|+++.+.++.
T Consensus       326 ~~l~~~i~~~~~~~~~~~~~~~  347 (353)
T PLN02896        326 YGIEEIIDQTIDCCVDHGFLPQ  347 (353)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCc
Confidence            9999999999999999998753

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=7.6e-48  Score=348.63  Aligned_cols=314  Identities=32%  Similarity=0.525  Sum_probs=242.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--c-cccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--Q-IFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      ..++|+||||||+||||++|+++|+++|++|++++|+..+.  . ........++++++.+|++|.+++.++++++|+||
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   86 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF   86 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence            34678999999999999999999999999999999976532  1 11111112358899999999999999999999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      |+|+...     .+     + ...+++|+.++.+++++|++.+ +++|||+||..++|+..... ...+++|++|.+.+.
T Consensus        87 h~A~~~~-----~~-----~-~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~-~~~~~~E~~~~~~~~  153 (342)
T PLN02214         87 HTASPVT-----DD-----P-EQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRD-PEAVVDESCWSDLDF  153 (342)
T ss_pred             EecCCCC-----CC-----H-HHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCC-CCcccCcccCCChhh
Confidence            9998642     12     3 3789999999999999999988 88999999976565433211 013578887654332


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCC
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS  244 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (348)
                      .   ..|.+.|+.||.++|.+++.++++++++++++||++||||+...........+...+.+....   .     +.+.
T Consensus       154 ~---~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~---~-----~~~~  222 (342)
T PLN02214        154 C---KNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKT---Y-----ANLT  222 (342)
T ss_pred             c---cccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccc---C-----CCCC
Confidence            1   125678999999999999999988899999999999999986643222333333444444322   1     1357


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCC--CCCccccChHHHHHcCCcc
Q 035965          245 IALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQ--SSVPSVISSEKLKDLGFNY  322 (348)
Q Consensus       245 r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~LG~~p  322 (348)
                      |+|||++|+|++++.+++++..++.||++++..++.|+++.+.+.++...+|.......  ......+|++|+++|||+|
T Consensus       223 ~~~i~V~Dva~a~~~al~~~~~~g~yn~~~~~~~~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LG~~p  302 (342)
T PLN02214        223 QAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEF  302 (342)
T ss_pred             cCeeEHHHHHHHHHHHHhCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccCCCCCccccCcHHHHHcCCcc
Confidence            89999999999999999987777899887778999999999999998655554332211  1345568999999999999


Q ss_pred             ccChhHHHHHHHHHHHHcCCCCCC
Q 035965          323 KHGIEDIICQTIASCVDCGFLPPI  346 (348)
Q Consensus       323 ~~~~~e~l~~~~~~~~~~~~~~~~  346 (348)
                      + +++|+|+++++|+++.+.++++
T Consensus       303 ~-~lee~i~~~~~~~~~~~~~~~~  325 (342)
T PLN02214        303 T-STKQSLYDTVKSLQEKGHLAPP  325 (342)
T ss_pred             c-CHHHHHHHHHHHHHHcCCCCCC
Confidence            6 9999999999999999998654

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=6.5e-47  Score=344.65  Aligned_cols=319  Identities=43%  Similarity=0.790  Sum_probs=238.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc---cCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK---WTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ..++||||||+||||++|+++|+++|++|++++|+..+. .....   .....+++++.+|++|.+.+.++++++|+|||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            357899999999999999999999999999999976543 21111   11113588999999999999999999999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +|+......  .+     +....+++|+.++.+++++|.+.+.+++|||+||.++++.....   ...++|+.+.+.+..
T Consensus        84 ~A~~~~~~~--~~-----~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~---~~~~~E~~~~~~~~~  153 (351)
T PLN02650         84 VATPMDFES--KD-----PENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQ---KPVYDEDCWSDLDFC  153 (351)
T ss_pred             eCCCCCCCC--CC-----chhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCC---CCccCcccCCchhhh
Confidence            998653221  22     32367899999999999999987646899999999777654331   112577765433322


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                      .....|.++|+.||.++|.+++.++++++++++++||++||||+........+........+....+   +..    +.|
T Consensus       154 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~r  226 (351)
T PLN02650        154 RRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHY---SII----KQG  226 (351)
T ss_pred             hccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCcccc---CcC----CCc
Confidence            2222355689999999999999999999999999999999999865432222211112222322111   111    358


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCC-CCCccccChHHHHHcCCcccc
Q 035965          246 ALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQ-SSVPSVISSEKLKDLGFNYKH  324 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~LG~~p~~  324 (348)
                      +|+|++|+|++++.+++++..++.|+++++.+|+.|++++|.+.++...+|....... .......|++++++|||+|++
T Consensus       227 ~~v~V~Dva~a~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~  306 (351)
T PLN02650        227 QFVHLDDLCNAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPGIDEDLKSVEFSSKKLTDLGFTFKY  306 (351)
T ss_pred             ceeeHHHHHHHHHHHhcCcCcCceEEecCCCcCHHHHHHHHHHhCcccCCCCCCCCcCcccccccCChHHHHHhCCCCCC
Confidence            9999999999999999987666789888889999999999999887544544332211 134456788998899999999


Q ss_pred             ChhHHHHHHHHHHHHcCCCCC
Q 035965          325 GIEDIICQTIASCVDCGFLPP  345 (348)
Q Consensus       325 ~~~e~l~~~~~~~~~~~~~~~  345 (348)
                      +++|+|+++++|+++.+.++.
T Consensus       307 ~l~egl~~~i~~~~~~~~~~~  327 (351)
T PLN02650        307 SLEDMFDGAIETCREKGLIPL  327 (351)
T ss_pred             CHHHHHHHHHHHHHHcCCCCc
Confidence            999999999999999888743

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.6e-45  Score=331.77  Aligned_cols=312  Identities=35%  Similarity=0.548  Sum_probs=235.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc---cCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK---WTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      +++|||||||||||++|+++|+++|++|+++.|+..+. .....   ....++++++.+|++|.+.+.++++++|+|||+
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   84 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHT   84 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEe
Confidence            57999999999999999999999999999999976543 21111   111246899999999999999999999999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeee-ecCCCCCCCCcccCCCCCCcchh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTIT-AKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~-~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      |+......  .+     +....++.|+.++.+++++|++...++||||+||.++++ +... ...+.+++|+++..+...
T Consensus        85 A~~~~~~~--~~-----~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~-~~~~~~~~E~~~~~p~~~  156 (322)
T PLN02986         85 ASPVFFTV--KD-----PQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPP-IEANDVVDETFFSDPSLC  156 (322)
T ss_pred             CCCcCCCC--CC-----chhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCcc-CCCCCCcCcccCCChHHh
Confidence            99753322  22     333578999999999999999863388999999987653 2211 000246788877543211


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                      .   .+.+.|+.||.++|.+++.+.++++++++++||++||||...+........+...+.+...    .+     .+.|
T Consensus       157 ~---~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~----~~-----~~~~  224 (322)
T PLN02986        157 R---ETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL----FN-----NRFY  224 (322)
T ss_pred             h---ccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC----CC-----CcCc
Confidence            1   2456799999999999999999899999999999999998654322223334444444431    11     2568


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCCC-CCccccChHHHHHcCCcccc
Q 035965          246 ALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQS-SVPSVISSEKLKDLGFNYKH  324 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~LG~~p~~  324 (348)
                      +|||++|+|++++.+++++..++.||++++.+|+.|+++++.+.+|...++........ .....+|++++++|||+|+ 
T Consensus       225 ~~v~v~Dva~a~~~al~~~~~~~~yni~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lg~~~~-  303 (322)
T PLN02986        225 RFVDVRDVALAHIKALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESEMNEMICKVCVEKVKNLGVEFT-  303 (322)
T ss_pred             ceeEHHHHHHHHHHHhcCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccccccCCccCHHHHHHcCCccc-
Confidence            89999999999999999887777999988899999999999999986444432111000 1223489999999999998 


Q ss_pred             ChhHHHHHHHHHHHHcCCC
Q 035965          325 GIEDIICQTIASCVDCGFL  343 (348)
Q Consensus       325 ~~~e~l~~~~~~~~~~~~~  343 (348)
                      +++|+|+++++|+++.|++
T Consensus       304 ~l~e~~~~~~~~~~~~~~~  322 (322)
T PLN02986        304 PMKSSLRDTILSLKEKCLL  322 (322)
T ss_pred             CHHHHHHHHHHHHHHcCCC
Confidence            9999999999999998864

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.5e-45  Score=332.38  Aligned_cols=314  Identities=35%  Similarity=0.526  Sum_probs=236.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc---cCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK---WTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      +|+||||||+||||++|+++|+++|++|++++|+..+. .....   .....+++++.+|++|.+++.++++++|+|||+
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   84 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHT   84 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEe
Confidence            57999999999999999999999999999999876543 21111   111246889999999999999999999999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      |+..........     + ...+++|+.++.+++++|.+....++||++||.+++++.........+++|+.+..+... 
T Consensus        85 A~~~~~~~~~~~-----~-~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~-  157 (325)
T PLN02989         85 ASPVAITVKTDP-----Q-VELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFA-  157 (325)
T ss_pred             CCCCCCCCCCCh-----H-HHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHh-
Confidence            996543221112     2 478899999999999999875336899999998877654310000236788876542211 


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcc
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIA  246 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  246 (348)
                        ..+.+.|+.||.++|.+++.++++++++++++||+++|||+..+........+...+.++.. +   +     .+.|+
T Consensus       158 --~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~---~-----~~~r~  226 (325)
T PLN02989        158 --EERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-F---N-----TTHHR  226 (325)
T ss_pred             --cccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-C---C-----CcCcC
Confidence              11346799999999999999999889999999999999998765322233344455555432 1   1     14688


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccChHHHHHcCCcccc
Q 035965          247 LVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISSEKLKDLGFNYKH  324 (348)
Q Consensus       247 ~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~LG~~p~~  324 (348)
                      |+|++|+|++++.+++++..++.||++++.+|+.|+++++.+.++...++....+.++  ......|++|+++|||.|.+
T Consensus       227 ~i~v~Dva~a~~~~l~~~~~~~~~ni~~~~~s~~ei~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~  306 (325)
T PLN02989        227 FVDVRDVALAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIADRNEDITELNSVTFNVCLDKVKSLGIIEFT  306 (325)
T ss_pred             eeEHHHHHHHHHHHhcCcccCceEEEecCCCCHHHHHHHHHHHCCCCCCCCCCCCcccccccCcCCCHHHHHHcCCCCCC
Confidence            9999999999999999876667899987899999999999999985333221111111  23567889999999999999


Q ss_pred             ChhHHHHHHHHHHHHcCC
Q 035965          325 GIEDIICQTIASCVDCGF  342 (348)
Q Consensus       325 ~~~e~l~~~~~~~~~~~~  342 (348)
                      +++|+|+++++|+++.+.
T Consensus       307 ~l~~gi~~~~~~~~~~~~  324 (325)
T PLN02989        307 PTETSLRDTVLSLKEKCL  324 (325)
T ss_pred             CHHHHHHHHHHHHHHhCC
Confidence            999999999999988764

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2.2e-45  Score=331.04  Aligned_cols=310  Identities=40%  Similarity=0.610  Sum_probs=234.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc---ccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS---KWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      .|+|||||||||||++|+++|+++|++|++++|+..+. ....   .....++++++.+|++|++.+..+++++|+|||+
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   83 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT   83 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence            57899999999999999999999999999999976532 1111   1111247899999999999999999999999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceee-ee-cCCCCCCCCcccCCCCCCcc
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTI-TA-KDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~-~~-~~~~~~~~~~~~E~~~~~~~  163 (348)
                      |+......  .+     +...++++|+.++.+++++|++. + +++|||+||++++ |+ .....  ..+++|+.+..+.
T Consensus        84 A~~~~~~~--~~-----~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~--~~~~~E~~~~~p~  153 (322)
T PLN02662         84 ASPFYHDV--TD-----PQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTP--DVVVDETWFSDPA  153 (322)
T ss_pred             CCcccCCC--CC-----hHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCC--CCcCCcccCCChh
Confidence            98753221  22     32367899999999999999887 5 8899999998643 32 22111  2357777654321


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCC
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMG  243 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (348)
                      ..   ....+.|+.+|.++|.+++.++++++++++++||+++|||+..+........+...+.+.. ..        +.+
T Consensus       154 ~~---~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~--------~~~  221 (322)
T PLN02662        154 FC---EESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TF--------PNA  221 (322)
T ss_pred             Hh---hcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cC--------CCC
Confidence            11   1123579999999999999999889999999999999999865432222233444444432 11        125


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCC-CCCccccChHHHHHcCCcc
Q 035965          244 SIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQ-SSVPSVISSEKLKDLGFNY  322 (348)
Q Consensus       244 ~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~LG~~p  322 (348)
                      .|+|||++|+|++++.+++++...+.||++++.+|+.|+++.+.+.++...+|....... .......|++|+++|||++
T Consensus       222 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~~  301 (322)
T PLN02662        222 SYRWVDVRDVANAHIQAFEIPSASGRYCLVERVVHYSEVVKILHELYPTLQLPEKCADDKPYVPTYQVSKEKAKSLGIEF  301 (322)
T ss_pred             CcCeEEHHHHHHHHHHHhcCcCcCCcEEEeCCCCCHHHHHHHHHHHCCCCCCCCCCCCccccccccccChHHHHHhCCcc
Confidence            788999999999999999987666788888889999999999999988655554322211 2456679999999999998


Q ss_pred             ccChhHHHHHHHHHHHHcCCC
Q 035965          323 KHGIEDIICQTIASCVDCGFL  343 (348)
Q Consensus       323 ~~~~~e~l~~~~~~~~~~~~~  343 (348)
                      + +++|+|+++++|+++++.+
T Consensus       302 ~-~~~~~l~~~~~~~~~~~~~  321 (322)
T PLN02662        302 I-PLEVSLKDTVESLKEKGFL  321 (322)
T ss_pred             c-cHHHHHHHHHHHHHHcCCC
Confidence            6 9999999999999998874

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=1.2e-44  Score=336.55  Aligned_cols=319  Identities=14%  Similarity=0.112  Sum_probs=226.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-c----cc----------cc----cCCCCCeEEEEccCC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-Q----IF----------SK----WTRSDRLRLFQADLQ   68 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~----------~~----~~~~~~~~~~~~Dl~   68 (348)
                      ..++|+||||||+||||+||+++|+++|++|++++|..... .    ..          .+    .....+++++.+|++
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~  123 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC  123 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence            34688999999999999999999999999999988532111 0    00          00    001135889999999


Q ss_pred             CcchHHHhhc--CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcc-eEEEeccceeeeecC
Q 035965           69 VEGSFDKAVM--GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK-RVVLTSSVSTITAKD  145 (348)
Q Consensus        69 d~~~~~~~~~--~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~v~~SS~~~~~~~~  145 (348)
                      |.+.+.++++  ++|+|||+|+.........+ ..  .....+++|+.|+.+++++|++.+ ++ +|||+||..+|+...
T Consensus       124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~-~~--~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~~  199 (442)
T PLN02572        124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMID-RS--RAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTPN  199 (442)
T ss_pred             CHHHHHHHHHhCCCCEEEECCCcccChhhhcC-hh--hHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCCC
Confidence            9999999887  48999999976443322122 00  112557899999999999999988 64 899999998765332


Q ss_pred             CCCCCCCcccCCCC-----CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC------
Q 035965          146 SSGEWRPVVDESCQ-----TPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV------  214 (348)
Q Consensus       146 ~~~~~~~~~~E~~~-----~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~------  214 (348)
                      .      +++|...     ...+.......|.++|+.||.++|.+++.+++.++++++++||++||||++....      
T Consensus       200 ~------~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li  273 (442)
T PLN02572        200 I------DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELI  273 (442)
T ss_pred             C------CCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccc
Confidence            1      2222210     0000000012366789999999999999999999999999999999999865310      


Q ss_pred             ---------CchH-HHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC-C--ceEEEeccCcChHH
Q 035965          215 ---------PSSI-QVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA-Q--GQYICCVKSCPISE  281 (348)
Q Consensus       215 ---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~-~--~~y~~~~~~~s~~e  281 (348)
                               ...+ .++.+...|++.  .+.|   +|++.||||||+|+|++++.+++++.. +  .+||++++.+|+.|
T Consensus       274 ~~~~~~~~~~~~i~~~~~~~~~g~~i--~v~g---~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~e  348 (442)
T PLN02572        274 NRLDYDGVFGTALNRFCVQAAVGHPL--TVYG---KGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNE  348 (442)
T ss_pred             cccCcccchhhHHHHHHHHHhcCCCc--eecC---CCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHH
Confidence                     1122 223344455432  2223   345899999999999999999987533 3  36888778899999


Q ss_pred             HHHHHHHh---CCCCCCCcccCCC--CC--CCccccChHHHHHcCCcccc---ChhHHHHHHHHHHHHcCC
Q 035965          282 FIDHLKLE---YPSSKMQTFEGEN--QS--SVPSVISSEKLKDLGFNYKH---GIEDIICQTIASCVDCGF  342 (348)
Q Consensus       282 l~~~i~~~---~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~LG~~p~~---~~~e~l~~~~~~~~~~~~  342 (348)
                      +++++.+.   +|. +++....+.  .+  ......|++|+++|||+|++   ++.|+|.+++.||+++-+
T Consensus       349 l~~~i~~~~~~~g~-~~~~~~~p~~~~~~~~~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~~~  418 (442)
T PLN02572        349 LAKLVTKAGEKLGL-DVEVISVPNPRVEAEEHYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDRVD  418 (442)
T ss_pred             HHHHHHHHHHhhCC-CCCeeeCCCCcccccccccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhhcc
Confidence            99999998   764 333222211  11  33566789999999999998   999999999999987655

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=1.6e-44  Score=332.82  Aligned_cols=315  Identities=16%  Similarity=0.212  Sum_probs=227.9

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-cccccc--CCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QIFSKW--TRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      ...+.|+|||||||||||++|+++|+++ |++|++++|+..+. .+....  ...++++++.+|++|.+.+.++++++|+
T Consensus        10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~   89 (386)
T PLN02427         10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADL   89 (386)
T ss_pred             CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCE
Confidence            3445689999999999999999999998 59999999875443 221111  1124699999999999999999999999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI  162 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~  162 (348)
                      |||+|+......+..+     +. ..+..|+.++.+++++|++.+  ++|||+||.++|+....     .+.+|+.+...
T Consensus        90 ViHlAa~~~~~~~~~~-----~~-~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~-----~~~~e~~p~~~  156 (386)
T PLN02427         90 TINLAAICTPADYNTR-----PL-DTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIG-----SFLPKDHPLRQ  156 (386)
T ss_pred             EEEcccccChhhhhhC-----hH-HHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcC-----CCCCccccccc
Confidence            9999997554332223     33 556789999999999998876  79999999986654322     23333332211


Q ss_pred             ch-------------hhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCC---------CCCchHHH
Q 035965          163 HH-------------VWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTS---------SVPSSIQV  220 (348)
Q Consensus       163 ~~-------------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~---------~~~~~~~~  220 (348)
                      ..             ..+...|.+.|+.+|.++|.+++.+++.++++++++||++||||+...         ..+..+..
T Consensus       157 ~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~  236 (386)
T PLN02427        157 DPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC  236 (386)
T ss_pred             ccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHH
Confidence            00             001112456899999999999999988889999999999999997532         11223332


Q ss_pred             H-HhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEEec--cCcChHHHHHHHHHhCCCCCC
Q 035965          221 L-LSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYICCV--KSCPISEFIDHLKLEYPSSKM  295 (348)
Q Consensus       221 ~-~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~~~--~~~s~~el~~~i~~~~~~~~~  295 (348)
                      + ...+.+.+..+  .+   ++.+.|+|||++|+|++++.+++++.  .+++||+++  +.+|+.|+++.+.+.+|....
T Consensus       237 ~~~~~~~~~~~~~--~g---~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~  311 (386)
T PLN02427        237 FSNNLLRREPLKL--VD---GGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSG  311 (386)
T ss_pred             HHHHHhcCCCeEE--EC---CCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccc
Confidence            2 34444544322  23   34478999999999999999998863  356898865  389999999999999875211


Q ss_pred             -Cc------ccCCC-------CCCCccccChHHHH-HcCCccccChhHHHHHHHHHHHH
Q 035965          296 -QT------FEGEN-------QSSVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVD  339 (348)
Q Consensus       296 -~~------~~~~~-------~~~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~  339 (348)
                       +.      .....       .+......|.+|++ +|||+|+++++++|+++++|+++
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~  370 (386)
T PLN02427        312 EPALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHK  370 (386)
T ss_pred             cccccccccccCcccccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHH
Confidence             10      01100       11345567999999 79999999999999999999875

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.3e-44  Score=334.78  Aligned_cols=301  Identities=16%  Similarity=0.166  Sum_probs=226.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      +.|||||||||||||++|+++|+++|++|++++|.....  ...... ..++++++.+|+.+..     +.++|+|||+|
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~-----~~~~D~ViHlA  192 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF-GNPRFELIRHDVVEPI-----LLEVDQIYHLA  192 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc-cCCceEEEECcccccc-----ccCCCEEEECc
Confidence            357999999999999999999999999999999854321  111111 1236788899987742     45799999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      +......+..+     + ..++++|+.++.+++++|++.+ . +|||+||.++|+....     .+.+|+.+....+.  
T Consensus       193 a~~~~~~~~~~-----p-~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg~~~~-----~p~~E~~~~~~~p~--  257 (436)
T PLN02166        193 CPASPVHYKYN-----P-VKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLE-----HPQKETYWGNVNPI--  257 (436)
T ss_pred             eeccchhhccC-----H-HHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhCCCCC-----CCCCccccccCCCC--
Confidence            97554332233     4 3789999999999999999988 4 8999999987654322     36777654221111  


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchH-HHHHhhhcCCCCccccccccccCCCCcc
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSI-QVLLSPITGDSKFFSILSSVSNRMGSIA  246 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~  246 (348)
                        .|.+.|+.+|..+|.+++.+++.++++++++||++||||++.......+ .++.+.+.+....+  .|   .+++.|+
T Consensus       258 --~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v--~g---~g~~~rd  330 (436)
T PLN02166        258 --GERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTV--YG---DGKQTRS  330 (436)
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEE--eC---CCCeEEe
Confidence              1567899999999999999998889999999999999998653323333 34455555554322  33   3447899


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccChHHHH-HcCCcc
Q 035965          247 LVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISSEKLK-DLGFNY  322 (348)
Q Consensus       247 ~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~LG~~p  322 (348)
                      |||++|+++++..++++. ..+.||++ ++.+|+.|+++.|++.++. +.++.+.+...  ......|++|++ .|||+|
T Consensus       331 fi~V~Dva~ai~~~~~~~-~~giyNIgs~~~~Si~ela~~I~~~~g~-~~~i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P  408 (436)
T PLN02166        331 FQYVSDLVDGLVALMEGE-HVGPFNLGNPGEFTMLELAEVVKETIDS-SATIEFKPNTADDPHKRKPDISKAKELLNWEP  408 (436)
T ss_pred             eEEHHHHHHHHHHHHhcC-CCceEEeCCCCcEeHHHHHHHHHHHhCC-CCCeeeCCCCCCCccccccCHHHHHHHcCCCC
Confidence            999999999999999865 45789875 5699999999999999985 32322222111  356678999999 799999


Q ss_pred             ccChhHHHHHHHHHHHHc
Q 035965          323 KHGIEDIICQTIASCVDC  340 (348)
Q Consensus       323 ~~~~~e~l~~~~~~~~~~  340 (348)
                      +++++++|+++++|+++.
T Consensus       409 ~~sl~egl~~~i~~~~~~  426 (436)
T PLN02166        409 KISLREGLPLMVSDFRNR  426 (436)
T ss_pred             CCCHHHHHHHHHHHHHHH
Confidence            999999999999999764

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.5e-44  Score=328.66  Aligned_cols=304  Identities=20%  Similarity=0.178  Sum_probs=228.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih~   86 (348)
                      ++|+||||||+||||++|++.|+++|++|++++|+.... ..........+++++.+|++|.+++.+++++  +|+|||+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            468999999999999999999999999999999876543 2111111123577899999999999988874  6999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      |+.........+     +. ..+++|+.++.++++++++.+..++||++||..+|+....    ..+++|+.+..     
T Consensus        83 A~~~~~~~~~~~-----~~-~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~----~~~~~e~~~~~-----  147 (349)
T TIGR02622        83 AAQPLVRKSYAD-----PL-ETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEW----VWGYRETDPLG-----  147 (349)
T ss_pred             CcccccccchhC-----HH-HHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCC----CCCCccCCCCC-----
Confidence            996443332233     43 7889999999999999987654679999999886643322    23567766543     


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHhC-------CCcEEEEecCccccCCCCCCCCchHHHHH-hhhcCCCCcccccccc
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANEN-------KIDLVSVITTTVAGPFLTSSVPSSIQVLL-SPITGDSKFFSILSSV  238 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~~lR~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  238 (348)
                          |.++|+.+|.++|.+++.+++++       +++++++||+++|||++... ...+..+. ....|....+.     
T Consensus       148 ----p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~~~~~~~~~~~~g~~~~~~-----  217 (349)
T TIGR02622       148 ----GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE-DRLIPDVIRAFSSNKIVIIR-----  217 (349)
T ss_pred             ----CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh-hhhhHHHHHHHhcCCCeEEC-----
Confidence                67789999999999999987754       89999999999999975321 22333333 34444443332     


Q ss_pred             ccCCCCcceeeHHHHHHHHHHhhcCC-----CCCceEEEec---cCcChHHHHHHHHHhCCCCCCCcccCC--CCC--CC
Q 035965          239 SNRMGSIALVHIEDICNAHIFLMEND-----RAQGQYICCV---KSCPISEFIDHLKLEYPSSKMQTFEGE--NQS--SV  306 (348)
Q Consensus       239 ~~~~~~r~~i~v~D~a~~~~~~~~~~-----~~~~~y~~~~---~~~s~~el~~~i~~~~~~~~~~~~~~~--~~~--~~  306 (348)
                       .+++.|||+|++|+|++++.++++.     ..++.||+++   ++.|+.|+++.+.+.++..+++.....  ..+  ..
T Consensus       218 -~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  296 (349)
T TIGR02622       218 -NPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEAR  296 (349)
T ss_pred             -CCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccc
Confidence             3458999999999999999887642     2357899863   589999999999998765333322211  111  34


Q ss_pred             ccccChHHHH-HcCCccccChhHHHHHHHHHHHH
Q 035965          307 PSVISSEKLK-DLGFNYKHGIEDIICQTIASCVD  339 (348)
Q Consensus       307 ~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~  339 (348)
                      ....|++|++ +|||+|+++++++|+++++|+++
T Consensus       297 ~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~  330 (349)
T TIGR02622       297 LLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKA  330 (349)
T ss_pred             eeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence            5678999999 79999999999999999999976

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=2.3e-44  Score=327.43  Aligned_cols=308  Identities=18%  Similarity=0.242  Sum_probs=227.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCC-CcchHHHhhcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQ-VEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~d~Vih~a   87 (348)
                      ||+|||||||||||++|+++|+++ |++|++++|+..+. ....    .++++++.+|+. +.+.+.++++++|+|||+|
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~a   76 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN----HPRMHFFEGDITINKEWIEYHVKKCDVILPLV   76 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc----CCCeEEEeCCCCCCHHHHHHHHcCCCEEEECc
Confidence            468999999999999999999986 79999999865432 2211    136899999998 6677878888999999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      +...+.....+     +. ..+++|+.++.+++++|++.+  ++|||+||..+|+....     .+++|+++...  ..+
T Consensus        77 a~~~~~~~~~~-----p~-~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~-----~~~~ee~~~~~--~~~  141 (347)
T PRK11908         77 AIATPATYVKQ-----PL-RVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPD-----EEFDPEASPLV--YGP  141 (347)
T ss_pred             ccCChHHhhcC-----cH-HHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCC-----cCcCccccccc--cCc
Confidence            97654433344     54 778999999999999999877  69999999987653322     35665542110  001


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC------CCchHH-HHHhhhcCCCCcccccccccc
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS------VPSSIQ-VLLSPITGDSKFFSILSSVSN  240 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~  240 (348)
                      ...|.+.|+.+|.++|..++.++++++++++++||+++|||+....      ...++. .+.++..+.+..+  .+   .
T Consensus       142 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~---~  216 (347)
T PRK11908        142 INKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISL--VD---G  216 (347)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEE--ec---C
Confidence            1236678999999999999999988999999999999999986431      122333 3445555554322  22   3


Q ss_pred             CCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEec-c-CcChHHHHHHHHHhCCCCC-C-----CcccCC--------
Q 035965          241 RMGSIALVHIEDICNAHIFLMENDR---AQGQYICCV-K-SCPISEFIDHLKLEYPSSK-M-----QTFEGE--------  301 (348)
Q Consensus       241 ~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~-~-~~s~~el~~~i~~~~~~~~-~-----~~~~~~--------  301 (348)
                      +++.|+|||++|++++++.+++++.   .++.||+++ . .+|+.|+++.|.+.++..+ +     +.....        
T Consensus       217 g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
T PRK11908        217 GSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYG  296 (347)
T ss_pred             CceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccC
Confidence            4589999999999999999998763   366898865 3 7999999999999887421 1     000000        


Q ss_pred             --CCCCCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcCC
Q 035965          302 --NQSSVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCGF  342 (348)
Q Consensus       302 --~~~~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~~  342 (348)
                        .........|++|++ +|||+|+++++++|+++++|+++...
T Consensus       297 ~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~~  340 (347)
T PRK11908        297 KGYQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGHVA  340 (347)
T ss_pred             cCcchhccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence              001234556788888 89999999999999999999987544

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=5.7e-44  Score=326.13  Aligned_cols=309  Identities=18%  Similarity=0.147  Sum_probs=227.0

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ....+|+|||||||||||++|+++|+++||+|++++|..... ...   ....++++.+|++|.+.+..+++++|+|||+
T Consensus        17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~-~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~   92 (370)
T PLN02695         17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH-MSE---DMFCHEFHLVDLRVMENCLKVTKGVDHVFNL   92 (370)
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc-ccc---ccccceEEECCCCCHHHHHHHHhCCCEEEEc
Confidence            334578999999999999999999999999999999865321 110   0113578899999998888888899999999


Q ss_pred             cccCcccccc-ccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           87 AASMEFDINV-KDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        87 a~~~~~~~~~-~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      |+........ ..     + ...+..|+.++.+++++|++.+ +++|||+||..+|+...... ...+++|++..+    
T Consensus        93 Aa~~~~~~~~~~~-----~-~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~-~~~~~~E~~~~p----  160 (370)
T PLN02695         93 AADMGGMGFIQSN-----H-SVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLE-TNVSLKESDAWP----  160 (370)
T ss_pred             ccccCCccccccC-----c-hhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccC-cCCCcCcccCCC----
Confidence            9865432111 11     2 2457789999999999999988 89999999998665432200 012455544211    


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC--CchH-HHHHhhhcCCCCccccccccccCC
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV--PSSI-QVLLSPITGDSKFFSILSSVSNRM  242 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  242 (348)
                         ..|.+.|+.+|.++|.+++.++++++++++++||+++|||+.....  .... .++.+++... ..+...+   .++
T Consensus       161 ---~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~g---~g~  233 (370)
T PLN02695        161 ---AEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTST-DEFEMWG---DGK  233 (370)
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCC-CCeEEeC---CCC
Confidence               1267889999999999999999888999999999999999754321  1112 2233333322 2233223   345


Q ss_pred             CCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC-CCccccChHHHH-HcC
Q 035965          243 GSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS-SVPSVISSEKLK-DLG  319 (348)
Q Consensus       243 ~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~LG  319 (348)
                      +.|+|+|++|+++++..++++. .++.||++ ++.+|+.|+++.+.+..|. +.++...+.+. ......|+++++ .||
T Consensus       234 ~~r~~i~v~D~a~ai~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~-~~~i~~~~~~~~~~~~~~d~sk~~~~lg  311 (370)
T PLN02695        234 QTRSFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENK-KLPIKHIPGPEGVRGRNSDNTLIKEKLG  311 (370)
T ss_pred             eEEeEEeHHHHHHHHHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCC-CCCceecCCCCCccccccCHHHHHHhcC
Confidence            8999999999999999988875 45789875 4699999999999998875 33433222111 234568999999 899


Q ss_pred             CccccChhHHHHHHHHHHHHc
Q 035965          320 FNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       320 ~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      |+|+++++++|+++++|+++.
T Consensus       312 w~p~~~l~e~i~~~~~~~~~~  332 (370)
T PLN02695        312 WAPTMRLKDGLRITYFWIKEQ  332 (370)
T ss_pred             CCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999999999764

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.1e-44  Score=298.78  Aligned_cols=303  Identities=17%  Similarity=0.183  Sum_probs=245.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ..++|+||||.||||||||+.|..+||+|++++...... .........+.++.+..|+..+     ++..+|.|+|+|+
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~IyhLAa  100 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYHLAA  100 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhhhhhhhcc
Confidence            468999999999999999999999999999999854433 2222222345788888887765     6678999999999


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      ..++..+...     |. .++.+|+.++.+.+-.|++.+  +||++.||+.+|+. +.    .-|..|+.|.+.-+++  
T Consensus       101 pasp~~y~~n-----pv-ktIktN~igtln~lglakrv~--aR~l~aSTseVYgd-p~----~hpq~e~ywg~vnpig--  165 (350)
T KOG1429|consen  101 PASPPHYKYN-----PV-KTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGD-PL----VHPQVETYWGNVNPIG--  165 (350)
T ss_pred             CCCCcccccC-----cc-ceeeecchhhHHHHHHHHHhC--ceEEEeecccccCC-cc----cCCCccccccccCcCC--
Confidence            9887766566     65 889999999999999999999  89999999986655 43    3577787776655544  


Q ss_pred             CCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCccccccccccCCCCcce
Q 035965          169 KASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSILSSVSNRMGSIAL  247 (348)
Q Consensus       169 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~  247 (348)
                        |++.|...|+++|.++..|.++.|+.+.|.|++++|||..+....+... ++.+++.+.+..+.  |   .|.|+|+|
T Consensus       166 --pr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~--g---~G~qtRSF  238 (350)
T KOG1429|consen  166 --PRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVY--G---DGKQTRSF  238 (350)
T ss_pred             --chhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEE--c---CCcceEEE
Confidence              5677999999999999999999999999999999999987765555544 45566666664443  3   45599999


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCCC-CCccccChHHHH-HcCCccccC
Q 035965          248 VHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQS-SVPSVISSEKLK-DLGFNYKHG  325 (348)
Q Consensus       248 i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~LG~~p~~~  325 (348)
                      .||.|++++++.+++++..+...+++++.+|+.|+++++.+..+..+.+.+..+-++ +.....|+++++ .|||.|+.+
T Consensus       239 ~yvsD~Vegll~Lm~s~~~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~  318 (350)
T KOG1429|consen  239 QYVSDLVEGLLRLMESDYRGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGWEPKVS  318 (350)
T ss_pred             EeHHHHHHHHHHHhcCCCcCCcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCCCCCCc
Confidence            999999999999999986555444567799999999999999976566555544444 667888999999 899999999


Q ss_pred             hhHHHHHHHHHHHH
Q 035965          326 IEDIICQTIASCVD  339 (348)
Q Consensus       326 ~~e~l~~~~~~~~~  339 (348)
                      |+|+|+.++.|+++
T Consensus       319 L~egL~~t~~~fr~  332 (350)
T KOG1429|consen  319 LREGLPLTVTYFRE  332 (350)
T ss_pred             HHHhhHHHHHHHHH
Confidence            99999999999975

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.6e-44  Score=325.55  Aligned_cols=301  Identities=17%  Similarity=0.197  Sum_probs=227.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---ccccccC-----CCCCeEEEEccCCCcchHHHhhcC--CC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSKWT-----RSDRLRLFQADLQVEGSFDKAVMG--CD   81 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~--~d   81 (348)
                      |+||||||+||||++|+++|+++|++|++++|++...   .......     ...+++++.+|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            5899999999999999999999999999999975421   1111100     123588999999999999998874  69


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCc---ceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESV---KRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      +|||+|+......+...     +. ..+++|+.|+.+++++|++.+ +   .+|||+||.++|+....     .+++|+.
T Consensus        81 ~ViH~Aa~~~~~~~~~~-----~~-~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~~~-----~~~~E~~  148 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEI-----PE-YTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKVQE-----IPQNETT  148 (343)
T ss_pred             EEEECCcccccchhhhC-----hH-HHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCCCC-----CCCCCCC
Confidence            99999997654332223     32 677889999999999999876 4   38999999987654322     4677877


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC-CCchHHH-HHhhhcCCCCcccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS-VPSSIQV-LLSPITGDSKFFSILS  236 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~  236 (348)
                      +..         |.++|+.||.++|.+++.++++++++++..|+.++|||+.... ....+.. +.+...+....+. .|
T Consensus       149 ~~~---------p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g  218 (343)
T TIGR01472       149 PFY---------PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLY-LG  218 (343)
T ss_pred             CCC---------CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCcee-eC
Confidence            544         7789999999999999999998899999999999999975432 2222222 3334445432221 23


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCC-------------------
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQ-------------------  296 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~-------------------  296 (348)
                         .+++.|||||++|+|++++.+++++. .+.||++ ++++|+.|+++.+.+.+|. +.+                   
T Consensus       219 ---~g~~~rd~i~V~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~  293 (343)
T TIGR01472       219 ---NLDAKRDWGHAKDYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGK-TLNWKDKGINEVGRCKETGKVH  293 (343)
T ss_pred             ---CCccccCceeHHHHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCC-CcccccccccccccccccCcee
Confidence               34489999999999999999998764 4689875 5699999999999999985 221                   


Q ss_pred             cccCC--CCC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHHH
Q 035965          297 TFEGE--NQS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVD  339 (348)
Q Consensus       297 ~~~~~--~~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~  339 (348)
                      .....  .++  ......|++|++ +|||+|+++++|+|+++++++++
T Consensus       294 ~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       294 VEIDPRYFRPTEVDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             EEeCccccCCCccchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence            00111  111  334567999999 89999999999999999999874

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=9.7e-44  Score=324.52  Aligned_cols=306  Identities=16%  Similarity=0.164  Sum_probs=226.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEE-EcCCCcccccccc--CCCCCeEEEEccCCCcchHHHhhcC--CCEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHAT-VRDPGKLQIFSKW--TRSDRLRLFQADLQVEGSFDKAVMG--CDGVFH   85 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih   85 (348)
                      |++|||||||||||++|++.|+++|++|+++ +|...........  ....+++++.+|++|.+++.+++++  +|+|||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            4789999999999999999999999886544 4432211111111  1123578899999999999988874  899999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--------CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--------ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +||..........     + ..++++|+.++.+++++|.+.        ..+++|||+||.++|+.... .  ..+++|+
T Consensus        81 ~A~~~~~~~~~~~-----~-~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~-~--~~~~~E~  151 (355)
T PRK10217         81 LAAESHVDRSIDG-----P-AAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHS-T--DDFFTET  151 (355)
T ss_pred             CCcccCcchhhhC-----h-HHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCC-C--CCCcCCC
Confidence            9997654322222     3 478999999999999999863        22579999999886653322 1  2467887


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCcccccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSILS  236 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  236 (348)
                      .+..         |.+.|+.||.++|.+++.++++++++++++||++||||+..+.  ..+. .+.+...+.+.  +..+
T Consensus       152 ~~~~---------p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~--~~~~~~~~~~~~~~~~--~~~g  218 (355)
T PRK10217        152 TPYA---------PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKPL--PVYG  218 (355)
T ss_pred             CCCC---------CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc--cHHHHHHHHHhcCCCc--eEeC
Confidence            6543         6678999999999999999988999999999999999987432  2333 33445555432  2223


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCC--CCc---------ccCCCCC
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSK--MQT---------FEGENQS  304 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~--~~~---------~~~~~~~  304 (348)
                         ++++.|+|+|++|+|+++..++++...++.||++ ++.+|+.|+++.+.+.++...  .|.         ......+
T Consensus       219 ---~g~~~~~~i~v~D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (355)
T PRK10217        219 ---NGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRP  295 (355)
T ss_pred             ---CCCeeeCcCcHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCC
Confidence               4458999999999999999999886667789886 458999999999999886411  111         0011111


Q ss_pred             --CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcC
Q 035965          305 --SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       305 --~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                        .....+|++|++ +|||+|+++++|+|+++++|++.+.
T Consensus       296 ~~~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~~  335 (355)
T PRK10217        296 GHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANE  335 (355)
T ss_pred             CCCcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhCH
Confidence              345678999998 8999999999999999999998764

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=9.8e-44  Score=329.48  Aligned_cols=302  Identities=15%  Similarity=0.152  Sum_probs=224.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      +.|||||||||||||++|+++|+++|++|++++|.....  ..... ....+++++.+|+.+.     ++.++|+|||+|
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~-~~~~~~~~i~~D~~~~-----~l~~~D~ViHlA  191 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHH-FSNPNFELIRHDVVEP-----ILLEVDQIYHLA  191 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhh-ccCCceEEEECCccCh-----hhcCCCEEEEee
Confidence            458999999999999999999999999999998753221  11110 1124688889998775     245799999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      +......+..+     +. .++++|+.++.+++++|++.+ + +|||+||..+|+....     .+.+|+.+....+.  
T Consensus       192 a~~~~~~~~~~-----p~-~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~~~-----~p~~E~~~~~~~P~--  256 (442)
T PLN02206        192 CPASPVHYKFN-----PV-KTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQ-----HPQVETYWGNVNPI--  256 (442)
T ss_pred             eecchhhhhcC-----HH-HHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCCCC-----CCCCccccccCCCC--
Confidence            97654332233     43 789999999999999999988 4 8999999987654322     36667654221111  


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchH-HHHHhhhcCCCCccccccccccCCCCcc
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSI-QVLLSPITGDSKFFSILSSVSNRMGSIA  246 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~  246 (348)
                        .+.+.|+.+|.++|.++..+.+.++++++++||+++|||+........+ .++.+.+.+++..+  .+   .+++.||
T Consensus       257 --~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i--~g---~G~~~rd  329 (442)
T PLN02206        257 --GVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTV--YG---DGKQTRS  329 (442)
T ss_pred             --CccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEE--eC---CCCEEEe
Confidence              1457899999999999999988889999999999999998543222233 33445555554332  23   3458899


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCC--CCCccccChHHHH-HcCCcc
Q 035965          247 LVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQ--SSVPSVISSEKLK-DLGFNY  322 (348)
Q Consensus       247 ~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~LG~~p  322 (348)
                      |+|++|+|++++.++++. ..+.||++ ++++|+.|+++.+++.++. +..+.+.+..  ......+|++|++ +|||+|
T Consensus       330 fi~V~Dva~ai~~a~e~~-~~g~yNIgs~~~~sl~Elae~i~~~~g~-~~~i~~~p~~~~~~~~~~~d~sKa~~~LGw~P  407 (442)
T PLN02206        330 FQFVSDLVEGLMRLMEGE-HVGPFNLGNPGEFTMLELAKVVQETIDP-NAKIEFRPNTEDDPHKRKPDITKAKELLGWEP  407 (442)
T ss_pred             EEeHHHHHHHHHHHHhcC-CCceEEEcCCCceeHHHHHHHHHHHhCC-CCceeeCCCCCCCccccccCHHHHHHHcCCCC
Confidence            999999999999999865 45689876 5699999999999999874 2222221111  1445678999999 899999


Q ss_pred             ccChhHHHHHHHHHHHHcC
Q 035965          323 KHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       323 ~~~~~e~l~~~~~~~~~~~  341 (348)
                      +++++|+|+++++|+++.-
T Consensus       408 ~~~l~egl~~~~~~~~~~~  426 (442)
T PLN02206        408 KVSLRQGLPLMVKDFRQRV  426 (442)
T ss_pred             CCCHHHHHHHHHHHHHHhh
Confidence            9999999999999997643

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.8e-44  Score=296.70  Aligned_cols=305  Identities=19%  Similarity=0.208  Sum_probs=238.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCCC--ccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDPG--KLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVF   84 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vi   84 (348)
                      .++++||||+||||++.+..+...  .++.+.++.-.-  .....+.....++..++.+|+.+...+..+++  .+|.|+
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi   85 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVI   85 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence            479999999999999999999876  456665554211  01111112245689999999999887777765  689999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      |.|+..+...+.-+     +. ++...|+.++..|+++++..|.+++|||+||..+|++...    .....|.+...   
T Consensus        86 hfaa~t~vd~s~~~-----~~-~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~----~~~~~E~s~~n---  152 (331)
T KOG0747|consen   86 HFAAQTHVDRSFGD-----SF-EFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDE----DAVVGEASLLN---  152 (331)
T ss_pred             hhHhhhhhhhhcCc-----hH-HHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccc----cccccccccCC---
Confidence            99999888776666     65 7888899999999999999988999999999998877766    22333666554   


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCccccccccccCCC
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSILSSVSNRMG  243 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  243 (348)
                            |.++|+.+|+++|.+++.|.++++++++++|..+||||++.+.  .++. ++..+..+++-.+.  |   +|.+
T Consensus       153 ------PtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~--klipkFi~l~~~~~~~~i~--g---~g~~  219 (331)
T KOG0747|consen  153 ------PTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE--KLIPKFIKLAMRGKEYPIH--G---DGLQ  219 (331)
T ss_pred             ------CCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH--HHhHHHHHHHHhCCCccee--c---Cccc
Confidence                  8899999999999999999999999999999999999988753  2333 23334445444443  2   3448


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCC----CCCCcc--cCCCCC--CCccccChHH
Q 035965          244 SIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPS----SKMQTF--EGENQS--SVPSVISSEK  314 (348)
Q Consensus       244 ~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~----~~~~~~--~~~~~~--~~~~~~~~~~  314 (348)
                      .|+|+|++|+++++..+++++..+++||++ +..++..|+++.|.+.+..    .+.+..  +-+.++  ...+.++.+|
T Consensus       220 ~rs~l~veD~~ea~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eK  299 (331)
T KOG0747|consen  220 TRSYLYVEDVSEAFKAVLEKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEK  299 (331)
T ss_pred             ceeeEeHHHHHHHHHHHHhcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHH
Confidence            999999999999999999998779999875 5599999999998887643    222221  122222  5678999999


Q ss_pred             HHHcCCccccChhHHHHHHHHHHHHcC
Q 035965          315 LKDLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       315 ~~~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      +|.|||+|+++|+++|+.+++|+.++-
T Consensus       300 ik~LGw~~~~p~~eGLrktie~y~~~~  326 (331)
T KOG0747|consen  300 IKKLGWRPTTPWEEGLRKTIEWYTKNF  326 (331)
T ss_pred             HHhcCCcccCcHHHHHHHHHHHHHhhh
Confidence            999999999999999999999998753

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=4.5e-43  Score=318.10  Aligned_cols=307  Identities=17%  Similarity=0.193  Sum_probs=229.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---cccccc----CCCCCeEEEEccCCCcchHHHhhcC--
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSKW----TRSDRLRLFQADLQVEGSFDKAVMG--   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~--   79 (348)
                      .++|+||||||+||||++|+++|+++|++|++++|+....   ......    ....+++++.+|++|.+++.++++.  
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   83 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK   83 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence            4468999999999999999999999999999999875421   111110    0123588999999999999888874  


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcc-----eEEEeccceeeeecCCCCCCCCcc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK-----RVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-----~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +|+|||+|+..........     + ...+++|+.++.++++++++.+ ++     +|||+||.++|+.. .     .++
T Consensus        84 ~d~Vih~A~~~~~~~~~~~-----~-~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~-~-----~~~  150 (340)
T PLN02653         84 PDEVYNLAAQSHVAVSFEM-----P-DYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGST-P-----PPQ  150 (340)
T ss_pred             CCEEEECCcccchhhhhhC-----h-hHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCC-C-----CCC
Confidence            7999999997654332222     3 3667899999999999999887 43     89999998866532 2     267


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC-CCchHHHHH-hhhcCCCCcc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS-VPSSIQVLL-SPITGDSKFF  232 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~-~~~~~~~~~~  232 (348)
                      +|+.+..         |.+.|+.||.++|.+++.+++++++.++..|+.++|||+.... .+..+..+. +...+....+
T Consensus       151 ~E~~~~~---------p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (340)
T PLN02653        151 SETTPFH---------PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKL  221 (340)
T ss_pred             CCCCCCC---------CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCce
Confidence            7776543         6788999999999999999998999999999999999975432 222232222 3334443322


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCC---CCCcccCCCCC--CC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSS---KMQTFEGENQS--SV  306 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~---~~~~~~~~~~~--~~  306 (348)
                      . .|   ++++.|||+|++|+|++++.++++.. ++.||++ ++++|+.|+++.+.+.++..   .+........+  ..
T Consensus       222 ~-~g---~g~~~rd~i~v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  296 (340)
T PLN02653        222 F-LG---NLDASRDWGFAGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVD  296 (340)
T ss_pred             E-eC---CCcceecceeHHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccc
Confidence            2 23   34589999999999999999998753 5678775 66999999999999998742   11111111111  34


Q ss_pred             ccccChHHHH-HcCCccccChhHHHHHHHHHHHHcCC
Q 035965          307 PSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCGF  342 (348)
Q Consensus       307 ~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~~  342 (348)
                      ....|++|++ +|||+|+++++|+|+++++|+++.-.
T Consensus       297 ~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~~~~  333 (340)
T PLN02653        297 NLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLELAK  333 (340)
T ss_pred             cccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhcC
Confidence            5567999999 89999999999999999999986443

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=3.2e-43  Score=343.20  Aligned_cols=311  Identities=18%  Similarity=0.262  Sum_probs=232.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcch-HHHhhcCCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGS-FDKAVMGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~d~Vih~   86 (348)
                      .+|+|||||||||||+||+++|+++ ||+|++++|..... ....    .++++++.+|++|... +.++++++|+|||+
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~----~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHl  389 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG----HPRFHFVEGDISIHSEWIEYHIKKCDVVLPL  389 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC----CCceEEEeccccCcHHHHHHHhcCCCEEEEC
Confidence            4789999999999999999999985 79999999976432 2211    2468999999998765 56778899999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      ||...+..+..+     +. .++++|+.++.+++++|++.+  ++|||+||.++|+.. .    ..+++|+++...  ..
T Consensus       390 Aa~~~~~~~~~~-----~~-~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~-~----~~~~~E~~~~~~--~~  454 (660)
T PRK08125        390 VAIATPIEYTRN-----PL-RVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMC-T----DKYFDEDTSNLI--VG  454 (660)
T ss_pred             ccccCchhhccC-----HH-HHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCC-C----CCCcCccccccc--cC
Confidence            997665443334     43 678999999999999999987  799999999866533 2    246788765321  11


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC------CCchH-HHHHhhhcCCCCccccccccc
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS------VPSSI-QVLLSPITGDSKFFSILSSVS  239 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~  239 (348)
                      +...|.+.|+.||.++|.+++.+++.++++++++||+++|||++...      ....+ ..+.+...+++..+  .|   
T Consensus       455 p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~--~g---  529 (660)
T PRK08125        455 PINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL--VD---  529 (660)
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEE--eC---
Confidence            11225578999999999999999988899999999999999986431      11223 33444444544322  23   


Q ss_pred             cCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEec-c-CcChHHHHHHHHHhCCCCCCCcccCC-------------
Q 035965          240 NRMGSIALVHIEDICNAHIFLMENDR---AQGQYICCV-K-SCPISEFIDHLKLEYPSSKMQTFEGE-------------  301 (348)
Q Consensus       240 ~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~-~-~~s~~el~~~i~~~~~~~~~~~~~~~-------------  301 (348)
                      .+.+.|||||++|+|++++.+++++.   .+++||+++ + .+|+.|+++.+.+.++..........             
T Consensus       530 ~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  609 (660)
T PRK08125        530 GGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYY  609 (660)
T ss_pred             CCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCcccccccccccccc
Confidence            34589999999999999999998753   255798865 3 69999999999999875221111100             


Q ss_pred             ---CCCCCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcCCCC
Q 035965          302 ---NQSSVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCGFLP  344 (348)
Q Consensus       302 ---~~~~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~~~~  344 (348)
                         .........|++|++ +|||+|+++++|+|+++++|+++..-+.
T Consensus       610 ~~~~~~~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~~~  656 (660)
T PRK08125        610 GKGYQDVEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVDLT  656 (660)
T ss_pred             ccccccccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhccccc
Confidence               001234557999999 8999999999999999999999876653

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=7.2e-43  Score=318.53  Aligned_cols=313  Identities=19%  Similarity=0.226  Sum_probs=234.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-----cccccc-CCCCCeEEEEccCCCcchHHHhhc--C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-----QIFSKW-TRSDRLRLFQADLQVEGSFDKAVM--G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~--~   79 (348)
                      ++++++|+|||||||||++|+++|+++|++|++++|.....     ...... ....+++++.+|++|.+.+..+++  +
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~   81 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR   81 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence            56678999999999999999999999999999998754321     111111 012368899999999999988876  6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      +|+|||+|+..........     + ..++++|+.++.+++++|++.+ +++|||+||+.+|+. ..    ..+++|+.+
T Consensus        82 ~d~vih~a~~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~-~~----~~~~~E~~~  149 (352)
T PLN02240         82 FDAVIHFAGLKAVGESVAK-----P-LLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQ-PE----EVPCTEEFP  149 (352)
T ss_pred             CCEEEEccccCCccccccC-----H-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCC-CC----CCCCCCCCC
Confidence            8999999997543222222     3 3789999999999999999888 889999999875543 22    257888876


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-CCCcEEEEecCccccCCCCC-------CC-CchHHHHHhhhcCCCC
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-NKIDLVSVITTTVAGPFLTS-------SV-PSSIQVLLSPITGDSK  230 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~-------~~-~~~~~~~~~~~~~~~~  230 (348)
                      ..         |.+.|+.+|.++|.+++.++.. .+++++++|++++||++...       .. ..+..++.+...++..
T Consensus       150 ~~---------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  220 (352)
T PLN02240        150 LS---------ATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRP  220 (352)
T ss_pred             CC---------CCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCC
Confidence            54         6678999999999999998754 57999999999999975321       11 1233344455445443


Q ss_pred             ccccccc---cccCCCCcceeeHHHHHHHHHHhhcCC----CC-CceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCC
Q 035965          231 FFSILSS---VSNRMGSIALVHIEDICNAHIFLMEND----RA-QGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGE  301 (348)
Q Consensus       231 ~~~~~~~---~~~~~~~r~~i~v~D~a~~~~~~~~~~----~~-~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~  301 (348)
                      .+...|.   ...+.+.|+|||++|+|++++.++++.    .. ++.||++ ++++|+.|+++.+++.++. +.++....
T Consensus       221 ~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~-~~~~~~~~  299 (352)
T PLN02240        221 ELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGK-KIPLKLAP  299 (352)
T ss_pred             ceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCC-CCCceeCC
Confidence            3433331   124568999999999999999888642    22 4689875 6699999999999999985 44443332


Q ss_pred             CCC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcCC
Q 035965          302 NQS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCGF  342 (348)
Q Consensus       302 ~~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~~  342 (348)
                      ..+  ......|++|++ +|||+|+++++|+|+++++|+++++.
T Consensus       300 ~~~~~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~  343 (352)
T PLN02240        300 RRPGDAEEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNPY  343 (352)
T ss_pred             CCCCChhhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcc
Confidence            222  344567899999 89999999999999999999998764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=2.6e-42  Score=338.48  Aligned_cols=310  Identities=17%  Similarity=0.191  Sum_probs=231.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCCCccccccc--cCCCCCeEEEEccCCCcchHHHhh--cCCCE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDPGKLQIFSK--WTRSDRLRLFQADLQVEGSFDKAV--MGCDG   82 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~   82 (348)
                      .++|+|||||||||||++|+++|+++  |++|++++|..........  ....++++++.+|++|.+.+..++  .++|+
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~   83 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDT   83 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCE
Confidence            34689999999999999999999998  6899999885311111111  012247899999999988887665  57999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI  162 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~  162 (348)
                      |||+|+.........+     +. .+++.|+.++.+++++|++.+.+++|||+||..+|+......  ..+.+|+.+.. 
T Consensus        84 ViHlAa~~~~~~~~~~-----~~-~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~--~~~~~E~~~~~-  154 (668)
T PLN02260         84 IMHFAAQTHVDNSFGN-----SF-EFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDA--DVGNHEASQLL-  154 (668)
T ss_pred             EEECCCccCchhhhhC-----HH-HHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCcccc--ccCccccCCCC-
Confidence            9999998665443233     33 778999999999999999987678999999998765443211  01234544332 


Q ss_pred             chhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHH-HHhhhcCCCCccccccccccC
Q 035965          163 HHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQV-LLSPITGDSKFFSILSSVSNR  241 (348)
Q Consensus       163 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  241 (348)
                              |.+.|+.+|.++|.+++.++++++++++++||++||||++...  ..+.. +.....+..  +++.|.   +
T Consensus       155 --------p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~--~~i~~~~~~a~~g~~--i~i~g~---g  219 (668)
T PLN02260        155 --------PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMQGKP--LPIHGD---G  219 (668)
T ss_pred             --------CCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc--cHHHHHHHHHhCCCC--eEEecC---C
Confidence                    6678999999999999999988899999999999999986532  23332 333444443  332333   3


Q ss_pred             CCCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCC-cccCCCCC--CCccccChHHHHH
Q 035965          242 MGSIALVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQ-TFEGENQS--SVPSVISSEKLKD  317 (348)
Q Consensus       242 ~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~  317 (348)
                      .+.|+|||++|+|+++..++++...+++||+++ +.+|+.|+++.+.+.+|..... ....+.++  ...+.+|++|+++
T Consensus       220 ~~~r~~ihV~Dva~a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~~  299 (668)
T PLN02260        220 SNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKK  299 (668)
T ss_pred             CceEeeEEHHHHHHHHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHHH
Confidence            478999999999999999998876778998864 6899999999999999852211 11111122  3355689999999


Q ss_pred             cCCccccChhHHHHHHHHHHHHcCC
Q 035965          318 LGFNYKHGIEDIICQTIASCVDCGF  342 (348)
Q Consensus       318 LG~~p~~~~~e~l~~~~~~~~~~~~  342 (348)
                      |||+|+++++|+|+++++|++++..
T Consensus       300 lGw~p~~~~~egl~~~i~w~~~~~~  324 (668)
T PLN02260        300 LGWQERTSWEEGLKKTMEWYTSNPD  324 (668)
T ss_pred             cCCCCCCCHHHHHHHHHHHHHhChh
Confidence            9999999999999999999987544

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=1e-41  Score=310.76  Aligned_cols=306  Identities=18%  Similarity=0.171  Sum_probs=223.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCe-EEEEEcCCC--cc-ccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYI-VHATVRDPG--KL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFH   85 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~-V~~~~r~~~--~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih   85 (348)
                      |||||||||||||++|+++|+++|++ |+++++...  .. ....+. ...+++++.+|++|.+++.++++  ++|+|||
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVS-DSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcc-cCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            47999999999999999999999976 555655321  11 111111 12357889999999999998886  4899999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--------CCcceEEEeccceeeeecCCCCC-----CCC
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--------ESVKRVVLTSSVSTITAKDSSGE-----WRP  152 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~~~v~~SS~~~~~~~~~~~~-----~~~  152 (348)
                      +|+..........     + ..++++|+.++.+++++|++.        +.+++|||+||.++|+....+.+     ...
T Consensus        80 ~A~~~~~~~~~~~-----~-~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~  153 (352)
T PRK10084         80 LAAESHVDRSITG-----P-AAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELP  153 (352)
T ss_pred             CCcccCCcchhcC-----c-hhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCC
Confidence            9997544332223     3 478999999999999999874        22568999999987654221000     012


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCc
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKF  231 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~  231 (348)
                      +++|+++..         |.+.|+.||.++|.+++.++++++++++++|+++||||+....  ..+. .+..+..+... 
T Consensus       154 ~~~E~~~~~---------p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~--~~~~~~~~~~~~~~~~-  221 (352)
T PRK10084        154 LFTETTAYA---------PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPL-  221 (352)
T ss_pred             CccccCCCC---------CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc--chHHHHHHHHhcCCCe-
Confidence            356665433         6788999999999999999988999999999999999986431  2233 23344444332 


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCCc------ccCC--C
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQT------FEGE--N  302 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~------~~~~--~  302 (348)
                       ...+   .+++.|+|||++|+|+++..++++...++.||+++ +.+|+.|+++.+++.++.. .|.      ....  .
T Consensus       222 -~~~~---~g~~~~~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~-~p~~~~~~~~~~~~~~  296 (352)
T PRK10084        222 -PIYG---KGDQIRDWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEI-VPKATSYREQITYVAD  296 (352)
T ss_pred             -EEeC---CCCeEEeeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccc-cccccchhhhcccccc
Confidence             2223   34588999999999999999998766677898865 5899999999999998752 111      0100  0


Q ss_pred             CC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcC
Q 035965          303 QS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       303 ~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      .+  ...+.+|++|++ +|||+|+++++++|+++++|++++.
T Consensus       297 ~~~~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~  338 (352)
T PRK10084        297 RPGHDRRYAIDASKISRELGWKPQETFESGIRKTVEWYLANT  338 (352)
T ss_pred             CCCCCceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhCH
Confidence            11  234568999999 7999999999999999999998753

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=5.3e-41  Score=301.84  Aligned_cols=302  Identities=18%  Similarity=0.203  Sum_probs=227.2

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCC--cc-ccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEEE
Q 035965           13 TFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPG--KL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVFH   85 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~--~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih   85 (348)
                      +|+|||||||||++|+++|++.|  ++|++++|...  +. ...... ..++++++.+|++|++++.+++++  +|+|||
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~   79 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE-DNPRYRFVKGDIGDRELVSRLFTEHQPDAVVH   79 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc-cCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEE
Confidence            59999999999999999999987  78998887421  11 111111 123688999999999999998886  899999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +|+..........     + ..++++|+.++.+++++|.+.+...++||+||..+|+....    ..+++|..+..    
T Consensus        80 ~a~~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~----~~~~~e~~~~~----  145 (317)
T TIGR01181        80 FAAESHVDRSISG-----P-AAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEK----GDAFTETTPLA----  145 (317)
T ss_pred             cccccCchhhhhC-----H-HHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCC----CCCcCCCCCCC----
Confidence            9997654332222     3 37789999999999999998752348999999987664433    12567776543    


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCccccccccccCCCC
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSILSSVSNRMGS  244 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  244 (348)
                           |.+.|+.+|..+|.+++.++++.+++++++||+.+|||.....  ..+. .+.+...+..  ++..+   ++++.
T Consensus       146 -----~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~--~~~~~~~~~~~~~~~--~~~~~---~g~~~  213 (317)
T TIGR01181       146 -----PSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE--KLIPLMITNALAGKP--LPVYG---DGQQV  213 (317)
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc--cHHHHHHHHHhcCCC--ceEeC---CCceE
Confidence                 5678999999999999999888899999999999999976532  2333 2334444443  22222   34478


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccChHHHH-HcCC
Q 035965          245 IALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISSEKLK-DLGF  320 (348)
Q Consensus       245 r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~LG~  320 (348)
                      ++|+|++|+|+++..++++...++.||++ ++++|+.|+++++.+.++..+.........+  ...+..|+++++ +|||
T Consensus       214 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~  293 (317)
T TIGR01181       214 RDWLYVEDHCRAIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGW  293 (317)
T ss_pred             EeeEEHHHHHHHHHHHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHhCC
Confidence            99999999999999999887667789885 4589999999999999985222111111111  234468899998 8999


Q ss_pred             ccccChhHHHHHHHHHHHHcC
Q 035965          321 NYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       321 ~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      +|+++++++++++++|+++++
T Consensus       294 ~p~~~~~~~i~~~~~~~~~~~  314 (317)
T TIGR01181       294 APKYTFEEGLRKTVQWYLDNE  314 (317)
T ss_pred             CCCCcHHHHHHHHHHHHHhcc
Confidence            999999999999999998765

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=1.7e-41  Score=303.78  Aligned_cols=287  Identities=18%  Similarity=0.225  Sum_probs=207.4

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCc---chH-HHhhc-----CCCEE
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVE---GSF-DKAVM-----GCDGV   83 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~---~~~-~~~~~-----~~d~V   83 (348)
                      |||||||||||+||+++|+++|++|+++.|+.... ..         ..+..+|+.|.   +++ ..+++     ++|+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~V   72 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF---------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAI   72 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH---------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEE
Confidence            89999999999999999999999877776654322 11         12233455543   332 33332     68999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      ||+|+......  .+     + ..+++.|+.++.+++++|++.+ + +|||+||.++|+....     .+.+|+.+..  
T Consensus        73 ih~A~~~~~~~--~~-----~-~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~~~-----~~~~E~~~~~--  135 (308)
T PRK11150         73 FHEGACSSTTE--WD-----G-KYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTD-----DFIEEREYEK--  135 (308)
T ss_pred             EECceecCCcC--CC-----h-HHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcCCC-----CCCccCCCCC--
Confidence            99998644322  22     3 2578999999999999999988 5 6999999987654322     3566665543  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC--CCchHHHH-HhhhcCCCCcccccccccc
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS--VPSSIQVL-LSPITGDSKFFSILSSVSN  240 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~  240 (348)
                             |.+.|+.+|.++|.+++.++.+.+++++++||++||||+....  .......+ .++..+....+. .|   +
T Consensus       136 -------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~g---~  204 (308)
T PRK11150        136 -------PLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLF-EG---S  204 (308)
T ss_pred             -------CCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEe-cC---C
Confidence                   6678999999999999999888899999999999999986442  22233333 344445433222 12   3


Q ss_pred             CCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCC--CC--CCccccChHHH
Q 035965          241 RMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGEN--QS--SVPSVISSEKL  315 (348)
Q Consensus       241 ~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~  315 (348)
                      +++.|+|+|++|+|++++.++++. .++.||++ ++++|+.|+++.+.+.++...++......  ..  ......|++|+
T Consensus       205 ~~~~r~~i~v~D~a~a~~~~~~~~-~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  283 (308)
T PRK11150        205 ENFKRDFVYVGDVAAVNLWFWENG-VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLKGRYQAFTQADLTKL  283 (308)
T ss_pred             CceeeeeeeHHHHHHHHHHHHhcC-CCCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccccccccceecccCHHHH
Confidence            347899999999999999999875 35789885 55899999999999998742222111111  00  23456899999


Q ss_pred             HHcCCcccc-ChhHHHHHHHHHHH
Q 035965          316 KDLGFNYKH-GIEDIICQTIASCV  338 (348)
Q Consensus       316 ~~LG~~p~~-~~~e~l~~~~~~~~  338 (348)
                      +++||+|+. +++|+|+++++|+.
T Consensus       284 ~~~g~~p~~~~~~~gl~~~~~~~~  307 (308)
T PRK11150        284 RAAGYDKPFKTVAEGVAEYMAWLN  307 (308)
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHhh
Confidence            988999875 99999999999974

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=3.9e-41  Score=305.40  Aligned_cols=308  Identities=16%  Similarity=0.168  Sum_probs=226.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccC-CCCCeEEEEccCCCcchHHHhhc--CCCEEEEc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWT-RSDRLRLFQADLQVEGSFDKAVM--GCDGVFHV   86 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~   86 (348)
                      |+|||||||||||++|+++|+++|++|++++|.....  ....... ...++.++.+|++|.+++.++++  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            4799999999999999999999999999998753322  1111110 12356788999999999988876  58999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      |+..........     + ..++++|+.++.++++++++.+ +++||++||+++|+.. .    ..+++|+++..     
T Consensus        81 a~~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~-~----~~~~~E~~~~~-----  143 (338)
T PRK10675         81 AGLKAVGESVQK-----P-LEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQ-P----KIPYVESFPTG-----  143 (338)
T ss_pred             CccccccchhhC-----H-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCC-C----CCccccccCCC-----
Confidence            987543221222     3 3788999999999999999988 8899999998866432 2    24678877531     


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHhC-CCcEEEEecCccccCCCCCC--------CCchHHHHHhhhcCCCCccccccc
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANEN-KIDLVSVITTTVAGPFLTSS--------VPSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                         .|.+.|+.+|.++|.+++.+++++ +++++++|++++||+.....        ....+..+.+...+....+...+.
T Consensus       144 ---~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (338)
T PRK10675        144 ---TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGN  220 (338)
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCC
Confidence               256789999999999999988764 79999999999999743211        112334444555444333332221


Q ss_pred             ---cccCCCCcceeeHHHHHHHHHHhhcCC--CC-CceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCcc
Q 035965          238 ---VSNRMGSIALVHIEDICNAHIFLMEND--RA-QGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPS  308 (348)
Q Consensus       238 ---~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~-~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~  308 (348)
                         ...+++.|+|||++|+|++++.++++.  .. +++||++ ++.+|+.|+++.+.+.+|. +.+....+...  ....
T Consensus       221 ~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~  299 (338)
T PRK10675        221 DYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAY  299 (338)
T ss_pred             cCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCC-CCCeeeCCCCCCchhhh
Confidence               124568899999999999999998752  22 4589886 5689999999999999986 33332222111  3456


Q ss_pred             ccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          309 VISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       309 ~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      ..|++|++ .|||+|+++++++|+++++|++++
T Consensus       300 ~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~  332 (338)
T PRK10675        300 WADASKADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_pred             hcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence            67999998 899999999999999999999874

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=2.3e-41  Score=302.80  Aligned_cols=286  Identities=17%  Similarity=0.205  Sum_probs=213.6

Q ss_pred             EEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEccccCcc
Q 035965           15 CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAASMEF   92 (348)
Q Consensus        15 lVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~   92 (348)
                      ||||||||||++|+++|+++|++|+++.+.                  ..+|+.|.+++.++++  ++|+|||+|+....
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~   62 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH------------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGG   62 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc------------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecc
Confidence            699999999999999999999998766432                  1389999999988876  57999999997543


Q ss_pred             c-cccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCC
Q 035965           93 D-INVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKAS  171 (348)
Q Consensus        93 ~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  171 (348)
                      . .....     +. .+++.|+.++.+++++|++.+ ++++||+||+.+|+...     ..+++|+++.+..     ..|
T Consensus        63 ~~~~~~~-----~~-~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~-----~~~~~E~~~~~~~-----~~p  125 (306)
T PLN02725         63 IHANMTY-----PA-DFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFA-----PQPIPETALLTGP-----PEP  125 (306)
T ss_pred             cchhhhC-----cH-HHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCC-----CCCCCHHHhccCC-----CCC
Confidence            1 11223     43 788999999999999999988 88999999998765432     2478887643210     013


Q ss_pred             cc-hhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC------CCchHHHHH-hhhcCCCCccccccccccCCC
Q 035965          172 GW-VYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS------VPSSIQVLL-SPITGDSKFFSILSSVSNRMG  243 (348)
Q Consensus       172 ~~-~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  243 (348)
                      .+ .|+.+|.++|.+++.+.+..+++++++||++||||+....      .+.++..+. ....+.+..+ ..+   ++.+
T Consensus       126 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~---~g~~  201 (306)
T PLN02725        126 TNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVV-VWG---SGSP  201 (306)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEE-EcC---CCCe
Confidence            23 5999999999999999888899999999999999985421      111221121 2223333222 122   3457


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccChHHHHHcCC
Q 035965          244 SIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISSEKLKDLGF  320 (348)
Q Consensus       244 ~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~LG~  320 (348)
                      .|+|||++|+++++..++++....+.||++ ++.+|+.|+++.+++.++. +.++.....++  .....+|++++++|||
T Consensus       202 ~~~~i~v~Dv~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~~lg~  280 (306)
T PLN02725        202 LREFLHVDDLADAVVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGF-EGELVWDTSKPDGTPRKLMDSSKLRSLGW  280 (306)
T ss_pred             eeccccHHHHHHHHHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCC-CCceeecCCCCCcccccccCHHHHHHhCC
Confidence            899999999999999999876556678875 5699999999999999874 22222211111  3355689999999999


Q ss_pred             ccccChhHHHHHHHHHHHHc
Q 035965          321 NYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       321 ~p~~~~~e~l~~~~~~~~~~  340 (348)
                      +|+++++|+|+++++|++++
T Consensus       281 ~p~~~~~~~l~~~~~~~~~~  300 (306)
T PLN02725        281 DPKFSLKDGLQETYKWYLEN  300 (306)
T ss_pred             CCCCCHHHHHHHHHHHHHhh
Confidence            99999999999999999865

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=4.9e-41  Score=284.13  Aligned_cols=311  Identities=19%  Similarity=0.211  Sum_probs=243.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-----ccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-----QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~V   83 (348)
                      .++||||||+||||+|.+.+|+++||.|+++|+-....     +...+......+.++.+|++|.+.++++++  .+|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            57899999999999999999999999999999743211     222222234689999999999999999987  58999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      +|+|+......+..+     |. .++..|+.|+.+|++.+++.+ ++.+||.||+.+|+....     .|++|+++..  
T Consensus        82 ~Hfa~~~~vgeS~~~-----p~-~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~-----ip~te~~~t~--  147 (343)
T KOG1371|consen   82 MHFAALAAVGESMEN-----PL-SYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTK-----VPITEEDPTD--  147 (343)
T ss_pred             EeehhhhccchhhhC-----ch-hheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcce-----eeccCcCCCC--
Confidence            999998777776677     75 899999999999999999999 999999999986654433     7999998754  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCcccc--CCCCCC------CCchHHHHHhhhcCCCCccccc
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAG--PFLTSS------VPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G--~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                            .|.++|+.+|.+.|.++.++....++.++.||.++++|  |.....      ...+...+.+..-++.......
T Consensus       148 ------~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~  221 (343)
T KOG1371|consen  148 ------QPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVV  221 (343)
T ss_pred             ------CCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceee
Confidence                  37789999999999999999998889999999999999  422211      1111222233333433333322


Q ss_pred             cc---cccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CC
Q 035965          236 SS---VSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SV  306 (348)
Q Consensus       236 ~~---~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~  306 (348)
                      |+   .-.|++.|++||+-|+|+..+.++.+...   -++||.+ +.+.++.+|+..+.++.|. .+|......+.  ..
T Consensus       222 g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~-~~k~~~v~~R~gdv~  300 (343)
T KOG1371|consen  222 GRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGV-KIKKKVVPRRNGDVA  300 (343)
T ss_pred             cCcccccCCCeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcC-CCCccccCCCCCCce
Confidence            22   11235899999999999999999998654   3478874 5699999999999999987 55554433333  56


Q ss_pred             ccccChHHHH-HcCCccccChhHHHHHHHHHHHHcCC
Q 035965          307 PSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCGF  342 (348)
Q Consensus       307 ~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~~  342 (348)
                      ..+.++++++ +|||+|.++++|+++++++|..+...
T Consensus       301 ~~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~~np~  337 (343)
T KOG1371|consen  301 FVYANPSKAQRELGWKAKYGLQEMLKDLWRWQKQNPS  337 (343)
T ss_pred             eeeeChHHHHHHhCCccccCHHHHHHHHHHHHhcCCC
Confidence            7777888887 99999999999999999999988655

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.5e-40  Score=295.45  Aligned_cols=299  Identities=22%  Similarity=0.259  Sum_probs=232.6

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCC-CEEEEccccCc
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGC-DGVFHVAASME   91 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-d~Vih~a~~~~   91 (348)
                      +|||||||||||++|++.|+++||+|++++|...+.....     .++.++.+|++|.+...++.+.. |+|||+|+...
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~   76 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-----SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSS   76 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-----cccceeeecccchHHHHHHHhcCCCEEEEccccCc
Confidence            4999999999999999999999999999999776541111     36889999999988788888877 99999999876


Q ss_pred             cccccc-cccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCC-CCCcchhhccC
Q 035965           92 FDINVK-DNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESC-QTPIHHVWNKK  169 (348)
Q Consensus        92 ~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~-~~~~~~~~~~~  169 (348)
                      ...... .     + ..++..|+.++.+++++|++.+ ++++||.||.++++....    ..+++|+. +..        
T Consensus        77 ~~~~~~~~-----~-~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~~~----~~~~~E~~~~~~--------  137 (314)
T COG0451          77 VPDSNASD-----P-AEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPP----PLPIDEDLGPPR--------  137 (314)
T ss_pred             hhhhhhhC-----H-HHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCCCC----CCCcccccCCCC--------
Confidence            554211 1     2 2589999999999999999966 999999888776665522    24788873 322        


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCc-hHH-HHHhhhcCCCCccccccccccCCCCcce
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPS-SIQ-VLLSPITGDSKFFSILSSVSNRMGSIAL  247 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~  247 (348)
                       |.++|+.+|+++|..++.+.+.++++++++||++||||++....+. ... .+.+...+.+ .+...+   .+.+.|+|
T Consensus       138 -p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~  212 (314)
T COG0451         138 -PLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEP-IIVIGG---DGSQTRDF  212 (314)
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCC-cceEeC---CCceeEee
Confidence             5558999999999999999988899999999999999998765332 222 2334444554 122122   22367899


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEEecc--CcChHHHHHHHHHhCCCCCCCcccCC--CCC--CCccccChHHHH-HcCC
Q 035965          248 VHIEDICNAHIFLMENDRAQGQYICCVK--SCPISEFIDHLKLEYPSSKMQTFEGE--NQS--SVPSVISSEKLK-DLGF  320 (348)
Q Consensus       248 i~v~D~a~~~~~~~~~~~~~~~y~~~~~--~~s~~el~~~i~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~-~LG~  320 (348)
                      +|++|+++++..+++++... .||++++  ..++.|+++.+++.++.........+  ...  ......|+.+++ .|||
T Consensus       213 i~v~D~a~~~~~~~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~  291 (314)
T COG0451         213 VYVDDVADALLLALENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGW  291 (314)
T ss_pred             EeHHHHHHHHHHHHhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHHhCC
Confidence            99999999999999998777 8888654  79999999999999987322122211  111  567788999998 9999


Q ss_pred             ccccChhHHHHHHHHHHHHcC
Q 035965          321 NYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       321 ~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      .|+.++++++.++++|+....
T Consensus       292 ~p~~~~~~~i~~~~~~~~~~~  312 (314)
T COG0451         292 EPKVSLEEGLADTLEWLLKKL  312 (314)
T ss_pred             CCCCCHHHHHHHHHHHHHHhh
Confidence            999999999999999998754

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=1.9e-40  Score=294.96  Aligned_cols=278  Identities=13%  Similarity=0.041  Sum_probs=208.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAAS   89 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~~   89 (348)
                      |+||||||+||||++|+++|+++| +|++++|...               .+.+|++|.+.+.++++  ++|+|||+|+.
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~---------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~   64 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST---------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAH   64 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc---------------cccCCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence            479999999999999999999999 7998887532               24689999999988887  58999999998


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      .....+..+     +. ..+.+|+.++.+++++|++.+ . ++||+||..+|++...     .|++|+++..        
T Consensus        65 ~~~~~~~~~-----~~-~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy~~~~~-----~p~~E~~~~~--------  123 (299)
T PRK09987         65 TAVDKAESE-----PE-FAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVFPGTGD-----IPWQETDATA--------  123 (299)
T ss_pred             CCcchhhcC-----HH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEECCCCC-----CCcCCCCCCC--------
Confidence            766554444     53 778899999999999999988 4 7999999997765433     4788887654        


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhh-cCCCCccccccccccCCCCccee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPI-TGDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                       |.+.|+.+|+++|.+++.++.    +.+++|++++|||+...    .+..+.+.+ .++...+.  +.. -+.+.+++.
T Consensus       124 -P~~~Yg~sK~~~E~~~~~~~~----~~~ilR~~~vyGp~~~~----~~~~~~~~~~~~~~~~v~--~d~-~g~~~~~~~  191 (299)
T PRK09987        124 -PLNVYGETKLAGEKALQEHCA----KHLIFRTSWVYAGKGNN----FAKTMLRLAKEREELSVI--NDQ-FGAPTGAEL  191 (299)
T ss_pred             -CCCHHHHHHHHHHHHHHHhCC----CEEEEecceecCCCCCC----HHHHHHHHHhcCCCeEEe--CCC-cCCCCCHHH
Confidence             778999999999999987643    67999999999997532    233333333 34333332  220 123556677


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCC--CCC------ccc----CCCCCCCccccChHHH
Q 035965          249 HIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSS--KMQ------TFE----GENQSSVPSVISSEKL  315 (348)
Q Consensus       249 ~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~--~~~------~~~----~~~~~~~~~~~~~~~~  315 (348)
                      +++|+++++..+++.+...++||++ ++.+|+.|+++.|.+.++..  +.+      ...    .....+.+..+|++|+
T Consensus       192 ~~d~~~~~~~~~~~~~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~  271 (299)
T PRK09987        192 LADCTAHAIRVALNKPEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKF  271 (299)
T ss_pred             HHHHHHHHHHHhhccCCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHH
Confidence            7888999999888765556799875 56899999999997754321  111      100    0011156778999999


Q ss_pred             H-HcCCccccChhHHHHHHHHHHHH
Q 035965          316 K-DLGFNYKHGIEDIICQTIASCVD  339 (348)
Q Consensus       316 ~-~LG~~p~~~~~e~l~~~~~~~~~  339 (348)
                      + .|||+|+ +|+|+|+++++.+..
T Consensus       272 ~~~lg~~~~-~~~~~l~~~~~~~~~  295 (299)
T PRK09987        272 QQNFALVLP-DWQVGVKRMLTELFT  295 (299)
T ss_pred             HHHhCCCCc-cHHHHHHHHHHHHhh
Confidence            9 7999997 999999999987643

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=2.2e-39  Score=292.82  Aligned_cols=297  Identities=27%  Similarity=0.402  Sum_probs=227.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      |+|+||||+||||++|++.|+++|++|++++|++.+. ...     ..+++++.+|+.|.+++.++++++|+|||+|+..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-----GLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-----cCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence            4799999999999999999999999999999976543 111     1268899999999999999999999999999854


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA  170 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  170 (348)
                      ....  .+     + ...++.|+.++.++++++++.+ ++++|++||.++|+....    +.+.+|+.+....      .
T Consensus        76 ~~~~--~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~----~~~~~e~~~~~~~------~  136 (328)
T TIGR03466        76 RLWA--PD-----P-EEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGD----GTPADETTPSSLD------D  136 (328)
T ss_pred             ccCC--CC-----H-HHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCC----CCCcCccCCCCcc------c
Confidence            3221  22     3 3788999999999999999887 889999999987664333    2467777654311      1


Q ss_pred             CcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeH
Q 035965          171 SGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI  250 (348)
Q Consensus       171 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v  250 (348)
                      +.+.|+.+|.++|.+++.++++++++++++||+++||++...... ....+...+.+......     +   ..++|+|+
T Consensus       137 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~-----~---~~~~~i~v  207 (328)
T TIGR03466       137 MIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTP-TGRIIVDFLNGKMPAYV-----D---TGLNLVHV  207 (328)
T ss_pred             ccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCc-HHHHHHHHHcCCCceee-----C---CCcceEEH
Confidence            235799999999999999988889999999999999998653211 11223333333321111     1   23579999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccC-------------------CCCC-------
Q 035965          251 EDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEG-------------------ENQS-------  304 (348)
Q Consensus       251 ~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~-------------------~~~~-------  304 (348)
                      +|+|+++..+++++..+..|+++++.+|+.|+++.+.+.+|.. .+....                   ...+       
T Consensus       208 ~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (328)
T TIGR03466       208 DDVAEGHLLALERGRIGERYILGGENLTLKQILDKLAEITGRP-APRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGV  286 (328)
T ss_pred             HHHHHHHHHHHhCCCCCceEEecCCCcCHHHHHHHHHHHhCCC-CCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHH
Confidence            9999999999998766667888888999999999999998852 211100                   0111       


Q ss_pred             ---CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcCCC
Q 035965          305 ---SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCGFL  343 (348)
Q Consensus       305 ---~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~~~  343 (348)
                         .....+|+++++ .|||+|+ +++|+|+++++|++++|++
T Consensus       287 ~~~~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~~~  328 (328)
T TIGR03466       287 RMAKKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRANGYL  328 (328)
T ss_pred             HHHhccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhCCC
Confidence               135678999998 8999997 9999999999999998864

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=8.6e-39  Score=287.18  Aligned_cols=294  Identities=17%  Similarity=0.144  Sum_probs=214.3

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc----CCCEEEEccc
Q 035965           14 FCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM----GCDGVFHVAA   88 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~Vih~a~   88 (348)
                      |||||||||||+++++.|+++|+ +|++++|......+...     ....+..|+.+.+.+..+.+    ++|+|||+|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~   75 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNL-----ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGA   75 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhhhh-----hheeeeccCcchhHHHHHHhhccCCCCEEEECcc
Confidence            69999999999999999999997 78888875432221111     12356788888877776653    7999999999


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      ......  .+     + ...+++|+.++.+++++|++.+ + +|||+||+++|+.. .     .+.+|++..        
T Consensus        76 ~~~~~~--~~-----~-~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~-~-----~~~~e~~~~--------  131 (314)
T TIGR02197        76 CSDTTE--TD-----G-EYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDG-E-----AGFREGREL--------  131 (314)
T ss_pred             ccCccc--cc-----h-HHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCC-C-----CCcccccCc--------
Confidence            754322  22     3 3678999999999999999988 5 79999999866533 2     245555431        


Q ss_pred             CCCcchhHhhHHHHHHHHHHHHH--hCCCcEEEEecCccccCCCCCC--CCchHH-HHHhhhcCCCCccccc-cccccCC
Q 035965          169 KASGWVYVLSKLLSEETAFKFAN--ENKIDLVSVITTTVAGPFLTSS--VPSSIQ-VLLSPITGDSKFFSIL-SSVSNRM  242 (348)
Q Consensus       169 ~~~~~~Y~~sK~~~E~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~  242 (348)
                      ..|.+.|+.+|..+|.+++.+..  ..+++++++||++||||+....  ....+. .+.....+....+... ..+..|+
T Consensus       132 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  211 (314)
T TIGR02197       132 ERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGE  211 (314)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCC
Confidence            12667899999999999987643  2368999999999999986532  222232 3334445544333211 1233567


Q ss_pred             CCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCCcccCCCCC------CCccccChHHH
Q 035965          243 GSIALVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQTFEGENQS------SVPSVISSEKL  315 (348)
Q Consensus       243 ~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~  315 (348)
                      +.|+|+|++|+++++..++.+ ..+++||+++ +++|+.|+++.+.+.+|. +.+......+.      .....+|++|+
T Consensus       212 ~~~~~i~v~D~a~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~  289 (314)
T TIGR02197       212 QLRDFVYVKDVVDVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGK-DEKIEYIPMPEALRGKYQYFTQADITKL  289 (314)
T ss_pred             ceeeeEEHHHHHHHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCC-CCcceeccCccccccccccccccchHHH
Confidence            899999999999999999988 4677998865 599999999999999885 22211111111      23456899999


Q ss_pred             H-HcCCccccChhHHHHHHHHHHH
Q 035965          316 K-DLGFNYKHGIEDIICQTIASCV  338 (348)
Q Consensus       316 ~-~LG~~p~~~~~e~l~~~~~~~~  338 (348)
                      + .|||+|+++++|+|+++++|+.
T Consensus       290 ~~~l~~~p~~~l~~~l~~~~~~~~  313 (314)
T TIGR02197       290 RAAGYYGPFTTLEEGVKDYVQWLL  313 (314)
T ss_pred             HHhcCCCCcccHHHHHHHHHHHHh
Confidence            9 8999999999999999999985

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=2.1e-38  Score=286.28  Aligned_cols=306  Identities=22%  Similarity=0.239  Sum_probs=224.4

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcccc
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAAS   89 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~~   89 (348)
                      ||||||||||||++|+++|+++|++|++++|..... ..........+++++.+|+.+.+++.++++  ++|+|||+|+.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            589999999999999999999999999887643322 111101111257788999999999988876  69999999997


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      .........     + ...++.|+.++.++++++.+.+ ++++|++||.++|+ ...    ..+++|+++..        
T Consensus        81 ~~~~~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g-~~~----~~~~~e~~~~~--------  140 (328)
T TIGR01179        81 IAVGESVQD-----P-LKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYG-EPS----SIPISEDSPLG--------  140 (328)
T ss_pred             cCcchhhcC-----c-hhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcC-CCC----CCCccccCCCC--------
Confidence            543322222     3 3678899999999999999887 78999999988654 332    24677877543        


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHh-CCCcEEEEecCccccCCCCCC-------CCchHHHHHhhhcCCCCccccccc---c
Q 035965          170 ASGWVYVLSKLLSEETAFKFANE-NKIDLVSVITTTVAGPFLTSS-------VPSSIQVLLSPITGDSKFFSILSS---V  238 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---~  238 (348)
                       |.+.|+.+|.++|.+++.++++ .+++++++||+++||+.....       ...++..+.....+....+...+.   .
T Consensus       141 -~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (328)
T TIGR01179       141 -PINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPT  219 (328)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccC
Confidence             6678999999999999999877 789999999999999964321       122333344444333222221121   1


Q ss_pred             ccCCCCcceeeHHHHHHHHHHhhcCC---CCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccCh
Q 035965          239 SNRMGSIALVHIEDICNAHIFLMEND---RAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISS  312 (348)
Q Consensus       239 ~~~~~~r~~i~v~D~a~~~~~~~~~~---~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~  312 (348)
                      .++.+.++|||++|+++++..++++.   ..++.||++ ++++|+.|+++.+++.+|. +.+....+...  ......++
T Consensus       220 ~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~  298 (328)
T TIGR01179       220 PDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGV-DFPVELAPRRPGDPASLVADA  298 (328)
T ss_pred             CCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCC-CcceEeCCCCCccccchhcch
Confidence            24457899999999999999998753   335689885 5699999999999999986 43332212111  23455789


Q ss_pred             HHHH-HcCCccccC-hhHHHHHHHHHHHHc
Q 035965          313 EKLK-DLGFNYKHG-IEDIICQTIASCVDC  340 (348)
Q Consensus       313 ~~~~-~LG~~p~~~-~~e~l~~~~~~~~~~  340 (348)
                      ++++ +|||+|+++ ++++|+++++|++++
T Consensus       299 ~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~  328 (328)
T TIGR01179       299 SKIRRELGWQPKYTDLEIIIKTAWRWESRN  328 (328)
T ss_pred             HHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence            9998 799999997 999999999999764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=1e-38  Score=291.22  Aligned_cols=300  Identities=22%  Similarity=0.363  Sum_probs=214.9

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC------CCCCeEEEEccCCCcchHHHhhcC
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT------RSDRLRLFQADLQVEGSFDKAVMG   79 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~   79 (348)
                      ..+++|+||||||+||||++|+++|+++|++|++++|+..+. .+..+..      ...++.++.+|++|.+++.+++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            346688999999999999999999999999999988875433 2211100      012578899999999999999999


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce-eeeecCCCCCCCCcccCCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS-TITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~-~~~~~~~~~~~~~~~~E~~  158 (348)
                      +|.|||+|+..........     . ....+.|+.++.+++++|++...++||||+||.. .+|+.........+++|+.
T Consensus       129 ~d~V~hlA~~~~~~~~~~~-----~-~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~  202 (367)
T PLN02686        129 CAGVFHTSAFVDPAGLSGY-----T-KSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEES  202 (367)
T ss_pred             ccEEEecCeeecccccccc-----c-chhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCC
Confidence            9999999987543321111     1 2556789999999999999863389999999974 2333211000012467766


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSV  238 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (348)
                      +.+....   ..|.+.|+.||.++|.+++.++++++++++++||++||||+.....+..   +...+.+.. .+  .+. 
T Consensus       203 ~~~~~~~---~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~---~~~~~~g~~-~~--~g~-  272 (367)
T PLN02686        203 WSDESFC---RDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTA---TIAYLKGAQ-EM--LAD-  272 (367)
T ss_pred             CCChhhc---ccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChh---HHHHhcCCC-cc--CCC-
Confidence            5432211   1255679999999999999999888999999999999999864322221   223444432 22  221 


Q ss_pred             ccCCCCcceeeHHHHHHHHHHhhcCC---CCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCC---CCCccccCh
Q 035965          239 SNRMGSIALVHIEDICNAHIFLMEND---RAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQ---SSVPSVISS  312 (348)
Q Consensus       239 ~~~~~~r~~i~v~D~a~~~~~~~~~~---~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~  312 (348)
                          ..++|+||+|+|++++.+++..   ..+++|+++++.+++.|+++.+.+.+|. +.+......+   ....+..|+
T Consensus       273 ----g~~~~v~V~Dva~A~~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~d~~~~~~d~  347 (367)
T PLN02686        273 ----GLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQIGL-PINKIAGNSSSDDTPARFELSN  347 (367)
T ss_pred             ----CCcCeEEHHHHHHHHHHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHcCC-CCCcCCCchhhcCCcccccccH
Confidence                2345999999999999999853   3456788888899999999999999985 3333333222   156788899


Q ss_pred             HHHH-HcCCccccChh
Q 035965          313 EKLK-DLGFNYKHGIE  327 (348)
Q Consensus       313 ~~~~-~LG~~p~~~~~  327 (348)
                      +|++ +|||+|+-.++
T Consensus       348 ~kl~~~l~~~~~~~~~  363 (367)
T PLN02686        348 KKLSRLMSRTRRCCYD  363 (367)
T ss_pred             HHHHHHHHHhhhcccc
Confidence            9999 89999985443

>PLN02583 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.5e-37  Score=276.19  Aligned_cols=286  Identities=27%  Similarity=0.412  Sum_probs=209.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccc----cccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      .+++|||||||||||++|+++|+++||+|++++|+..+..    +..+.....+++++.+|++|.+++.+++.++|.|+|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            3578999999999999999999999999999998643221    111111124688999999999999999999999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      .++......  .+     . ..++++|+.++.+++++|.+...+++||++||.++++..........+++|++|.+..+.
T Consensus        85 ~~~~~~~~~--~~-----~-~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~  156 (297)
T PLN02583         85 CFDPPSDYP--SY-----D-EKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFC  156 (297)
T ss_pred             eCccCCccc--cc-----H-HHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHH
Confidence            876432211  11     2 378999999999999999886437899999998765422110001246888887654332


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                      ..   +...|+.||..+|+.++.++++.+++++++||++||||+.....+        .+.+...... .       ..+
T Consensus       157 ~~---~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~--------~~~~~~~~~~-~-------~~~  217 (297)
T PLN02583        157 RK---FKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP--------YLKGAAQMYE-N-------GVL  217 (297)
T ss_pred             hh---cccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh--------hhcCCcccCc-c-------cCc
Confidence            21   223699999999999999988889999999999999998653211        1122211111 1       234


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEeccCcC-hHHHHHHHHHhCCCCCCCcccCCC-CCCCccccChHHHHHcCCcc
Q 035965          246 ALVHIEDICNAHIFLMENDRAQGQYICCVKSCP-ISEFIDHLKLEYPSSKMQTFEGEN-QSSVPSVISSEKLKDLGFNY  322 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s-~~el~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~LG~~p  322 (348)
                      +||||+|+|++++.+++++...+.|+|+++..+ ..++++++.+.+|..+.|....+. .......++++|+++||+++
T Consensus       218 ~~v~V~Dva~a~~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~~~  296 (297)
T PLN02583        218 VTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPYEMQGSEVYQQRIRNKKLNKLMEDF  296 (297)
T ss_pred             ceEEHHHHHHHHHHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCCcccccCCCccccccChHHHHHhCccc
Confidence            599999999999999998888889999887555 578999999999987665432211 11345678999999999975

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=2.1e-38  Score=284.85  Aligned_cols=276  Identities=20%  Similarity=0.195  Sum_probs=207.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ++|+||||||+||||++|+++|+++|  ++|++++|+..+. .+.... ...+++++.+|++|.+.+.++++++|+|||+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~-~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~   81 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF-PAPCLRFFIGDVRDKERLTRALRGVDYVVHA   81 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh-CCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence            46899999999999999999999986  7899999875433 211111 1146889999999999999999999999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      ||.........+     +. .++++|+.++.+++++|.+.+ +++||++||....    .                    
T Consensus        82 Ag~~~~~~~~~~-----~~-~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~~----~--------------------  130 (324)
T TIGR03589        82 AALKQVPAAEYN-----PF-ECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKAA----N--------------------  130 (324)
T ss_pred             cccCCCchhhcC-----HH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCCC----C--------------------
Confidence            997543332233     43 789999999999999999987 8899999995311    1                    


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHH---HhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCC
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFA---NENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMG  243 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (348)
                          |.++|+.+|.++|.+++.++   ..++++++++||++||||+..     .+..+.+........+++.    .+.+
T Consensus       131 ----p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-----~i~~~~~~~~~~~~~~~i~----~~~~  197 (324)
T TIGR03589       131 ----PINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-----VVPFFKSLKEEGVTELPIT----DPRM  197 (324)
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-----cHHHHHHHHHhCCCCeeeC----CCCc
Confidence                44579999999999998754   356899999999999998642     3444444443332233322    2347


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCCCCCccccChHHHH-HcCCcc
Q 035965          244 SIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLK-DLGFNY  322 (348)
Q Consensus       244 ~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~LG~~p  322 (348)
                      .|+|+|++|++++++.++++...+..|++++..+++.|+++.+.+..+....+...++.  ......|+++++ .|||.|
T Consensus       198 ~r~~i~v~D~a~a~~~al~~~~~~~~~~~~~~~~sv~el~~~i~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~lg~~~  275 (324)
T TIGR03589       198 TRFWITLEQGVNFVLKSLERMLGGEIFVPKIPSMKITDLAEAMAPECPHKIVGIRPGEK--LHEVMITEDDARHTYELGD  275 (324)
T ss_pred             eEeeEEHHHHHHHHHHHHhhCCCCCEEccCCCcEEHHHHHHHHHhhCCeeEeCCCCCch--hHhhhcChhhhhhhcCCCC
Confidence            89999999999999999987544556876677899999999999975432222222211  123557999998 899999


Q ss_pred             ccChhHHHHH
Q 035965          323 KHGIEDIICQ  332 (348)
Q Consensus       323 ~~~~~e~l~~  332 (348)
                      ++++++++..
T Consensus       276 ~~~l~~~~~~  285 (324)
T TIGR03589       276 YYAILPSISF  285 (324)
T ss_pred             eEEEcccccc
Confidence            9999999863

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=1.2e-37  Score=272.62  Aligned_cols=253  Identities=25%  Similarity=0.304  Sum_probs=187.8

Q ss_pred             EEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccCcc
Q 035965           15 CVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEF   92 (348)
Q Consensus        15 lVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~   92 (348)
                      |||||+||||+||+++|+++|  ++|.++++.+....... ....+..+++.+|++|.+++.++++++|+|||+|+....
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~-~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~   79 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKD-LQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPP   79 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchh-hhcccceeEEEeccccHHHHHHHhcCCceEEEeCccccc
Confidence            699999999999999999999  79999998765431111 111223449999999999999999999999999998655


Q ss_pred             ccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCc
Q 035965           93 DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASG  172 (348)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  172 (348)
                      ..  ..     +.+.++++|+.||++++++|++.+ ++++||+||.+++....... .-...+|..+.+       ..+.
T Consensus        80 ~~--~~-----~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~-~~~~~dE~~~~~-------~~~~  143 (280)
T PF01073_consen   80 WG--DY-----PPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGD-PIINGDEDTPYP-------SSPL  143 (280)
T ss_pred             cC--cc-----cHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCC-CcccCCcCCccc-------cccc
Confidence            43  22     345899999999999999999998 99999999999887633211 011234554332       1156


Q ss_pred             chhHhhHHHHHHHHHHHHH---h--CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcce
Q 035965          173 WVYVLSKLLSEETAFKFAN---E--NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIAL  247 (348)
Q Consensus       173 ~~Y~~sK~~~E~~~~~~~~---~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  247 (348)
                      +.|+.||..+|++++++..   +  ..+.+++|||+.||||++....+...    ...+.....+. .|.   +....++
T Consensus       144 ~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~----~~~~~g~~~~~-~g~---~~~~~~~  215 (280)
T PF01073_consen  144 DPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLV----KMVRSGLFLFQ-IGD---GNNLFDF  215 (280)
T ss_pred             CchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhh----HHHHhccccee-ecC---CCceECc
Confidence            6899999999999999865   2  24999999999999999876433332    22222211121 222   2367889


Q ss_pred             eeHHHHHHHHHHhhcC---C-----CCCceEEEecc-CcC-hHHHHHHHHHhCCC
Q 035965          248 VHIEDICNAHIFLMEN---D-----RAQGQYICCVK-SCP-ISEFIDHLKLEYPS  292 (348)
Q Consensus       248 i~v~D~a~~~~~~~~~---~-----~~~~~y~~~~~-~~s-~~el~~~i~~~~~~  292 (348)
                      +|++|+|.+++++++.   +     ..++.|+++++ +.. +.|+++.+.+.+|.
T Consensus       216 vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~  270 (280)
T PF01073_consen  216 VYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGY  270 (280)
T ss_pred             EeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCC
Confidence            9999999999988653   2     23557888755 888 99999999999986

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=5.6e-37  Score=271.91  Aligned_cols=268  Identities=21%  Similarity=0.181  Sum_probs=203.3

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEEEccccC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVFHVAASM   90 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih~a~~~   90 (348)
                      ||||||||||||++|+++|+++|++|++++|.                   .+|+.|.+++.+++++  +|+|||+|+..
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-------------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~   61 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-------------------QLDLTDPEALERLLRAIRPDAVVNTAAYT   61 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-------------------ccCCCCHHHHHHHHHhCCCCEEEECCccc
Confidence            58999999999999999999999999999884                   3789999999998876  49999999975


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA  170 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  170 (348)
                      ........     + ...++.|+.++.++++++++.+ . +||++||.++|++...     .+++|+++..         
T Consensus        62 ~~~~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~~~-----~~~~E~~~~~---------  119 (287)
T TIGR01214        62 DVDGAESD-----P-EKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVFDGEGK-----RPYREDDATN---------  119 (287)
T ss_pred             cccccccC-----H-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeeecCCCC-----CCCCCCCCCC---------
Confidence            43322122     3 3678999999999999999887 4 8999999987654322     4788877543         


Q ss_pred             CcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeH
Q 035965          171 SGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI  250 (348)
Q Consensus       171 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v  250 (348)
                      |.+.|+.+|..+|..++.+    +++++++||++|||++....   ....+...+.+.. .+...+     ++.++++|+
T Consensus       120 ~~~~Y~~~K~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~-~~~~~~-----~~~~~~v~v  186 (287)
T TIGR01214       120 PLNVYGQSKLAGEQAIRAA----GPNALIVRTSWLYGGGGGRN---FVRTMLRLAGRGE-ELRVVD-----DQIGSPTYA  186 (287)
T ss_pred             CcchhhHHHHHHHHHHHHh----CCCeEEEEeeecccCCCCCC---HHHHHHHHhhcCC-CceEec-----CCCcCCcCH
Confidence            5678999999999998875    67999999999999985321   2222233222222 222222     246789999


Q ss_pred             HHHHHHHHHhhcCC-CCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcc--------cC--CCCC--CCccccChHHHH
Q 035965          251 EDICNAHIFLMEND-RAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTF--------EG--ENQS--SVPSVISSEKLK  316 (348)
Q Consensus       251 ~D~a~~~~~~~~~~-~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~--------~~--~~~~--~~~~~~~~~~~~  316 (348)
                      +|+|+++..+++++ ..++.||++ ++.+|+.|+++.+.+.++....+..        ..  ..+.  .....+|++|++
T Consensus       187 ~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  266 (287)
T TIGR01214       187 KDLARVIAALLQRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLV  266 (287)
T ss_pred             HHHHHHHHHHHhhccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHH
Confidence            99999999999886 457889876 5689999999999999986332111        00  0001  345679999999


Q ss_pred             -HcCCccccChhHHHHHHHH
Q 035965          317 -DLGFNYKHGIEDIICQTIA  335 (348)
Q Consensus       317 -~LG~~p~~~~~e~l~~~~~  335 (348)
                       .|||.+. +++++|.++++
T Consensus       267 ~~lg~~~~-~~~~~l~~~~~  285 (287)
T TIGR01214       267 KTLGTPLP-HWREALRAYLQ  285 (287)
T ss_pred             HHcCCCCc-cHHHHHHHHHh
Confidence             7999665 99999998875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=3.2e-36  Score=276.53  Aligned_cols=282  Identities=15%  Similarity=0.137  Sum_probs=206.0

Q ss_pred             CCCeEEEe----CCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccccc-----C-CCCCeEEEEccCCCcchHHHhh-
Q 035965           10 RSKTFCVT----GANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKW-----T-RSDRLRLFQADLQVEGSFDKAV-   77 (348)
Q Consensus        10 ~~~~ilVt----GatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~-----~-~~~~~~~~~~Dl~d~~~~~~~~-   77 (348)
                      ++++||||    |||||||++|+++|+++||+|++++|+.... ......     . ...+++++.+|+.|   +.+++ 
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~  127 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVA  127 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhc
Confidence            46789999    9999999999999999999999999986532 111000     0 11358899999987   33333 


Q ss_pred             -cCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           78 -MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        78 -~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                       .++|+|||+++.        +              ..++.+++++|++.+ +++|||+||.++|+....     .+..|
T Consensus       128 ~~~~d~Vi~~~~~--------~--------------~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~-----~p~~E  179 (378)
T PLN00016        128 GAGFDVVYDNNGK--------D--------------LDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDE-----PPHVE  179 (378)
T ss_pred             cCCccEEEeCCCC--------C--------------HHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCC-----CCCCC
Confidence             479999998652        1              345788999999998 999999999987654322     35666


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                      .++..         |   +. +|..+|.+++.    .+++++++||+++|||+.....  ...++.+...+.+..++  +
T Consensus       180 ~~~~~---------p---~~-sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~~~~--~~~~~~~~~~~~~i~~~--g  238 (378)
T PLN00016        180 GDAVK---------P---KA-GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNNKDC--EEWFFDRLVRGRPVPIP--G  238 (378)
T ss_pred             CCcCC---------C---cc-hHHHHHHHHHH----cCCCeEEEeceeEECCCCCCch--HHHHHHHHHcCCceeec--C
Confidence            65432         2   22 89999988754    5899999999999999765321  11223344445443332  2


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCCC-CceEEEec-cCcChHHHHHHHHHhCCCCCCCcc-cCCC---------CC
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDRA-QGQYICCV-KSCPISEFIDHLKLEYPSSKMQTF-EGEN---------QS  304 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~-~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~-~~~~---------~~  304 (348)
                         .+.+.++|+|++|+|+++..+++++.. ++.||+++ +.+|+.|+++.+.+.+|... .+. +...         .+
T Consensus       239 ---~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~-~i~~~~~~~~~~~~~~~~p  314 (378)
T PLN00016        239 ---SGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPE-EIVHYDPKAVGFGAKKAFP  314 (378)
T ss_pred             ---CCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCC-ceeecCccccCcccccccc
Confidence               334789999999999999999998643 56898865 58999999999999998622 211 1000         01


Q ss_pred             --CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcCCCCCCC
Q 035965          305 --SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCGFLPPIL  347 (348)
Q Consensus       305 --~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~~~~~~~  347 (348)
                        ......|++|++ +|||+|+++++|+|+++++|++.++.+++.+
T Consensus       315 ~~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~~~~~  360 (378)
T PLN00016        315 FRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRDRKEA  360 (378)
T ss_pred             ccccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCcccc
Confidence              234456999999 8999999999999999999999999876543

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=2.3e-37  Score=272.50  Aligned_cols=269  Identities=22%  Similarity=0.215  Sum_probs=192.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAAS   89 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~~   89 (348)
                      ||||||||+||||++|+++|.++|++|++++|.                   ..|+.|.+.+.+.++  .+|+|||+||.
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-------------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~   61 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-------------------DLDLTDPEAVAKLLEAFKPDVVINCAAY   61 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-------------------CS-TTSHHHHHHHHHHH--SEEEE----
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-------------------hcCCCCHHHHHHHHHHhCCCeEecccee
Confidence            689999999999999999999999999999775                   388999999988876  58999999999


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      .....++..     ++ ..+.+|+.++.+|.++|.+.+  .++||+||..+|.+...     .+++|++...        
T Consensus        62 ~~~~~ce~~-----p~-~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFdG~~~-----~~y~E~d~~~--------  120 (286)
T PF04321_consen   62 TNVDACEKN-----PE-EAYAINVDATKNLAEACKERG--ARLIHISTDYVFDGDKG-----GPYTEDDPPN--------  120 (286)
T ss_dssp             --HHHHHHS-----HH-HHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SSTS-----SSB-TTS-----------
T ss_pred             ecHHhhhhC-----hh-hhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEcCCcc-----cccccCCCCC--------
Confidence            887777677     75 899999999999999999998  69999999998877644     5799988765        


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhc-CCCCccccccccccCCCCccee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPIT-GDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                       |.+.||.+|+.+|..++....    +.+++|++++||+...    .++..+.+.+. ++...+.       .++.++.+
T Consensus       121 -P~~~YG~~K~~~E~~v~~~~~----~~~IlR~~~~~g~~~~----~~~~~~~~~~~~~~~i~~~-------~d~~~~p~  184 (286)
T PF04321_consen  121 -PLNVYGRSKLEGEQAVRAACP----NALILRTSWVYGPSGR----NFLRWLLRRLRQGEPIKLF-------DDQYRSPT  184 (286)
T ss_dssp             --SSHHHHHHHHHHHHHHHH-S----SEEEEEE-SEESSSSS----SHHHHHHHHHHCTSEEEEE-------SSCEE--E
T ss_pred             -CCCHHHHHHHHHHHHHHHhcC----CEEEEecceecccCCC----chhhhHHHHHhcCCeeEee-------CCceeCCE
Confidence             889999999999999998533    8999999999999332    24444444443 3332222       23567799


Q ss_pred             eHHHHHHHHHHhhcCCCC----CceEEEe-ccCcChHHHHHHHHHhCCCCC---CCcccCCC----CCCCccccChHHHH
Q 035965          249 HIEDICNAHIFLMENDRA----QGQYICC-VKSCPISEFIDHLKLEYPSSK---MQTFEGEN----QSSVPSVISSEKLK  316 (348)
Q Consensus       249 ~v~D~a~~~~~~~~~~~~----~~~y~~~-~~~~s~~el~~~i~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~  316 (348)
                      |++|+|+++..++++...    .|+|+++ ++.+|..|+++.+++.++...   .|....+.    ..+.+..+|++|++
T Consensus       185 ~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~  264 (286)
T PF04321_consen  185 YVDDLARVILELIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLK  264 (286)
T ss_dssp             EHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHH
T ss_pred             EHHHHHHHHHHHHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHH
Confidence            999999999999997643    6899875 568999999999999987533   11111111    11678899999999


Q ss_pred             -HcCCccccChhHHHHHHHHHH
Q 035965          317 -DLGFNYKHGIEDIICQTIASC  337 (348)
Q Consensus       317 -~LG~~p~~~~~e~l~~~~~~~  337 (348)
                       .||++++ +|+++|+++++.+
T Consensus       265 ~~~g~~~~-~~~~~l~~~~~~~  285 (286)
T PF04321_consen  265 NLLGIKPP-PWREGLEELVKQY  285 (286)
T ss_dssp             HCTTS----BHHHHHHHHHHHH
T ss_pred             HccCCCCc-CHHHHHHHHHHHh
Confidence             6799999 9999999999865

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=9.9e-36  Score=252.95  Aligned_cols=268  Identities=19%  Similarity=0.182  Sum_probs=218.3

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEccccC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAASM   90 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~~~   90 (348)
                      +|||||++|++|++|++.|. .+++|++++|..                   .|++|++.+.++++  .+|+|||+|+..
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-------------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt   61 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRAE-------------------LDITDPDAVLEVIRETRPDVVINAAAYT   61 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-------------------ccccChHHHHHHHHhhCCCEEEECcccc
Confidence            49999999999999999998 779999999854                   89999999999887  589999999999


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA  170 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  170 (348)
                      ..+.++.+     ++ ..+.+|+.++.++.++|.+.|  -++||+||.+++.+...     .++.|++...         
T Consensus        62 ~vD~aE~~-----~e-~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~~~-----~~Y~E~D~~~---------  119 (281)
T COG1091          62 AVDKAESE-----PE-LAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGEKG-----GPYKETDTPN---------  119 (281)
T ss_pred             ccccccCC-----HH-HHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCCCC-----CCCCCCCCCC---------
Confidence            98887777     65 899999999999999999999  78999999999887764     5899998776         


Q ss_pred             CcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeH
Q 035965          171 SGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI  250 (348)
Q Consensus       171 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v  250 (348)
                      |.+.||.||+++|..++.+.    -+.+++|.+++||....+    +...+.+....+.....      --+|..+.+++
T Consensus       120 P~nvYG~sKl~GE~~v~~~~----~~~~I~Rtswv~g~~g~n----Fv~tml~la~~~~~l~v------v~Dq~gsPt~~  185 (281)
T COG1091         120 PLNVYGRSKLAGEEAVRAAG----PRHLILRTSWVYGEYGNN----FVKTMLRLAKEGKELKV------VDDQYGSPTYT  185 (281)
T ss_pred             ChhhhhHHHHHHHHHHHHhC----CCEEEEEeeeeecCCCCC----HHHHHHHHhhcCCceEE------ECCeeeCCccH
Confidence            88999999999999998864    579999999999997632    34445555544432222      11355668999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEEecc-CcChHHHHHHHHHhCCCCC--C-CcccCCC----CCCCccccChHHHH-HcCCc
Q 035965          251 EDICNAHIFLMENDRAQGQYICCVK-SCPISEFIDHLKLEYPSSK--M-QTFEGEN----QSSVPSVISSEKLK-DLGFN  321 (348)
Q Consensus       251 ~D~a~~~~~~~~~~~~~~~y~~~~~-~~s~~el~~~i~~~~~~~~--~-~~~~~~~----~~~~~~~~~~~~~~-~LG~~  321 (348)
                      .|+|+++..++......++|++++. ..|+.|+++.|.+..+...  . +....+.    +.+.+..++++|++ .+|+.
T Consensus       186 ~dlA~~i~~ll~~~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~  265 (281)
T COG1091         186 EDLADAILELLEKEKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLS  265 (281)
T ss_pred             HHHHHHHHHHHhccccCcEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCC
Confidence            9999999999998877889988655 6799999999999987311  1 2211111    11567789999999 78999


Q ss_pred             cccChhHHHHHHHHHH
Q 035965          322 YKHGIEDIICQTIASC  337 (348)
Q Consensus       322 p~~~~~e~l~~~~~~~  337 (348)
                      |. +|++.++.+++.+
T Consensus       266 ~~-~w~~~l~~~~~~~  280 (281)
T COG1091         266 LP-EWREALKALLDEL  280 (281)
T ss_pred             Cc-cHHHHHHHHHhhc
Confidence            99 9999999988753

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=1.3e-35  Score=260.86  Aligned_cols=306  Identities=24%  Similarity=0.283  Sum_probs=229.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCccccccccC--CCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQIFSKWT--RSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      +++.+++||||+||+|.||+++|++++  .+|++++..+....+.....  ....++++.+|+.|...+..+++++ .|+
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv   80 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV   80 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence            346799999999999999999999998  89999998776332221111  2457999999999999999999999 888


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      |+|+...+.....+     + +.++++||.||.+++++|++.+ ++++||+||.+++.+...    ....+|+.+.+.  
T Consensus        81 h~aa~~~~~~~~~~-----~-~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~----~~n~~E~~p~p~--  147 (361)
T KOG1430|consen   81 HCAASPVPDFVEND-----R-DLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEP----IINGDESLPYPL--  147 (361)
T ss_pred             EeccccCccccccc-----h-hhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCee----cccCCCCCCCcc--
Confidence            88887665554444     4 3899999999999999999999 999999999998766544    123455554331  


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCC
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS  244 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (348)
                           .+.+.|+.||..+|.++++.....++..+.|||+.||||++....+..    ..+++.....+. .+..   +.+
T Consensus       148 -----~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i----~~~~~~g~~~f~-~g~~---~~~  214 (361)
T KOG1430|consen  148 -----KHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKI----VEALKNGGFLFK-IGDG---ENL  214 (361)
T ss_pred             -----ccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHH----HHHHHccCceEE-eecc---ccc
Confidence                 144689999999999999988767899999999999999988654433    333333333333 2222   256


Q ss_pred             cceeeHHHHHHHHHHhhc-----CCCCCc-eEEEec-cCcChHHHHHHHHHhCCCCCCC------ccc------------
Q 035965          245 IALVHIEDICNAHIFLME-----NDRAQG-QYICCV-KSCPISEFIDHLKLEYPSSKMQ------TFE------------  299 (348)
Q Consensus       245 r~~i~v~D~a~~~~~~~~-----~~~~~~-~y~~~~-~~~s~~el~~~i~~~~~~~~~~------~~~------------  299 (348)
                      -||+|++.++.+.+.+..     .+..+| .|++++ .+....++...+.+.+|- ..|      ...            
T Consensus       215 ~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~-~~~~~~~~p~~l~~~~~~l~e~~~  293 (361)
T KOG1430|consen  215 NDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGY-CLPSSIKLPLFLSYFLAYLLEIVY  293 (361)
T ss_pred             cceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCC-CCCceeecchHHHHHHHHHHHHHH
Confidence            779999999998887643     233344 577765 488888888899998874 333      100            


Q ss_pred             ---CCCCC----------CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcCC
Q 035965          300 ---GENQS----------SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCGF  342 (348)
Q Consensus       300 ---~~~~~----------~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~~  342 (348)
                         .+..+          .....++.+|++ +|||.|..+++|++.+++.|......
T Consensus       294 ~~l~p~~p~lt~~~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~~  350 (361)
T KOG1430|consen  294 FLLRPYQPILTRFRVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASESD  350 (361)
T ss_pred             HhccCCCCCcChhheeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhhh
Confidence               11122          457789999999 99999999999999999999876443

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4.5e-35  Score=242.30  Aligned_cols=307  Identities=16%  Similarity=0.173  Sum_probs=244.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccC----CCCCeEEEEccCCCcchHHHhhc--CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWT----RSDRLRLFQADLQVEGSFDKAVM--GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~--~~d   81 (348)
                      ++|+.||||-||+-|++|++.|+++||+|+++.|+.+..  ....+..    ...++.++.+|++|...+.++++  .+|
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd   80 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD   80 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence            468899999999999999999999999999999975433  1112211    23458899999999999999887  589


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCC-cceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES-VKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      -|+|+||..+...+.+.     |+ .+.+++..|+.+|||+.+..+. ..||...||+..|+.. .    ..|.+|.+|.
T Consensus        81 EIYNLaAQS~V~vSFe~-----P~-~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v-~----~~pq~E~TPF  149 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQ-----PE-YTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLV-Q----EIPQKETTPF  149 (345)
T ss_pred             hheeccccccccccccC-----cc-eeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCc-c----cCccccCCCC
Confidence            99999999988888888     86 8999999999999999999873 4688888887755444 3    3689999987


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC--CCchHHHHHhhhcCCCCcccccccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS--VPSSIQVLLSPITGDSKFFSILSSV  238 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  238 (348)
                      .         |+++|+.+|+-+--....|.+.+|+-.+.=.++|--+|.+...  ...+...+.++..|....+. .|+.
T Consensus       150 y---------PrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~-lGNl  219 (345)
T COG1089         150 Y---------PRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLY-LGNL  219 (345)
T ss_pred             C---------CCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEE-eccc
Confidence            6         9999999999999999999999999999988899888876543  22233445566667666555 6777


Q ss_pred             ccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCC--------------------CCCCcc
Q 035965          239 SNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPS--------------------SKMQTF  298 (348)
Q Consensus       239 ~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~--------------------~~~~~~  298 (348)
                      +   ..|||-|+.|-++++.+.++++.+....+.+++..|++|++++..+..|.                    ..+.+.
T Consensus       220 d---AkRDWG~A~DYVe~mwlmLQq~~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~id  296 (345)
T COG1089         220 D---AKRDWGHAKDYVEAMWLMLQQEEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEID  296 (345)
T ss_pred             c---ccccccchHHHHHHHHHHHccCCCCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEEC
Confidence            7   89999999999999999999987554556789999999999999998872                    001111


Q ss_pred             cCCCCC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          299 EGENQS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       299 ~~~~~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      ..-.+|  .....-|.+|++ .|||+|+++++|.+++++++..+.
T Consensus       297 p~~fRPaEV~~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~~  341 (345)
T COG1089         297 PRYFRPAEVDLLLGDPTKAKEKLGWRPEVSLEELVREMVEADLEA  341 (345)
T ss_pred             ccccCchhhhhhcCCHHHHHHHcCCccccCHHHHHHHHHHHHHHH
Confidence            111222  334557899999 899999999999999999987653

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=1.5e-35  Score=255.25  Aligned_cols=230  Identities=25%  Similarity=0.301  Sum_probs=184.0

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEEEccccC
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVFHVAASM   90 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih~a~~~   90 (348)
                      |||||||||||++|+++|+++|++|+.+.|+.... .....    .+++++.+|+.|.+.+.++++.  +|+|||+|+..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~   76 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS   76 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH----TTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc----ceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence            79999999999999999999999999999987655 22211    1789999999999999999875  59999999975


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA  170 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  170 (348)
                      ........     + ..+++.|+.++.++++++.+.+ ++++||+||..+|+.. .    ..+++|+.+..         
T Consensus        77 ~~~~~~~~-----~-~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~-~----~~~~~e~~~~~---------  135 (236)
T PF01370_consen   77 SNPESFED-----P-EEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDP-D----GEPIDEDSPIN---------  135 (236)
T ss_dssp             SHHHHHHS-----H-HHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSS-S----SSSBETTSGCC---------
T ss_pred             cccccccc-----c-cccccccccccccccccccccc-cccccccccccccccc-c----ccccccccccc---------
Confidence            42221122     3 4788999999999999999999 7899999998866555 3    35788888654         


Q ss_pred             CcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCC-CCCCCCchH-HHHHhhhcCCCCccccccccccCCCCccee
Q 035965          171 SGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPF-LTSSVPSSI-QVLLSPITGDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       171 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                      |.++|+.+|..+|.+++.+.++++++++++||+.+|||. ........+ .++.++.++++..+.  +   .+++.|+|+
T Consensus       136 ~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~i  210 (236)
T PF01370_consen  136 PLSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIP--G---DGSQVRDFI  210 (236)
T ss_dssp             HSSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEE--S---TSSCEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCccccc--C---CCCCccceE
Confidence            677899999999999999999889999999999999999 111122333 345556666653332  3   345899999


Q ss_pred             eHHHHHHHHHHhhcCCC-CCceEEEe
Q 035965          249 HIEDICNAHIFLMENDR-AQGQYICC  273 (348)
Q Consensus       249 ~v~D~a~~~~~~~~~~~-~~~~y~~~  273 (348)
                      |++|+|+++..+++++. .+++||++
T Consensus       211 ~v~D~a~~~~~~~~~~~~~~~~yNig  236 (236)
T PF01370_consen  211 HVDDLAEAIVAALENPKAAGGIYNIG  236 (236)
T ss_dssp             EHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred             EHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999999998 68889874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=1.8e-33  Score=252.51  Aligned_cols=268  Identities=16%  Similarity=0.169  Sum_probs=195.5

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccCc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASME   91 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~~   91 (348)
                      |+|+|||||||||++|+++|+++||+|++++|+..+.....    ..+++++.+|+.|++++.++++++|+|||+++...
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~----~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~   76 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK----EWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRP   76 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh----hcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCC
Confidence            48999999999999999999999999999999865431111    13689999999999999999999999999876421


Q ss_pred             cccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCC
Q 035965           92 FDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKAS  171 (348)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  171 (348)
                           .+     + ..+.+.|+.++.+++++|++.+ ++||||+||.++.   ..                        +
T Consensus        77 -----~~-----~-~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~---~~------------------------~  117 (317)
T CHL00194         77 -----SD-----L-YNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAE---QY------------------------P  117 (317)
T ss_pred             -----CC-----c-cchhhhhHHHHHHHHHHHHHcC-CCEEEEecccccc---cc------------------------C
Confidence                 11     2 2677889999999999999998 9999999995421   01                        1


Q ss_pred             cchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHH
Q 035965          172 GWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIE  251 (348)
Q Consensus       172 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~  251 (348)
                      ..+|..+|..+|.+++.    .+++++++||+.+|+.....       .....+.+.+..+.      ++.+.++|||++
T Consensus       118 ~~~~~~~K~~~e~~l~~----~~l~~tilRp~~~~~~~~~~-------~~~~~~~~~~~~~~------~~~~~~~~i~v~  180 (317)
T CHL00194        118 YIPLMKLKSDIEQKLKK----SGIPYTIFRLAGFFQGLISQ-------YAIPILEKQPIWIT------NESTPISYIDTQ  180 (317)
T ss_pred             CChHHHHHHHHHHHHHH----cCCCeEEEeecHHhhhhhhh-------hhhhhccCCceEec------CCCCccCccCHH
Confidence            13488999999988754    58999999999988642111       01112222222221      234678999999


Q ss_pred             HHHHHHHHhhcCCCC-CceEEEec-cCcChHHHHHHHHHhCCCC----CCCccc--------C---CCCC----------
Q 035965          252 DICNAHIFLMENDRA-QGQYICCV-KSCPISEFIDHLKLEYPSS----KMQTFE--------G---ENQS----------  304 (348)
Q Consensus       252 D~a~~~~~~~~~~~~-~~~y~~~~-~~~s~~el~~~i~~~~~~~----~~~~~~--------~---~~~~----------  304 (348)
                      |+|+++..+++++.. +++||+++ +.+|+.|+++.+.+.+|..    .+|...        .   ....          
T Consensus       181 Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (317)
T CHL00194        181 DAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEI  260 (317)
T ss_pred             HHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHH
Confidence            999999999987654 66898864 5999999999999998851    122100        0   0011          


Q ss_pred             ---CCccccChHHHH-HcCCccc--cChhHHHHHHHHHHHH
Q 035965          305 ---SVPSVISSEKLK-DLGFNYK--HGIEDIICQTIASCVD  339 (348)
Q Consensus       305 ---~~~~~~~~~~~~-~LG~~p~--~~~~e~l~~~~~~~~~  339 (348)
                         ......+.++++ .||+.|.  .++++++++.+.-.++
T Consensus       261 ~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  301 (317)
T CHL00194        261 LNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERILK  301 (317)
T ss_pred             HhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHHHH
Confidence               123345666777 8999984  3899988888876543

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=100.00  E-value=3.9e-33  Score=247.83  Aligned_cols=276  Identities=20%  Similarity=0.209  Sum_probs=188.5

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccCcc
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEF   92 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~   92 (348)
                      |||||||||||++++++|+++|++|++++|++.+. ....       ..  ..|+.. ..+...+.++|+|||+|+....
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~   70 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-------EG--YKPWAP-LAESEALEGADAVINLAGEPIA   70 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-------ee--eecccc-cchhhhcCCCCEEEECCCCCcc
Confidence            69999999999999999999999999999987643 1110       01  112222 3455667789999999996543


Q ss_pred             ccc-cccccccchhhhhhhhhHHHHHHHHHHHhhcCCc--ceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           93 DIN-VKDNIETYVQSTVINPAIQSTLNLLKACLKSESV--KRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        93 ~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      ... ...     ....+++.|+.++.+++++|++.+ .  ..||+.||.++|+ ...    ..+++|+.+..        
T Consensus        71 ~~~~~~~-----~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg-~~~----~~~~~E~~~~~--------  131 (292)
T TIGR01777        71 DKRWTEE-----RKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYG-TSE----DRVFTEEDSPA--------  131 (292)
T ss_pred             cccCCHH-----HHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeC-CCC----CCCcCcccCCC--------
Confidence            211 111     123678899999999999999987 4  3466666655444 332    24677876322        


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVH  249 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~  249 (348)
                       +.+.|+..+...|..+..+ ++.+++++++||+++|||.... .+..... .....+.        ..+.+++.|+|||
T Consensus       132 -~~~~~~~~~~~~e~~~~~~-~~~~~~~~ilR~~~v~G~~~~~-~~~~~~~-~~~~~~~--------~~g~~~~~~~~i~  199 (292)
T TIGR01777       132 -GDDFLAELCRDWEEAAQAA-EDLGTRVVLLRTGIVLGPKGGA-LAKMLPP-FRLGLGG--------PLGSGRQWFSWIH  199 (292)
T ss_pred             -CCChHHHHHHHHHHHhhhc-hhcCCceEEEeeeeEECCCcch-hHHHHHH-HhcCccc--------ccCCCCcccccEe
Confidence             3345666666677766654 3468999999999999996431 1111111 1111111        1224558899999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCC---CCccc-----CCCCC--CCccccChHHHHHc
Q 035965          250 IEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSK---MQTFE-----GENQS--SVPSVISSEKLKDL  318 (348)
Q Consensus       250 v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~---~~~~~-----~~~~~--~~~~~~~~~~~~~L  318 (348)
                      ++|+|+++..+++++...+.||++ ++++|+.|+++.+.+.++...   +|...     +....  ..+...++++++++
T Consensus       200 v~Dva~~i~~~l~~~~~~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (292)
T TIGR01777       200 IEDLVQLILFALENASISGPVNATAPEPVRNKEFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEA  279 (292)
T ss_pred             HHHHHHHHHHHhcCcccCCceEecCCCccCHHHHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhc
Confidence            999999999999987777889875 569999999999999998511   22211     01111  34667888999999


Q ss_pred             CCcccc-ChhHHH
Q 035965          319 GFNYKH-GIEDII  330 (348)
Q Consensus       319 G~~p~~-~~~e~l  330 (348)
                      ||+|++ +++|++
T Consensus       280 g~~~~~~~~~~~~  292 (292)
T TIGR01777       280 GFQFQYPDLDEAL  292 (292)
T ss_pred             CCeeeCcChhhcC
Confidence            999999 688864

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK05865 hypothetical protein; Provisional

Probab=100.00  E-value=1.2e-32  Score=268.22  Aligned_cols=250  Identities=18%  Similarity=0.123  Sum_probs=189.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccCc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASME   91 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~~   91 (348)
                      |+|+|||||||||++++++|+++|++|++++|+.... .      ..+++++.+|++|.+++.++++++|+|||+|+...
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~-~------~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~   73 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS-W------PSSADFIAADIRDATAVESAMTGADVVAHCAWVRG   73 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh-c------ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCccc
Confidence            4799999999999999999999999999999975321 1      12578999999999999999999999999997431


Q ss_pred             cccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCC
Q 035965           92 FDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKAS  171 (348)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  171 (348)
                                     ..+++|+.++.+++++|++.+ +++|||+||..                                
T Consensus        74 ---------------~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~--------------------------------  105 (854)
T PRK05865         74 ---------------RNDHINIDGTANVLKAMAETG-TGRIVFTSSGH--------------------------------  105 (854)
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH--------------------------------
Confidence                           245789999999999999988 88999999831                                


Q ss_pred             cchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHH
Q 035965          172 GWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIE  251 (348)
Q Consensus       172 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~  251 (348)
                             |..+|.++..    ++++++++||++||||+..    .+   +.... ..  .+...|   ++.+.++|||++
T Consensus       106 -------K~aaE~ll~~----~gl~~vILRp~~VYGP~~~----~~---i~~ll-~~--~v~~~G---~~~~~~dfIhVd  161 (854)
T PRK05865        106 -------QPRVEQMLAD----CGLEWVAVRCALIFGRNVD----NW---VQRLF-AL--PVLPAG---YADRVVQVVHSD  161 (854)
T ss_pred             -------HHHHHHHHHH----cCCCEEEEEeceEeCCChH----HH---HHHHh-cC--ceeccC---CCCceEeeeeHH
Confidence                   6677877643    5899999999999999632    11   11211 11  111122   233567999999


Q ss_pred             HHHHHHHHhhcCCC-CCceEEEe-ccCcChHHHHHHHHHhCCCCCC--CcccCCCC---C-CCccccChHHHH-HcCCcc
Q 035965          252 DICNAHIFLMENDR-AQGQYICC-VKSCPISEFIDHLKLEYPSSKM--QTFEGENQ---S-SVPSVISSEKLK-DLGFNY  322 (348)
Q Consensus       252 D~a~~~~~~~~~~~-~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~--~~~~~~~~---~-~~~~~~~~~~~~-~LG~~p  322 (348)
                      |+|+++..+++++. .++.||++ ++.+|+.|+++.+.+.....+.  +....+..   . .....+|++|++ +|||+|
T Consensus       162 DVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P  241 (854)
T PRK05865        162 DAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQP  241 (854)
T ss_pred             HHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCC
Confidence            99999999987543 46789875 5689999999999875421111  11111110   0 224568999999 899999


Q ss_pred             ccChhHHHHHHHHHHHHc
Q 035965          323 KHGIEDIICQTIASCVDC  340 (348)
Q Consensus       323 ~~~~~e~l~~~~~~~~~~  340 (348)
                      +++++++|+++++|++.+
T Consensus       242 ~~sLeeGL~dti~~~r~r  259 (854)
T PRK05865        242 AWNAEECLEDFTLAVRGR  259 (854)
T ss_pred             CCCHHHHHHHHHHHHHhh
Confidence            999999999999999864

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=4e-33  Score=262.02  Aligned_cols=264  Identities=19%  Similarity=0.197  Sum_probs=186.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC---CeEEEEEcCCCcc-ccccc-----------------cC-----CCCCeEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG---YIVHATVRDPGKL-QIFSK-----------------WT-----RSDRLRLF   63 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g---~~V~~~~r~~~~~-~~~~~-----------------~~-----~~~~~~~~   63 (348)
                      ++++|||||||||||++|++.|++.+   .+|+++.|..... ...++                 +.     ..++++++
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            57899999999999999999999864   3689999965422 11000                 00     01578999


Q ss_pred             EccCCC-------cchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           64 QADLQV-------EGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        64 ~~Dl~d-------~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      .+|+++       .+.+..+++++|+|||+||......         +...+..+|+.|+.+++++|++.+.+++|||+|
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~---------~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vS  160 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDE---------RYDVALGINTLGALNVLNFAKKCVKVKMLLHVS  160 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcC---------CHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence            999984       3446677889999999999876432         224789999999999999999874488999999


Q ss_pred             cceeeeecCCCCCCCCcccCCCCCC-----------cc---------------------hh---------hc--cCCCcc
Q 035965          137 SVSTITAKDSSGEWRPVVDESCQTP-----------IH---------------------HV---------WN--KKASGW  173 (348)
Q Consensus       137 S~~~~~~~~~~~~~~~~~~E~~~~~-----------~~---------------------~~---------~~--~~~~~~  173 (348)
                      |+++|+....      .+.|..+.+           .+                     ..         .+  ...+.+
T Consensus       161 T~~vyG~~~~------~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn  234 (491)
T PLN02996        161 TAYVCGEKSG------LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPN  234 (491)
T ss_pred             eeEEecCCCc------eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCC
Confidence            9997765332      222221110           00                     00         00  122456


Q ss_pred             hhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchH-------HHHHhhhcCCCCccccccccccCCCCcc
Q 035965          174 VYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSI-------QVLLSPITGDSKFFSILSSVSNRMGSIA  246 (348)
Q Consensus       174 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~r~  246 (348)
                      .|+.||.++|.++..++.  +++++++||++||||...+. +.|+       ..+.....|....+  .|   .+++.||
T Consensus       235 ~Y~~TK~~aE~lv~~~~~--~lpv~i~RP~~V~G~~~~p~-~gwi~~~~~~~~i~~~~~~g~~~~~--~g---dg~~~~D  306 (491)
T PLN02996        235 TYVFTKAMGEMLLGNFKE--NLPLVIIRPTMITSTYKEPF-PGWIEGLRTIDSVIVGYGKGKLTCF--LA---DPNSVLD  306 (491)
T ss_pred             chHhhHHHHHHHHHHhcC--CCCEEEECCCEeccCCcCCC-CCcccchhhHHHHHHHhccceEeEE--ec---CCCeecc
Confidence            799999999999988754  89999999999999987652 3332       11222233333222  23   3458999


Q ss_pred             eeeHHHHHHHHHHhhcCC----CCCceEEEe-c--cCcChHHHHHHHHHhCCCCCCC
Q 035965          247 LVHIEDICNAHIFLMEND----RAQGQYICC-V--KSCPISEFIDHLKLEYPSSKMQ  296 (348)
Q Consensus       247 ~i~v~D~a~~~~~~~~~~----~~~~~y~~~-~--~~~s~~el~~~i~~~~~~~~~~  296 (348)
                      +|||+|++++++.++.+.    ..+.+||++ +  .++|+.|+++.+.+..+..+..
T Consensus       307 ~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~  363 (491)
T PLN02996        307 VIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWI  363 (491)
T ss_pred             eecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCCc
Confidence            999999999999998753    124579885 4  5899999999999988765553

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=8.2e-33  Score=221.25  Aligned_cols=292  Identities=20%  Similarity=0.202  Sum_probs=217.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~   86 (348)
                      |+||||||++|.+|++|++-+.+.|.  +-.++.-+                  -.+|+++.++.+++++  .+.+|||+
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------kd~DLt~~a~t~~lF~~ekPthVIhl   62 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------KDADLTNLADTRALFESEKPTHVIHL   62 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------ccccccchHHHHHHHhccCCceeeeh
Confidence            57999999999999999999998875  21121111                  2389999988988886  58999999


Q ss_pred             cccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           87 AASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        87 a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      |++...- .....     +. .++..|+.---|++..|-++| +++++++.|+..|.....     .|++|+....-+  
T Consensus        63 AAmVGGlf~N~~y-----nl-dF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~-----yPIdEtmvh~gp--  128 (315)
T KOG1431|consen   63 AAMVGGLFHNNTY-----NL-DFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTS-----YPIDETMVHNGP--  128 (315)
T ss_pred             HhhhcchhhcCCC-----ch-HHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCC-----CCCCHHHhccCC--
Confidence            9986432 22233     43 889999999999999999999 999999988885554433     688887543211  


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC------CchHHHHHhhhcCCCCccccccccc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV------PSSIQVLLSPITGDSKFFSILSSVS  239 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  239 (348)
                        ..+..--|+.+|+++....+.|.+++|..++.+-|.++|||.++...      |.++..+..+..++...+..+|   
T Consensus       129 --phpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwG---  203 (315)
T KOG1431|consen  129 --PHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWG---  203 (315)
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEec---
Confidence              11122359999999998889999999999999999999999887642      2223333333344444455444   


Q ss_pred             cCCCCcceeeHHHHHHHHHHhhcCCCCCc-eEEEecc--CcChHHHHHHHHHhCCCCCCCcccCC-CCC-CCccccChHH
Q 035965          240 NRMGSIALVHIEDICNAHIFLMENDRAQG-QYICCVK--SCPISEFIDHLKLEYPSSKMQTFEGE-NQS-SVPSVISSEK  314 (348)
Q Consensus       240 ~~~~~r~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~--~~s~~el~~~i~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~  314 (348)
                      +|...|.|||++|+|+++++++.+=..-+ +.+.+++  .+|++|+++++.++++= .-...... .++ +.....|++|
T Consensus       204 sG~PlRqFiys~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F-~G~l~~DttK~DGq~kKtasnsK  282 (315)
T KOG1431|consen  204 SGSPLRQFIYSDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDF-TGKLVWDTTKSDGQFKKTASNSK  282 (315)
T ss_pred             CCChHHHHhhHhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCC-CceEEeeccCCCCCcccccchHH
Confidence            44589999999999999999998754433 3444555  89999999999999863 22222222 222 5677899999


Q ss_pred             HHHcCCccccC-hhHHHHHHHHHHHHc
Q 035965          315 LKDLGFNYKHG-IEDIICQTIASCVDC  340 (348)
Q Consensus       315 ~~~LG~~p~~~-~~e~l~~~~~~~~~~  340 (348)
                      ++.|+|.|+++ |+++|.++++||.++
T Consensus       283 L~sl~pd~~ft~l~~ai~~t~~Wy~~N  309 (315)
T KOG1431|consen  283 LRSLLPDFKFTPLEQAISETVQWYLDN  309 (315)
T ss_pred             HHHhCCCcccChHHHHHHHHHHHHHHh
Confidence            99999999995 999999999999864

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-32  Score=266.53  Aligned_cols=298  Identities=17%  Similarity=0.186  Sum_probs=209.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHH--HCCCeEEEEEcCCCccccccccC--CCCCeEEEEccCCCc------chHHHhhcCCC
Q 035965           12 KTFCVTGANGYIGSWLVKTLL--ERGYIVHATVRDPGKLQIFSKWT--RSDRLRLFQADLQVE------GSFDKAVMGCD   81 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~Dl~d~------~~~~~~~~~~d   81 (348)
                      |+|||||||||||++|+++|+  ..|++|++++|+...........  ..++++++.+|++|+      +.+..+ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            489999999999999999999  47999999999654322111110  114689999999985      344454 7899


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTP  161 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~  161 (348)
                      +|||+|+......         ......++|+.++.+++++|++.+ +++|||+||.++++....      +.+|+.+..
T Consensus        80 ~Vih~Aa~~~~~~---------~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~------~~~e~~~~~  143 (657)
T PRK07201         80 HVVHLAAIYDLTA---------DEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEG------VFREDDFDE  143 (657)
T ss_pred             EEEECceeecCCC---------CHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccC------ccccccchh
Confidence            9999999765433         224678899999999999999988 899999999987653322      445554321


Q ss_pred             cchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCC-----chH-HHHHhhhcCCCCccccc
Q 035965          162 IHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVP-----SSI-QVLLSPITGDSKFFSIL  235 (348)
Q Consensus       162 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~  235 (348)
                      .      ..+.+.|+.+|.++|.+++.   ..+++++++||++|||+...+...     ..+ ..+... ...+..++..
T Consensus       144 ~------~~~~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  213 (657)
T PRK07201        144 G------QGLPTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKL-AKLPSWLPMV  213 (657)
T ss_pred             h------cCCCCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHh-ccCCcccccc
Confidence            0      11346799999999999875   358999999999999987543211     111 122222 2222222222


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCCCC-CceEEEec-cCcChHHHHHHHHHhCCCCC-------CCccc-----C-
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMENDRA-QGQYICCV-KSCPISEFIDHLKLEYPSSK-------MQTFE-----G-  300 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~-~~~y~~~~-~~~s~~el~~~i~~~~~~~~-------~~~~~-----~-  300 (348)
                      +.   +.+.++++|++|+++++..+++.+.. ++.||+++ +++|+.|+++.+.+.+|...       +|...     . 
T Consensus       214 ~~---~~~~~~~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~  290 (657)
T PRK07201        214 GP---DGGRTNIVPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAA  290 (657)
T ss_pred             cC---CCCeeeeeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhh
Confidence            22   22567899999999999999886544 55898864 69999999999999987633       12110     0 


Q ss_pred             ---------------CCCC------CCccccChHHHH-Hc---CCccccChhHHHHHHHHHHHHc
Q 035965          301 ---------------ENQS------SVPSVISSEKLK-DL---GFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       301 ---------------~~~~------~~~~~~~~~~~~-~L---G~~p~~~~~e~l~~~~~~~~~~  340 (348)
                                     ...+      .....+|+++++ .|   |+.+. .+.+.+..+++||.++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~~  354 (657)
T PRK07201        291 LGPVRRLRNAVATQLGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWERH  354 (657)
T ss_pred             cchhhHHHHHHHHhcCCCHHHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHhc
Confidence                           0001      345578888988 67   66766 8889999999988664

>PLN02778 3,5-epimerase/4-reductase

Probab=100.00  E-value=9e-31  Score=232.25  Aligned_cols=270  Identities=15%  Similarity=0.125  Sum_probs=185.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a   87 (348)
                      +.|+||||||+||||++|+++|+++|++|+...                      .|+.|.+.+...++  ++|+|||+|
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~----------------------~~~~~~~~v~~~l~~~~~D~ViH~A   65 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS----------------------GRLENRASLEADIDAVKPTHVFNAA   65 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec----------------------CccCCHHHHHHHHHhcCCCEEEECC
Confidence            357899999999999999999999999987532                      23334444554444  689999999


Q ss_pred             ccCcccc---ccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCC-CCCCCCcccCCCCCCcc
Q 035965           88 ASMEFDI---NVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDS-SGEWRPVVDESCQTPIH  163 (348)
Q Consensus        88 ~~~~~~~---~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~-~~~~~~~~~E~~~~~~~  163 (348)
                      |......   +..+     +. .++++|+.++.+++++|++.+ ++ ++++||.++|+.... +.....+++|++...  
T Consensus        66 a~~~~~~~~~~~~~-----p~-~~~~~Nv~gt~~ll~aa~~~g-v~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~--  135 (298)
T PLN02778         66 GVTGRPNVDWCESH-----KV-ETIRANVVGTLTLADVCRERG-LV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPN--  135 (298)
T ss_pred             cccCCCCchhhhhC-----HH-HHHHHHHHHHHHHHHHHHHhC-CC-EEEEecceEeCCCCCCCcccCCCCCcCCCCC--
Confidence            9764321   2233     53 889999999999999999998 65 566777665543221 000012466665321  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCC
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMG  243 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (348)
                            .|.+.|+.+|+++|.++..++     +..++|++.++|++...  .  ..++..++.+......          
T Consensus       136 ------~~~s~Yg~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~~--~--~~fi~~~~~~~~~~~~----------  190 (298)
T PLN02778        136 ------FTGSFYSKTKAMVEELLKNYE-----NVCTLRVRMPISSDLSN--P--RNFITKITRYEKVVNI----------  190 (298)
T ss_pred             ------CCCCchHHHHHHHHHHHHHhh-----ccEEeeecccCCccccc--H--HHHHHHHHcCCCeeEc----------
Confidence                  245789999999999998875     36688988888865321  1  1124444444432111          


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCC----CCCcccC---CCCCCCccccChHHH
Q 035965          244 SIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSS----KMQTFEG---ENQSSVPSVISSEKL  315 (348)
Q Consensus       244 ~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~  315 (348)
                      .++|+|++|++++++.++++.. ++.||++ ++.+|+.|+++++++.++..    .+.+...   ...+..+..+|++|+
T Consensus       191 ~~s~~yv~D~v~al~~~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~  269 (298)
T PLN02778        191 PNSMTILDELLPISIEMAKRNL-TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKL  269 (298)
T ss_pred             CCCCEEHHHHHHHHHHHHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccHHHH
Confidence            1369999999999999997654 5799885 56999999999999999851    1111111   011133557999999


Q ss_pred             H-HcCCccccChhHHHHHHHHHHH
Q 035965          316 K-DLGFNYKHGIEDIICQTIASCV  338 (348)
Q Consensus       316 ~-~LG~~p~~~~~e~l~~~~~~~~  338 (348)
                      + .++-.+. ..+++++..++-.+
T Consensus       270 ~~~~~~~~~-~~~~~~~~~~~~~~  292 (298)
T PLN02778        270 KREFPELLP-IKESLIKYVFEPNK  292 (298)
T ss_pred             HHhcccccc-hHHHHHHHHHHHHH
Confidence            9 6776566 67788888777664

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=100.00  E-value=3.4e-31  Score=219.72  Aligned_cols=281  Identities=20%  Similarity=0.245  Sum_probs=195.9

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-CCCEEEEccccCcc
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-GCDGVFHVAASMEF   92 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~Vih~a~~~~~   92 (348)
                      |+|||||||||++|+..|.+.||+|++++|++++......    ..+.       ..+.+.+... ++|+|||+||..-.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~----~~v~-------~~~~~~~~~~~~~DavINLAG~~I~   69 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH----PNVT-------LWEGLADALTLGIDAVINLAGEPIA   69 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC----cccc-------ccchhhhcccCCCCEEEECCCCccc
Confidence            6899999999999999999999999999999876511110    0111       2233444444 79999999997544


Q ss_pred             cc-ccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCC
Q 035965           93 DI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKAS  171 (348)
Q Consensus        93 ~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  171 (348)
                      .. +...     ..+...+..+..|..|.++..+....+++...+|+-.||+...    ...++|+.+...+++....  
T Consensus        70 ~rrWt~~-----~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~----~~~~tE~~~~g~~Fla~lc--  138 (297)
T COG1090          70 ERRWTEK-----QKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSG----DRVVTEESPPGDDFLAQLC--  138 (297)
T ss_pred             cccCCHH-----HHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCC----ceeeecCCCCCCChHHHHH--
Confidence            43 3333     3357889999999999999986654455555555555888877    5799999765444332211  


Q ss_pred             cchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHH
Q 035965          172 GWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIE  251 (348)
Q Consensus       172 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~  251 (348)
                              ..=|..... ++..|.+++++|.|+|.|+.... .+.....         ..+..-|..++|.|..+|||++
T Consensus       139 --------~~WE~~a~~-a~~~gtRvvllRtGvVLs~~GGa-L~~m~~~---------fk~glGG~~GsGrQ~~SWIhie  199 (297)
T COG1090         139 --------QDWEEEALQ-AQQLGTRVVLLRTGVVLSPDGGA-LGKMLPL---------FKLGLGGKLGSGRQWFSWIHIE  199 (297)
T ss_pred             --------HHHHHHHhh-hhhcCceEEEEEEEEEecCCCcc-hhhhcch---------hhhccCCccCCCCceeeeeeHH
Confidence                    111333333 34468999999999999986442 1111111         1222246677888999999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCC---CCCCccc-----CCCCC--CCccccChHHHHHcCC
Q 035965          252 DICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPS---SKMQTFE-----GENQS--SVPSVISSEKLKDLGF  320 (348)
Q Consensus       252 D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~---~~~~~~~-----~~~~~--~~~~~~~~~~~~~LG~  320 (348)
                      |++++|.+++++....|.||++ +.+++..|+++.+++.+.+   .++|...     ++...  ......-.+|+...||
T Consensus       200 D~v~~I~fll~~~~lsGp~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF  279 (297)
T COG1090         200 DLVNAILFLLENEQLSGPFNLTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGF  279 (297)
T ss_pred             HHHHHHHHHHhCcCCCCcccccCCCcCcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCC
Confidence            9999999999999999999986 5699999999999999985   2223211     22111  2233344566778899


Q ss_pred             cccc-ChhHHHHHHHH
Q 035965          321 NYKH-GIEDIICQTIA  335 (348)
Q Consensus       321 ~p~~-~~~e~l~~~~~  335 (348)
                      +++| +++++|.+++.
T Consensus       280 ~F~y~dl~~AL~~il~  295 (297)
T COG1090         280 QFQYPDLEEALADILK  295 (297)
T ss_pred             eeecCCHHHHHHHHHh
Confidence            9999 99999988764

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.97  E-value=3.7e-31  Score=226.40  Aligned_cols=245  Identities=18%  Similarity=0.158  Sum_probs=178.4

Q ss_pred             EEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-cccccc---CCCCCeE----EEEccCCCcchHHHhhc--CCCE
Q 035965           14 FCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFSKW---TRSDRLR----LFQADLQVEGSFDKAVM--GCDG   82 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~---~~~~~~~----~~~~Dl~d~~~~~~~~~--~~d~   82 (348)
                      ||||||+|.||+.||++|++.+ .++++++|+..+. .+....   ...++++    ++.+|++|.+.+..+++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999988 5899999987655 322222   1123444    45899999999999998  8999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI  162 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~  162 (348)
                      |||+||.-+.+.++..     |. +.+.+|+.||.|++++|.+++ +++||++||.-++.                    
T Consensus        81 VfHaAA~KhVpl~E~~-----p~-eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKAv~--------------------  133 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDN-----PF-EAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKAVN--------------------  133 (293)
T ss_dssp             EEE------HHHHCCC-----HH-HHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGCSS--------------------
T ss_pred             EEEChhcCCCChHHhC-----HH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEccccccCC--------------------
Confidence            9999999888776666     76 899999999999999999999 99999999987532                    


Q ss_pred             chhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHH-hhhcCCCCcccccccc
Q 035965          163 HHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLL-SPITGDSKFFSILSSV  238 (348)
Q Consensus       163 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  238 (348)
                              |.+.||.||+.+|.++..++...   +.+++++|+|||.|-...     ++..+. +..+|++..+.     
T Consensus       134 --------PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GS-----Vip~F~~Qi~~g~PlTvT-----  195 (293)
T PF02719_consen  134 --------PTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGS-----VIPLFKKQIKNGGPLTVT-----  195 (293)
T ss_dssp             ----------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTS-----CHHHHHHHHHTTSSEEEC-----
T ss_pred             --------CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCc-----HHHHHHHHHHcCCcceeC-----
Confidence                    66889999999999999998765   689999999999997432     455455 45556555554     


Q ss_pred             ccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCC-----CCCCCcccCCCCC
Q 035965          239 SNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYP-----SSKMQTFEGENQS  304 (348)
Q Consensus       239 ~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~-----~~~~~~~~~~~~~  304 (348)
                       .++-.|-|+.++++++.++.+......+++|... ++++++.|+++.+.+..|     ...+++.+.+.++
T Consensus       196 -~p~mtRffmti~EAv~Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~~~~~~~~i~I~~~GlRp  266 (293)
T PF02719_consen  196 -DPDMTRFFMTIEEAVQLVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSGLEPGKKPDIPIKFTGLRP  266 (293)
T ss_dssp             -ETT-EEEEE-HHHHHHHHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT-EEEESSSS-EEE----T
T ss_pred             -CCCcEEEEecHHHHHHHHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcccccccCCCcceEEcCCCC
Confidence             3446789999999999999999888778889885 689999999999999987     3356666655554

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.97  E-value=6.3e-29  Score=227.81  Aligned_cols=302  Identities=17%  Similarity=0.214  Sum_probs=201.6

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc----cccc------ccC--CC-CCeEEEEccCCCc------c
Q 035965           13 TFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL----QIFS------KWT--RS-DRLRLFQADLQVE------G   71 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~----~~~~------~~~--~~-~~~~~~~~Dl~d~------~   71 (348)
                      +|||||||||||++|+++|+++|  ++|++++|+.+..    .+..      ...  .. ++++++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  6799999976522    1100      000  01 4789999999864      3


Q ss_pred             hHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCC
Q 035965           72 SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        72 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                      .+..+.+++|+|||+|+......         +...+.+.|+.++.+++++|.+.+ .++|+|+||.++++....     
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~~---------~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~-----  145 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWVY---------PYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDL-----  145 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccCC---------cHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCC-----
Confidence            56666778999999999765433         334678899999999999999887 778999999987654322     


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCC--chHHHHH-hhhcCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVP--SSIQVLL-SPITGD  228 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~--~~~~~~~-~~~~~~  228 (348)
                      .+..|++.....    ...+.+.|+.+|+++|.+++.+.+. +++++++||+.+||+.......  ..+..+. ......
T Consensus       146 ~~~~~~~~~~~~----~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~  220 (367)
T TIGR01746       146 STVTEDDAIVTP----PPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG  220 (367)
T ss_pred             CCcccccccccc----ccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC
Confidence            123333321110    1113457999999999999987664 8999999999999984433211  1221121 111111


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEec-cCcChHHHHHHHHHhCCCCCCCccc-----
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCV-KSCPISEFIDHLKLEYPSSKMQTFE-----  299 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~~-----  299 (348)
                        .++ ..  .  ...++|+|++|++++++.++.++..   ++.||+++ ++.++.|+++.+.+ .|. +++...     
T Consensus       221 --~~p-~~--~--~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~-~~~~~~~~~w~  291 (367)
T TIGR01746       221 --AYP-DS--P--ELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGY-NLKLVSFDEWL  291 (367)
T ss_pred             --CCC-CC--C--ccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCC-CCCcCCHHHHH
Confidence              122 11  1  1256799999999999999887654   56798764 69999999999998 553 211100     


Q ss_pred             ----------CCC--CC----------------CCccccChHHHH----HcCCccccChhHHHHHHHHHHHHcCCC
Q 035965          300 ----------GEN--QS----------------SVPSVISSEKLK----DLGFNYKHGIEDIICQTIASCVDCGFL  343 (348)
Q Consensus       300 ----------~~~--~~----------------~~~~~~~~~~~~----~LG~~p~~~~~e~l~~~~~~~~~~~~~  343 (348)
                                ...  .+                .....+++++.+    .++..+..--++.+++++++|.+.+++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (367)
T TIGR01746       292 QRLEDSDTAKRDPPRYPLLPLLHFLGAGFEEPEFDTRNLDSRSTAEALEGDGIREPSITAPLLHLYLQYLKEIGFL  367 (367)
T ss_pred             HHHHHhhhcCCCcccccchhhhhccCCCcccccccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence                      000  00                011234555443    356544433457899999999988764

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=9.3e-29  Score=226.93  Aligned_cols=229  Identities=18%  Similarity=0.110  Sum_probs=173.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccc-c---ccccCCCCCeEEEEccCCCcchHHHhhc----CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ-I---FSKWTRSDRLRLFQADLQVEGSFDKAVM----GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~-~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~   80 (348)
                      .++++|+|||||||||++++++|+++|++|++++|+..+.. .   .......++++++.+|++|++++..+++    ++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            45789999999999999999999999999999999765321 0   0001112478999999999999999887    59


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      |+|||+++......           ...+++|+.++.++++++++.+ +++||++||.+++    .              
T Consensus       138 D~Vi~~aa~~~~~~-----------~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~----~--------------  187 (390)
T PLN02657        138 DVVVSCLASRTGGV-----------KDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQ----K--------------  187 (390)
T ss_pred             cEEEECCccCCCCC-----------ccchhhHHHHHHHHHHHHHHcC-CCEEEEEeecccc----C--------------
Confidence            99999987532111           2456789999999999999998 8999999998642    1              


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccccccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSN  240 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (348)
                                |...|..+|..+|..+..  +..+++++++||+.+||+..        ..+.....+.+..+  .|.   
T Consensus       188 ----------p~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~--------~~~~~~~~g~~~~~--~Gd---  242 (390)
T PLN02657        188 ----------PLLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG--------GQVEIVKDGGPYVM--FGD---  242 (390)
T ss_pred             ----------cchHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH--------HHHHhhccCCceEE--ecC---
Confidence                      223588999999998876  34689999999999997521        11223334443222  232   


Q ss_pred             CCCCc-ceeeHHHHHHHHHHhhcCCC-CCceEEEec--cCcChHHHHHHHHHhCCC
Q 035965          241 RMGSI-ALVHIEDICNAHIFLMENDR-AQGQYICCV--KSCPISEFIDHLKLEYPS  292 (348)
Q Consensus       241 ~~~~r-~~i~v~D~a~~~~~~~~~~~-~~~~y~~~~--~~~s~~el~~~i~~~~~~  292 (348)
                      ++..| ++||++|+|++++.++.++. .+++|++++  +.+|+.|+++++.+.+|+
T Consensus       243 G~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~  298 (390)
T PLN02657        243 GKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGK  298 (390)
T ss_pred             CcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCC
Confidence            22445 47999999999999987654 356788864  489999999999999986

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.97  E-value=1.2e-28  Score=223.75  Aligned_cols=249  Identities=19%  Similarity=0.155  Sum_probs=203.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccC---CCCCeEEEEccCCCcchHHHhhcC--CCE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWT---RSDRLRLFQADLQVEGSFDKAVMG--CDG   82 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~--~d~   82 (348)
                      .+|+||||||+|-||+.||+++++.+- +++.++|+..+. .......   ...++.++.+|++|.+.+..++++  +|+
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~  328 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI  328 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence            579999999999999999999999874 788999987654 2222111   135788999999999999999997  999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI  162 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~  162 (348)
                      |||+||.-+.+.++..     |. +.+.+|+.||.|++++|.+.+ +++||.+||.-++.                    
T Consensus       329 VfHAAA~KHVPl~E~n-----P~-Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKAV~--------------------  381 (588)
T COG1086         329 VFHAAALKHVPLVEYN-----PE-EAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKAVN--------------------  381 (588)
T ss_pred             EEEhhhhccCcchhcC-----HH-HHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCcccC--------------------
Confidence            9999999888887777     76 999999999999999999999 99999999987643                    


Q ss_pred             chhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHh-hhcCCCCcccccccc
Q 035965          163 HHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLS-PITGDSKFFSILSSV  238 (348)
Q Consensus       163 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  238 (348)
                              |.|.||.+|+++|.++..+.+..   +..++.+|.|||.|....     .+..+.+ +..|++..+.     
T Consensus       382 --------PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS-----ViPlFk~QI~~GgplTvT-----  443 (588)
T COG1086         382 --------PTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS-----VIPLFKKQIAEGGPLTVT-----  443 (588)
T ss_pred             --------CchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCC-----CHHHHHHHHHcCCCcccc-----
Confidence                    67889999999999999987743   389999999999997543     4555554 4455555554     


Q ss_pred             ccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCC---CCCCCcccCCCCC
Q 035965          239 SNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYP---SSKMQTFEGENQS  304 (348)
Q Consensus       239 ~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~---~~~~~~~~~~~~~  304 (348)
                       -++-.|-|..+.|.++.++.+......+++|... |+++++.|+++.+.+..|   ...+++.+.+.++
T Consensus       444 -dp~mtRyfMTI~EAv~LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g~~~~~dI~I~~~GlRp  512 (588)
T COG1086         444 -DPDMTRFFMTIPEAVQLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAGQTPPGDIAIKIIGLRP  512 (588)
T ss_pred             -CCCceeEEEEHHHHHHHHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhCCCCCCCCCeEEEecCC
Confidence             3346789999999999999999988778889885 689999999999999886   2344554444333

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.96  E-value=1.1e-28  Score=213.73  Aligned_cols=221  Identities=19%  Similarity=0.215  Sum_probs=130.5

Q ss_pred             EeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc----ccccc---c--------CCCCCeEEEEccCCCc------ch
Q 035965           16 VTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL----QIFSK---W--------TRSDRLRLFQADLQVE------GS   72 (348)
Q Consensus        16 VtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~----~~~~~---~--------~~~~~~~~~~~Dl~d~------~~   72 (348)
                      |||||||||++|+++|++++.  +|+++.|..+..    ++...   .        ...++++++.||++++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  999999987532    22111   0        0157999999999985      35


Q ss_pred             HHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCC
Q 035965           73 FDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        73 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      +..+.+++|+|||+||..+...         +...+.++|+.||+++++.|.+.. .++|+|+||+. +.+...     .
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~---------~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~-v~~~~~-----~  144 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNA---------PYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAY-VAGSRP-----G  144 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS----------S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGG-GTTS-T-----T
T ss_pred             hhccccccceeeecchhhhhcc---------cchhhhhhHHHHHHHHHHHHHhcc-CcceEEecccc-ccCCCC-----C
Confidence            6667778999999999988776         545789999999999999999776 56999999944 333322     1


Q ss_pred             cccCCCC-CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC---CCchHHHHHhhhc-C
Q 035965          153 VVDESCQ-TPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS---VPSSIQVLLSPIT-G  227 (348)
Q Consensus       153 ~~~E~~~-~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~-~  227 (348)
                      ...|... .............+.|..||+++|.+++.++++.|++++++||+.|+|...++.   .......+...+. +
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~  224 (249)
T PF07993_consen  145 TIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALG  224 (249)
T ss_dssp             T--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-
T ss_pred             cccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcC
Confidence            2222110 000011112235678999999999999999988899999999999999544432   1212223332222 2


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHH
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAH  257 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~  257 (348)
                      .....  .+.   +....|+++|+.+|++|
T Consensus       225 ~~p~~--~~~---~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  225 AFPDL--PGD---PDARLDLVPVDYVARAI  249 (249)
T ss_dssp             EEES---SB------TT--EEEHHHHHHHH
T ss_pred             Ccccc--cCC---CCceEeEECHHHHHhhC
Confidence            21111  122   22458899999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.95  E-value=5.9e-27  Score=221.81  Aligned_cols=262  Identities=17%  Similarity=0.192  Sum_probs=178.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC---eEEEEEcCCCcc----ccc-ccc------------C------CCCCeEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY---IVHATVRDPGKL----QIF-SKW------------T------RSDRLRLF   63 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~---~V~~~~r~~~~~----~~~-~~~------------~------~~~~~~~~   63 (348)
                      +.++|||||||||||++|++.|++.+.   +|+++.|.....    ++. .+.            +      ...++.++
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            478999999999999999999998764   689999964321    111 000            0      13578999


Q ss_pred             EccCCCc------chHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           64 QADLQVE------GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        64 ~~Dl~d~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      .+|++++      +..+.+.+++|+|||+|+......         +....+++|+.++.+++++|++.+..++|||+||
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~---------~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vST  268 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDE---------RYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVST  268 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECcccccccc---------CHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccC
Confidence            9999997      345566678999999999876543         3357899999999999999998765789999999


Q ss_pred             ceeeeecCCCCCCCCcccCCCCCC--------------------cch------h----h--------------------c
Q 035965          138 VSTITAKDSSGEWRPVVDESCQTP--------------------IHH------V----W--------------------N  167 (348)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~E~~~~~--------------------~~~------~----~--------------------~  167 (348)
                      +++++....      .+.|..+..                    .+.      .    .                    -
T Consensus       269 ayVyG~~~G------~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~  342 (605)
T PLN02503        269 AYVNGQRQG------RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAK  342 (605)
T ss_pred             ceeecCCCC------eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhh
Confidence            997765432      333333210                    000      0    0                    0


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchH-------HHHHhhhcCCCCcccccccccc
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSI-------QVLLSPITGDSKFFSILSSVSN  240 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  240 (348)
                      .....|.|..+|.++|.+++.+.  .+++++++||+.|.+....+. +-|.       ..+....+|....+  .+   .
T Consensus       343 ~~~~pNtYt~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~-pGw~d~~~~~~p~~~~~g~G~lr~~--~~---~  414 (605)
T PLN02503        343 LYGWQDTYVFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPF-PGWMEGNRMMDPIVLYYGKGQLTGF--LA---D  414 (605)
T ss_pred             hCCCCChHHHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCc-cccccCccccchhhhheeccceeEE--Ee---C
Confidence            12335789999999999999765  379999999999944322221 1110       11111112222112  22   3


Q ss_pred             CCCCcceeeHHHHHHHHHHhhcC-C----CCCceEEEe-c--cCcChHHHHHHHHHhCCCCC
Q 035965          241 RMGSIALVHIEDICNAHIFLMEN-D----RAQGQYICC-V--KSCPISEFIDHLKLEYPSSK  294 (348)
Q Consensus       241 ~~~~r~~i~v~D~a~~~~~~~~~-~----~~~~~y~~~-~--~~~s~~el~~~i~~~~~~~~  294 (348)
                      ++..-|+|+|+.++++++.++.. .    ....+||++ +  +++++.|+.+.+.+.....+
T Consensus       415 ~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P  476 (605)
T PLN02503        415 PNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSP  476 (605)
T ss_pred             CCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCC
Confidence            34788999999999999988432 1    124589885 5  59999999999998775433

>PRK12320 hypothetical protein; Provisional

Probab=99.95  E-value=1.5e-26  Score=221.31  Aligned_cols=235  Identities=16%  Similarity=0.211  Sum_probs=167.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccCc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASME   91 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~~   91 (348)
                      ||||||||+||||++|+++|+++||+|++++|.+...       ..++++++.+|++|+. +.+++.++|+|||+|+...
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-------~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~   72 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-------LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDT   72 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-------ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCc
Confidence            4799999999999999999999999999999865421       1136889999999984 7778889999999998531


Q ss_pred             cccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCC
Q 035965           92 FDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKAS  171 (348)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  171 (348)
                      .              ....+|+.++.+++++|++.+ + ++||+||.+   +.+.                         
T Consensus        73 ~--------------~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~~---G~~~-------------------------  108 (699)
T PRK12320         73 S--------------APGGVGITGLAHVANAAARAG-A-RLLFVSQAA---GRPE-------------------------  108 (699)
T ss_pred             c--------------chhhHHHHHHHHHHHHHHHcC-C-eEEEEECCC---CCCc-------------------------
Confidence            1              112479999999999999998 5 799999852   1111                         


Q ss_pred             cchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHh-hhcCCCCccccccccccCCCCcceeeH
Q 035965          172 GWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLS-PITGDSKFFSILSSVSNRMGSIALVHI  250 (348)
Q Consensus       172 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~i~v  250 (348)
                        .|.    .+|.++..    ++++++++|++++|||+......+.+..+.. ...+               +...+||+
T Consensus       109 --~~~----~aE~ll~~----~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~---------------~pI~vIyV  163 (699)
T PRK12320        109 --LYR----QAETLVST----GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSA---------------RPIRVLHL  163 (699)
T ss_pred             --ccc----HHHHHHHh----cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcC---------------CceEEEEH
Confidence              122    35666543    4689999999999999655322222222221 1111               12237999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCCCCccccChHHHH-HcCCccccChhH
Q 035965          251 EDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLK-DLGFNYKHGIED  328 (348)
Q Consensus       251 ~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~LG~~p~~~~~e  328 (348)
                      +|++++++.+++.+. .++||++ ++.+|+.|+++++....+...+. ..   .+......+....+ .++|.|+.+++.
T Consensus       164 dDvv~alv~al~~~~-~GiyNIG~~~~~Si~el~~~i~~~~p~~~~~-~~---~~~~~~~pdi~~a~~~~~w~~~~~~~~  238 (699)
T PRK12320        164 DDLVRFLVLALNTDR-NGVVDLATPDTTNVVTAWRLLRSVDPHLRTR-RV---RSWEQLIPEVDIAAVQEDWNFEFGWQA  238 (699)
T ss_pred             HHHHHHHHHHHhCCC-CCEEEEeCCCeeEHHHHHHHHHHhCCCcccc-cc---ccHHHhCCCCchhhhhcCCCCcchHHH
Confidence            999999999998753 5699875 56999999999998874431111 11   11223455666767 789999987754

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.95  E-value=1.5e-26  Score=227.37  Aligned_cols=265  Identities=15%  Similarity=0.124  Sum_probs=183.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a   87 (348)
                      +.|+||||||+||||++|++.|.++|++|..                      ..+|++|.+.+...++  ++|+|||+|
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~----------------------~~~~l~d~~~v~~~i~~~~pd~Vih~A  436 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY----------------------GKGRLEDRSSLLADIRNVKPTHVFNAA  436 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe----------------------eccccccHHHHHHHHHhhCCCEEEECC
Confidence            4578999999999999999999999988731                      1245777777777765  689999999


Q ss_pred             ccCccc---cccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCC-CCCCCCcccCCCCCCcc
Q 035965           88 ASMEFD---INVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDS-SGEWRPVVDESCQTPIH  163 (348)
Q Consensus        88 ~~~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~-~~~~~~~~~E~~~~~~~  163 (348)
                      +.....   .+..+     +. .++++|+.++.+|+++|++.+ + ++|++||.++|++... +.....+++|++...  
T Consensus       437 a~~~~~~~~~~~~~-----~~-~~~~~N~~gt~~l~~a~~~~g-~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~--  506 (668)
T PLN02260        437 GVTGRPNVDWCESH-----KV-ETIRANVVGTLTLADVCRENG-L-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPN--  506 (668)
T ss_pred             cccCCCCCChHHhC-----HH-HHHHHHhHHHHHHHHHHHHcC-C-eEEEEcccceecCCcccccccCCCCCcCCCCC--
Confidence            976422   22233     43 889999999999999999998 6 5778888776643211 000023677775432  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCC
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMG  243 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (348)
                            ++.+.|+.||+++|.+++.+.     +..++|+.++||.+... ...++.   .+++... .+..         
T Consensus       507 ------~~~~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~~-~~nfv~---~~~~~~~-~~~v---------  561 (668)
T PLN02260        507 ------FTGSFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLSN-PRNFIT---KISRYNK-VVNI---------  561 (668)
T ss_pred             ------CCCChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCCC-ccHHHH---HHhccce-eecc---------
Confidence                  244789999999999998863     46778888888754221 112222   2222222 2221         


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCC-CCC-CCcccCCCC-----C-CCccccChHH
Q 035965          244 SIALVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYP-SSK-MQTFEGENQ-----S-SVPSVISSEK  314 (348)
Q Consensus       244 ~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~-~~~-~~~~~~~~~-----~-~~~~~~~~~~  314 (348)
                      ..+..+++|++.++..+++. ..+|+||+++ +.+|+.|+++.|.+.++ ... .|+...+..     + +.+ .+|++|
T Consensus       562 p~~~~~~~~~~~~~~~l~~~-~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~-~l~~~k  639 (668)
T PLN02260        562 PNSMTVLDELLPISIEMAKR-NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNN-EMDASK  639 (668)
T ss_pred             CCCceehhhHHHHHHHHHHh-CCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccc-cccHHH
Confidence            12367889999998888874 3368998865 58999999999999874 211 222111111     1 344 899999


Q ss_pred             HH-HcCCccccChhHHHHHHHH
Q 035965          315 LK-DLGFNYKHGIEDIICQTIA  335 (348)
Q Consensus       315 ~~-~LG~~p~~~~~e~l~~~~~  335 (348)
                      ++ .+|+ +. +|+|+|.+++.
T Consensus       640 ~~~~~~~-~~-~~~~~l~~~~~  659 (668)
T PLN02260        640 LKKEFPE-LL-SIKESLIKYVF  659 (668)
T ss_pred             HHHhCcc-cc-chHHHHHHHHh
Confidence            99 6888 76 99999998875

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.95  E-value=1.6e-26  Score=187.78  Aligned_cols=301  Identities=18%  Similarity=0.178  Sum_probs=223.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---ccccccC-----CCCCeEEEEccCCCcchHHHhhc--CCC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSKWT-----RSDRLRLFQADLQVEGSFDKAVM--GCD   81 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~--~~d   81 (348)
                      |..||||-||.=|++|++.|+.+||+|+++.|+.+.-   ++..++.     .......+.+|++|...+.+++.  .++
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt  108 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT  108 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence            4579999999999999999999999999999865532   3333322     23467889999999999998886  578


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCC--cceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES--VKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      -|+|+|+..+...+.+-     |+ .+.++...||..||++.+.++-  .-||-..||.. .|+...    +.|-.|.+|
T Consensus       109 EiYnLaAQSHVkvSFdl-----pe-YTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSE-lyGkv~----e~PQsE~TP  177 (376)
T KOG1372|consen  109 EVYNLAAQSHVKVSFDL-----PE-YTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSE-LYGKVQ----EIPQSETTP  177 (376)
T ss_pred             hhhhhhhhcceEEEeec-----cc-ceeeccchhhhhHHHHHHhcCcccceeEEecccHh-hccccc----CCCcccCCC
Confidence            99999999888876666     64 7788999999999999998762  23677777766 555555    368889887


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC-C-CchHHHHHhhhcCCCCccccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS-V-PSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                      ..         |+++|+.+|..+-.++.+|.+.+++-.+.=-+++--.|....+ . ..+..-+.++..|....+. .|+
T Consensus       178 Fy---------PRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~-LGN  247 (376)
T KOG1372|consen  178 FY---------PRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIE-LGN  247 (376)
T ss_pred             CC---------CCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEE-ecc
Confidence            65         8899999999999888888888876555444445455544432 1 1111223334344444444 566


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCC---CC----------------CCcc
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPS---SK----------------MQTF  298 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~---~~----------------~~~~  298 (348)
                      .+   ..|||-|..|-++++...+++..+....+.+++..|++|+++..-...|+   +.                +.+.
T Consensus       248 L~---a~RDWGhA~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~  324 (376)
T KOG1372|consen  248 LS---ALRDWGHAGDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVD  324 (376)
T ss_pred             hh---hhcccchhHHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEec
Confidence            66   89999999999999999999987777778899999999999998777663   00                0011


Q ss_pred             cCCCCC--CCccccChHHHH-HcCCccccChhHHHHHHHHH
Q 035965          299 EGENQS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIAS  336 (348)
Q Consensus       299 ~~~~~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~  336 (348)
                      ..-.+|  .....-|.+|++ .|||+|+++++|-+++++..
T Consensus       325 ~kYyRPtEVd~LqGdasKAk~~LgW~pkv~f~eLVkeMv~~  365 (376)
T KOG1372|consen  325 PKYYRPTEVDTLQGDASKAKKTLGWKPKVTFPELVKEMVAS  365 (376)
T ss_pred             ccccCcchhhhhcCChHHHHHhhCCCCccCHHHHHHHHHHh
Confidence            111122  345556889999 89999999999999998874

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.94  E-value=1.3e-25  Score=198.84  Aligned_cols=247  Identities=15%  Similarity=0.149  Sum_probs=168.4

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhh------cC-CCEEEE
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAV------MG-CDGVFH   85 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------~~-~d~Vih   85 (348)
                      +|+||||||++|++++++|+++|++|++++|++++..       ..+++.+.+|+.|++++..++      ++ +|.|+|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~   73 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL   73 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence            5999999999999999999999999999999876431       125677889999999999988      57 999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +++....              .     .....+++++|++.| ++|||++||..+..+  .                   
T Consensus        74 ~~~~~~~--------------~-----~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~--~-------------------  112 (285)
T TIGR03649        74 VAPPIPD--------------L-----APPMIKFIDFARSKG-VRRFVLLSASIIEKG--G-------------------  112 (285)
T ss_pred             eCCCCCC--------------h-----hHHHHHHHHHHHHcC-CCEEEEeeccccCCC--C-------------------
Confidence            9763210              0     233568999999999 999999998653211  0                   


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                           +      .+...|.+++.   ..+++++++||+++++......       ....+......+.  +   .+++.+
T Consensus       113 -----~------~~~~~~~~l~~---~~gi~~tilRp~~f~~~~~~~~-------~~~~~~~~~~~~~--~---~g~~~~  166 (285)
T TIGR03649       113 -----P------AMGQVHAHLDS---LGGVEYTVLRPTWFMENFSEEF-------HVEAIRKENKIYS--A---TGDGKI  166 (285)
T ss_pred             -----c------hHHHHHHHHHh---ccCCCEEEEeccHHhhhhcccc-------cccccccCCeEEe--c---CCCCcc
Confidence                 0      11223444332   1489999999999986542111       0011111111111  1   234678


Q ss_pred             ceeeHHHHHHHHHHhhcCCCC-CceEEEe-ccCcChHHHHHHHHHhCCCCCCCccc------------CCCCC-------
Q 035965          246 ALVHIEDICNAHIFLMENDRA-QGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFE------------GENQS-------  304 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~-~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~------------~~~~~-------  304 (348)
                      +|||++|+|+++..++..+.. ++.|+++ ++.+|+.|+++.+.+.+|+ +++...            .+.++       
T Consensus       167 ~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~-~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~  245 (285)
T TIGR03649       167 PFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGR-KITHVKLTEEELAQRLQSFGMPEDLARMLA  245 (285)
T ss_pred             CcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCC-ceEEEeCCHHHHHHHHHHcCCCHHHHHHHH
Confidence            899999999999999988654 5678665 5799999999999999987 333211            01111       


Q ss_pred             -------CCccccChHHHH-HcCCccccChhHHHHHHHH
Q 035965          305 -------SVPSVISSEKLK-DLGFNYKHGIEDIICQTIA  335 (348)
Q Consensus       305 -------~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~  335 (348)
                             .......+..++ .+|.+|+ +|++.+++..+
T Consensus       246 ~~~~~~~~g~~~~~~~~~~~~~G~~p~-~~~~~~~~~~~  283 (285)
T TIGR03649       246 SLDTAVKNGAEVRLNDVVKAVTGSKPR-GFRDFAESNKA  283 (285)
T ss_pred             HHHHHHhCCccccccchHHHHhCcCCc-cHHHHHHHhhh
Confidence                   001111233334 6899999 89998887654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.5e-25  Score=196.13  Aligned_cols=237  Identities=21%  Similarity=0.165  Sum_probs=167.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   82 (348)
                      .|++|||||+||||++++++|+++|++|++++|+.... .+...  ...++.++.+|++|.+++.++++       ++|+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR--YGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999999999999999999999999999976543 22211  12468899999999988877653       4799


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      |||+||..........+.+++  ...+++|+.++.++++++    ++.+ .++||++||.....+.              
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~--------------  142 (276)
T PRK06482         80 VVSNAGYGLFGAAEELSDAQI--RRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIAY--------------  142 (276)
T ss_pred             EEECCCCCCCcccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccCC--------------
Confidence            999999765443222222222  467889999999999997    4445 6799999996532111              


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCcc---ccCCCCCCC-----Cc-hHHHHHhhhc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTV---AGPFLTSSV-----PS-SIQVLLSPIT  226 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v---~G~~~~~~~-----~~-~~~~~~~~~~  226 (348)
                                 ++.+.|+.||.+.|.+++.++++   ++++++++||+.+   ||++.....     .. ....+.+.+.
T Consensus       143 -----------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (276)
T PRK06482        143 -----------PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALA  211 (276)
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHh
Confidence                       03357999999999999998876   5899999999988   665432210     00 0111112211


Q ss_pred             CCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCC
Q 035965          227 GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYP  291 (348)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~  291 (348)
                      ...              ..-+.+++|++++++.++..+.....|+++ ++..++.|+++.+.+.+.
T Consensus       212 ~~~--------------~~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        212 DGS--------------FAIPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             hcc--------------CCCCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence            111              111468999999999999877666678876 457788888877776653

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.94  E-value=1e-24  Score=231.07  Aligned_cols=259  Identities=20%  Similarity=0.222  Sum_probs=178.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC----CeEEEEEcCCCcc-ccccc-----------cCCCCCeEEEEccCCCc----
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG----YIVHATVRDPGKL-QIFSK-----------WTRSDRLRLFQADLQVE----   70 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g----~~V~~~~r~~~~~-~~~~~-----------~~~~~~~~~~~~Dl~d~----   70 (348)
                      .++|+|||||||||++|+++|++++    ++|+++.|..... ....+           .....+++++.+|+.++    
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5789999999999999999999887    7999999975432 11111           01123689999999754    


Q ss_pred             --chHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCC
Q 035965           71 --GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSG  148 (348)
Q Consensus        71 --~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~  148 (348)
                        +.+..+.+++|+|||+|+..+...         +...+...|+.|+.+++++|.+.+ +++|+|+||.++++......
T Consensus      1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~---------~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~ 1120 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNGALVHWVY---------PYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVN 1120 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECCcEecCcc---------CHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccc
Confidence              456666778999999999876443         444566789999999999999877 88999999998774321100


Q ss_pred             -------CCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHH
Q 035965          149 -------EWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVL  221 (348)
Q Consensus       149 -------~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~  221 (348)
                             .....+.|..+....    ...+.+.|+.||+++|.++..+.+ .|++++++||++|||+...+... ....+
T Consensus      1121 ~~~~~~~~~~~~~~e~~~~~~~----~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~-~~~~~ 1194 (1389)
T TIGR03443      1121 LSDELVQAGGAGIPESDDLMGS----SKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATN-TDDFL 1194 (1389)
T ss_pred             hhhhhhhccCCCCCcccccccc----cccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCC-chhHH
Confidence                   001123343322111    112345799999999999998776 48999999999999997654311 11122


Q ss_pred             HhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEec-cCcChHHHHHHHHHh
Q 035965          222 LSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCV-KSCPISEFIDHLKLE  289 (348)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~-~~~s~~el~~~i~~~  289 (348)
                      ...+.+... +   +......+.++|++++|++++++.++.++..   ..+||+++ ..+++.++++.+.+.
T Consensus      1195 ~~~~~~~~~-~---~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1195 LRMLKGCIQ-L---GLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred             HHHHHHHHH-h---CCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence            222222110 0   1111223568899999999999999876642   23687765 489999999999764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.93  E-value=4.2e-26  Score=198.40  Aligned_cols=256  Identities=18%  Similarity=0.212  Sum_probs=169.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc----cccccc--------CCCCCeEEEEccCCCc------ch
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL----QIFSKW--------TRSDRLRLFQADLQVE------GS   72 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~----~~~~~~--------~~~~~~~~~~~Dl~d~------~~   72 (348)
                      ++||+||||||+|++|+..|+.+-. +|+|++|..++.    ++.+..        ...++++.+.+|+..+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            4799999999999999999998755 999999976622    222111        2347899999999843      56


Q ss_pred             HHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCC
Q 035965           73 FDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        73 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      +.++.+.+|.|||+||..+...         |.+.....||.||..+++.|.... ++.+.|+||+++........ ...
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v~---------pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~-~~~  149 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHVF---------PYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSN-FTV  149 (382)
T ss_pred             HHHHhhhcceEEecchhhcccC---------cHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCC-Ccc
Confidence            7888889999999999988766         667889999999999999998776 77899999999654433211 001


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                      -.+|..+.    -..-..+.+.|+.||+++|.+++.+.+. |++++++|||.|-|...++... ...++.+...+-..  
T Consensus       150 ~~~~~~~~----~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n-~~D~~~Rlv~~~~~--  221 (382)
T COG3320         150 DFDEISPT----RNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALN-TRDFLTRLVLGLLQ--  221 (382)
T ss_pred             cccccccc----ccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccc-cchHHHHHHHHHHH--
Confidence            11111111    1112335678999999999999999887 9999999999999998754311 11112222221110  


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHH-----------hhcCCCC-CceEEE--eccCcChHHHHHHHHH
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIF-----------LMENDRA-QGQYIC--CVKSCPISEFIDHLKL  288 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~-----------~~~~~~~-~~~y~~--~~~~~s~~el~~~i~~  288 (348)
                        .|..+.....++.+.++.+++++..           ++.++.. -..|.+  -+..+.+.++.+.+.+
T Consensus       222 --lg~~P~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         222 --LGIAPDSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             --hCCCCCcccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence              1111111233444444444443333           3322211 234543  3668999999988877

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.92  E-value=4.4e-24  Score=177.10  Aligned_cols=279  Identities=16%  Similarity=0.147  Sum_probs=201.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      +-.+-|+|||||+|+++|.+|.+.|-+|++--|..+.. .-.+.-+...++-+...|+.|+++++++++..++|||+.|-
T Consensus        61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr  140 (391)
T KOG2865|consen   61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR  140 (391)
T ss_pred             ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence            33578999999999999999999999999999965543 33444455678999999999999999999999999999985


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      -....         .. .+.++|+.+...+.+.|++.| +.|||++|+..+   +-.                       
T Consensus       141 d~eTk---------nf-~f~Dvn~~~aerlAricke~G-VerfIhvS~Lga---nv~-----------------------  183 (391)
T KOG2865|consen  141 DYETK---------NF-SFEDVNVHIAERLARICKEAG-VERFIHVSCLGA---NVK-----------------------  183 (391)
T ss_pred             ccccC---------Cc-ccccccchHHHHHHHHHHhhC-hhheeehhhccc---ccc-----------------------
Confidence            43332         33 788899999999999999999 999999999762   111                       


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVH  249 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~  249 (348)
                       ..+-|=.+|.++|..+++..-    ..+|+||+.|||..+..     +......++. -..++..+.+  .+.....||
T Consensus       184 -s~Sr~LrsK~~gE~aVrdafP----eAtIirPa~iyG~eDrf-----ln~ya~~~rk-~~~~pL~~~G--ekT~K~PVy  250 (391)
T KOG2865|consen  184 -SPSRMLRSKAAGEEAVRDAFP----EATIIRPADIYGTEDRF-----LNYYASFWRK-FGFLPLIGKG--EKTVKQPVY  250 (391)
T ss_pred             -ChHHHHHhhhhhHHHHHhhCC----cceeechhhhcccchhH-----HHHHHHHHHh-cCceeeecCC--cceeeccEE
Confidence             234588999999999998643    58999999999987653     2222233322 2234433332  235667999


Q ss_pred             HHHHHHHHHHhhcCCCCCc-eE-EEeccCcChHHHHHHHHHhCCC------CCCCccc-------------CCCCC----
Q 035965          250 IEDICNAHIFLMENDRAQG-QY-ICCVKSCPISEFIDHLKLEYPS------SKMQTFE-------------GENQS----  304 (348)
Q Consensus       250 v~D~a~~~~~~~~~~~~~~-~y-~~~~~~~s~~el~~~i~~~~~~------~~~~~~~-------------~~~~~----  304 (348)
                      |-|||.+|+.++..+...| .| +++.+.+++.|+++.+-+....      .++|+..             ....+    
T Consensus       251 V~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d  330 (391)
T KOG2865|consen  251 VVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRD  330 (391)
T ss_pred             EehHHHHHHHhccCccccCceeeecCCchhhHHHHHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCCCHH
Confidence            9999999999999987755 68 5677899999999988765432      2333211             00000    


Q ss_pred             ------CCccccCh-HHHHHcCCccccChhHHHHHHHHHHHHc
Q 035965          305 ------SVPSVISS-EKLKDLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       305 ------~~~~~~~~-~~~~~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                            .....++. -.+++||.+++ .+|...-+.+.-|++-
T Consensus       331 ~ie~~~v~~~vlt~~~tleDLgv~~t-~le~~~~e~l~~yR~~  372 (391)
T KOG2865|consen  331 QIERLTVTDLVLTGAPTLEDLGVVLT-KLELYPVEFLRQYRKG  372 (391)
T ss_pred             HhhheeehhhhcCCCCcHhhcCceee-ecccccHHHHHHHhhc
Confidence                  11122222 23568999988 8887666666655543

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.92  E-value=4.6e-24  Score=186.56  Aligned_cols=234  Identities=17%  Similarity=0.122  Sum_probs=156.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      ++++++|||||+|+||+++++.|+++|++|++++|++.+. .... ......++.++.+|++|.+++.++++       +
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4568999999999999999999999999999999987543 2111 11122457889999999998877654       3


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHH----HHHHHHHH-hhcCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQS----TLNLLKAC-LKSESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~----~~~ll~~~-~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +|+|||+|+............++|  ...+++|+.+    +..+++.+ +..+ .++||++||.....+.+         
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~~---------  152 (262)
T PRK13394         85 VDILVSNAGIQIVNPIENYSFADW--KKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEASP---------  152 (262)
T ss_pred             CCEEEECCccCCCCchhhCCHHHH--HHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCCC---------
Confidence            899999999764433222222222  4678899999    66677776 5555 78999999975432111         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      +.+.|+.+|.+.+.+++.++++   .+++++++||+.++++......+.    ..... +....
T Consensus       153 ----------------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~----~~~~~-~~~~~  211 (262)
T PRK13394        153 ----------------LKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPE----QAKEL-GISEE  211 (262)
T ss_pred             ----------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHh----hhhcc-CCChH
Confidence                            3346999999999999988776   479999999999999864321110    00000 00000


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QG-QYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  275 (348)
                      -.....+..+...++|++++|+++++..++..+..  .| .|++.++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g  258 (262)
T PRK13394        212 EVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG  258 (262)
T ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence            00000001122457799999999999999986532  34 4555543

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6e-24  Score=187.16  Aligned_cols=240  Identities=19%  Similarity=0.139  Sum_probs=169.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      ++++||||||+|+||++++++|+++|++|++++|+..+. .....  ....+.++.+|++|.+++.++++       .+|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEK--YGDRLLPLALDVTDRAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--ccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999999999999999999999999999976543 22211  12367888999999988876654       579


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+||........+.+.++|  ...+++|+.++..+++.+    ++.+ .+++|++||...+.+.+            
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~------------  144 (275)
T PRK08263         80 IVVNNAGYGLFGMIEEVTESEA--RAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAFP------------  144 (275)
T ss_pred             EEEECCCCccccccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCCC------------
Confidence            9999999765543333333334  578999999998888876    3444 67999999976543221            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCc--hHHHHHhhhcCCCCcc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPS--SIQVLLSPITGDSKFF  232 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~  232 (348)
                                   ....|+.+|.+.+.+.+.++.+   +|++++++||+.+..+........  .........    ..+
T Consensus       145 -------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~----~~~  207 (275)
T PRK08263        145 -------------MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLR----EEL  207 (275)
T ss_pred             -------------CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHH----HHH
Confidence                         2246999999999999888765   689999999999887654211000  000000000    000


Q ss_pred             ccccccccCCCCcce-eeHHHHHHHHHHhhcCCCCCceEEEe-c-cCcChHHHHHHHHHh
Q 035965          233 SILSSVSNRMGSIAL-VHIEDICNAHIFLMENDRAQGQYICC-V-KSCPISEFIDHLKLE  289 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~-i~v~D~a~~~~~~~~~~~~~~~y~~~-~-~~~s~~el~~~i~~~  289 (348)
                         +.   ....+.+ ++++|++++++.+++.+...+.|+++ + +.+++.++.+.+.+.
T Consensus       208 ---~~---~~~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        208 ---AE---QWSERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             ---HH---HHHhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence               00   0012335 89999999999999988777666553 3 488899999888874

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.92  E-value=2e-23  Score=181.29  Aligned_cols=227  Identities=19%  Similarity=0.181  Sum_probs=156.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCC-cchHHHhh-cCCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQV-EGSFDKAV-MGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~-~~~d~Vih~   86 (348)
                      .+|+|+||||||+||++|+++|+++||+|+++.|++++. ....   ...+++++.+|++| .+++.+.+ .++|+|||+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~   92 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---QDPSLQIVRADVTEGSDKLVEAIGDDSDAVICA   92 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---cCCceEEEEeeCCCCHHHHHHHhhcCCCEEEEC
Confidence            478999999999999999999999999999999987643 2111   12368999999998 46677777 689999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      ++......         +. ..++.|..++.++++++++.+ .++||++||.++++....     .+..+....      
T Consensus        93 ~g~~~~~~---------~~-~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~-----~~~~~~~~~------  150 (251)
T PLN00141         93 TGFRRSFD---------PF-APWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMG-----QILNPAYIF------  150 (251)
T ss_pred             CCCCcCCC---------CC-CceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCcc-----cccCcchhH------
Confidence            88542211         21 345788999999999999888 889999999986542211     121111100      


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcc
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIA  246 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  246 (348)
                       . .+...|..+|..+|.+++.    .+++++++||++++++.....   .             .+. .+..    ....
T Consensus       151 -~-~~~~~~~~~k~~~e~~l~~----~gi~~~iirpg~~~~~~~~~~---~-------------~~~-~~~~----~~~~  203 (251)
T PLN00141        151 -L-NLFGLTLVAKLQAEKYIRK----SGINYTIVRPGGLTNDPPTGN---I-------------VME-PEDT----LYEG  203 (251)
T ss_pred             -H-HHHHHHHHHHHHHHHHHHh----cCCcEEEEECCCccCCCCCce---E-------------EEC-CCCc----cccC
Confidence             0 0122345678888887654    589999999999998643211   0             000 0000    0112


Q ss_pred             eeeHHHHHHHHHHhhcCCCC-CceEEE-e--cc-CcChHHHHHHHHH
Q 035965          247 LVHIEDICNAHIFLMENDRA-QGQYIC-C--VK-SCPISEFIDHLKL  288 (348)
Q Consensus       247 ~i~v~D~a~~~~~~~~~~~~-~~~y~~-~--~~-~~s~~el~~~i~~  288 (348)
                      +|+.+|+|+++..++..+.. ..++.+ +  +. ..++.+++..+++
T Consensus       204 ~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        204 SISRDQVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             cccHHHHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence            79999999999999988765 445533 3  22 5789999888764

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-23  Score=184.61  Aligned_cols=229  Identities=17%  Similarity=0.078  Sum_probs=157.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      ++++|+||||+|+||++++++|+++|++|++++|++.+. .+...  ...++.++.+|++|.+++.++++       .+|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL--HPDRALARLLDVTDFDAIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh--cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            467899999999999999999999999999999987544 22211  12357889999999998877665       479


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+|+............++|  ...+++|+.++.++++++.    +.+ .+++|++||...+.+.+            
T Consensus        81 ~vv~~ag~~~~~~~~~~~~~~~--~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~~------------  145 (277)
T PRK06180         81 VLVNNAGYGHEGAIEESPLAEM--RRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITMP------------  145 (277)
T ss_pred             EEEECCCccCCcccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCCC------------
Confidence            9999999765433333322333  4679999999999999854    334 56899999976543211            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCC---chHHHHHhhhcCCCCc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVP---SSIQVLLSPITGDSKF  231 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~  231 (348)
                                   +...|+.+|.+.|.+++.++.+   .+++++++||+.+.++.......   ................
T Consensus       146 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (277)
T PRK06180        146 -------------GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQA  212 (277)
T ss_pred             -------------CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHH
Confidence                         3357999999999999988765   48999999999998875332111   0000000000000000


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~  275 (348)
                      .. .   .   ..+.+..++|+|++++.+++.+.....|..+.+
T Consensus       213 ~~-~---~---~~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~  249 (277)
T PRK06180        213 RE-A---K---SGKQPGDPAKAAQAILAAVESDEPPLHLLLGSD  249 (277)
T ss_pred             HH-h---h---ccCCCCCHHHHHHHHHHHHcCCCCCeeEeccHH
Confidence            00 0   0   112266899999999999998766666655544

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.92  E-value=2.6e-23  Score=180.57  Aligned_cols=224  Identities=21%  Similarity=0.107  Sum_probs=157.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc-ccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+..+. .. ..+.....++.++.+|+.|.+++.++++       .
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4568999999999999999999999999999999986533 11 1112222458899999999998888765       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+++..........+.+++  ...++.|+.++.++++++.    +.+ .++||++||...+. ...         
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~-~~~---------  150 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQW--ERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPR-VGY---------  150 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhc-cCC---------
Confidence            899999998765422212222222  4679999999999999874    334 67899999976430 111         


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                    .+...|+.+|.+++.+++.++.+   .+++++++||+.++|+..........   .......   .
T Consensus       151 --------------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~---~~~~~~~---~  210 (251)
T PRK12826        151 --------------PGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQW---AEAIAAA---I  210 (251)
T ss_pred             --------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHH---HHHHHhc---C
Confidence                          03346999999999999998765   48999999999999996543222110   0111110   1


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  275 (348)
                      +          ...+++++|+|.++..++..+..   ++.|++.++
T Consensus       211 ~----------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  246 (251)
T PRK12826        211 P----------LGRLGEPEDIAAAVLFLASDEARYITGQTLPVDGG  246 (251)
T ss_pred             C----------CCCCcCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            1          11288999999999998876532   445676554

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.91  E-value=1.2e-23  Score=183.22  Aligned_cols=230  Identities=17%  Similarity=0.110  Sum_probs=156.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccccc-CCCCCeEEEEccCCCcchHHHhh-------cCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKW-TRSDRLRLFQADLQVEGSFDKAV-------MGCD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~-------~~~d   81 (348)
                      ++++|||||+|+||++++++|+++|++|++++|+.... .+.... ....++.++.+|+.|.+++..++       .++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            46899999999999999999999999999999986543 222111 11246888999999998665544       3589


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+|+............+++  +..++.|+.++..+++.+    ++.+ .+++|++||...+.+.+            
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~--~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~------------  145 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDW--DRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVASP------------  145 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCCC------------
Confidence            9999999765433222222222  467889999988888877    4445 67999999976443221            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc-
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS-  233 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-  233 (348)
                                   ....|+.+|.+.+.+++.++.+   .+++++++||+.++++.....       +............ 
T Consensus       146 -------------~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~-------~~~~~~~~~~~~~~  205 (255)
T TIGR01963       146 -------------FKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQ-------IADQAKTRGIPEEQ  205 (255)
T ss_pred             -------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHH-------HHhhhcccCCCchH
Confidence                         1236999999999999888765   489999999999999853211       1111111110000 


Q ss_pred             -cccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 035965          234 -ILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCVK  275 (348)
Q Consensus       234 -~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  275 (348)
                       .......+.+.++++|++|+|++++.+++.+..   ++.|+++++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g  251 (255)
T TIGR01963       206 VIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGG  251 (255)
T ss_pred             HHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCc
Confidence             001111233567899999999999999986422   345777643

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.8e-23  Score=181.28  Aligned_cols=226  Identities=15%  Similarity=0.072  Sum_probs=154.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+.+++++||||+|+||+++++.|+++|++|++++|+.... .... ......++.++.+|++|.+++.++++       
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35568999999999999999999999999999999875433 1111 11112357888999999998877664       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      .+|+|||+|+............+++  ...+++|+.++.++++.+..    .+ .++||++||...+.+.+         
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~~---------  154 (274)
T PRK07775         87 EIEVLVSGAGDTYFGKLHEISTEQF--ESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQRP---------  154 (274)
T ss_pred             CCCEEEECCCcCCCcccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCC---------
Confidence            5799999999754332222222222  36689999999999988753    33 56899999976443211         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSK  230 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~  230 (348)
                                      +...|+.+|.+.|.+++.++++.   +++++++|||.+.++......+.... .+.....    
T Consensus       155 ----------------~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~----  214 (274)
T PRK07775        155 ----------------HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK----  214 (274)
T ss_pred             ----------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH----
Confidence                            23469999999999999988764   89999999998765522111111111 1111100    


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC  273 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~  273 (348)
                          .+    ....+.++|++|+|++++.+++++..+..||+.
T Consensus       215 ----~~----~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        215 ----WG----QARHDYFLRASDLARAITFVAETPRGAHVVNME  249 (274)
T ss_pred             ----hc----ccccccccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence                00    012345999999999999999987544567764

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=4.6e-23  Score=178.64  Aligned_cols=222  Identities=18%  Similarity=0.112  Sum_probs=156.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccc-cCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+||||||||+||++|+++|+++|++|+++.|+..+.  ..... .....++.++.+|+.|.+++.++++       
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            4567999999999999999999999999998878765432  11111 1123468899999999998877664       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|+|||+|+............++|  ...+++|+.++.++++.+.    +.+ .+++|++||...+++..         
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~~---------  151 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEW--DEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGWP---------  151 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCCC---------
Confidence            5799999999654433212222222  4778999999999999874    445 78999999987653221         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      ....|+.+|...+.+++.++++   .+++++++||+.++|+..........  . .   . ...
T Consensus       152 ----------------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~--~-~---~-~~~  208 (249)
T PRK12825        152 ----------------GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAR--E-A---K-DAE  208 (249)
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhH--H-h---h-hcc
Confidence                            2346999999999999888765   58999999999999987543211110  0 0   0 001


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  275 (348)
                      .+          ...+++++|+++++.+++.+...   +..|+++++
T Consensus       209 ~~----------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g  245 (249)
T PRK12825        209 TP----------LGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGG  245 (249)
T ss_pred             CC----------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCC
Confidence            11          12288999999999999976532   445666543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=2.1e-23  Score=181.91  Aligned_cols=233  Identities=16%  Similarity=0.116  Sum_probs=155.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++++|+||||+|+||++++++|+++|++|++++|++.+. ... .......++.++.+|+.|.+++.++++       +
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3457999999999999999999999999999999987644 221 111123468899999999998877665       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHH----HhhcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA----CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+|+........+...+++  +..+++|+.++.++++.    +++.+ .++||++||...+++..          
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~----------  148 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKW--KKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGSA----------  148 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHH--HHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCC----------
Confidence            899999999755433223322222  46788899985555554    44455 78999999986554321          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +.+.|+.+|.+.+.+.+.++.+   .+++++++||+.+++|........    .... .+.. ..
T Consensus       149 ---------------~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~----~~~~-~~~~-~~  207 (258)
T PRK12429        149 ---------------GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPD----LAKE-RGIS-EE  207 (258)
T ss_pred             ---------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhh----hccc-cCCC-hH
Confidence                           2346999999999988888765   479999999999999864321110    0000 0000 00


Q ss_pred             cc-ccccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 035965          233 SI-LSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QG-QYICCVK  275 (348)
Q Consensus       233 ~~-~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  275 (348)
                      .. ...+......+.|++++|+|+++.+++.....  .+ .|++.++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        208 EVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             HHHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence            00 00000111345699999999999999876432  34 4666543

>PRK09135 pteridine reductase; Provisional

Probab=99.91  E-value=5.9e-23  Score=178.14  Aligned_cols=224  Identities=17%  Similarity=0.118  Sum_probs=150.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccC-CCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWT-RSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      ++.++||||||+||||++++++|+++|++|++++|+..+.  .... +.. ....+.++.+|++|.+++..+++      
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3457899999999999999999999999999999864322  1111 111 11357889999999998887765      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                       ++|+|||+|+............+++  +.++++|+.++.++++++...  .....++++|+....  .        +  
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~--------~--  149 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGSITEAQW--DDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE--R--------P--  149 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHH--HHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc--C--------C--
Confidence             4799999999754332222222222  478999999999999998642  112456665553210  0        1  


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                          .         .+.+.|+.+|.++|.+++.++++.  +++++.+||+.++||......+...  ......+.+    
T Consensus       150 ----~---------~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~--~~~~~~~~~----  210 (249)
T PRK09135        150 ----L---------KGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEA--RQAILARTP----  210 (249)
T ss_pred             ----C---------CCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHH--HHHHHhcCC----
Confidence                0         145689999999999999998774  5999999999999998643222211  111111111    


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCC-C-CCceEEEecc
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMEND-R-AQGQYICCVK  275 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~-~-~~~~y~~~~~  275 (348)
                       ...         +.+++|+|+++..++... . .+..|+++++
T Consensus       211 -~~~---------~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g  244 (249)
T PRK09135        211 -LKR---------IGTPEDIAEAVRFLLADASFITGQILAVDGG  244 (249)
T ss_pred             -cCC---------CcCHHHHHHHHHHHcCccccccCcEEEECCC
Confidence             111         336899999997666543 2 2456877544

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.91  E-value=3.2e-23  Score=171.30  Aligned_cols=183  Identities=30%  Similarity=0.312  Sum_probs=139.0

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccCccc
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFD   93 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~   93 (348)
                      |+|+||||++|++++++|+++|++|+++.|++.+...      ..+++++.+|+.|++++.++++++|+|||+++.... 
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~-   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK-   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT-
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc-
Confidence            7999999999999999999999999999999876522      358999999999999999999999999999964311 


Q ss_pred             cccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcc
Q 035965           94 INVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGW  173 (348)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  173 (348)
                                        +...+.++++++++.+ ++++|++||.+++.....     ....+...           ...
T Consensus        74 ------------------~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~-----~~~~~~~~-----------~~~  118 (183)
T PF13460_consen   74 ------------------DVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPG-----LFSDEDKP-----------IFP  118 (183)
T ss_dssp             ------------------HHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTS-----EEEGGTCG-----------GGH
T ss_pred             ------------------cccccccccccccccc-cccceeeeccccCCCCCc-----cccccccc-----------chh
Confidence                              1566889999999998 999999999985442222     11111110           124


Q ss_pred             hhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHHHH
Q 035965          174 VYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDI  253 (348)
Q Consensus       174 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~  253 (348)
                      .|...|..+|..++    +.+++++++||+.+||+.....  .+       ...            .+....++|+.+|+
T Consensus       119 ~~~~~~~~~e~~~~----~~~~~~~ivrp~~~~~~~~~~~--~~-------~~~------------~~~~~~~~i~~~Dv  173 (183)
T PF13460_consen  119 EYARDKREAEEALR----ESGLNWTIVRPGWIYGNPSRSY--RL-------IKE------------GGPQGVNFISREDV  173 (183)
T ss_dssp             HHHHHHHHHHHHHH----HSTSEEEEEEESEEEBTTSSSE--EE-------ESS------------TSTTSHCEEEHHHH
T ss_pred             hhHHHHHHHHHHHH----hcCCCEEEEECcEeEeCCCcce--eE-------Eec------------cCCCCcCcCCHHHH
Confidence            58888988888774    3589999999999999974321  00       000            11133459999999


Q ss_pred             HHHHHHhhcC
Q 035965          254 CNAHIFLMEN  263 (348)
Q Consensus       254 a~~~~~~~~~  263 (348)
                      |++++.++++
T Consensus       174 A~~~~~~l~~  183 (183)
T PF13460_consen  174 AKAIVEALEN  183 (183)
T ss_dssp             HHHHHHHHH-
T ss_pred             HHHHHHHhCC
Confidence            9999998764

...

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.91  E-value=7.5e-23  Score=165.32  Aligned_cols=297  Identities=15%  Similarity=0.144  Sum_probs=217.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHC-CC-eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLER-GY-IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFH   85 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih   85 (348)
                      +..+||||||-|.+|..++..|..+ |. .|+..+...+.....      +.-.++..|+.|...+++.+-  .+|.+||
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~------~~GPyIy~DILD~K~L~eIVVn~RIdWL~H  116 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT------DVGPYIYLDILDQKSLEEIVVNKRIDWLVH  116 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc------ccCCchhhhhhccccHHHhhcccccceeee
Confidence            4578999999999999999988766 54 566666433322111      234578899999988988753  6999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      ..+..+...  +.     .......+|+.|..|+++.|++++  -++...||++++++...    ..|..+-+       
T Consensus       117 fSALLSAvG--E~-----NVpLA~~VNI~GvHNil~vAa~~k--L~iFVPSTIGAFGPtSP----RNPTPdlt-------  176 (366)
T KOG2774|consen  117 FSALLSAVG--ET-----NVPLALQVNIRGVHNILQVAAKHK--LKVFVPSTIGAFGPTSP----RNPTPDLT-------  176 (366)
T ss_pred             HHHHHHHhc--cc-----CCceeeeecchhhhHHHHHHHHcC--eeEeecccccccCCCCC----CCCCCCee-------
Confidence            998755444  22     224678999999999999999998  56778899988776544    22333322       


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC--CCchHHHHHhhhc-CCCCccccccccccCC
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS--VPSSIQVLLSPIT-GDSKFFSILSSVSNRM  242 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  242 (348)
                        .++|+++||.||..+|.+-+.+..++|+.+-.+|.+.+......++  ..+....+..++. |+.....      .++
T Consensus       177 --IQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCyl------rpd  248 (366)
T KOG2774|consen  177 --IQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYL------RPD  248 (366)
T ss_pred             --eecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCccccc------CCC
Confidence              3458899999999999999999999999999999888876532222  3344444554444 4333222      344


Q ss_pred             CCcceeeHHHHHHHHHHhhcCCCC---CceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCC---CCCCccccChHHHH
Q 035965          243 GSIALVHIEDICNAHIFLMENDRA---QGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGEN---QSSVPSVISSEKLK  316 (348)
Q Consensus       243 ~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  316 (348)
                      ......|.+|+.++++.++..+..   ...||+++-++|-.|++..+.+.++...+.......   .+.+...+|.+.++
T Consensus       249 trlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar  328 (366)
T KOG2774|consen  249 TRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTGFSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEAR  328 (366)
T ss_pred             ccCceeehHHHHHHHHHHHhCCHHHhhhheeeeceeccCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHh
Confidence            566699999999999988887643   457999999999999999999999876554432222   12677788888888


Q ss_pred             -HcCCccccChhHHHHHHHHHHHHc
Q 035965          317 -DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       317 -~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                       +..|+-.+.+...+.-++...+.+
T Consensus       329 ~~wh~~h~~~l~~~i~~~i~~~~~n  353 (366)
T KOG2774|consen  329 TEWHEKHSLHLLSIISTVVAVHKSN  353 (366)
T ss_pred             hHHHHhhhhhHHHHHHHHHHHHHhh
Confidence             899999988888777777766543

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.1e-22  Score=177.02  Aligned_cols=241  Identities=15%  Similarity=0.080  Sum_probs=160.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.++. ... .+.....++.++.+|++|.+++.++++       .
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5578999999999999999999999999999999876543 221 111122357889999999998877664       4


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+||........+.+.++|  ...+++|+.++.++++++.    +.+..+++|++||...+.+.+          
T Consensus        84 id~li~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~----------  151 (275)
T PRK05876         84 VDVVFSNAGIVVGGPIVEMTHDDW--RWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNA----------  151 (275)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCC----------
Confidence            799999999754433333333334  4778999999999999875    333246899999976543211          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.+|.+.+.+.+.++.+   .++++++++|+.+.++..... ..    ......+.....
T Consensus       152 ---------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~----~~~~~~~~~~~~  211 (275)
T PRK05876        152 ---------------GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANS-ER----IRGAACAQSSTT  211 (275)
T ss_pred             ---------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccch-hh----hcCccccccccc
Confidence                           3357999999866666666544   489999999999988753321 00    000000111011


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHH
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKL  288 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~  288 (348)
                      ...+..   .+.+++++++|+|++++.++.++   ..|.+. ......++.+.+.+
T Consensus       212 ~~~~~~---~~~~~~~~~~dva~~~~~ai~~~---~~~~~~-~~~~~~~~~~~~~~  260 (275)
T PRK05876        212 GSPGPL---PLQDDNLGVDDIAQLTADAILAN---RLYVLP-HAASRASIRRRFER  260 (275)
T ss_pred             cccccc---cccccCCCHHHHHHHHHHHHHcC---CeEEec-ChhhHHHHHHHHHH
Confidence            111221   14567999999999999999865   345443 33344444444443

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.6e-22  Score=176.39  Aligned_cols=234  Identities=20%  Similarity=0.136  Sum_probs=162.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   82 (348)
                      +++++||||+|+||++++++|+++|++|++++|++.+. .+.... ...++.++.+|+.|.+++..+++       ++|+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL-GDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999986544 222111 12368889999999998877664       4899


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      |||+++..........+.++|  ...+..|+.++.++++++..    .+ .+++|++||......  .            
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~--~------------  143 (257)
T PRK07074         81 LVANAGAARAASLHDTTPASW--RADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAA--L------------  143 (257)
T ss_pred             EEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCC--C------------
Confidence            999998754332212212222  35577999999999888843    34 578999999653211  1            


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                                  ....|+.+|.+.+.+++.++++.   +++++.+||+.++++.......... .+.....         
T Consensus       144 ------------~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~~---------  201 (257)
T PRK07074        144 ------------GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANP-QVFEELK---------  201 (257)
T ss_pred             ------------CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccCh-HHHHHHH---------
Confidence                        01249999999999999998764   6999999999998875332110000 0111000         


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEe-ccCcChHHHHHHHHH
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICC-VKSCPISEFIDHLKL  288 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~-~~~~s~~el~~~i~~  288 (348)
                          .....++|++++|+++++.+++....  ..|. +++. +...+..|+++.+.+
T Consensus       202 ----~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        202 ----KWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             ----hcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence                01123569999999999999997532  2344 4554 458889999988765

>PRK06194 hypothetical protein; Provisional

Probab=99.90  E-value=4e-23  Score=183.11  Aligned_cols=225  Identities=10%  Similarity=0.023  Sum_probs=154.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++++||||||+||||++++++|+++|++|++++|+.... ... .+.....++.++.+|++|.+++.++++       .
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4468999999999999999999999999999999975433 211 111112357889999999998887765       4


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCC-----cceEEEeccceeeeecCCCCCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSES-----VKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~-----~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                      +|+|||+||............++|  ...+++|+.++.++++++    .+.+.     ..++|++||...+++.+     
T Consensus        84 id~vi~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----  156 (287)
T PRK06194         84 VHLLFNNAGVGAGGLVWENSLADW--EWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP-----  156 (287)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHH--HHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-----
Confidence            799999999865533223333333  467999999999977774    33331     15899999987654321     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCC-----CcEEEEecCccccCCCCCCCCchHHHHHhhh
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENK-----IDLVSVITTTVAGPFLTSSVPSSIQVLLSPI  225 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~  225 (348)
                                          +...|+.+|.+.|.+++.++++.+     +++..+.|+.|..+..            ...
T Consensus       157 --------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~------------~~~  204 (287)
T PRK06194        157 --------------------AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIW------------QSE  204 (287)
T ss_pred             --------------------CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccc------------ccc
Confidence                                224699999999999999887643     6666666665543321            111


Q ss_pred             cCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCC
Q 035965          226 TGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYP  291 (348)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~  291 (348)
                      .+++..+  .+   .+.+.|+|++++|++..+....              .++..|+++.+.+.+.
T Consensus       205 ~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~--------------~~s~~dva~~i~~~~~  251 (287)
T PRK06194        205 RNRPADL--AN---TAPPTRSQLIAQAMSQKAVGSG--------------KVTAEEVAQLVFDAIR  251 (287)
T ss_pred             ccCchhc--cc---CccccchhhHHHHHHHhhhhcc--------------CCCHHHHHHHHHHHHH
Confidence            2222111  12   2347888999999888764321              1688888888888664

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.90  E-value=9.6e-23  Score=180.01  Aligned_cols=230  Identities=19%  Similarity=0.152  Sum_probs=157.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc---cCCCCCeEEEEccCCCcchHHHhh-------c
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK---WTRSDRLRLFQADLQVEGSFDKAV-------M   78 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~-------~   78 (348)
                      +++++|||||+|+||+++++.|+++|++|++++|++++. .....   .....++.++.+|++|++++.. +       .
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            467899999999999999999999999999999986543 22111   1112468899999999988765 3       2


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      .+|+|||+|+............+++  ...+++|+.++.++++.+    ++.+ .+++|++||...+.+..         
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~---------  148 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEY--RKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGFP---------  148 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCCC---------
Confidence            5799999998755433222222222  467889999998888885    4444 67899999976443321         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHH---hCCCcEEEEecCccccCCCCCCCCc----------hHHHH
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFAN---ENKIDLVSVITTTVAGPFLTSSVPS----------SIQVL  221 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~----------~~~~~  221 (348)
                                      +.+.|+.+|...+.+++.++.   .++++++++||+.++++......+.          ....+
T Consensus       149 ----------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  212 (280)
T PRK06914        149 ----------------GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYM  212 (280)
T ss_pred             ----------------CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHH
Confidence                            334699999999999998863   3589999999999988743221100          00000


Q ss_pred             HhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChH
Q 035965          222 LSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPIS  280 (348)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~  280 (348)
                      .... +   .+.        ...+.+++++|+|++++.+++++.....|+++ +..+++.
T Consensus       213 ~~~~-~---~~~--------~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (280)
T PRK06914        213 KKIQ-K---HIN--------SGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL  260 (280)
T ss_pred             HHHH-H---HHh--------hhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence            0000 0   000        01234789999999999999988766667765 3444443

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3e-22  Score=174.10  Aligned_cols=216  Identities=17%  Similarity=0.143  Sum_probs=151.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++++||||+|+||++|+++|+++|++|+++.|+.... ..........++.++.+|++|.+++.++++       ++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999999986543 211111112457899999999998877664       68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+++............+++  ...+++|+.++.++++.+.    +.+ .++||++||....++..           
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~-----------  148 (252)
T PRK06138         83 DVLVNNAGFGCGGTVVTTDEADW--DAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGGR-----------  148 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHH--HHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCC-----------
Confidence            99999999754433222222222  4678999999987777654    444 67999999986554321           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCch--HHHHHhhhcCCCCc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSS--IQVLLSPITGDSKF  231 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~  231 (348)
                                    ....|+.+|.+.+.+++.++++.   +++++.+||+.++++.........  ...+.....+.   
T Consensus       149 --------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---  211 (252)
T PRK06138        149 --------------GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR---  211 (252)
T ss_pred             --------------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc---
Confidence                          23469999999999999988764   899999999999988533210000  00000000000   


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                             .   ....|++++|++++++.++.++.
T Consensus       212 -------~---~~~~~~~~~d~a~~~~~l~~~~~  235 (252)
T PRK06138        212 -------H---PMNRFGTAEEVAQAALFLASDES  235 (252)
T ss_pred             -------C---CCCCCcCHHHHHHHHHHHcCchh
Confidence                   0   11237899999999999998764

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.90  E-value=4.8e-22  Score=173.62  Aligned_cols=224  Identities=17%  Similarity=0.070  Sum_probs=147.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcccc-ccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQI-FSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|+++||||+|+||++++++|+++|++|++++|+...... ..+.....++.++.+|++|.+++.++++       +
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGR   84 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            3567899999999999999999999999999999997532111 1111122357789999999887766654       5


Q ss_pred             CCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           80 CDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        80 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +|++||+|+.... ......+.++|  ...+++|+.++..+++.+.    +.+ .++||++||...++   .        
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~---~--------  150 (260)
T PRK12823         85 IDVLINNVGGTIWAKPFEEYEEEQI--EAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRG---I--------  150 (260)
T ss_pred             CeEEEECCccccCCCChhhCChHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccC---C--------
Confidence            8999999985321 11112222223  4668889888876665554    444 57899999976431   1        


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCC---------CCCchHHHHH
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTS---------SVPSSIQVLL  222 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~---------~~~~~~~~~~  222 (348)
                                      +..+|+.+|.+.+.+++.++.+.   +++++.++|+.|++|....         ....+...+.
T Consensus       151 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  214 (260)
T PRK12823        151 ----------------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIV  214 (260)
T ss_pred             ----------------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHH
Confidence                            12359999999999999998775   8999999999999974210         0011111111


Q ss_pred             hhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--C-CceEEEec
Q 035965          223 SPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--A-QGQYICCV  274 (348)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~  274 (348)
                      +...... +   .+.         +.+++|+++++.+++....  . +..+++.+
T Consensus       215 ~~~~~~~-~---~~~---------~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g  256 (260)
T PRK12823        215 DQTLDSS-L---MKR---------YGTIDEQVAAILFLASDEASYITGTVLPVGG  256 (260)
T ss_pred             HHHhccC-C---ccc---------CCCHHHHHHHHHHHcCcccccccCcEEeecC
Confidence            1111111 1   122         4589999999999886542  2 33456543

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.90  E-value=3.6e-22  Score=172.75  Aligned_cols=221  Identities=20%  Similarity=0.128  Sum_probs=155.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      |++++|+||||+|+||.+++++|+++|++|++++|++.+. ... .......++.++.+|+.|++++.++++       .
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4457999999999999999999999999999999987643 111 111123468889999999988877665       3


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+++............+++  ...++.|+.++.++++++.    +.+ .+++|++||.....+..          
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~~----------  149 (246)
T PRK05653         83 LDILVNNAGITRDALLPRMSEEDW--DRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGNP----------  149 (246)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCCC----------
Confidence            699999998755432222222222  4678899999999998885    344 67999999976433111          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.+|.+.|.+++.++++   .+++++++||+.++|+.....    ...+......   .+
T Consensus       150 ---------------~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~----~~~~~~~~~~---~~  207 (246)
T PRK05653        150 ---------------GQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL----PEEVKAEILK---EI  207 (246)
T ss_pred             ---------------CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh----hHHHHHHHHh---cC
Confidence                           3356999999999999888765   479999999999999865421    1111111111   11


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEec
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCV  274 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~  274 (348)
                      +          .+.+++++|+++++..++.....   +..|++++
T Consensus       208 ~----------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  242 (246)
T PRK05653        208 P----------LGRLGQPEEVANAVAFLASDAASYITGQVIPVNG  242 (246)
T ss_pred             C----------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence            1          23488999999999999875332   33466554

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=3.2e-22  Score=174.22  Aligned_cols=225  Identities=15%  Similarity=0.109  Sum_probs=155.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+++|+||||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            35678999999999999999999999999999999976543 2111 11112357889999999988877764       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      .+|+|||+|+............++|  +..+++|+.++.++++++.+.   ...+++|++||.....+.+          
T Consensus        87 ~~d~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~----------  154 (255)
T PRK07523         87 PIDILVNNAGMQFRTPLEDFPADAF--ERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARP----------  154 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCC----------
Confidence            4799999999765433323333333  467889999999999988753   1257899999965322110          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     ....|+.+|.+.|.+++.++.+   +++++..+||+.+.++........  ..+...+...   .
T Consensus       155 ---------------~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~--~~~~~~~~~~---~  214 (255)
T PRK07523        155 ---------------GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD--PEFSAWLEKR---T  214 (255)
T ss_pred             ---------------CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC--HHHHHHHHhc---C
Confidence                           2346999999999999998864   589999999999998853321110  0111111111   1


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEec
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QG-QYICCV  274 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~  274 (348)
                      +          .+.+..++|+|+++.+++.....  .| .+++.+
T Consensus       215 ~----------~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~g  249 (255)
T PRK07523        215 P----------AGRWGKVEELVGACVFLASDASSFVNGHVLYVDG  249 (255)
T ss_pred             C----------CCCCcCHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence            1          12266899999999999875432  34 455543

>PRK06182 short chain dehydrogenase; Validated

Probab=99.90  E-value=3e-22  Score=176.16  Aligned_cols=229  Identities=19%  Similarity=0.141  Sum_probs=152.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      ++++|+||||+|+||++++++|+++|++|++++|+..+. ....     .+++++.+|++|.+++.++++       ++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id   76 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-----LGVHPLSLDVTDEASIKAAVDTIIAEEGRID   76 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            468999999999999999999999999999999986543 2211     258899999999998887765       689


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHH----HHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLL----KACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll----~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+||........+...++|  ...+++|+.++..++    ..+++.+ .+++|++||.....+.+            
T Consensus        77 ~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~------------  141 (273)
T PRK06182         77 VLVNNAGYGSYGAIEDVPIDEA--RRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYTP------------  141 (273)
T ss_pred             EEEECCCcCCCCchhhCCHHHH--HHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCCC------------
Confidence            9999999764433223333333  477899998855444    4555555 67999999965321111            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc--c
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF--F  232 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~  232 (348)
                                   ....|+.+|.+.+.+.+.++.+   .+++++++||+.+.++.......    .+.....+....  .
T Consensus       142 -------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~  204 (273)
T PRK06182        142 -------------LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAAD----HLLKTSGNGAYAEQA  204 (273)
T ss_pred             -------------CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhh----hhcccccccchHHHH
Confidence                         1235999999999988877643   58999999999998875321100    000000000000  0


Q ss_pred             c-cccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 035965          233 S-ILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVK  275 (348)
Q Consensus       233 ~-~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~  275 (348)
                      . ...........+.+.+++|+|++++.++........|+++..
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~~  248 (273)
T PRK06182        205 QAVAASMRSTYGSGRLSDPSVIADAISKAVTARRPKTRYAVGFG  248 (273)
T ss_pred             HHHHHHHHHhhccccCCCHHHHHHHHHHHHhCCCCCceeecCcc
Confidence            0 000000001234477999999999999987655566776544

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.90  E-value=1.3e-22  Score=176.93  Aligned_cols=232  Identities=15%  Similarity=0.112  Sum_probs=158.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++++||||+|+||.++++.|+++|++|++++|+..+. .....  ....+.++.+|++|.+++..+++       .+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALE--IGPAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH--hCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3467899999999999999999999999999999987544 22211  12357889999999988877665       58


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |++||+|+........+...++|  ...+++|+.++.++++++...    +...++|++||.....+.+           
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------  148 (257)
T PRK07067         82 DILFNNAALFDMAPILDISRDSY--DRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA-----------  148 (257)
T ss_pred             CEEEECCCcCCCCCcccCCHHHH--HHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC-----------
Confidence            99999999754333222223333  478999999999999998643    1125899999975332110           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.||.+.+.+.+.++++   .+++++.++|+.++++......    ..+... ........
T Consensus       149 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~-~~~~~~~~  209 (257)
T PRK07067        149 --------------LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVD----ALFARY-ENRPPGEK  209 (257)
T ss_pred             --------------CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhh----hhhhhc-cCCCHHHH
Confidence                          3357999999999999988875   6899999999999998533210    001000 00000000


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCVK  275 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  275 (348)
                       ......+...+.+++++|+|+++.+++.....   +..|++.++
T Consensus       210 -~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  253 (257)
T PRK07067        210 -KRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGG  253 (257)
T ss_pred             -HHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCC
Confidence             00011122356699999999999999986532   456776543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.89  E-value=9e-22  Score=170.56  Aligned_cols=223  Identities=17%  Similarity=0.116  Sum_probs=154.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cc-ccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++++++||||+|+||++++++|+++|++|+++.++....  .. ..+.....++.++.+|++|.+++.++++       
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4468999999999999999999999999998766543222  11 1111222468889999999998877765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      .+|+|||+|+............+++  ...+++|+.++..+++++...   ...+++|++||.....+..          
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  151 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDW--ERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGF----------  151 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCC----------
Confidence            3799999999755433222222333  478899999999999988742   1146899999975433211          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.+|.+.+.+++.++.+   .++++++++|+.+.++.... .+..  .......      
T Consensus       152 ---------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~~--~~~~~~~------  207 (247)
T PRK12935        152 ---------------GQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPEE--VRQKIVA------  207 (247)
T ss_pred             ---------------CCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccHH--HHHHHHH------
Confidence                           2346999999999998888765   48999999999997764221 1100  0001100      


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~~~~  275 (348)
                              ..+.+++++++|+++++.++++...  .+..|++.+.
T Consensus       208 --------~~~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        208 --------KIPKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             --------hCCCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence                    1124558999999999999987642  3456776554

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.89  E-value=7.3e-22  Score=170.88  Aligned_cols=220  Identities=17%  Similarity=0.199  Sum_probs=155.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGV   83 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~V   83 (348)
                      .+++++++||||+|+||+++++.|+++|++|++++|+..+. .+...    .+..++.+|++|.+++.++++   .+|+|
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~d~v   81 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGE----TGCEPLRLDVGDDAAIRAALAAAGAFDGL   81 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hCCeEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            45678999999999999999999999999999999986544 22211    136788999999988877765   48999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ||+|+........+...++|  +..++.|+.++.++++++.+.    +..++||++||...+++..              
T Consensus        82 i~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------  145 (245)
T PRK07060         82 VNCAGIASLESALDMTAEGF--DRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP--------------  145 (245)
T ss_pred             EECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC--------------
Confidence            99999754432222222223  467889999999999988753    1136899999987554321              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                 +...|+.+|.+.|.+++.++++   .+++++.+||+.++++........... .......    .    
T Consensus       146 -----------~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~-~~~~~~~----~----  205 (245)
T PRK07060        146 -----------DHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQK-SGPMLAA----I----  205 (245)
T ss_pred             -----------CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHH-HHHHHhc----C----
Confidence                       2246999999999999998876   379999999999999864321110000 0000000    0    


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEe
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDRA--QGQ-YICC  273 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~~-y~~~  273 (348)
                            ..+.|++++|+++++..++..+..  .|. +++.
T Consensus       206 ------~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~  239 (245)
T PRK07060        206 ------PLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVD  239 (245)
T ss_pred             ------CCCCCCCHHHHHHHHHHHcCcccCCccCcEEeEC
Confidence                  123388999999999999986532  344 4443

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.8e-22  Score=171.36  Aligned_cols=225  Identities=19%  Similarity=0.132  Sum_probs=152.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEE-EcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHAT-VRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~-~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++++|+||||+|+||++++++|+++|++|+++ .|+..+. ... ........+.++.+|++|.+++.++++       
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            345899999999999999999999999999775 4554322 111 111112357889999999998877665       


Q ss_pred             ------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCC
Q 035965           79 ------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 ------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                            ++|+|||+||........+...+.|  ...+++|+.++.++++++.+. ...+++|++||..++.+.+      
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~------  155 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIF--DEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT------  155 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC------
Confidence                  4899999999754332222222222  467889999999999998763 2145899999986543211      


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                                         +...|+.+|.+.|.+.+.++++   .++++++++|+.++++........  ..+.....+.
T Consensus       156 -------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~--~~~~~~~~~~  214 (254)
T PRK12746        156 -------------------GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDD--PEIRNFATNS  214 (254)
T ss_pred             -------------------CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccC--hhHHHHHHhc
Confidence                               2346999999999998888765   579999999999988753221000  0011111111


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR---AQGQYICCVK  275 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  275 (348)
                      .             ....+++++|+++++..++..+.   .+..|++.+.
T Consensus       215 ~-------------~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        215 S-------------VFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             C-------------CcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            0             11236799999999998887643   2456776543

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.5e-22  Score=171.55  Aligned_cols=225  Identities=19%  Similarity=0.087  Sum_probs=151.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++++++||||+||||++++++|+++|++|++++|+..+.  ... .+.....++.++.+|++|++++..+++       
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4468999999999999999999999999999999875422  111 111112357889999999998877654       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ++|+|||+|+......  .+     + ...+++|+.++.++++++.+. ....++|++||....+...         .+.
T Consensus        84 ~~d~vi~~ag~~~~~~--~~-----~-~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~---------~~~  146 (248)
T PRK07806         84 GLDALVLNASGGMESG--MD-----E-DYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT---------VKT  146 (248)
T ss_pred             CCcEEEECCCCCCCCC--CC-----c-ceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc---------ccC
Confidence            5899999998642211  12     2 367899999999999999864 2135899999954321110         011


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                      .+           ....|+.||.++|.+++.++.+   .++++++++|+.+-++....        +...  ..+..+. 
T Consensus       147 ~~-----------~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~--------~~~~--~~~~~~~-  204 (248)
T PRK07806        147 MP-----------EYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTAT--------LLNR--LNPGAIE-  204 (248)
T ss_pred             Cc-----------cccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhh--------hhcc--CCHHHHH-
Confidence            10           2347999999999999998765   57999999988776653211        0000  0000000 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCCCCc-eEEEeccC
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDRAQG-QYICCVKS  276 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~~  276 (348)
                       ...   .....+++++|++++++.+++.....| .|++++..
T Consensus       205 -~~~---~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~  243 (248)
T PRK07806        205 -ARR---EAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGAD  243 (248)
T ss_pred             -HHH---hhhcccCCHHHHHHHHHHHhhccccCccEEEecCcc
Confidence             000   011248999999999999999765555 57776553

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.89  E-value=9.5e-22  Score=183.22  Aligned_cols=230  Identities=19%  Similarity=0.199  Sum_probs=157.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccccc--------C--CCCCeEEEEccCCCcchHHHhh
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKW--------T--RSDRLRLFQADLQVEGSFDKAV   77 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~--------~--~~~~~~~~~~Dl~d~~~~~~~~   77 (348)
                      +++++||||||+|+||++++++|+++|++|++++|+..+. .+....        .  ...+++++.+|+.|.+++.+++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            3567899999999999999999999999999999987654 221100        0  1135889999999999999999


Q ss_pred             cCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           78 MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        78 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      .++|+|||++|......  .+     . ...+.+|+.++.++++++++.+ +++||++||.++... ..        .+.
T Consensus       158 ggiDiVVn~AG~~~~~v--~d-----~-~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~-g~--------p~~  219 (576)
T PLN03209        158 GNASVVICCIGASEKEV--FD-----V-TGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKV-GF--------PAA  219 (576)
T ss_pred             cCCCEEEEccccccccc--cc-----h-hhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhccc-Cc--------ccc
Confidence            99999999998643211  11     1 3567899999999999999888 899999999864210 01        000


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                      .+          ...+.|...|..+|..+..    .|+++++||||.++++.+.......   + ....+.   .. .+ 
T Consensus       220 ~~----------~sk~~~~~~KraaE~~L~~----sGIrvTIVRPG~L~tp~d~~~~t~~---v-~~~~~d---~~-~g-  276 (576)
T PLN03209        220 IL----------NLFWGVLCWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHN---L-TLSEED---TL-FG-  276 (576)
T ss_pred             ch----------hhHHHHHHHHHHHHHHHHH----cCCCEEEEECCeecCCccccccccc---e-eecccc---cc-CC-
Confidence            00          0234577888888888764    5899999999999987543210000   0 000000   00 11 


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCCCC--CceEEEe-cc---CcChHHHHHHHH
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMENDRA--QGQYICC-VK---SCPISEFIDHLK  287 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~~y~~~-~~---~~s~~el~~~i~  287 (348)
                              -.+..+|||+++++++.++..  +.+|.+. +.   ..++.++++.|-
T Consensus       277 --------r~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~ip  324 (576)
T PLN03209        277 --------GQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKIP  324 (576)
T ss_pred             --------CccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhcc
Confidence                    167899999999999986642  4567543 33   245555555443

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.3e-21  Score=170.89  Aligned_cols=240  Identities=18%  Similarity=0.135  Sum_probs=163.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccC--CCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWT--RSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      ++.++++||||+|+||+++++.|+++|++|++++|+..+. .... +..  ...++.++.+|++|.+++.++++      
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5568999999999999999999999999999999976543 1111 110  12467889999999988877665      


Q ss_pred             -CCCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhcC---CcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKSE---SVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       .+|+|||+|+...... ......++|  ...++.|+.++..+++++.+..   ..++||++||...+.+.         
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  153 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAW--RRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH---------  153 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC---------
Confidence             6899999998643211 111222222  4678899999999998775431   14689999997643211         


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                      ++.+.|+.+|.+.|.+++.++++.   +++++.+||+.+.++......... ..........  
T Consensus       154 ----------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~-~~~~~~~~~~--  214 (276)
T PRK05875        154 ----------------RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESP-ELSADYRACT--  214 (276)
T ss_pred             ----------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCH-HHHHHHHcCC--
Confidence                            033579999999999999988764   699999999999876433211100 0000111000  


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEe-ccCc----ChHHHHHHHHHhC
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICC-VKSC----PISEFIDHLKLEY  290 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~-~~~~----s~~el~~~i~~~~  290 (348)
                                  ....+++++|+++++.++++.+..   +..|+++ +..+    +..|+++.+.+..
T Consensus       215 ------------~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~  270 (276)
T PRK05875        215 ------------PLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGAD  270 (276)
T ss_pred             ------------CCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHH
Confidence                        112267899999999999987643   3456664 4444    7777777766543

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=167.82  Aligned_cols=210  Identities=17%  Similarity=0.170  Sum_probs=145.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGVFH   85 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~Vih   85 (348)
                      +||+++||||+|+||+++++.|+++ ++|++++|+..+. .+..   ..++++++.+|++|.+++.++++   ++|+|||
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   77 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAA---ELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVH   77 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHH---HhccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence            4679999999999999999999999 9999999986543 2211   11358899999999999988876   5899999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHH----HHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCC
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNL----LKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTP  161 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~  161 (348)
                      +++............++|  ...++.|+.+..++    ++++++.+  +++|++||..++.+..                
T Consensus        78 ~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~~~~----------------  137 (227)
T PRK08219         78 NAGVADLGPVAESTVDEW--RATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGLRANP----------------  137 (227)
T ss_pred             CCCcCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhcCcCC----------------
Confidence            999754332112222222  35688888885444    44444444  6899999976543211                


Q ss_pred             cchhhccCCCcchhHhhHHHHHHHHHHHHHh-CC-CcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccc
Q 035965          162 IHHVWNKKASGWVYVLSKLLSEETAFKFANE-NK-IDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVS  239 (348)
Q Consensus       162 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~-~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (348)
                               +...|+.+|.+.|.+++.++.+ .+ +++..++|+.+.++....        +... .+.  ..       
T Consensus       138 ---------~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~--------~~~~-~~~--~~-------  190 (227)
T PRK08219        138 ---------GWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRG--------LVAQ-EGG--EY-------  190 (227)
T ss_pred             ---------CCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhh--------hhhh-hcc--cc-------
Confidence                     2346999999999988887654 34 899999988766543211        0000 010  01       


Q ss_pred             cCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe
Q 035965          240 NRMGSIALVHIEDICNAHIFLMENDRAQGQYICC  273 (348)
Q Consensus       240 ~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~  273 (348)
                         ..+.+++++|++++++.+++++..+..|++.
T Consensus       191 ---~~~~~~~~~dva~~~~~~l~~~~~~~~~~~~  221 (227)
T PRK08219        191 ---DPERYLRPETVAKAVRFAVDAPPDAHITEVV  221 (227)
T ss_pred             ---CCCCCCCHHHHHHHHHHHHcCCCCCccceEE
Confidence               1234899999999999999987655566654

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.9e-22  Score=174.56  Aligned_cols=233  Identities=16%  Similarity=0.116  Sum_probs=152.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      ++.+++|||||+|+||++++++|+++|++|++++|+.... .+...... .++.++.+|++|++++..+++       ++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG-AKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4568999999999999999999999999999999976543 22211111 156889999999998877654       68


Q ss_pred             CEEEEccccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           81 DGVFHVAASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        81 d~Vih~a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      |+|||+|+..... .......++|  ...++.|+.++.++++++..    .+..++++++||.....+.+          
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~----------  155 (264)
T PRK12829         88 DVLVNNAGIAGPTGGIDEITPEQW--EQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYP----------  155 (264)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCC----------
Confidence            9999999976222 2112222222  47899999999999998743    33116788888765332211          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.+|.+.|.+++.++++   .+++++++||++++|+......+.    ..... +.. ..
T Consensus       156 ---------------~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~----~~~~~-~~~-~~  214 (264)
T PRK12829        156 ---------------GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEA----RAQQL-GIG-LD  214 (264)
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhh----hhhcc-CCC-hh
Confidence                           2235999999999999998765   379999999999999864321100    00000 100 00


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC--CC-CceEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND--RA-QGQYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~-~~~y~~~~~  275 (348)
                      ............+.+++++|+++++..++...  .. +..|++.++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g  260 (264)
T PRK12829        215 EMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDGN  260 (264)
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCC
Confidence            00000000011234899999999999888643  22 335666543

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.7e-21  Score=169.81  Aligned_cols=221  Identities=19%  Similarity=0.125  Sum_probs=153.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~V   83 (348)
                      +++|+||||+|+||++++++|+++|++|++++|+..+..      ...+++++.+|++|++++.++++       .+|+|
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l   77 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA------PIPGVELLELDVTDDASVQAAVDEVIARAGRIDVL   77 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc------ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence            568999999999999999999999999999999865431      11368899999999998888775       47999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ||+||........+...+++  ...+++|+.++.++++++    ++.+ .++||++||...+.+.+              
T Consensus        78 i~~ag~~~~~~~~~~~~~~~--~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~--------------  140 (270)
T PRK06179         78 VNNAGVGLAGAAEESSIAQA--QALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAP--------------  140 (270)
T ss_pred             EECCCCCCCcCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCCC--------------
Confidence            99999765443333333333  578999999999999885    4445 68999999976443211              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCc--hHHHHHhhhcCCCCcccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPS--SIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~  234 (348)
                                 ....|+.+|...|.+++.++.+   .++++++++|+.+.++........  ...............+. 
T Consensus       141 -----------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  208 (270)
T PRK06179        141 -----------YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVA-  208 (270)
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHH-
Confidence                       2246999999999999888655   589999999999988754322110  00000000000000000 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC  273 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~  273 (348)
                        .     ........+|+++.++.++..+.....|.+.
T Consensus       209 --~-----~~~~~~~~~~va~~~~~~~~~~~~~~~~~~~  240 (270)
T PRK06179        209 --K-----AVKKADAPEVVADTVVKAALGPWPKMRYTAG  240 (270)
T ss_pred             --h-----ccccCCCHHHHHHHHHHHHcCCCCCeeEecC
Confidence              0     0111457899999999999887655566553

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.8e-21  Score=168.94  Aligned_cols=221  Identities=17%  Similarity=0.147  Sum_probs=153.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++++++||||+|+||.+++++|+++|++|++++|+.... .+... .....++.++.+|++|.+++.++++       .
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            3568999999999999999999999999999999976533 22111 1112357788999999988776554       5


Q ss_pred             CCEEEEccccCcc---ccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           80 CDGVFHVAASMEF---DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        80 ~d~Vih~a~~~~~---~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      +|+|||+|+....   ........++|  ...+++|+.++.++++++...   ...++||++||...+.           
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------  150 (250)
T PRK07774         84 IDYLVNNAAIYGGMKLDLLITVPWDYY--KKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL-----------  150 (250)
T ss_pred             CCEEEECCCCcCCCCCCChhhCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-----------
Confidence            8999999997532   11112222222  467899999999999988753   1146999999977532           


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +.+.|+.+|.+.|.+++.++++.   ++++++++|+.+..+......+..  .......+.+ 
T Consensus       151 -----------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~--~~~~~~~~~~-  210 (250)
T PRK07774        151 -----------------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKE--FVADMVKGIP-  210 (250)
T ss_pred             -----------------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHH--HHHHHHhcCC-
Confidence                             22469999999999999998774   799999999998877644321211  1111111111 


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR---AQGQYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  275 (348)
                       .            .-+.+++|++++++.++....   .+..|++.+.
T Consensus       211 -~------------~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g  245 (250)
T PRK07774        211 -L------------SRMGTPEDLVGMCLFLLSDEASWITGQIFNVDGG  245 (250)
T ss_pred             -C------------CCCcCHHHHHHHHHHHhChhhhCcCCCEEEECCC
Confidence             1            115579999999999988642   2445776543

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=1.5e-21  Score=169.47  Aligned_cols=221  Identities=19%  Similarity=0.146  Sum_probs=151.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++||||||+|+||.+++++|+++|++|++++|++.+. ..........++.++.+|+.|++++..+++       .+
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4567999999999999999999999999999999987544 222111112357899999999999887764       57


Q ss_pred             CEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           81 DGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        81 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      |+|||+|+...... ..+.+.++|  ...+++|+.++..+++.+..    .+ .++||++||...+++.+          
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----------  149 (251)
T PRK07231         83 DILVNNAGTTHRNGPLLDVDEAEF--DRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPRP----------  149 (251)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCCC----------
Confidence            99999998743322 112222222  47899999998888877764    34 67899999987544221          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.+|...+.+++.++++.   +++++.++|+.+.++....................    
T Consensus       150 ---------------~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~----  210 (251)
T PRK07231        150 ---------------GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT----  210 (251)
T ss_pred             ---------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC----
Confidence                           33469999999999999887653   79999999999976643221000000000000000    


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCCC--CceE
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QGQY  270 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~~y  270 (348)
                               .....+++++|+|++++.++..+..  .|.+
T Consensus       211 ---------~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~  241 (251)
T PRK07231        211 ---------IPLGRLGTPEDIANAALFLASDEASWITGVT  241 (251)
T ss_pred             ---------CCCCCCcCHHHHHHHHHHHhCccccCCCCCe
Confidence                     0122378999999999999976532  4554

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=1.3e-21  Score=170.07  Aligned_cols=227  Identities=15%  Similarity=0.059  Sum_probs=153.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--c-cccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--Q-IFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++++||||||+||||++++++|+++|++|++..|+....  . .........++.++.+|+++.+++..+++       
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            3468999999999999999999999999998877643221  1 11111112356788999999988776654       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ++|+|||+||........+...+.|  +..+++|+.++.++++++.+. ...++||++||...+.+.+            
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------  149 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLI--DKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAY------------  149 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH--HHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCC------------
Confidence            5899999999744332222211222  467899999999999988754 2135899999976542211            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                                   +.+.|+.+|...|.+++.++++.  ++.+.+++|+.+.++.......     +....   .....  
T Consensus       150 -------------~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~-----~~~~~---~~~~~--  206 (252)
T PRK06077        150 -------------GLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFK-----VLGMS---EKEFA--  206 (252)
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhh-----ccccc---HHHHH--
Confidence                         34579999999999999998875  6899999999998764321000     00000   00000  


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCCCC-CceEEEecc
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMENDRA-QGQYICCVK  275 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~-~~~y~~~~~  275 (348)
                      ....   ..+.+++++|+|++++.++..+.. ++.|++.+.
T Consensus       207 ~~~~---~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~g  244 (252)
T PRK06077        207 EKFT---LMGKILDPEEVAEFVAAILKIESITGQVFVLDSG  244 (252)
T ss_pred             HhcC---cCCCCCCHHHHHHHHHHHhCccccCCCeEEecCC
Confidence            0000   123489999999999999986654 456776544

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=3.1e-21  Score=168.13  Aligned_cols=222  Identities=17%  Similarity=0.097  Sum_probs=152.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cc-ccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +|+|+||||+|+||+++++.|+++|++|++++|...+.  .. ........++.++.+|++|.+++.++++       .+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            57899999999999999999999999999999865422  11 1111122468899999999988776554       58


Q ss_pred             CEEEEccccCcccc--ccccccccchhhhhhhhhHHHHHHHHHHHhhc----C--C---cceEEEeccceeeeecCCCCC
Q 035965           81 DGVFHVAASMEFDI--NVKDNIETYVQSTVINPAIQSTLNLLKACLKS----E--S---VKRVVLTSSVSTITAKDSSGE  149 (348)
Q Consensus        81 d~Vih~a~~~~~~~--~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~--~---~~~~v~~SS~~~~~~~~~~~~  149 (348)
                      |+|||+|+......  ....+.++|  +..++.|+.++.++++++.+.    .  .   ..++|++||...+.+..    
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----  155 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESF--DRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP----  155 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHH--HHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC----
Confidence            99999998643221  112222223  478999999999999887542    1  1   46799999977544321    


Q ss_pred             CCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhc
Q 035965          150 WRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPIT  226 (348)
Q Consensus       150 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~  226 (348)
                                           +.+.|+.+|.+.|.+++.++.+   ++++++++||+.+.++........    +.+...
T Consensus       156 ---------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~----~~~~~~  210 (256)
T PRK12745        156 ---------------------NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAK----YDALIA  210 (256)
T ss_pred             ---------------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchh----HHhhhh
Confidence                                 2246999999999999999865   689999999999998754321111    111111


Q ss_pred             CCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 035965          227 GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR---AQGQYICCVK  275 (348)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  275 (348)
                      ..  ..+          .+.|.+++|+++++..++....   .+..|++.+.
T Consensus       211 ~~--~~~----------~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg  250 (256)
T PRK12745        211 KG--LVP----------MPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGG  250 (256)
T ss_pred             hc--CCC----------cCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCC
Confidence            10  111          2337799999999998886542   2445666543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.88  E-value=2.5e-21  Score=168.10  Aligned_cols=223  Identities=19%  Similarity=0.183  Sum_probs=152.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++|||||+|+||++++++|+++|++|++++|+..+. .... ......++.++.+|++|.+++.++++       ++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999976543 2211 11122468899999999988877664       58


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+++..........+.++|  ...+++|+.++.++++++.    +.+ .+++|++||...+.+..           
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~~-----------  147 (250)
T TIGR03206        82 DVLVNNAGWDKFGPFTKTEPPLW--ERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSS-----------  147 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCCC-----------
Confidence            99999998754322222222223  4679999999999888775    344 67899999987654322           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCC---CchHHHHHhhhcCCCC
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSV---PSSIQVLLSPITGDSK  230 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~  230 (348)
                                    ....|+.+|.+.+.+++.++++.   +++++++||+.++++......   .............   
T Consensus       148 --------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~---  210 (250)
T TIGR03206       148 --------------GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRA---  210 (250)
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhc---
Confidence                          22369999999999999988764   899999999999987422100   0000001111111   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEec
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QG-QYICCV  274 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~  274 (348)
                       .+ .+         .+...+|+|+++..++.....  .| .+.+.+
T Consensus       211 -~~-~~---------~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  246 (250)
T TIGR03206       211 -IP-LG---------RLGQPDDLPGAILFFSSDDASFITGQVLSVSG  246 (250)
T ss_pred             -CC-cc---------CCcCHHHHHHHHHHHcCcccCCCcCcEEEeCC
Confidence             01 11         255789999999998876432  34 455543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.88  E-value=1.3e-21  Score=170.86  Aligned_cols=232  Identities=13%  Similarity=0.069  Sum_probs=154.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cC--CCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WT--RSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++|+||||+|+||+++++.|+++|++|++++|+..+. ..... ..  ...++.++.+|++|.+++..+++       .
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999976533 22111 00  11358899999999888776554       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+|+........+...++|  ...+++|+.++..+++++..    .+...++|++||....++..          
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~----------  149 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDF--DRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK----------  149 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHH--HHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC----------
Confidence            799999998755433233333333  47789999998888887754    22135899999965332211          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC-Cc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS-KF  231 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~  231 (348)
                                     ....|+.+|.+.+.+++.++.+   +++++..+||+.++++.....   .+..+.... +.. ..
T Consensus       150 ---------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~---~~~~~~~~~-~~~~~~  210 (259)
T PRK12384        150 ---------------HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQS---LLPQYAKKL-GIKPDE  210 (259)
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhh---hhHHHHHhc-CCChHH
Confidence                           2246999999999998888753   689999999999987643221   111111111 100 00


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  275 (348)
                      +  ......+...+.+++++|+++++.+++.+...   +..|++.+.
T Consensus       211 ~--~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g  255 (259)
T PRK12384        211 V--EQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG  255 (259)
T ss_pred             H--HHHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence            0  00011122456689999999999998875432   345776544

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=2.2e-21  Score=168.47  Aligned_cols=224  Identities=19%  Similarity=0.117  Sum_probs=151.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEE-EcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHAT-VRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~-~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++++||||+|+||++++++|+++|++|+++ .|+..+. .... ......++.++.+|++|++++..+++       .
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45799999999999999999999999998764 5654332 1111 11122467889999999998877665       4


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      +|+|||+|+........+...++|  ...+++|+.++..+++++...   ...++||++||...+.+.+           
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------  149 (250)
T PRK08063         83 LDVFVNNAASGVLRPAMELEESHW--DWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLE-----------  149 (250)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC-----------
Confidence            899999998754333223322222  356889999999999888753   1256999999975432111           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.+|.+.|.+++.++.+   .+++++.++|+.+..+..... +.... +.......   .+
T Consensus       150 --------------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~-~~~~~-~~~~~~~~---~~  210 (250)
T PRK08063        150 --------------NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHF-PNREE-LLEDARAK---TP  210 (250)
T ss_pred             --------------CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhc-cCchH-HHHHHhcC---CC
Confidence                          3346999999999999998765   579999999999987653221 11111 11111110   00


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCVK  275 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  275 (348)
                                ...+++++|+|+++.+++.++..   +..+++.+.
T Consensus       211 ----------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg  245 (250)
T PRK08063        211 ----------AGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGG  245 (250)
T ss_pred             ----------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence                      11278999999999999986532   334555443

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.2e-21  Score=166.17  Aligned_cols=211  Identities=21%  Similarity=0.203  Sum_probs=150.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc-ccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++++||||||+|+||+++++.|+++|++|++++|++.+. .. ..+  ....++++.+|+.|.+++.++++       +
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGV--PADALRIGGIDLVDPQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHH--hhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4568999999999999999999999999999999976543 11 111  11256788899999988877665       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+++............+++  ...+..|+.++.++++++.+    .+ .+++|++||...+.+.+          
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----------  149 (239)
T PRK12828         83 LDALVNIAGAFVWGTIADGDADTW--DRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAGP----------  149 (239)
T ss_pred             cCEEEECCcccCcCChhhCCHHHH--HHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCCC----------
Confidence            899999998654322222222222  36688999999999888753    34 78999999987543211          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.+|.+.+.+++.++++   .++++..+||+.++++.....                  .
T Consensus       150 ---------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------------------~  196 (239)
T PRK12828        150 ---------------GMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD------------------M  196 (239)
T ss_pred             ---------------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc------------------C
Confidence                           2346999999999998887754   589999999999998842211                  0


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEec
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QGQ-YICCV  274 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~~-y~~~~  274 (348)
                      + .+.      ...|++++|+++++.+++.+...  .|. +.+.+
T Consensus       197 ~-~~~------~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g  234 (239)
T PRK12828        197 P-DAD------FSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDG  234 (239)
T ss_pred             C-chh------hhcCCCHHHHHHHHHHHhCcccccccceEEEecC
Confidence            0 000      11278999999999999986532  344 45543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=7.5e-21  Score=165.98  Aligned_cols=217  Identities=18%  Similarity=0.131  Sum_probs=149.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .++++++|||||+|+||++++++|+++|++|++++|+.++. .... ......++.++.+|++|.+++.++++       
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            34578999999999999999999999999999999976543 1111 11122357789999999998866553       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      .+|+|||+|+............+.|  ...++.|+.++.++++++...    +..++||++||...+++...      ..
T Consensus        89 ~id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~------~~  160 (259)
T PRK08213         89 HVDILVNNAGATWGAPAEDHPVEAW--DKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP------EV  160 (259)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH--HHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc------cc
Confidence            5899999998643322222322223  467889999999999987654    22579999999765543322      00


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                     .+...|+.+|.+.|.+++.++++   .++++.+++|+.+-.+......+    .+........ +
T Consensus       161 ---------------~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~----~~~~~~~~~~-~  220 (259)
T PRK08213        161 ---------------MDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLE----RLGEDLLAHT-P  220 (259)
T ss_pred             ---------------cCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhH----HHHHHHHhcC-C
Confidence                           13357999999999999999876   37999999999887654322111    1111111111 1


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      +            .-+...+|+++++.+++...
T Consensus       221 ~------------~~~~~~~~va~~~~~l~~~~  241 (259)
T PRK08213        221 L------------GRLGDDEDLKGAALLLASDA  241 (259)
T ss_pred             C------------CCCcCHHHHHHHHHHHhCcc
Confidence            1            11457899999999888654

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.8e-21  Score=169.76  Aligned_cols=221  Identities=18%  Similarity=0.148  Sum_probs=150.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++|+|+||||+|+||++++++|+++|++|++++|++.+. ..... .....++.++.+|++|.+++..+++       +
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            3468999999999999999999999999999999976543 22111 1112467899999999988876653       5


Q ss_pred             CCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           80 CDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        80 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      +|+|||+|+.... ......+.++|  ...++.|+.++..+++++...  ...++||++||.....+.+           
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----------  149 (258)
T PRK07890         83 VDALVNNAFRVPSMKPLADADFAHW--RAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQP-----------  149 (258)
T ss_pred             ccEEEECCccCCCCCCcccCCHHHH--HHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCC-----------
Confidence            7999999986433 11112222333  578999999999999998753  1135899999976432111           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.+|.+.+.+++.++++   .+++++.+||+.++++.....       +.....+......
T Consensus       150 --------------~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~-------~~~~~~~~~~~~~  208 (258)
T PRK07890        150 --------------KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGY-------FRHQAGKYGVTVE  208 (258)
T ss_pred             --------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHH-------hhhcccccCCCHH
Confidence                          2346999999999999999865   479999999999999853221       0000000000000


Q ss_pred             -cccccccCCCCcceeeHHHHHHHHHHhhcC
Q 035965          234 -ILSSVSNRMGSIALVHIEDICNAHIFLMEN  263 (348)
Q Consensus       234 -~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~  263 (348)
                       ......+......+.+++|+++++.+++..
T Consensus       209 ~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~  239 (258)
T PRK07890        209 QIYAETAANSDLKRLPTDDEVASAVLFLASD  239 (258)
T ss_pred             HHHHHHhhcCCccccCCHHHHHHHHHHHcCH
Confidence             000000001123377999999999999875

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.2e-21  Score=167.46  Aligned_cols=234  Identities=19%  Similarity=0.183  Sum_probs=157.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccc-cccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ-IFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .++++++|||||+|+||++++++|+++|++|++++|++.+.. ...+.....++.++.+|+++.+++..+++       .
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGR   83 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            466789999999999999999999999999999999765431 11111123468899999999998877664       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|+|||+|+....... ....++|  ...++.|+.++..+++.+...  ...++||++||...+.+..            
T Consensus        84 id~vi~~ag~~~~~~~-~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------  148 (258)
T PRK08628         84 IDGLVNNAGVNDGVGL-EAGREAF--VASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQG------------  148 (258)
T ss_pred             CCEEEECCcccCCCcc-cCCHHHH--HHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCC------------
Confidence            8999999996433221 2212334  578999999999998887542  1146899999987543211            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCch--HHHHHhhhcCCCCcc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSS--IQVLLSPITGDSKFF  232 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~  232 (348)
                                   +...|+.+|...|.+++.++++   .+++++.++|+.|+++.........  ..........   .+
T Consensus       149 -------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---~~  212 (258)
T PRK08628        149 -------------GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITA---KI  212 (258)
T ss_pred             -------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHh---cC
Confidence                         2346999999999999998765   4799999999999998532110000  0000000000   01


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEeccCcChHH
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVKSCPISE  281 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~~~s~~e  281 (348)
                      + .        ...++.++|+|+++++++....  ..| .+.+.+....+++
T Consensus       213 ~-~--------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        213 P-L--------GHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             C-c--------cccCCCHHHHHHHHHHHhChhhccccCceEEecCCcccccc
Confidence            1 0        0126789999999999987642  234 4455444444443

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.6e-21  Score=166.23  Aligned_cols=222  Identities=14%  Similarity=0.119  Sum_probs=149.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc-c-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK-L-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~-~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++||||+|+||++++++|+++|++|+++.++... . .... +.....++.++.+|++|.+++.++++       .+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999998877654322 1 1111 11112357889999999988877665       58


Q ss_pred             CEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhc------CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           81 DGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKS------ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        81 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      |+|||+|+...... ......++|  ...+++|+.++.++++++...      +...++|++||...+++.+.       
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------  152 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARL--TRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG-------  152 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC-------
Confidence            99999999754322 112222333  478999999999998887643      11247999999865543322       


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       ....|+.+|.+.|.+++.++++.   +++++++||+.++++........  ..+ ....+.  
T Consensus       153 -----------------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~--~~~-~~~~~~--  210 (248)
T PRK06123        153 -----------------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEP--GRV-DRVKAG--  210 (248)
T ss_pred             -----------------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCH--HHH-HHHHhc--
Confidence                             11249999999999999988764   89999999999999854321110  111 111111  


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--C-CceEEEec
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--A-QGQYICCV  274 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~  274 (348)
                       .+ .+.         +.+++|+++++.+++....  . +..|++.+
T Consensus       211 -~p-~~~---------~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        211 -IP-MGR---------GGTAEEVARAILWLLSDEASYTTGTFIDVSG  246 (248)
T ss_pred             -CC-CCC---------CcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence             11 112         3478999999999887542  2 34566543

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1e-20  Score=164.05  Aligned_cols=209  Identities=18%  Similarity=0.135  Sum_probs=148.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccc----cccCCCCCeEEEEccCCCcchHHHhhc----
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIF----SKWTRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      +++|+|+||||+|+||+++++.|+++|++|++++|.....  ...    .......++.++.+|+.|.+++.++++    
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999987643221  111    011122468899999999988877663    


Q ss_pred             ---CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh-----hcCCcceEEEeccceeeeecCCCCCC
Q 035965           79 ---GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL-----KSESVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                         ++|+|||+|+..........+.++|  ...+++|+.++.++++++.     +.+ .+++|++||...+++..     
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-----  155 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEW--DDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGNR-----  155 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCCC-----
Confidence               5899999999765433223323333  4678999999999999997     344 57899999977554321     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          +...|+.+|.+.+.+++.++++   .+++++++||+.++++.......  .   ......
T Consensus       156 --------------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~--~---~~~~~~  210 (249)
T PRK12827        156 --------------------GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAP--T---EHLLNP  210 (249)
T ss_pred             --------------------CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccch--H---HHHHhh
Confidence                                2346999999999999988766   37999999999999986443211  0   011111


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      .    +          ...+.+++|+++++..++...
T Consensus       211 ~----~----------~~~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        211 V----P----------VQRLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             C----C----------CcCCcCHHHHHHHHHHHcCcc
Confidence            0    0          011558899999999988654

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1e-20  Score=166.73  Aligned_cols=167  Identities=20%  Similarity=0.220  Sum_probs=126.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc--------CC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--------GC   80 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~   80 (348)
                      ++++|+||||+|+||+++++.|+++|++|++++|++.+. .+..     .+++++.+|++|.+++..+++        .+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-----EGLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----CCceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            357899999999999999999999999999999987644 2221     257889999999988766553        47


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHH----HHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQS----TLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||........+.+.+++  ...+++|+.|    +..+++.+++.+ .++||++||...+.+.            
T Consensus        78 d~li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~------------  142 (277)
T PRK05993         78 DALFNNGAYGQPGAVEDLPTEAL--RAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVPM------------  142 (277)
T ss_pred             cEEEECCCcCCCCCcccCCHHHH--HHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCCC------------
Confidence            99999998755443323322333  4689999999    556666666666 6799999997543211            


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCC
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPF  209 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~  209 (348)
                                   ++...|+.||.+.|.+++.++.+   .|+++++++||.+-.+.
T Consensus       143 -------------~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~  185 (277)
T PRK05993        143 -------------KYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF  185 (277)
T ss_pred             -------------CccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence                         03357999999999999887644   58999999999887664

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.87  E-value=9.9e-21  Score=164.15  Aligned_cols=222  Identities=18%  Similarity=0.078  Sum_probs=152.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +++|+|+||||+|+||.+++++|+++|++|++++|+..............++.++.+|+++.+++..+++       ++|
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999999999999999999999999999999865322111111112468899999999988876553       589


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+|+............++|  ...+++|+.++..+++++...    +..+++|++||...+.+..            
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------  148 (248)
T TIGR01832        83 ILVNNAGIIRRADAEEFSEKDW--DDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI------------  148 (248)
T ss_pred             EEEECCCCCCCCChhhCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC------------
Confidence            9999999754432222222233  467899999999999987642    2136899999986543221            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   ....|+.+|.+.+.+++.++++.   +++++.++||.|..+......... . .......   .++ 
T Consensus       149 -------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~-~~~~~~~---~~~-  209 (248)
T TIGR01832       149 -------------RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADE-D-RNAAILE---RIP-  209 (248)
T ss_pred             -------------CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccCh-H-HHHHHHh---cCC-
Confidence                         12359999999999999998874   799999999999877432110000 0 0000000   111 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEE
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYIC  272 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~  272 (348)
                               .+.|+..+|+|+++.+++....  ..|.++.
T Consensus       210 ---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  240 (248)
T TIGR01832       210 ---------AGRWGTPDDIGGPAVFLASSASDYVNGYTLA  240 (248)
T ss_pred             ---------CCCCcCHHHHHHHHHHHcCccccCcCCcEEE
Confidence                     1238899999999999997533  2455543

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.8e-21  Score=166.50  Aligned_cols=199  Identities=14%  Similarity=0.168  Sum_probs=144.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   82 (348)
                      +|+|+||||+|+||.++++.|+++|++|++++|++.+. ..........++.++.+|++|.+++.++++       .+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            57999999999999999999999999999999976543 222111111268899999999988877654       3799


Q ss_pred             EEEccccCccccccc-cccccchhhhhhhhhHHHHHHHHHH----HhhcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           83 VFHVAASMEFDINVK-DNIETYVQSTVINPAIQSTLNLLKA----CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        83 Vih~a~~~~~~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +||+||......... .+.++|  ...+++|+.++..+++.    +++.+ .++||++||...+.+.+            
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~~------------  146 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVF--REVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGLP------------  146 (257)
T ss_pred             EEECCCcCCCccccccCCHHHH--HHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCC------------
Confidence            999999754322111 222333  57899999999998874    44444 57899999977553322            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   ....|+.+|.+.+.+.+.++.+   ++++++.+||+.+.++.....                 ... 
T Consensus       147 -------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-----------------~~~-  195 (257)
T PRK07024        147 -------------GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-----------------PYP-  195 (257)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-----------------CCC-
Confidence                         1235999999999999887643   589999999999987642210                 000 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                        ...       ++..+|+++.++.++.+.
T Consensus       196 --~~~-------~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        196 --MPF-------LMDADRFAARAARAIARG  216 (257)
T ss_pred             --CCC-------ccCHHHHHHHHHHHHhCC
Confidence              001       457999999999999864

>PLN02253 xanthoxin dehydrogenase

Probab=99.87  E-value=1.2e-20  Score=166.53  Aligned_cols=174  Identities=17%  Similarity=0.094  Sum_probs=130.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|+++||||+|+||++++++|+++|++|++++|+.... ..........++.++.+|++|.+++.++++       ++
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i   95 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL   95 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4568899999999999999999999999999999875433 221111122468899999999998887765       58


Q ss_pred             CEEEEccccCccc--cccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           81 DGVFHVAASMEFD--INVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        81 d~Vih~a~~~~~~--~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      |+|||+||.....  .....+.++|  ...+++|+.++.++++++...   ....++|++||.....+..          
T Consensus        96 d~li~~Ag~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------  163 (280)
T PLN02253         96 DIMVNNAGLTGPPCPDIRNVELSEF--EKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL----------  163 (280)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHH--HHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC----------
Confidence            9999999975322  1112222333  578999999999999887642   1146899998876543221          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCC
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPF  209 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~  209 (348)
                                     ....|+.+|.+.|.+.+.++.+.   ++++..++|+.+..+.
T Consensus       164 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~  205 (280)
T PLN02253        164 ---------------GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL  205 (280)
T ss_pred             ---------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence                           12359999999999999988764   7999999999998764

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=7.8e-21  Score=163.85  Aligned_cols=204  Identities=16%  Similarity=0.131  Sum_probs=148.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++++++||||+|+||.+++++|+++|++|++++|++.+. ... .......++.++.+|+++++++.++++       +
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3457899999999999999999999999999999986543 211 111122368889999999998877765       6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+++........+...++|  ...++.|+.++.++++++..    .+ .+++|++||...+++..          
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~----------  151 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEW--EKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGAA----------  151 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCCC----------
Confidence            899999998754332222222333  47799999999999988764    33 57899999977544321          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.+|.+.+.+++.++.+   .+++++.+||+.+.++.....          ....     
T Consensus       152 ---------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~----------~~~~-----  201 (239)
T PRK07666        152 ---------------VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL----------GLTD-----  201 (239)
T ss_pred             ---------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc----------cccc-----
Confidence                           2346999999999998887754   589999999999887643210          0000     


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                        ..       ...++..+|+|+++..+++++
T Consensus       202 --~~-------~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        202 --GN-------PDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             --cC-------CCCCCCHHHHHHHHHHHHhCC
Confidence              00       112678999999999999876

>PRK05717 oxidoreductase; Validated

Probab=99.87  E-value=2e-20  Score=162.96  Aligned_cols=212  Identities=15%  Similarity=0.103  Sum_probs=148.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      ..++|+++||||+|+||+++++.|+++|++|++++|+..+. .....  ....+.++.+|++|.+++.++++       .
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   84 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKA--LGENAWFIAMDVADEAQVAAGVAEVLGQFGR   84 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH--cCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            34578999999999999999999999999999999876543 22111  12357889999999988765443       4


Q ss_pred             CCEEEEccccCccc--cccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFD--INVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~--~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+|+.....  .....+.++|  ...+++|+.++.++++++...  ....++|++||...+.+.+          
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~----------  152 (255)
T PRK05717         85 LDALVCNAAIADPHNTTLESLSLAHW--NRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP----------  152 (255)
T ss_pred             CCEEEECCCcccCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC----------
Confidence            79999999975432  1112222333  478999999999999999642  1136899999976543221          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                     ..+.|+.+|.+.+.+++.++++.  ++++..++|+.+.++.......   ..+......   ..+
T Consensus       153 ---------------~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~---~~~~~~~~~---~~~  211 (255)
T PRK05717        153 ---------------DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRA---EPLSEADHA---QHP  211 (255)
T ss_pred             ---------------CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccc---hHHHHHHhh---cCC
Confidence                           12369999999999999998875  4999999999999975322100   001000000   011


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                       .+         .+.+++|++.++.+++...
T Consensus       212 -~~---------~~~~~~~va~~~~~l~~~~  232 (255)
T PRK05717        212 -AG---------RVGTVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             -CC---------CCcCHHHHHHHHHHHcCch
Confidence             11         2668999999999888653

>PRK09186 flagellin modification protein A; Provisional

Probab=99.87  E-value=6.9e-21  Score=165.92  Aligned_cols=222  Identities=23%  Similarity=0.267  Sum_probs=146.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccccc-C--CCCCeEEEEccCCCcchHHHhhc-------
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKW-T--RSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~-~--~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      ++|+|+||||+|+||.++++.|+++|++|++++|++.+. ...... .  ....+.++.+|++|++++.++++       
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999976543 111110 0  11346677999999998877765       


Q ss_pred             CCCEEEEccccCccc---cccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCC
Q 035965           79 GCDGVFHVAASMEFD---INVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~---~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                      .+|+|||+|+.....   .....+.++|  ...+++|+.++..+++++.    +.+ .++||++||.+.++....     
T Consensus        83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~-----  154 (256)
T PRK09186         83 KIDGAVNCAYPRNKDYGKKFFDVSLDDF--NENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKF-----  154 (256)
T ss_pred             CccEEEECCccccccccCccccCCHHHH--HHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccc-----
Confidence            279999999753211   1112222222  4678888877776666554    345 579999999765443211     


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                       ...+..+..         ....|+.+|...+.+.+.++++   .++++++++|+.++++...    ..    .......
T Consensus       155 -~~~~~~~~~---------~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~----~~----~~~~~~~  216 (256)
T PRK09186        155 -EIYEGTSMT---------SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE----AF----LNAYKKC  216 (256)
T ss_pred             -hhccccccC---------CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH----HH----HHHHHhc
Confidence             111221110         2236999999999999888775   4799999999988765311    11    1111111


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC--CceE
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QGQY  270 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~~y  270 (348)
                      .   +   ...       +++++|+|+++++++.....  .|.+
T Consensus       217 ~---~---~~~-------~~~~~dva~~~~~l~~~~~~~~~g~~  247 (256)
T PRK09186        217 C---N---GKG-------MLDPDDICGTLVFLLSDQSKYITGQN  247 (256)
T ss_pred             C---C---ccC-------CCCHHHhhhhHhheeccccccccCce
Confidence            0   0   112       78999999999999976432  4544

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.1e-20  Score=163.93  Aligned_cols=214  Identities=21%  Similarity=0.213  Sum_probs=146.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++|+||||+|+||++++++|+++|++|++++|+.... .....  ...++.++.+|++|.+++..+++       ++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAE--LGESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH--hCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            4568999999999999999999999999999999875433 21111  12357889999999877655443       58


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      |+|||+|+..........+.++|  ...+++|+.++.++++++... ....++|++||....++.+              
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~--------------  145 (249)
T PRK06500         82 DAVFINAGVAKFAPLEDWDEAMF--DRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP--------------  145 (249)
T ss_pred             CEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC--------------
Confidence            99999998754332222222223  478999999999999999752 1135788888865443321              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCC--CCchHHHHHhhhcCCCCcccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSS--VPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                 ..+.|+.+|.+.|.+++.++.+.   +++++++||+.+++|.....  .......+.+......   + 
T Consensus       146 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---~-  210 (249)
T PRK06500        146 -----------NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALV---P-  210 (249)
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcC---C-
Confidence                       22469999999999998887653   89999999999999842210  0111111111111111   1 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      .+.         +..++|+++++.+++...
T Consensus       211 ~~~---------~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        211 LGR---------FGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             CCC---------CcCHHHHHHHHHHHcCcc
Confidence            111         458999999999988754

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.87  E-value=1.4e-20  Score=163.61  Aligned_cols=215  Identities=16%  Similarity=0.073  Sum_probs=149.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .+..|++|||||+|+||++++++|+++|++|++++|+...       ....++.++.+|++|.+++.++++       .+
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLT-------QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPL   77 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhh-------hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            3556899999999999999999999999999999997611       112368889999999998887765       37


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+++..........+.++|  ...+++|+.++..+++++..    .+ .++||++||.....+..           
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~~~-----------  143 (252)
T PRK08220         78 DVLVNAAGILRMGATDSLSDEDW--QQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVPRI-----------  143 (252)
T ss_pred             CEEEECCCcCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccCCC-----------
Confidence            99999999754433222222333  47899999999999998753    33 46899999975322111           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.+|...|.+++.++++   .++++++++|+.++++.......... .......+....+.
T Consensus       144 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~  208 (252)
T PRK08220        144 --------------GMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDED-GEQQVIAGFPEQFK  208 (252)
T ss_pred             --------------CCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchh-hhhhhhhhHHHHHh
Confidence                          2346999999999999998876   68999999999999985321100000 00000000000000


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                            .....+.+++++|+|+++++++...
T Consensus       209 ------~~~~~~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        209 ------LGIPLGKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             ------hcCCCcccCCHHHHHHHHHHHhcch
Confidence                  0012234889999999999988753

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.87  E-value=2.9e-20  Score=161.03  Aligned_cols=222  Identities=20%  Similarity=0.159  Sum_probs=150.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +.+++|+||||||+||+++++.|+++|++|+++.|+..+.  .... ......++.++.+|++|.+++.++++       
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4568999999999999999999999999998888865432  1111 11123468889999999988877654       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      ++|+|||+|+............+.+  +..+..|+.++.++++++...   ...+++|++||...+++..          
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~----------  150 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDW--DRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP----------  150 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC----------
Confidence            5899999999754432222222222  467889999999999888753   1256899999976444322          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     ....|+.+|.+.+.+++.++++   .++++++++|+.+.++......+.    +........   
T Consensus       151 ---------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~----~~~~~~~~~---  208 (248)
T PRK05557        151 ---------------GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPED----VKEAILAQI---  208 (248)
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChH----HHHHHHhcC---
Confidence                           2246999999999888887754   479999999998866543221111    111111100   


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC--CCCc-eEEEec
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND--RAQG-QYICCV  274 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~-~y~~~~  274 (348)
                                ..+.+.+++|+++++..++...  ...| .|++.+
T Consensus       209 ----------~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~  243 (248)
T PRK05557        209 ----------PLGRLGQPEEIASAVAFLASDEAAYITGQTLHVNG  243 (248)
T ss_pred             ----------CCCCCcCHHHHHHHHHHHcCcccCCccccEEEecC
Confidence                      1122679999999999888762  2234 466543

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=2.4e-20  Score=162.51  Aligned_cols=228  Identities=14%  Similarity=0.099  Sum_probs=158.1

Q ss_pred             CCCCCcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc
Q 035965            1 MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus         1 m~~~~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      |+-...+.+++|+|+||||+|+||++++++|+++|++|++++|+.... .... +.....++.++.+|++|.+++.++++
T Consensus         1 ~~~~~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   80 (256)
T PRK06124          1 MSILQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFA   80 (256)
T ss_pred             CCcccccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            444455667789999999999999999999999999999999986533 2111 11123458899999999988877664


Q ss_pred             -------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCC
Q 035965           79 -------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSS  147 (348)
Q Consensus        79 -------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~  147 (348)
                             .+|+|||+++............++|  +..+++|+.++..+.+++.+    .+ .+++|++||.....+.+  
T Consensus        81 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~--  155 (256)
T PRK06124         81 RIDAEHGRLDILVNNVGARDRRPLAELDDAAI--RALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVARA--  155 (256)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCCC--
Confidence                   4699999999754433222323333  46799999999999977754    44 67899999976433221  


Q ss_pred             CCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhh
Q 035965          148 GEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSP  224 (348)
Q Consensus       148 ~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  224 (348)
                                             ....|+.+|.+.+.+++.++.+   .++++..++|+.+.++........  ..+...
T Consensus       156 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~--~~~~~~  210 (256)
T PRK06124        156 -----------------------GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAAD--PAVGPW  210 (256)
T ss_pred             -----------------------CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccC--hHHHHH
Confidence                                   1246999999999999888765   379999999999998853321100  001111


Q ss_pred             hcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC--CceEE
Q 035965          225 ITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QGQYI  271 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~~y~  271 (348)
                      ....   .+ .         ..+++++|+++++++++..+..  .|.++
T Consensus       211 ~~~~---~~-~---------~~~~~~~~~a~~~~~l~~~~~~~~~G~~i  246 (256)
T PRK06124        211 LAQR---TP-L---------GRWGRPEEIAGAAVFLASPAASYVNGHVL  246 (256)
T ss_pred             HHhc---CC-C---------CCCCCHHHHHHHHHHHcCcccCCcCCCEE
Confidence            1111   11 1         1278999999999999987533  45553

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.87  E-value=2.4e-20  Score=153.71  Aligned_cols=211  Identities=18%  Similarity=0.187  Sum_probs=157.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      ..|.++|||||+.||.++++.|.+.|++|+++.|+.++. .+...... ..+.++..|++|.+++..+++       ++|
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-GAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-CceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            357899999999999999999999999999999988755 33222211 468899999999988655543       689


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ++|||||........+...++|  ..++++|+.|..+..++..    +.+ ..++|.+||.+..+..+.           
T Consensus        84 iLvNNAGl~~g~~~~~~~~~dw--~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y~~-----------  149 (246)
T COG4221          84 ILVNNAGLALGDPLDEADLDDW--DRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPYPG-----------  149 (246)
T ss_pred             EEEecCCCCcCChhhhCCHHHH--HHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccCCC-----------
Confidence            9999999877666566777778  6899999999999988775    334 569999999876544333           


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc-
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS-  233 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-  233 (348)
                                    .+.|+.+|+....+.+...++   .+++++.+-||.+-.........          .|...... 
T Consensus       150 --------------~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~----------~g~~~~~~~  205 (246)
T COG4221         150 --------------GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRF----------EGDDERADK  205 (246)
T ss_pred             --------------CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccC----------CchhhhHHH
Confidence                          347999999999998888776   37999999999886543222100          01000110 


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDRA  266 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~  266 (348)
                      .+..       ...+..+|+|+++.++++.|..
T Consensus       206 ~y~~-------~~~l~p~dIA~~V~~~~~~P~~  231 (246)
T COG4221         206 VYKG-------GTALTPEDIAEAVLFAATQPQH  231 (246)
T ss_pred             Hhcc-------CCCCCHHHHHHHHHHHHhCCCc
Confidence            0111       2288999999999999999865

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.4e-20  Score=164.74  Aligned_cols=211  Identities=16%  Similarity=0.134  Sum_probs=148.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +++||||||+|+||+++++.|+++|++|++++|++.+. ... .+.....++.++.+|+.|.+++..+++       ++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            46899999999999999999999999999999986543 111 111123468889999999988877665       589


Q ss_pred             EEEEccccCcccccccc-ccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           82 GVFHVAASMEFDINVKD-NIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      +|||+|+.......... ..+++  ...+++|+.++.++++.+...  ...+++|++||...+.+..             
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------  145 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVF--ERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVP-------------  145 (263)
T ss_pred             EEEECCCcccccchhccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCC-------------
Confidence            99999987554322111 22222  467899999999999988532  1147899999977553221             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                                  +...|+.+|...|.+++.++.+   .+++++.++|+.+..+.......         ..+.....   
T Consensus       146 ------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~---------~~~~~~~~---  201 (263)
T PRK06181        146 ------------TRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALD---------GDGKPLGK---  201 (263)
T ss_pred             ------------CccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcc---------cccccccc---
Confidence                        2346999999999998887654   47999999999988764321100         00111000   


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                          .+.+.+++++++|+|+++..+++..
T Consensus       202 ----~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        202 ----SPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             ----ccccccCCCCHHHHHHHHHHHhhCC
Confidence                1112345899999999999999853

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3e-20  Score=161.26  Aligned_cols=213  Identities=21%  Similarity=0.173  Sum_probs=149.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +..++++||||+|+||++|++.|+++|++|++++|++.+. .... ......++.++.+|++|.+++.++++       +
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3468999999999999999999999999999999876543 2211 11122468899999999998877663       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC---CcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE---SVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      +|+|||+++............++|  ...++.|+.++.++++++...-   ..+++|++||...+.+..           
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  151 (250)
T PRK12939         85 LDGLVNNAGITNSKSATELDIDTW--DAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP-----------  151 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC-----------
Confidence            899999999754432222222222  4678899999999998876431   145999999976443221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    ....|+.+|.+.|.+++.++.+   .+++++.++|+.+..+..........  .......      
T Consensus       152 --------------~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~------  209 (250)
T PRK12939        152 --------------KLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADER--HAYYLKG------  209 (250)
T ss_pred             --------------CcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHH--HHHHHhc------
Confidence                          2236999999999999988765   47999999999887765332111000  0011101      


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                              ...+.+++++|++++++.++...
T Consensus       210 --------~~~~~~~~~~dva~~~~~l~~~~  232 (250)
T PRK12939        210 --------RALERLQVPDDVAGAVLFLLSDA  232 (250)
T ss_pred             --------CCCCCCCCHHHHHHHHHHHhCcc
Confidence                    02233789999999999999864

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.86  E-value=1.1e-20  Score=163.58  Aligned_cols=212  Identities=15%  Similarity=0.084  Sum_probs=142.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEE-cCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATV-RDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~-r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      |++++||||+|+||++++++|+++|++|+++. |+..+. .... ......++.++.+|++|.+++.++++       .+
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999998754 544322 1111 11112357889999999998877665       46


Q ss_pred             CEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhc------CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           81 DGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKS------ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        81 d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      |+|||+|+...... ......++|  ...+++|+.++..+++++...      +...+||++||...+++.+.       
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~-------  151 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERI--NRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG-------  151 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC-------
Confidence            89999999653322 112222222  477999999998887766542      12357999999865543221       


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       ....|+.+|...|.+++.++.+   .+++++++||+.+|+|.......  ...+......   
T Consensus       152 -----------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~--~~~~~~~~~~---  209 (247)
T PRK09730        152 -----------------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE--PGRVDRVKSN---  209 (247)
T ss_pred             -----------------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC--HHHHHHHHhc---
Confidence                             1135999999999998887654   48999999999999996432211  1111111111   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                       .+ .+.         ..+++|+++++.+++...
T Consensus       210 -~~-~~~---------~~~~~dva~~~~~~~~~~  232 (247)
T PRK09730        210 -IP-MQR---------GGQPEEVAQAIVWLLSDK  232 (247)
T ss_pred             -CC-CCC---------CcCHHHHHHHHHhhcChh
Confidence             11 111         237899999999988754

>PRK06128 oxidoreductase; Provisional

Probab=99.86  E-value=4.2e-20  Score=164.66  Aligned_cols=225  Identities=12%  Similarity=0.091  Sum_probs=153.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---cccc-ccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +++|+||||||+|+||++++++|+++|++|+++.++....   .... +.....++.++.+|++|.+++.++++      
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            3468999999999999999999999999998887754321   1111 11112357789999999988877654      


Q ss_pred             -CCCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           79 -GCDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                       ++|+|||+|+...... ..+.+.++|  ...+++|+.++..+++++... ....+||++||...+.+..          
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  200 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQF--DATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP----------  200 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC----------
Confidence             5899999999643221 112223333  578999999999999999753 1135899999987553221          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     ....|+.+|.+.+.+++.++++   .|+++..++||.|.++....... .-..+ ..+.. ..  
T Consensus       201 ---------------~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~-~~~~~-~~~~~-~~--  260 (300)
T PRK06128        201 ---------------TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQ-PPEKI-PDFGS-ET--  260 (300)
T ss_pred             ---------------CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCC-CHHHH-HHHhc-CC--
Confidence                           2235999999999999998876   58999999999999986432100 00111 11111 11  


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  275 (348)
                      +          .+.+.+.+|++.++++++.....   +..|++.+.
T Consensus       261 p----------~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg  296 (300)
T PRK06128        261 P----------MKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGG  296 (300)
T ss_pred             C----------CCCCcCHHHHHHHHHHHhCccccCccCcEEeeCCC
Confidence            1          12266899999999998875432   335666543

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.86  E-value=6e-20  Score=162.66  Aligned_cols=223  Identities=17%  Similarity=0.088  Sum_probs=154.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+||||||+|+||++++++|+++|++|++++|+..+.  .... ......++.++.+|++|.+++.++++       
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4468999999999999999999999999999999875422  1111 11122467889999999988877664       


Q ss_pred             CCCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           79 GCDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      .+|+|||+|+...... ..+.+.++|  ...++.|+.++.++++++... ....++|++||...+.+...          
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~----------  191 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQL--DKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET----------  191 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC----------
Confidence            5799999999743322 112222333  478999999999999998763 21368999999876543222          


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                     ...|+.+|.+.+.+++.++.+.   +++++.++|+.++.+.......  ...+...  +.  .  
T Consensus       192 ---------------~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~--~~~~~~~--~~--~--  248 (290)
T PRK06701        192 ---------------LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD--EEKVSQF--GS--N--  248 (290)
T ss_pred             ---------------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC--HHHHHHH--Hh--c--
Confidence                           1359999999999999998874   8999999999999875332111  0001000  00  0  


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCV  274 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  274 (348)
                              ...+.+.+++|+|+++++++....  ..| .+++.+
T Consensus       249 --------~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idg  284 (290)
T PRK06701        249 --------TPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNG  284 (290)
T ss_pred             --------CCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence                    012347899999999999988653  234 445443

>PRK08643 acetoin reductase; Validated

Probab=99.86  E-value=2.4e-20  Score=162.50  Aligned_cols=172  Identities=18%  Similarity=0.116  Sum_probs=127.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +|+++||||+|+||+++++.|+++|++|++++|+..+. .... ......++.++.+|++|++++.++++       ++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999999999999999976543 2211 11122467889999999988777654       589


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+|+........+...++|  ...+++|+.++..+++.+..    .+...++|++||...+++.+            
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------  147 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQF--DKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP------------  147 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC------------
Confidence            9999998754332222222333  47789999998877777653    22236899999976543321            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCC
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPF  209 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~  209 (348)
                                   ....|+.+|.+.+.+++.++.+   .|++++.++|+.+.++.
T Consensus       148 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  189 (256)
T PRK08643        148 -------------ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM  189 (256)
T ss_pred             -------------CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence                         1246999999999999988865   47999999999998764

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.9e-20  Score=161.62  Aligned_cols=205  Identities=15%  Similarity=0.142  Sum_probs=146.7

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +|++++||||+|+||.+++++|+++|++|++++|++.+. .... ......++.++.+|++|.+++.++++       .+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            467999999999999999999999999999999976543 2211 11112468889999999988877654       48


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+|+..........+.++|  ...+++|+.++.++++.+.    +.+ .+++|++||...+.+..           
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-----------  150 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSDW--QWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAFP-----------  150 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHHH--HHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCCC-----------
Confidence            99999999754332222222333  4678899999888887764    333 57899999987543211           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.+|.+.+.+.+.++++   .+++++++||+.+-.+.....  ..           .... 
T Consensus       151 --------------~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~--~~-----------~~~~-  202 (241)
T PRK07454        151 --------------QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE--TV-----------QADF-  202 (241)
T ss_pred             --------------CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc--cc-----------cccc-
Confidence                          2346999999999998887654   489999999999877642210  00           0000 


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                        ....       ++..+|+|++++.++..+.
T Consensus       203 --~~~~-------~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        203 --DRSA-------MLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             --cccc-------CCCHHHHHHHHHHHHcCCc
Confidence              0111       5789999999999998774

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.86  E-value=3.3e-20  Score=167.97  Aligned_cols=266  Identities=17%  Similarity=0.169  Sum_probs=181.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC---CeEEEEEcCCCcc----cccc-------------ccCCCCCeEEEEccCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG---YIVHATVRDPGKL----QIFS-------------KWTRSDRLRLFQADLQV   69 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g---~~V~~~~r~~~~~----~~~~-------------~~~~~~~~~~~~~Dl~d   69 (348)
                      +.|+|+|||||||+|.-|++.|+..-   .+++.+-|.....    ++..             .+...+++..+.||+.+
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            57899999999999999999999763   3678888854321    1110             11123678899999986


Q ss_pred             c------chHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeee
Q 035965           70 E------GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITA  143 (348)
Q Consensus        70 ~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~  143 (348)
                      +      .+++.+.+++|+|||+||...++.         +....+..|..||+++++.|++....+-++|+||+++. .
T Consensus        91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde---------~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~  160 (467)
T KOG1221|consen   91 PDLGISESDLRTLADEVNIVIHSAATVRFDE---------PLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-C  160 (467)
T ss_pred             cccCCChHHHHHHHhcCCEEEEeeeeeccch---------hhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-c
Confidence            5      345556778999999999988877         66688999999999999999999879999999998765 2


Q ss_pred             cCC-CCCCCCcccCCC------------CCCcchhh----c-cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCcc
Q 035965          144 KDS-SGEWRPVVDESC------------QTPIHHVW----N-KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTV  205 (348)
Q Consensus       144 ~~~-~~~~~~~~~E~~------------~~~~~~~~----~-~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v  205 (348)
                      ... ..  +.++.+..            +.+.+...    . .....+.|..+|..+|.++...++  +++++|+||+.|
T Consensus       161 ~~~~i~--E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~--~lPivIiRPsiI  236 (467)
T KOG1221|consen  161 NVGHIE--EKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE--NLPLVIIRPSII  236 (467)
T ss_pred             cccccc--ccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc--CCCeEEEcCCce
Confidence            211 11  11222111            11111111    1 123457799999999999999755  799999999999


Q ss_pred             ccCCCCCCCCchHHHHHhhhcCCCCccccccc------cccCCCCcceeeHHHHHHHHHHhhcC--CCC----CceEEEe
Q 035965          206 AGPFLTSSVPSSIQVLLSPITGDSKFFSILSS------VSNRMGSIALVHIEDICNAHIFLMEN--DRA----QGQYICC  273 (348)
Q Consensus       206 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~r~~i~v~D~a~~~~~~~~~--~~~----~~~y~~~  273 (348)
                      ......+. +.|+..+    +|-...+-..|+      ....+..-|+|.+|.++.+++.+.-.  ...    -.+|+++
T Consensus       237 ~st~~EP~-pGWidn~----~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~t  311 (467)
T KOG1221|consen  237 TSTYKEPF-PGWIDNL----NGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLT  311 (467)
T ss_pred             eccccCCC-CCccccC----CCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEec
Confidence            99877663 3333211    111111111111      12334678899999999999976521  111    2278875


Q ss_pred             -cc--CcChHHHHHHHHHhCCCCC
Q 035965          274 -VK--SCPISEFIDHLKLEYPSSK  294 (348)
Q Consensus       274 -~~--~~s~~el~~~i~~~~~~~~  294 (348)
                       ++  ++++.++.+.........|
T Consensus       312 ss~~Np~t~~~~~e~~~~~~~~~P  335 (467)
T KOG1221|consen  312 SSNDNPVTWGDFIELALRYFEKIP  335 (467)
T ss_pred             ccccCcccHHHHHHHHHHhcccCC
Confidence             33  9999999999999875433

>PRK08264 short chain dehydrogenase; Validated

Probab=99.86  E-value=4.4e-20  Score=159.04  Aligned_cols=168  Identities=20%  Similarity=0.141  Sum_probs=129.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGVF   84 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~Vi   84 (348)
                      ++.++|+||||+|+||++++++|+++|+ +|++++|+..+...     ...++.++.+|+.|.+++.++++   .+|+||
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   78 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-----LGPRVVPLQLDVTDPASVAAAAEAASDVTILV   78 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            4457999999999999999999999998 99999998754411     12468899999999999888776   489999


Q ss_pred             Ecccc-CccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           85 HVAAS-MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        85 h~a~~-~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      |+|+. ...........++|  ...+++|+.++.++++++.+    .+ .+++|++||...+.+..              
T Consensus        79 ~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~--------------  141 (238)
T PRK08264         79 NNAGIFRTGSLLLEGDEDAL--RAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNFP--------------  141 (238)
T ss_pred             ECCCcCCCCCccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCCC--------------
Confidence            99997 33222222222223  46788999999999998753    34 57899999976543211              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCC
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPF  209 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~  209 (348)
                                 +...|+.+|.+.|.+.+.++++.   +++++++||+.+.++.
T Consensus       142 -----------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        142 -----------NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             -----------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence                       33579999999999999887663   8999999999987764

>PRK06196 oxidoreductase; Provisional

Probab=99.86  E-value=5.2e-20  Score=165.19  Aligned_cols=225  Identities=16%  Similarity=0.090  Sum_probs=146.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++++|+||||+|+||.+++++|+++|++|++++|+..+. .....   ..++.++.+|++|.+++.++++       +
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~---l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~   99 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAG---IDGVEVVMLDLADLESVRAFAERFLDSGRR   99 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hhhCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            34568999999999999999999999999999999986544 22111   1247889999999988877653       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+||......  ....++|  +..+++|+.++..+++.+    ++.+ ..++|++||........       ..+
T Consensus       100 iD~li~nAg~~~~~~--~~~~~~~--~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~-------~~~  167 (315)
T PRK06196        100 IDILINNAGVMACPE--TRVGDGW--EAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPI-------RWD  167 (315)
T ss_pred             CCEEEECCCCCCCCC--ccCCccH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCC-------Ccc
Confidence            899999999754322  2222223  477899999976666644    3444 47999999975332111       111


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                      +..+..      ...+...|+.||.+.+.+.+.++++   .++++++++||.+.++..... ................++
T Consensus       168 ~~~~~~------~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~  240 (315)
T PRK06196        168 DPHFTR------GYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHL-PREEQVALGWVDEHGNPI  240 (315)
T ss_pred             ccCccC------CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccC-Chhhhhhhhhhhhhhhhh
Confidence            111000      0114467999999999998888765   479999999999999854321 100000000000000000


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                      .  .         .+..++|+|..+++++..+.
T Consensus       241 ~--~---------~~~~~~~~a~~~~~l~~~~~  262 (315)
T PRK06196        241 D--P---------GFKTPAQGAATQVWAATSPQ  262 (315)
T ss_pred             h--h---------hcCCHhHHHHHHHHHhcCCc
Confidence            0  0         14578999999999887543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=6.8e-20  Score=159.58  Aligned_cols=223  Identities=17%  Similarity=0.109  Sum_probs=147.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|+++||||+|+||++++++|+++|++|+++.++..+. .....    .++.++.+|++|.+++.++++       +
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE----KGVFTIKCDVGNRDQVKKSKEVVEKEFGR   79 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh----CCCeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            34568999999999999999999999999999887754432 11111    147889999999998877664       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHH----HhhcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA----CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+|+..........+.++|  ...+++|+.++..+++.    +++.+ .+++|++||...++....         
T Consensus        80 id~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~---------  147 (255)
T PRK06463         80 VDVLVNNAGIMYLMPFEEFDEEKY--NKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAAE---------  147 (255)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHH--HHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCCC---------
Confidence            899999999754322222223333  47899999996655544    44344 579999999765421111         


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCC-CchHHHHHhhhcCCCCc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSV-PSSIQVLLSPITGDSKF  231 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~  231 (348)
                                     ....|+.+|.+.+.+++.++.+   .++++..++|+.+-.+...... +.....+........  
T Consensus       148 ---------------~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--  210 (255)
T PRK06463        148 ---------------GTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT--  210 (255)
T ss_pred             ---------------CccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC--
Confidence                           2346999999999999999876   4799999999988655321100 000000111111110  


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                                 ..+.+..++|+++++++++....  ..|. +.+.+
T Consensus       211 -----------~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg  245 (255)
T PRK06463        211 -----------VLKTTGKPEDIANIVLFLASDDARYITGQVIVADG  245 (255)
T ss_pred             -----------CcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence                       12225689999999999987643  2343 44443

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.86  E-value=8.8e-20  Score=159.14  Aligned_cols=220  Identities=17%  Similarity=0.108  Sum_probs=149.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .++|++|||||+|+||+++++.|+++|++|+++.+...+.  .... ......++.++.+|++|.+++.++++       
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3467999999999999999999999999998887753221  1111 11112468889999999988877664       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC---CcceEEEeccceeeeecCCCCCCCCccc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE---SVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      .+|+|||+|+........+...++|  ...+++|+.++..+++++....   ..+++|++||...+...+          
T Consensus        87 ~iD~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p----------  154 (258)
T PRK09134         87 PITLLVNNASLFEYDSAASFTRASW--DRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP----------  154 (258)
T ss_pred             CCCEEEECCcCCCCCccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC----------
Confidence            4799999999754432222222333  4789999999999999887532   135788887754321110          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                     ....|+.+|.+.|.+.+.++++.  +++++.++|+.++......     ...+.......    +
T Consensus       155 ---------------~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~-----~~~~~~~~~~~----~  210 (258)
T PRK09134        155 ---------------DFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS-----PEDFARQHAAT----P  210 (258)
T ss_pred             ---------------CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC-----hHHHHHHHhcC----C
Confidence                           22469999999999999988764  4899999999887653211     11111211111    1


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCCCCce-EEEec
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQ-YICCV  274 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~-y~~~~  274 (348)
                       .+.         ..+++|+|++++.+++++...+. |++.+
T Consensus       211 -~~~---------~~~~~d~a~~~~~~~~~~~~~g~~~~i~g  242 (258)
T PRK09134        211 -LGR---------GSTPEEIAAAVRYLLDAPSVTGQMIAVDG  242 (258)
T ss_pred             -CCC---------CcCHHHHHHHHHHHhcCCCcCCCEEEECC
Confidence             111         45799999999999998766554 55543

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.86  E-value=7.5e-20  Score=159.30  Aligned_cols=217  Identities=17%  Similarity=0.121  Sum_probs=151.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +++++||||||+|+||+++++.|+++|++|++++|+.......... ....+.++.+|+++.+++.++++       ++|
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   91 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQL-LGGNAKGLVCDVSDSQSVEAAVAAVISAFGRID   91 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-hCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            4568999999999999999999999999999999976532111111 12356789999999988877654       579


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+|+............++|  ...+++|+.++.++++++...    + .++||++||.....+.+            
T Consensus        92 ~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~------------  156 (255)
T PRK06841         92 ILVNSAGVALLAPAEDVSEEDW--DKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVALE------------  156 (255)
T ss_pred             EEEECCCCCCCCChhhCCHHHH--HHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCCC------------
Confidence            9999999754332222222223  468999999999999988642    3 57999999976543221            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   ....|+.+|.+.+.+.+.++++   .++++..++|+.+..+.........  .......    .++ 
T Consensus       157 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~----~~~-  216 (255)
T PRK06841        157 -------------RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGE--KGERAKK----LIP-  216 (255)
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchh--HHHHHHh----cCC-
Confidence                         1236999999999999998876   4799999999999876432110000  0001100    111 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCCC--CceE
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QGQY  270 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~~y  270 (348)
                               .+.+.+++|+++++++++.....  .|..
T Consensus       217 ---------~~~~~~~~~va~~~~~l~~~~~~~~~G~~  245 (255)
T PRK06841        217 ---------AGRFAYPEEIAAAALFLASDAAAMITGEN  245 (255)
T ss_pred             ---------CCCCcCHHHHHHHHHHHcCccccCccCCE
Confidence                     22377999999999999976432  4544

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.86  E-value=3.1e-20  Score=167.18  Aligned_cols=198  Identities=20%  Similarity=0.139  Sum_probs=132.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++++|+||||+|+||.++++.|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       .
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999999976543 2111 11112368899999999998877664       3


Q ss_pred             CCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhc----CC-cceEEEeccceeeeecCCCCCCCCc
Q 035965           80 CDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ES-VKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      +|+|||+||...... ....+.++|  +..+++|+.++.++++++...    +. ..|||++||...++...... ...+
T Consensus        84 iD~li~nAg~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~-~~~~  160 (322)
T PRK07453         84 LDALVCNAAVYMPLLKEPLRSPQGY--ELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGK-IPIP  160 (322)
T ss_pred             ccEEEECCcccCCCCCCCCCCHHHH--HHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCc-cCCC
Confidence            899999999753321 112222233  478999999999998887642    21 25999999987544211100 0001


Q ss_pred             c--cCCCCC--------Ccchh-hccCCCcchhHhhHHHHHHHHHHHHHhC----CCcEEEEecCccccCC
Q 035965          154 V--DESCQT--------PIHHV-WNKKASGWVYVLSKLLSEETAFKFANEN----KIDLVSVITTTVAGPF  209 (348)
Q Consensus       154 ~--~E~~~~--------~~~~~-~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~v~G~~  209 (348)
                      .  +..+..        +.... .....|...|+.||++.+.+.+.+++++    +++++.+|||+|++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence            0  100000        00000 0011255789999999988888887764    7999999999998754

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.2e-19  Score=156.01  Aligned_cols=203  Identities=19%  Similarity=0.148  Sum_probs=142.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc------CCCEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM------GCDGV   83 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~V   83 (348)
                      ..|+|+||||+|+||++++++|+++|++|++++|+..+.    .     ..+++.+|++|.+++.++++      ++|+|
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~v   72 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----F-----PGELFACDLADIEQTAATLAQINEIHPVDAI   72 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----c-----CceEEEeeCCCHHHHHHHHHHHHHhCCCcEE
Confidence            357899999999999999999999999999999976531    0     13578999999988877665      58999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ||+|+..........+.++|  ...++.|+.++.++++++.    +.+ .+++|++||...+ +..              
T Consensus        73 i~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~-~~~--------------  134 (234)
T PRK07577         73 VNNVGIALPQPLGKIDLAAL--QDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIF-GAL--------------  134 (234)
T ss_pred             EECCCCCCCCChHHCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccccc-CCC--------------
Confidence            99999765433222222333  4678899999888877664    344 6799999997632 111              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                 ....|+.+|...|.+++.++++   ++++++.+||+.+..+......+............    .+ .+
T Consensus       135 -----------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~----~~-~~  198 (234)
T PRK07577        135 -----------DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLAS----IP-MR  198 (234)
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhc----CC-CC
Confidence                       2246999999999999887765   48999999999998764321111000000011111    11 11


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      .         +...+|++.+++.++..+
T Consensus       199 ~---------~~~~~~~a~~~~~l~~~~  217 (234)
T PRK07577        199 R---------LGTPEEVAAAIAFLLSDD  217 (234)
T ss_pred             C---------CcCHHHHHHHHHHHhCcc
Confidence            1         447899999999999765

>PRK06398 aldose dehydrogenase; Validated

Probab=99.85  E-value=1.4e-19  Score=157.73  Aligned_cols=164  Identities=18%  Similarity=0.170  Sum_probs=128.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..+.         ..+.++.+|++|++++.++++       .+|
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~---------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   74 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY---------NDVDYFKVDVSNKEQVIKGIDYVISKYGRID   74 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc---------CceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4568999999999999999999999999999999976431         257889999999988877664       589


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      +|||+||............++|  ...+++|+.++..+++++...   ...+++|++||...+.+.+             
T Consensus        75 ~li~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------  139 (258)
T PRK06398         75 ILVNNAGIESYGAIHAVEEDEW--DRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTR-------------  139 (258)
T ss_pred             EEEECCCCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCC-------------
Confidence            9999999754433333333444  577899999999998887542   1257999999976442211             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccC
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGP  208 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~  208 (348)
                                  +...|+.+|.+.+.+.+.++.+.  ++++..++||.+-.+
T Consensus       140 ------------~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~  179 (258)
T PRK06398        140 ------------NAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTP  179 (258)
T ss_pred             ------------CCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence                        33469999999999999998774  399999999988665

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.4e-19  Score=157.41  Aligned_cols=215  Identities=16%  Similarity=0.114  Sum_probs=149.6

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .+++|+++||||+|+||++++++|+++|++|++++|+..+.      ....++.++.+|+.|.+++.++++       .+
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   76 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET------VDGRPAEFHAADVRDPDQVAALVDAIVERHGRL   76 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh------hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            34578999999999999999999999999999999976431      012367889999999988877664       46


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||............++|  +..+++|+.++..+++++..    .+...+||++||...+.+.+           
T Consensus        77 d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------  143 (252)
T PRK07856         77 DVLVNNAGGSPYALAAEASPRFH--EKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP-----------  143 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC-----------
Confidence            99999999654332222222333  47899999999999998764    12246899999976443211           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                    ....|+.+|.+.|.+++.++.+.  .+++..++|+.+..+........ ....... ..   ..+ 
T Consensus       144 --------------~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~-~~---~~~-  203 (252)
T PRK07856        144 --------------GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD-AEGIAAV-AA---TVP-  203 (252)
T ss_pred             --------------CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccC-HHHHHHH-hh---cCC-
Confidence                          23469999999999999998864  38999999999877643211000 0001011 11   111 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY  270 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y  270 (348)
                      .++         +..++|+++++++++....  ..|..
T Consensus       204 ~~~---------~~~p~~va~~~~~L~~~~~~~i~G~~  232 (252)
T PRK07856        204 LGR---------LATPADIAWACLFLASDLASYVSGAN  232 (252)
T ss_pred             CCC---------CcCHHHHHHHHHHHcCcccCCccCCE
Confidence            122         5589999999999887542  35544

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.4e-20  Score=161.60  Aligned_cols=169  Identities=22%  Similarity=0.160  Sum_probs=124.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cCCCCCeEEEEccCCCcchHHHhhc-CCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM-GCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~Vih~a   87 (348)
                      +++||||||+|+||++++++|+++|++|++++|++.+. .+... .....++.++.+|++|.+++..++. ++|+|||+|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            57899999999999999999999999999999976533 22111 1122358889999999999988876 799999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      +............+++  ...+++|+.++..+++.+    .+.+ .++||++||...+.+.+                  
T Consensus        82 g~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~~------------------  140 (257)
T PRK09291         82 GIGEAGAVVDIPVELV--RELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITGP------------------  140 (257)
T ss_pred             CcCCCcCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCCC------------------
Confidence            9754433223322323  367888998877766544    4445 57999999975332111                  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCcccc
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAG  207 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G  207 (348)
                             ....|+.+|.+.|.+++.++++   .+++++++||+.+..
T Consensus       141 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t  180 (257)
T PRK09291        141 -------FTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLT  180 (257)
T ss_pred             -------CcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence                   2246999999999988887654   589999999997643

>PRK08017 oxidoreductase; Provisional

Probab=99.85  E-value=2.9e-20  Score=161.93  Aligned_cols=208  Identities=20%  Similarity=0.166  Sum_probs=142.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc--------CCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--------GCD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~d   81 (348)
                      +++|+||||+|+||.++++.|+++|++|++++|+..+. ....     .+++++.+|+.|.+++..+++        .+|
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-----LGFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            46899999999999999999999999999999987544 2211     247889999999877655442        468


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHH----HHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNL----LKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      .++|+++..........+.+++  ...++.|+.++.++    ++.+++.+ .+++|++||...+.+..            
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~--~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~------------  141 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQM--EQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLISTP------------  141 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCCC------------
Confidence            9999998644322112222222  47889999988876    55555566 67899999975332111            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHH---hCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC-CCccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFAN---ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD-SKFFS  233 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~  233 (348)
                                   ....|+.+|...|.+.+.++.   ..+++++++||+.+..+....           ...+. ...+.
T Consensus       142 -------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-----------~~~~~~~~~~~  197 (256)
T PRK08017        142 -------------GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDN-----------VNQTQSDKPVE  197 (256)
T ss_pred             -------------CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhc-----------ccchhhccchh
Confidence                         234699999999988776533   358999999998765442211           00010 01111


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCCCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQ  267 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~  267 (348)
                        .   .+...|.+++++|+++++..+++++...
T Consensus       198 --~---~~~~~~~~~~~~d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        198 --N---PGIAARFTLGPEAVVPKLRHALESPKPK  226 (256)
T ss_pred             --h---hHHHhhcCCCHHHHHHHHHHHHhCCCCC
Confidence              0   1123456899999999999999877543

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=5.3e-20  Score=159.35  Aligned_cols=217  Identities=19%  Similarity=0.166  Sum_probs=149.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEE-EcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHAT-VRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~-~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++++|+||||+|+||.+++++|+++|++|+++ +|+..+. .... ......++.++.+|++|++++.++++       
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999998 8875433 1111 11122458899999999998877665       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|+|||+++..........+.+++  +..+++|+.++.++++.+..    .+ .+++|++||...+++...        
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~--------  151 (247)
T PRK05565         83 KIDILVNNAGISNFGLVTDMTDEEW--DRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGASC--------  151 (247)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCCCC--------
Confidence            6899999999763322122222222  47889999998888887764    33 568999999875543222        


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                       ...|+.+|.+.+.+++.++++   .+++++.+||+.+..+......+....   ....    .
T Consensus       152 -----------------~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~---~~~~----~  207 (247)
T PRK05565        152 -----------------EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKE---GLAE----E  207 (247)
T ss_pred             -----------------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHH---HHHh----c
Confidence                             236999999999888887765   489999999999876643321111110   0000    0


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY  270 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y  270 (348)
                      .          ..+.+...+|+++++..++....  ..|.+
T Consensus       208 ~----------~~~~~~~~~~va~~~~~l~~~~~~~~~g~~  238 (247)
T PRK05565        208 I----------PLGRLGKPEEIAKVVLFLASDDASYITGQI  238 (247)
T ss_pred             C----------CCCCCCCHHHHHHHHHHHcCCccCCccCcE
Confidence            0          11226789999999999987643  24544

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.85  E-value=9.2e-20  Score=159.45  Aligned_cols=215  Identities=16%  Similarity=0.092  Sum_probs=148.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+.++++|||||+|+||.+++++|+++|++|++++|++.+. .... ......++.++.+|++|.+++.++++       
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45678999999999999999999999999999999986543 2111 11112468889999999998876654       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|+|||+|+........+...++|  ...+++|+.++.++++++..    ....+++|++||.....+..         
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------  155 (263)
T PRK07814         87 RLDIVVNNVGGTMPNPLLSTSTKDL--ADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGR---------  155 (263)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH--HHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCC---------
Confidence            6899999998654333223323333  57899999999999999864    12257899999975432111         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                      +...|+.+|.+.+.+++.++.+.  +++++.++|+.+..+........  ..+.....+.   .
T Consensus       156 ----------------~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~---~  214 (263)
T PRK07814        156 ----------------GFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAAN--DELRAPMEKA---T  214 (263)
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCC--HHHHHHHHhc---C
Confidence                            33469999999999999988763  48899999998876532210000  0011111111   0


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      +          ...+...+|+++++++++...
T Consensus       215 ~----------~~~~~~~~~va~~~~~l~~~~  236 (263)
T PRK07814        215 P----------LRRLGDPEDIAAAAVYLASPA  236 (263)
T ss_pred             C----------CCCCcCHHHHHHHHHHHcCcc
Confidence            1          112558899999999998754

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.4e-19  Score=157.46  Aligned_cols=215  Identities=17%  Similarity=0.121  Sum_probs=148.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccc-cccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++++++||||+|+||++++++|+++|++|++++|+..+.  ... .+.....++.++.+|++|.+++.++++      
T Consensus         5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999999999975432  111 111122467889999999988877654      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       .+|+|||+|+............++|  ...+++|+.++..+++++..    .+ .+++|++||...+.+.+.       
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~-------  154 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQW--QTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRG-------  154 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHH--HHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCC-------
Confidence             4799999999765433223333333  57899999999888776643    33 568999999764432221       


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                      .+...|+.+|.+.+.+++.++.+   .++++.+++||.+.++....  +...... .....   
T Consensus       155 ----------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~--~~~~~~~-~~~~~---  212 (254)
T PRK06114        155 ----------------LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR--PEMVHQT-KLFEE---  212 (254)
T ss_pred             ----------------CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc--ccchHHH-HHHHh---
Confidence                            01246999999999999998875   47999999999998875321  1111101 11111   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ..+ .++         +..++|+++++++++...
T Consensus       213 ~~p-~~r---------~~~~~dva~~~~~l~s~~  236 (254)
T PRK06114        213 QTP-MQR---------MAKVDEMVGPAVFLLSDA  236 (254)
T ss_pred             cCC-CCC---------CcCHHHHHHHHHHHcCcc
Confidence            111 233         458899999999988753

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.85  E-value=1.2e-19  Score=157.91  Aligned_cols=230  Identities=14%  Similarity=0.094  Sum_probs=156.4

Q ss_pred             CCCCCcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cCCCCCeEEEEccCCCcchHHHhhc
Q 035965            1 MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus         1 m~~~~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      |....++.+++++|+||||+|+||+++++.|+++|++|++++|+.... ..... .....++.++.+|++|.+++.++++
T Consensus         1 ~~~~~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~   80 (255)
T PRK06113          1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_pred             CCCccccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            555555666789999999999999999999999999999999876533 21111 1112357888999999988876543


Q ss_pred             -------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCC
Q 035965           79 -------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSS  147 (348)
Q Consensus        79 -------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~  147 (348)
                             ++|+|||+|+....... ....++|  ...+++|+.++.++++++..    .+ ..++|++||.....+..  
T Consensus        81 ~~~~~~~~~d~li~~ag~~~~~~~-~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~--  154 (255)
T PRK06113         81 FALSKLGKVDILVNNAGGGGPKPF-DMPMADF--RRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNI--  154 (255)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCC-CCCHHHH--HHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCC--
Confidence                   57999999997543221 2222223  46689999999999999863    23 46899999976432111  


Q ss_pred             CCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhh
Q 035965          148 GEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSP  224 (348)
Q Consensus       148 ~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  224 (348)
                                             +...|+.+|.+.+.+++.++++   .++++.++.|+.+..+.......   ..+...
T Consensus       155 -----------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~~~~~~  208 (255)
T PRK06113        155 -----------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT---PEIEQK  208 (255)
T ss_pred             -----------------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccC---HHHHHH
Confidence                                   2346999999999999998765   47999999999987664322111   111111


Q ss_pred             hcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 035965          225 ITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QG-QYICCVK  275 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  275 (348)
                      ....   .+ .+         -+..++|+++++.+++.....  .| .+++.+.
T Consensus       209 ~~~~---~~-~~---------~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        209 MLQH---TP-IR---------RLGQPQDIANAALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_pred             HHhc---CC-CC---------CCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            1111   11 11         156899999999999875432  34 4555443

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.85  E-value=9.2e-20  Score=157.70  Aligned_cols=219  Identities=22%  Similarity=0.199  Sum_probs=149.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++||||+|+||+++++.|+++|++|++++|+....  .... ......++.++.+|+.|.+++.++++       .+
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999975321  1111 11123468899999999988877654       48


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+++............++|  ...++.|+.++.++++++    ++.+ .++||++||...+.+..           
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~-----------  147 (245)
T PRK12824         82 DILVNNAGITRDSVFKRMSHQEW--NDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQF-----------  147 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCCC-----------
Confidence            99999999754333223333333  478899999999886554    4444 67999999976543211           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    ....|+.+|.+.+.+++.++.+   .++++++++|+.+.++......+.    .........    
T Consensus       148 --------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~----~~~~~~~~~----  205 (245)
T PRK12824        148 --------------GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPE----VLQSIVNQI----  205 (245)
T ss_pred             --------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHH----HHHHHHhcC----
Confidence                          2236999999999988888754   479999999999988754321111    111111111    


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEec
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCV  274 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~  274 (348)
                               ..+.+..++|+++++.+++.....   ++.+++.+
T Consensus       206 ---------~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK12824        206 ---------PMKRLGTPEEIAAAVAFLVSEAAGFITGETISING  240 (245)
T ss_pred             ---------CCCCCCCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence                     112255789999999988865322   34555543

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5e-20  Score=159.72  Aligned_cols=199  Identities=15%  Similarity=0.133  Sum_probs=144.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cC--CCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WT--RSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++++||||+|+||.+++++|+++|++|++++|++.+. ..... ..  ...++.++.+|++|.+++.++++       +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999986543 22111 11  12368889999999988776554       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+||............+.+  ...+++|+.++..+++++.    +.+ .+++|++||...+.+.+.         
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~---------  149 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWAN--KATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLPG---------  149 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCCCC---------
Confidence            899999999754433222222222  3678899999999888775    334 678999999765443221         


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.||.+.+.+.+.++.+   .+++++.++|+.+.++.....             +.    
T Consensus       150 ---------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-------------~~----  197 (248)
T PRK08251        150 ---------------VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-------------KS----  197 (248)
T ss_pred             ---------------CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-------------cc----
Confidence                           2346999999999998888765   369999999999876632210             00    


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                          ...       .+..+|+|++++.++++.
T Consensus       198 ----~~~-------~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        198 ----TPF-------MVDTETGVKALVKAIEKE  218 (248)
T ss_pred             ----CCc-------cCCHHHHHHHHHHHHhcC
Confidence                011       578999999999999864

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.1e-19  Score=158.66  Aligned_cols=168  Identities=19%  Similarity=0.139  Sum_probs=126.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .+++++||||||+|+||++++++|+++|++|++++|+..+.       ...++.++.+|+.|.+++.++++       .+
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   78 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-------LPEGVEFVAADLTTAEGCAAVARAVLERLGGV   78 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-------cCCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            45678999999999999999999999999999999976432       11357889999999987765543       58


Q ss_pred             CEEEEccccCccc--cccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           81 DGVFHVAASMEFD--INVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        81 d~Vih~a~~~~~~--~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      |+|||+||.....  .....+.++|  ...+++|+.++..+++++.    +.+ .+++|++||...+.+...        
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~--------  147 (260)
T PRK06523         79 DILVHVLGGSSAPAGGFAALTDEEW--QDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPLPE--------  147 (260)
T ss_pred             CEEEECCcccccCCCCcccCCHHHH--HHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCCC--------
Confidence            9999999964321  1111222333  4778999999988876554    334 568999999764321110        


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPF  209 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~  209 (348)
                                      +...|+.+|.+.+.+++.++.+   .++++..++|+.|.++.
T Consensus       148 ----------------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~  189 (260)
T PRK06523        148 ----------------STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA  189 (260)
T ss_pred             ----------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence                            2346999999999999998866   47999999999998875

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.85  E-value=9.3e-20  Score=158.62  Aligned_cols=215  Identities=12%  Similarity=0.072  Sum_probs=150.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+.++++|||||+|+||.+++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            45678999999999999999999999999999999986543 2211 11112357788999999988877654       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      .+|+|||+|+........+...++|  ...+++|+.++..+++++...   ...++||++||.....+..          
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------  153 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEW--NDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRD----------  153 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCC----------
Confidence            4899999999754332223323333  478999999999998887653   1257899999975432111          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.+|.+.+.+++.++.+   +++++..++||.+..+....... . ..+.......   .
T Consensus       154 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-~-~~~~~~~~~~---~  213 (254)
T PRK08085        154 ---------------TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-D-EAFTAWLCKR---T  213 (254)
T ss_pred             ---------------CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-C-HHHHHHHHhc---C
Confidence                           2346999999999999999876   48999999999998875332110 0 0011111111   1


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      + .++         +...+|+++++.+++...
T Consensus       214 p-~~~---------~~~~~~va~~~~~l~~~~  235 (254)
T PRK08085        214 P-AAR---------WGDPQELIGAAVFLSSKA  235 (254)
T ss_pred             C-CCC---------CcCHHHHHHHHHHHhCcc
Confidence            1 122         668999999999988753

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.8e-20  Score=161.65  Aligned_cols=200  Identities=16%  Similarity=0.048  Sum_probs=144.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++|+||||+|+||+++++.|+++|++|++++|++.+. ......   ..+.++.+|++|++++.++++       ++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL---GLVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999999976543 221111   247889999999988766553       57


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |++||+||............+++  ...+++|+.++..+++.+.    +.+ .++||++||...+.+.+           
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----------  145 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVT--RRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPVP-----------  145 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCCC-----------
Confidence            99999999765433223323333  4688999999888877764    344 67899999976432211           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    ....|+.+|...+.+.+.++.+   .|+++++++|+.+-.+....               .    .
T Consensus       146 --------------~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~---------------~----~  192 (273)
T PRK07825        146 --------------GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAG---------------T----G  192 (273)
T ss_pred             --------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcc---------------c----c
Confidence                          2346999999988887777654   48999999999875442111               0    0


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                      .....       .++.++|+|++++.++.++.
T Consensus       193 ~~~~~-------~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        193 GAKGF-------KNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             cccCC-------CCCCHHHHHHHHHHHHhCCC
Confidence            00111       27899999999999998764

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.85  E-value=8.8e-20  Score=159.13  Aligned_cols=222  Identities=15%  Similarity=0.130  Sum_probs=152.5

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      ..+++++|+||||+|+||++++++|+++|++|++++|+..+. ..... .....++.++.+|+++.+++.++++      
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            346679999999999999999999999999999999986543 22111 1112367899999999988877765      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----C-------CcceEEEeccceeeeecCC
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----E-------SVKRVVLTSSVSTITAKDS  146 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-------~~~~~v~~SS~~~~~~~~~  146 (348)
                       .+|+|||+|+........+...++|  ...+++|+.++..+++++...    .       ...++|++||...+.... 
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-  161 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVDVTPADF--DFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP-  161 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHH--HHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC-
Confidence             5899999999754322222222333  467899999999998877521    1       135899999976432111 


Q ss_pred             CCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHh
Q 035965          147 SGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLS  223 (348)
Q Consensus       147 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~  223 (348)
                                              +...|+.+|.+.+.+++.++.+   .++++++++||.|+++.......   .....
T Consensus       162 ------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~  214 (258)
T PRK06949        162 ------------------------QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE---TEQGQ  214 (258)
T ss_pred             ------------------------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC---hHHHH
Confidence                                    2346999999999999998776   47999999999999886432110   00111


Q ss_pred             hhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          224 PITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                      .+..   .++ .++         +...+|+++++.+++....  ..|.++
T Consensus       215 ~~~~---~~~-~~~---------~~~p~~~~~~~~~l~~~~~~~~~G~~i  251 (258)
T PRK06949        215 KLVS---MLP-RKR---------VGKPEDLDGLLLLLAADESQFINGAII  251 (258)
T ss_pred             HHHh---cCC-CCC---------CcCHHHHHHHHHHHhChhhcCCCCcEE
Confidence            1111   111 122         4578999999999987543  355543

>PRK08324 short chain dehydrogenase; Validated

Probab=99.85  E-value=5.2e-20  Score=180.82  Aligned_cols=235  Identities=19%  Similarity=0.091  Sum_probs=159.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +.+++||||||+|+||+++++.|+++|++|++++|+..+. ..........++.++.+|++|.+++.++++       ++
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i  499 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV  499 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999999987543 221111111368899999999988877664       68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||..........+.++|  ...+++|+.++..+++++.+    .+...+||++||...+.+.+           
T Consensus       500 DvvI~~AG~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~-----------  566 (681)
T PRK08324        500 DIVVSNAGIAISGPIEETSDEDW--RRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGP-----------  566 (681)
T ss_pred             CEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCC-----------
Confidence            99999999765443333333444  47899999999999777753    33126899999976543221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccc-cCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVA-GPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                    ....|+.+|.+.+.+++.++.+.   ++++.+++|+.|| +.+....  .+.. ......+.... 
T Consensus       567 --------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~--~~~~-~~~~~~g~~~~-  628 (681)
T PRK08324        567 --------------NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG--EWIE-ARAAAYGLSEE-  628 (681)
T ss_pred             --------------CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc--hhhh-hhhhhccCChH-
Confidence                          23469999999999999988764   5999999999998 5543211  1110 00111111100 


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhc--CCCCCc-eEEEec
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLME--NDRAQG-QYICCV  274 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~--~~~~~~-~y~~~~  274 (348)
                      ........+...+.+++++|+|+++.+++.  .....| .|++.+
T Consensus       629 ~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdg  673 (681)
T PRK08324        629 ELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDG  673 (681)
T ss_pred             HHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence            000011122356789999999999999884  333334 566644

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.85  E-value=6.6e-20  Score=161.73  Aligned_cols=218  Identities=15%  Similarity=0.113  Sum_probs=147.6

Q ss_pred             CcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc----
Q 035965            5 EESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         5 ~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      ....+++++++||||+|+||++++++|+++|++|++++|+.... .... ......++.++.+|+.|.+++..+++    
T Consensus         4 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          4 NLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             ceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            33455678999999999999999999999999999999976433 2111 11112357889999999988776654    


Q ss_pred             ---CCCEEEEccccCccccc---------------cccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEec
Q 035965           79 ---GCDGVFHVAASMEFDIN---------------VKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTS  136 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~~~~---------------~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~S  136 (348)
                         .+|+|||+|+.......               .+.+.++|  ...+++|+.++..+++.+.    +.+ .++||++|
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~is  160 (278)
T PRK08277         84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGF--EFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINIS  160 (278)
T ss_pred             HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEc
Confidence               68999999996433211               11222333  4678999999887666543    334 57899999


Q ss_pred             cceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCC
Q 035965          137 SVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSS  213 (348)
Q Consensus       137 S~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~  213 (348)
                      |...+.+.+                         +...|+.+|.+.+.+++.++.+.   ++++..++|+.|..+.....
T Consensus       161 S~~~~~~~~-------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~  215 (278)
T PRK08277        161 SMNAFTPLT-------------------------KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRAL  215 (278)
T ss_pred             cchhcCCCC-------------------------CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhh
Confidence            987543211                         23469999999999999998775   79999999999988843211


Q ss_pred             CC---chHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcC
Q 035965          214 VP---SSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEN  263 (348)
Q Consensus       214 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~  263 (348)
                      ..   ............   ..+ .++         +...+|+|+++++++..
T Consensus       216 ~~~~~~~~~~~~~~~~~---~~p-~~r---------~~~~~dva~~~~~l~s~  255 (278)
T PRK08277        216 LFNEDGSLTERANKILA---HTP-MGR---------FGKPEELLGTLLWLADE  255 (278)
T ss_pred             hccccccchhHHHHHhc---cCC-ccC---------CCCHHHHHHHHHHHcCc
Confidence            00   000000000000   011 122         56889999999998876

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.85  E-value=7.3e-20  Score=158.68  Aligned_cols=218  Identities=13%  Similarity=0.132  Sum_probs=144.7

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC-Ccc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP-GKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~-~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      |||+|+||||+|+||+++++.|+++|++|+++.++. .+. ... .+.....++.++.+|++|.+++.++++       .
T Consensus         1 m~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          1 MRKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             CCcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            467999999999999999999999999998776433 222 111 111122468899999999988776553       5


Q ss_pred             CCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhh-cC-----CcceEEEeccceeeeecCCCCCCCC
Q 035965           80 CDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLK-SE-----SVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~-~~-----~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      +|+|||+|+...... ..+...++|  ...+++|+.++..+++.+.+ ..     ...+||++||...+.+...      
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------  152 (248)
T PRK06947         81 LDALVNNAGIVAPSMPLADMDAARL--RRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN------  152 (248)
T ss_pred             CCEEEECCccCCCCCChhhCCHHHH--HHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC------
Confidence            899999999754322 112222223  46789999999888765443 21     1246999999765433221      


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCC-CCchHHHHHhhhcCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSS-VPSSIQVLLSPITGD  228 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~  228 (348)
                                        ....|+.+|.+.+.+++.++++.   +++++++||+.+..+..... .+..   . ... +.
T Consensus       153 ------------------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~---~-~~~-~~  209 (248)
T PRK06947        153 ------------------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGR---A-ARL-GA  209 (248)
T ss_pred             ------------------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHH---H-HHH-hh
Confidence                              12359999999999999888764   79999999999988753211 1100   0 111 11


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY  270 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y  270 (348)
                      ..  + .+.         ...++|+++++++++..+.  ..|.+
T Consensus       210 ~~--~-~~~---------~~~~e~va~~~~~l~~~~~~~~~G~~  241 (248)
T PRK06947        210 QT--P-LGR---------AGEADEVAETIVWLLSDAASYVTGAL  241 (248)
T ss_pred             cC--C-CCC---------CcCHHHHHHHHHHHcCccccCcCCce
Confidence            11  1 111         4578999999999988764  24444

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.3e-20  Score=160.27  Aligned_cols=206  Identities=20%  Similarity=0.147  Sum_probs=145.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc--------CCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--------GCD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~d   81 (348)
                      ||++|||||+|+||++++++|+++|++|++++|+..+. .+.... ...++.++.+|++|.+++.++++        .+|
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL-GAGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            57899999999999999999999999999999987644 222211 12468899999999988876654        469


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+|+..........+.+++  +..+++|+.++..+++++.+    .+ ..++|++||...+++...           
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~-----------  145 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAH--DRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQPG-----------  145 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCCC-----------
Confidence            9999999765433223323333  57899999999999888753    33 578999999765543322           


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                    ...|+.+|...+.+++.++.+   .+++++.++|+.+-.+..........   ...       .. 
T Consensus       146 --------------~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~---~~~-------~~-  200 (260)
T PRK08267        146 --------------LAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVD---AGS-------TK-  200 (260)
T ss_pred             --------------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhh---hhh-------Hh-
Confidence                          236999999999999998755   47999999999986653221000000   000       00 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                       ....       .+..+|++++++.+++.+
T Consensus       201 -~~~~-------~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        201 -RLGV-------RLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             -hccC-------CCCHHHHHHHHHHHHhCC
Confidence             0001       356799999999999754

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3e-20  Score=163.23  Aligned_cols=210  Identities=12%  Similarity=0.057  Sum_probs=146.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CCCE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   82 (348)
                      |+|+||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|+.|.+++.++++       ++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4799999999999999999999999999999976543 2111 11223468889999999988877654       5899


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      |||+|+..........+.++|  +..+++|+.++..+.+.+    ++.+ .+++|++||...+.+..             
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~-------------  144 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDW--DWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQGP-------------  144 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHH--HHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCCC-------------
Confidence            999999765433333333333  467889988888776664    4445 67999999976443211             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                                  ....|+.+|.+.+.+.+.++.+   .++++++++|+.+..+.......... ......       .  
T Consensus       145 ------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~-------~--  202 (270)
T PRK05650        145 ------------AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNP-AMKAQV-------G--  202 (270)
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCch-hHHHHH-------H--
Confidence                        2346999999999888888776   47999999999998875432100000 000000       0  


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ..     ..+.+++++|+|+.++.++++.
T Consensus       203 ~~-----~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        203 KL-----LEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HH-----hhcCCCCHHHHHHHHHHHHhCC
Confidence            00     0122679999999999999864

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.85  E-value=9.7e-21  Score=162.59  Aligned_cols=223  Identities=21%  Similarity=0.181  Sum_probs=150.6

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccCccc
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFD   93 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~   93 (348)
                      |+|+||||.+|++++++|++.+++|.++.|+.++.....+.  ..+++++.+|+.|.+++.++++++|.||.+.+.... 
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~--~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~-   77 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ--ALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHP-   77 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH--HTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCC-
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh--cccceEeecccCCHHHHHHHHcCCceEEeecCcchh-
Confidence            79999999999999999999999999999988543111111  126889999999999999999999999988775431 


Q ss_pred             cccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcc
Q 035965           94 INVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGW  173 (348)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  173 (348)
                                ..       .....+++++|++.| +++||+.|... .+.            +....         .|..
T Consensus        78 ----------~~-------~~~~~~li~Aa~~ag-Vk~~v~ss~~~-~~~------------~~~~~---------~p~~  117 (233)
T PF05368_consen   78 ----------SE-------LEQQKNLIDAAKAAG-VKHFVPSSFGA-DYD------------ESSGS---------EPEI  117 (233)
T ss_dssp             ----------CH-------HHHHHHHHHHHHHHT--SEEEESEESS-GTT------------TTTTS---------TTHH
T ss_pred             ----------hh-------hhhhhhHHHhhhccc-cceEEEEEecc-ccc------------ccccc---------cccc
Confidence                      11       344678999999999 99998644322 110            11000         0223


Q ss_pred             hhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCccee-eHHH
Q 035965          174 VYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALV-HIED  252 (348)
Q Consensus       174 ~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i-~v~D  252 (348)
                      .+-..|...|.+++.    .+++++++||+.++.......    ..  .....+....+...+..+   ....++ +.+|
T Consensus       118 ~~~~~k~~ie~~l~~----~~i~~t~i~~g~f~e~~~~~~----~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D  184 (233)
T PF05368_consen  118 PHFDQKAEIEEYLRE----SGIPYTIIRPGFFMENLLPPF----AP--VVDIKKSKDVVTLPGPGN---QKAVPVTDTRD  184 (233)
T ss_dssp             HHHHHHHHHHHHHHH----CTSEBEEEEE-EEHHHHHTTT----HH--TTCSCCTSSEEEEETTST---SEEEEEEHHHH
T ss_pred             hhhhhhhhhhhhhhh----ccccceeccccchhhhhhhhh----cc--cccccccceEEEEccCCC---ccccccccHHH
Confidence            344578877877766    489999999998765432211    00  011112111222222222   344465 9999


Q ss_pred             HHHHHHHhhcCCCCC--c-eEEEeccCcChHHHHHHHHHhCCC
Q 035965          253 ICNAHIFLMENDRAQ--G-QYICCVKSCPISEFIDHLKLEYPS  292 (348)
Q Consensus       253 ~a~~~~~~~~~~~~~--~-~y~~~~~~~s~~el~~~i~~~~~~  292 (348)
                      ++++...++.++...  + .+.++++.+|+.|+++.+.+.+|+
T Consensus       185 vg~~va~il~~p~~~~~~~~~~~~~~~~t~~eia~~~s~~~G~  227 (233)
T PF05368_consen  185 VGRAVAAILLDPEKHNNGKTIFLAGETLTYNEIAAILSKVLGK  227 (233)
T ss_dssp             HHHHHHHHHHSGGGTTEEEEEEEGGGEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHcChHHhcCCEEEEeCCCCCCHHHHHHHHHHHHCC
Confidence            999999999987654  3 356777899999999999999987

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-19  Score=156.92  Aligned_cols=214  Identities=19%  Similarity=0.168  Sum_probs=145.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cc-ccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+.++|+||||+|+||+++++.|+++|++|+++.|+....  .. ........++.++.+|++|.+++.++++       
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3468999999999999999999999999998887754321  11 1111123468899999999988877765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ++|+|||+|+............++|  ...++.|+.++.++++++.+. ...+++|++||.....+.+            
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------  148 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDF--DRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLP------------  148 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH--HHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCC------------
Confidence            5899999999754322112222222  467899999999999888653 2135899999865322111            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   +.+.|+.+|.+.+.+++.++.+   .+++++.++|+.+-.+.......  ...+......    .+ 
T Consensus       149 -------------~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~--~~~~~~~~~~----~~-  208 (245)
T PRK12937        149 -------------GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKS--AEQIDQLAGL----AP-  208 (245)
T ss_pred             -------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCC--HHHHHHHHhc----CC-
Confidence                         3356999999999999988765   37999999999887664211101  1111111111    01 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                      .+.         +.+++|+++++.+++..+.
T Consensus       209 ~~~---------~~~~~d~a~~~~~l~~~~~  230 (245)
T PRK12937        209 LER---------LGTPEEIAAAVAFLAGPDG  230 (245)
T ss_pred             CCC---------CCCHHHHHHHHHHHcCccc
Confidence            111         5588999999999997643

>PRK12743 oxidoreductase; Provisional

Probab=99.85  E-value=1.6e-19  Score=157.38  Aligned_cols=211  Identities=14%  Similarity=0.080  Sum_probs=146.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      |+++|+||||+|+||.+++++|+++|++|+++.++..+.  .... ......++.++.+|++|.+++.++++       .
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999999887654322  1111 11123468899999999988776654       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+|+............++|  ...+.+|+.++..+++++...    +..+++|++||.....+.           
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-----------  147 (256)
T PRK12743         81 IDVLVNNAGAMTKAPFLDMDFDEW--RKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPL-----------  147 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCC-----------
Confidence            899999999765433223333333  578999999999999987653    223689999997532111           


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                    .+...|+.+|.+.+.+++.++.+   .+++++.++|+.+.++.........   .....    ...
T Consensus       148 --------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~---~~~~~----~~~  206 (256)
T PRK12743        148 --------------PGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDV---KPDSR----PGI  206 (256)
T ss_pred             --------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHH---HHHHH----hcC
Confidence                          03347999999999999988775   4799999999999987533211100   00110    111


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      + .++         +.+.+|++.++.+++...
T Consensus       207 ~-~~~---------~~~~~dva~~~~~l~~~~  228 (256)
T PRK12743        207 P-LGR---------PGDTHEIASLVAWLCSEG  228 (256)
T ss_pred             C-CCC---------CCCHHHHHHHHHHHhCcc
Confidence            1 112         448899999999988754

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.85  E-value=7.7e-20  Score=159.96  Aligned_cols=223  Identities=20%  Similarity=0.161  Sum_probs=149.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccc-cccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ-IFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++++||||+|+||++++++|+++|++|++++|+..... .........++.++.+|++|.+++.++++       .+
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            44689999999999999999999999999999999764221 11111122467889999999988877654       57


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+|+............+++  ...++.|+.++..+++++..    .+ ..++|++||...... ..          
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~-~~----------  149 (263)
T PRK08226         84 DILVNNAGVCRLGSFLDMSDEDR--DFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMV-AD----------  149 (263)
T ss_pred             CEEEECCCcCCCCCcccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccc-CC----------
Confidence            99999999754433223322333  46789999999999998764    23 468999999643110 00          


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCC----CCchHHHHHhhhcCCC
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSS----VPSSIQVLLSPITGDS  229 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~  229 (348)
                                   +....|+.+|.+.|.+++.++++.   +++++.++|+.+.++.....    .+.....+...+... 
T Consensus       150 -------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-  215 (263)
T PRK08226        150 -------------PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKA-  215 (263)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhcc-
Confidence                         022469999999999999988764   79999999999988742210    000000011111111 


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCC--CCCceEE
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQYI  271 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~y~  271 (348)
                        .+ .++         +...+|+++++.+++...  ...|..+
T Consensus       216 --~p-~~~---------~~~~~~va~~~~~l~~~~~~~~~g~~i  247 (263)
T PRK08226        216 --IP-LRR---------LADPLEVGELAAFLASDESSYLTGTQN  247 (263)
T ss_pred             --CC-CCC---------CCCHHHHHHHHHHHcCchhcCCcCceE
Confidence              11 111         558999999999887643  3355443

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.6e-19  Score=158.93  Aligned_cols=167  Identities=19%  Similarity=0.196  Sum_probs=127.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   82 (348)
                      ||+++||||+|+||+++++.|+++|++|++++|+..+. ....     .++.++.+|++|.+++.++++       ++|+
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-----AGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            47899999999999999999999999999999976543 2211     247788999999988876653       5899


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      |||+||........+...++|  ...+++|+.++.++++++...  ....++|++||...+.+.+               
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------  138 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAM--RRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTP---------------  138 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCC---------------
Confidence            999999754433223333333  478999999999999987542  1136899999976433211               


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCC
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPF  209 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~  209 (348)
                                ....|+.+|.+.+.+.+.++.+   .|++++.++|+.|..+.
T Consensus       139 ----------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~  180 (274)
T PRK05693        139 ----------FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF  180 (274)
T ss_pred             ----------CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence                      2246999999999998887765   58999999999997764

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1e-19  Score=157.03  Aligned_cols=197  Identities=18%  Similarity=0.166  Sum_probs=144.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcC----CCEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMG----CDGVFH   85 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~d~Vih   85 (348)
                      |++++||||+|+||++++++|+++|++|++++|++.+. .+..   ...++.++.+|++|.+++.++++.    +|.++|
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT---QSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH---hcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            47899999999999999999999999999999976543 2221   123688899999999999887764    689999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      +|+............++|  +..+++|+.++.++++++... ....++|++||.....+.+                   
T Consensus        78 ~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-------------------  136 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLM--ARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALP-------------------  136 (240)
T ss_pred             cCcccccCCCCCCCHHHH--HHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCC-------------------
Confidence            998543222111222223  468999999999999998863 1135799999865432211                   


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHH---hCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccC
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFAN---ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNR  241 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (348)
                            ....|+.+|...+.+.+.++.   ..+++++.+||+.++++.....               ....+     .  
T Consensus       137 ------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~---------------~~~~~-----~--  188 (240)
T PRK06101        137 ------RAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN---------------TFAMP-----M--  188 (240)
T ss_pred             ------CCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC---------------CCCCC-----c--
Confidence                  223699999999999988874   3589999999999998743311               00000     1  


Q ss_pred             CCCcceeeHHHHHHHHHHhhcCC
Q 035965          242 MGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       242 ~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                           .+..+|+++.++..++..
T Consensus       189 -----~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        189 -----IITVEQASQEIRAQLARG  206 (240)
T ss_pred             -----ccCHHHHHHHHHHHHhcC
Confidence                 468999999999999875

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.2e-19  Score=157.72  Aligned_cols=210  Identities=15%  Similarity=0.126  Sum_probs=142.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc-c-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK-L-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~-~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .++|+|+||||+|+||+++++.|+++|++|+++.++... . ......  ..++.++.+|+.|.+++.++++       .
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL--GDRAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            345799999999999999999999999999887654322 1 111111  1368889999999988877664       2


Q ss_pred             -CCEEEEccccCcc------ccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCC
Q 035965           80 -CDGVFHVAASMEF------DINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSG  148 (348)
Q Consensus        80 -~d~Vih~a~~~~~------~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  148 (348)
                       +|+|||+|+....      ......+.++|  ...+++|+.++.++++++..    .+ ..++|++||....  ...  
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~--~~~--  153 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDF--QQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQ--NPV--  153 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHH--HHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCcccc--CCC--
Confidence             8999999985321      01111112222  46799999999999998863    23 5789999985421  111  


Q ss_pred             CCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhh
Q 035965          149 EWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPI  225 (348)
Q Consensus       149 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~  225 (348)
                                           .+.+.|+.+|.+.|.+++.++++   .++++..++||.+..+......+.   ......
T Consensus       154 ---------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~---~~~~~~  209 (253)
T PRK08642        154 ---------------------VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPD---EVFDLI  209 (253)
T ss_pred             ---------------------CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCH---HHHHHH
Confidence                                 13457999999999999999877   469999999998876532211111   111111


Q ss_pred             cCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          226 TGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      .. .  .+ .         ..+.+.+|+++++.+++...
T Consensus       210 ~~-~--~~-~---------~~~~~~~~va~~~~~l~~~~  235 (253)
T PRK08642        210 AA-T--TP-L---------RKVTTPQEFADAVLFFASPW  235 (253)
T ss_pred             Hh-c--CC-c---------CCCCCHHHHHHHHHHHcCch
Confidence            11 1  11 1         12779999999999999754

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.84  E-value=2.1e-19  Score=156.28  Aligned_cols=216  Identities=16%  Similarity=0.072  Sum_probs=148.9

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +.+++++++||||+|+||++++++|++.|++|+++++.........+.....++.++.+|++|.+++.++++       .
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGH   85 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            346678999999999999999999999999999888754322111111112357889999999988877664       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||+||........+.+.++|  ...+++|+.++..+++++...    +...++|++||...+.+...         
T Consensus        86 ~D~li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  154 (253)
T PRK08993         86 IDILVNNAGLIRREDAIEFSEKDW--DDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR---------  154 (253)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC---------
Confidence            899999999754333223333344  578999999999999887542    22368999999865432211         


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                      ...|+.+|.+.|.+.+.++.+   .++++..++||.+-.+......+..  ........   .+
T Consensus       155 ----------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~--~~~~~~~~---~~  213 (253)
T PRK08993        155 ----------------VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADE--QRSAEILD---RI  213 (253)
T ss_pred             ----------------CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccch--HHHHHHHh---cC
Confidence                            135999999999999998877   5799999999999776422110000  00001111   11


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      + .++         +.-.+|+++++.+++...
T Consensus       214 p-~~r---------~~~p~eva~~~~~l~s~~  235 (253)
T PRK08993        214 P-AGR---------WGLPSDLMGPVVFLASSA  235 (253)
T ss_pred             C-CCC---------CcCHHHHHHHHHHHhCcc
Confidence            1 122         567899999999998754

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.84  E-value=1.4e-19  Score=156.64  Aligned_cols=220  Identities=19%  Similarity=0.195  Sum_probs=149.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++++||||+|+||+++++.|+++|+.|++.+|+..+. .....  ...++.++.+|++|.+++.++++       ++
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAE--LGERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH--hCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4468999999999999999999999999998888876543 22111  12367889999999988877643       58


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+|+............++|  ...+++|+.++.++++++.+    .+ .+++|++||...+++.+.          
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~----------  148 (245)
T PRK12936         82 DILVNNAGITKDGLFVRMSDEDW--DSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNPG----------  148 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHH--HHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCCCC----------
Confidence            99999999754432222222333  47899999999999887653    23 578999999765543222          


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                     ...|+.+|.+.+.+++.++++   .+++++.++|+.+..+..... ...   ......+   ..+
T Consensus       149 ---------------~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~---~~~~~~~---~~~  206 (245)
T PRK12936        149 ---------------QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL-NDK---QKEAIMG---AIP  206 (245)
T ss_pred             ---------------CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc-ChH---HHHHHhc---CCC
Confidence                           135999999998888887665   479999999998766533211 100   0000111   011


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QG-QYICCVK  275 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  275 (348)
                                .+.+.+.+|+++++.+++.....  .| .+++.++
T Consensus       207 ----------~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        207 ----------MKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGG  241 (245)
T ss_pred             ----------CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence                      11256899999999988865432  34 4555443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.84  E-value=1.6e-19  Score=156.74  Aligned_cols=214  Identities=16%  Similarity=0.087  Sum_probs=147.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .+++|+++||||+|.||.+++++|+++|++|++++|+..+...........++.++.+|++|.+++.++++       .+
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            45578999999999999999999999999999998864322111111122468889999999998877764       58


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |++||+||........+.+.++|  ...+++|+.++..+++++..    .+...++|++||...+.+..           
T Consensus        85 D~lv~~ag~~~~~~~~~~~~~~~--~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------  151 (251)
T PRK12481         85 DILINNAGIIRRQDLLEFGNKDW--DDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI-----------  151 (251)
T ss_pred             CEEEECCCcCCCCCcccCCHHHH--HHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC-----------
Confidence            99999999755433223333444  57899999999988887754    22236899999987543221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    ....|+.+|.+.+.+.+.++.+   +|+++..++||.+-.+..... ... .........   .++
T Consensus       152 --------------~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~-~~~-~~~~~~~~~---~~p  212 (251)
T PRK12481        152 --------------RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL-RAD-TARNEAILE---RIP  212 (251)
T ss_pred             --------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc-ccC-hHHHHHHHh---cCC
Confidence                          1235999999999999988875   589999999999876532210 000 000000001   111


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMEN  263 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~  263 (348)
                       .++         +...+|+++++.+++..
T Consensus       213 -~~~---------~~~peeva~~~~~L~s~  232 (251)
T PRK12481        213 -ASR---------WGTPDDLAGPAIFLSSS  232 (251)
T ss_pred             -CCC---------CcCHHHHHHHHHHHhCc
Confidence             122         56899999999999874

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2e-19  Score=156.28  Aligned_cols=213  Identities=16%  Similarity=0.159  Sum_probs=143.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc-CCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc--------
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVR-DPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM--------   78 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r-~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------   78 (348)
                      ++|+++||||+|+||++++++|++.|++|+++.+ +..+. ... .+......+.++.+|+.+.+++..+++        
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            4689999999999999999999999999988754 33222 111 111122356778899999876543321        


Q ss_pred             -----CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 -----GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 -----~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                           .+|++||+||........+...++|  ...+++|+.++..+++++... ....+||++||...+.+.+       
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~--~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-------  153 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFF--DRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP-------  153 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHH--HHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC-------
Confidence                 5899999999754332223333334  578899999999999887653 2136899999987532211       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        ....|+.||.+.+.+++.++.+   .++++..+.|+.|.++........  .........  
T Consensus       154 ------------------~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~--~~~~~~~~~--  211 (252)
T PRK12747        154 ------------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD--PMMKQYATT--  211 (252)
T ss_pred             ------------------CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC--HHHHHHHHh--
Confidence                              2246999999999999998776   479999999999988753211110  000000000  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                        ..         ..+.+.+++|+++++.+++...
T Consensus       212 --~~---------~~~~~~~~~dva~~~~~l~s~~  235 (252)
T PRK12747        212 --IS---------AFNRLGEVEDIADTAAFLASPD  235 (252)
T ss_pred             --cC---------cccCCCCHHHHHHHHHHHcCcc
Confidence              00         1122679999999999988753

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.3e-19  Score=156.12  Aligned_cols=214  Identities=19%  Similarity=0.163  Sum_probs=145.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++++++||||+|+||.+++++|+++|++|++++|++.+. .... +.....++.++.+|++|++++.++++       .
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            3467999999999999999999999999999999986544 2211 11122467889999999988877664       5


Q ss_pred             CCEEEEccccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           80 CDGVFHVAASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        80 ~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +|++||+|+..... .....+.++|  ...+++|+.++..+++++.    +.+ .+++|++||...+.. ..        
T Consensus        84 id~li~~ag~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~-~~--------  151 (254)
T PRK07478         84 LDIAFNNAGTLGEMGPVAEMSLEGW--RETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTA-GF--------  151 (254)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhcc-CC--------
Confidence            89999999975321 1112222333  5789999988887766543    344 578999999754311 01        


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                     +....|+.||.+.+.+++.++.+.   ++++..++||.+-.+........  ..........   
T Consensus       152 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~---  211 (254)
T PRK07478        152 ---------------PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT--PEALAFVAGL---  211 (254)
T ss_pred             ---------------CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC--HHHHHHHHhc---
Confidence                           023469999999999999988764   69999999999876632211000  0000111110   


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      .+ .+         .+..++|+++++++++...
T Consensus       212 ~~-~~---------~~~~~~~va~~~~~l~s~~  234 (254)
T PRK07478        212 HA-LK---------RMAQPEEIAQAALFLASDA  234 (254)
T ss_pred             CC-CC---------CCcCHHHHHHHHHHHcCch
Confidence            01 11         2558999999999998754

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.84  E-value=1.1e-19  Score=157.64  Aligned_cols=208  Identities=17%  Similarity=0.229  Sum_probs=143.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~V   83 (348)
                      |+|+||||+|+||.++++.|+++|++|++++|++.+. ......  ..++.++.+|+.|.+++.++++       ++|+|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL--GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5799999999999999999999999999999987544 222111  2368889999999988876654       68999


Q ss_pred             EEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           84 FHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        84 ih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      ||+||.... ......+.++|  ...+++|+.++..+++.+.    +.+ .+++|++||.....+..             
T Consensus        79 i~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-------------  142 (248)
T PRK10538         79 VNNAGLALGLEPAHKASVEDW--ETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYA-------------  142 (248)
T ss_pred             EECCCccCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCCCC-------------
Confidence            999986432 11112222223  4789999999777666654    344 67899999976432110             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                                  +...|+.+|.+.|.+.+.++.+   .++++..++||.+.|+.....          .+.+......  
T Consensus       143 ------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~----------~~~~~~~~~~--  198 (248)
T PRK10538        143 ------------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV----------RFKGDDGKAE--  198 (248)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchh----------hccCcHHHHH--
Confidence                        3346999999999999988776   369999999999987643210          0000000000  


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                      ...    ....++..+|+|+++++++..+.
T Consensus       199 ~~~----~~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        199 KTY----QNTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             hhc----cccCCCCHHHHHHHHHHHhcCCC
Confidence            000    01126789999999999987653

>PRK07985 oxidoreductase; Provisional

Probab=99.84  E-value=3.7e-19  Score=157.98  Aligned_cols=214  Identities=13%  Similarity=0.054  Sum_probs=147.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---ccccc-cCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      ++.++++||||+|+||++++++|+++|++|++++|+....   ..... .....++.++.+|++|.+++.++++      
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4458999999999999999999999999999887654321   11111 1112357789999999988776654      


Q ss_pred             -CCCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           79 -GCDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 -~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                       ++|++||+|+.... ....+.+.++|  ...+++|+.++..+++++... ....+||++||...+.+.+          
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~----------  194 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQF--QKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP----------  194 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC----------
Confidence             57999999986422 22223333444  578999999999999998753 1136899999987543221          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     ....|+.+|.+.+.+++.++.+   .|+++..++|+.|.++....... .-. .......   ..
T Consensus       195 ---------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~-~~~-~~~~~~~---~~  254 (294)
T PRK07985        195 ---------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ-TQD-KIPQFGQ---QT  254 (294)
T ss_pred             ---------------CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC-CHH-HHHHHhc---cC
Confidence                           1236999999999999999876   58999999999999985321100 000 1111111   11


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      + .+         .+...+|+|+++.+++...
T Consensus       255 ~-~~---------r~~~pedva~~~~fL~s~~  276 (294)
T PRK07985        255 P-MK---------RAGQPAELAPVYVYLASQE  276 (294)
T ss_pred             C-CC---------CCCCHHHHHHHHHhhhChh
Confidence            1 12         2558999999999998754

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.2e-19  Score=156.19  Aligned_cols=213  Identities=17%  Similarity=0.125  Sum_probs=147.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      ++++++|||||+|+||.++++.|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       .
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG   86 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4578999999999999999999999999999999976543 2211 11112467889999999988877654       6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||+|+............++|  ...+++|+.++..+++++...    +...++|++||.........         
T Consensus        87 id~lv~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------  155 (253)
T PRK05867         87 IDIAVCNAGIITVTPMLDMPLEEF--QRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP---------  155 (253)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHH--HHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC---------
Confidence            899999999765433223333334  467899999999999987532    21357999988653211000         


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                    .....|+.+|.+.+.+.+.++++   .|+++..++||.+-.+..... +   . ....+..   ..
T Consensus       156 --------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~-~---~-~~~~~~~---~~  213 (253)
T PRK05867        156 --------------QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY-T---E-YQPLWEP---KI  213 (253)
T ss_pred             --------------CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc-h---H-HHHHHHh---cC
Confidence                          01246999999999999999876   479999999999976643211 1   1 1111111   11


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      + .++         +...+|+|+++.+++...
T Consensus       214 ~-~~r---------~~~p~~va~~~~~L~s~~  235 (253)
T PRK05867        214 P-LGR---------LGRPEELAGLYLYLASEA  235 (253)
T ss_pred             C-CCC---------CcCHHHHHHHHHHHcCcc
Confidence            1 222         568999999999998753

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.6e-19  Score=157.65  Aligned_cols=215  Identities=14%  Similarity=0.098  Sum_probs=148.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cC--CCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WT--RSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~--~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +++|+++||||+|+||.++++.|+++|++|++++|+..+. ..... ..  ...++.++.+|++|.+++.++++      
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4568999999999999999999999999999999976543 22111 11  12457889999999988877664      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       .+|++||+||..........+.++|  ...+++|+.++..+++++..    .+ .+++|++||.....+.+        
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  153 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDW--RRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKIIP--------  153 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHH--HHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCCC--------
Confidence             5899999999754333223333344  57899999999999888753    33 46899999976432211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCc--hHHHHHhhhcCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPS--SIQVLLSPITGD  228 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~--~~~~~~~~~~~~  228 (348)
                                       ....|+.+|.+.+.+.+.++.+.   ++++..++||.+-.+........  ........... 
T Consensus       154 -----------------~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-  215 (260)
T PRK07063        154 -----------------GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLA-  215 (260)
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHh-
Confidence                             22469999999999999998764   79999999999866532110000  00000000000 


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                        ..+ .++         +...+|++.++++++...
T Consensus       216 --~~~-~~r---------~~~~~~va~~~~fl~s~~  239 (260)
T PRK07063        216 --LQP-MKR---------IGRPEEVAMTAVFLASDE  239 (260)
T ss_pred             --cCC-CCC---------CCCHHHHHHHHHHHcCcc
Confidence              111 222         457899999999998754

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=4.4e-19  Score=152.51  Aligned_cols=207  Identities=18%  Similarity=0.208  Sum_probs=143.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCc-chHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVE-GSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~d~Vih~a   87 (348)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.....       ..++.++.+|+++. +.+.+.+..+|+|||+|
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~a   75 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-------SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTA   75 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-------CCcEEEEECChHHHHHHHHHhhCCCCEEEECC
Confidence            45689999999999999999999999999999998754211       13678899999997 33334445789999999


Q ss_pred             ccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           88 ASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        88 ~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      +.... ........++|  ...+++|+.++.++++++...   ...+++|++||...+.+..                  
T Consensus        76 g~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------------  135 (235)
T PRK06550         76 GILDDYKPLLDTSLEEW--QHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG------------------  135 (235)
T ss_pred             CCCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC------------------
Confidence            86422 11112222233  478999999999999988642   1146899999986543221                  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccccccc
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSN  240 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (348)
                             ....|+.+|...+.+.+.++.+.   +++++.++|+.+.++......+.  ..+.......   .+ .     
T Consensus       136 -------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~---~~-~-----  197 (235)
T PRK06550        136 -------GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP--GGLADWVARE---TP-I-----  197 (235)
T ss_pred             -------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc--hHHHHHHhcc---CC-c-----
Confidence                   12359999999999999888764   79999999999988754322110  0111111110   11 1     


Q ss_pred             CCCCcceeeHHHHHHHHHHhhcCC
Q 035965          241 RMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       241 ~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                          ..+...+|+|+++++++...
T Consensus       198 ----~~~~~~~~~a~~~~~l~s~~  217 (235)
T PRK06550        198 ----KRWAEPEEVAELTLFLASGK  217 (235)
T ss_pred             ----CCCCCHHHHHHHHHHHcChh
Confidence                12668899999999998653

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.5e-19  Score=158.92  Aligned_cols=204  Identities=15%  Similarity=0.130  Sum_probs=143.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+++++|+||||+|+||.++++.|+++|++|++++|+..+. .... .......+.++.+|+.|.+++.++++       
T Consensus        37 ~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  116 (293)
T PRK05866         37 DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIG  116 (293)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            34568999999999999999999999999999999986543 2111 11112357789999999998877765       


Q ss_pred             CCCEEEEccccCcccccccc--ccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 GCDGVFHVAASMEFDINVKD--NIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      ++|+|||+||........+.  ..+++  ...+++|+.++..+++++.    +.+ ..++|++||.+++... .      
T Consensus       117 ~id~li~~AG~~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-~------  186 (293)
T PRK05866        117 GVDILINNAGRSIRRPLAESLDRWHDV--ERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEA-S------  186 (293)
T ss_pred             CCCEEEECCCCCCCcchhhccccHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCC-C------
Confidence            68999999997544321111  11122  4678999999888888664    444 5799999997533210 1      


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                       +....|+.+|.+.+.+++.++.+   .+++++.++||.+-.+.....                
T Consensus       187 -----------------p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~----------------  233 (293)
T PRK05866        187 -----------------PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT----------------  233 (293)
T ss_pred             -----------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc----------------
Confidence                             02346999999999998888766   479999999997765532110                


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ....   ...       .+..+++|+.++.++++.
T Consensus       234 ~~~~---~~~-------~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        234 KAYD---GLP-------ALTADEAAEWMVTAARTR  258 (293)
T ss_pred             cccc---CCC-------CCCHHHHHHHHHHHHhcC
Confidence            0000   011       457899999999999864

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.84  E-value=2.7e-19  Score=156.11  Aligned_cols=213  Identities=17%  Similarity=0.107  Sum_probs=147.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccc-cCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSK-WTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++||||||+|+||.+++++|++.|++|++++|+......... .....++.++.+|++|.+++.++++       .+
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999987321121111 1122468899999999988877665       57


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |++||+|+............++|  +..+++|+.++..+++++..    .+ .+++|++||...+.+..           
T Consensus        93 d~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----------  158 (258)
T PRK06935         93 DILVNNAGTIRRAPLLEYKDEDW--NAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGK-----------  158 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHH--HHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCCC-----------
Confidence            99999999754332222323333  47789999998888776653    34 57899999987543221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    ....|+.+|.+.+.+++.++++.   +++++.++||.+..+....... .-........    .++
T Consensus       159 --------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~----~~~  219 (258)
T PRK06935        159 --------------FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA-DKNRNDEILK----RIP  219 (258)
T ss_pred             --------------CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc-ChHHHHHHHh----cCC
Confidence                          22369999999999999998864   7999999999988764321100 0000001110    111


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                       .+         -+...+|++.++.+++...
T Consensus       220 -~~---------~~~~~~dva~~~~~l~s~~  240 (258)
T PRK06935        220 -AG---------RWGEPDDLMGAAVFLASRA  240 (258)
T ss_pred             -CC---------CCCCHHHHHHHHHHHcChh
Confidence             12         2668899999999988754

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3e-19  Score=155.50  Aligned_cols=211  Identities=17%  Similarity=0.153  Sum_probs=142.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++|+||||+|+||.+++++|+++|++|++++|+..+. ......    ...++.+|++|.+++.++++       ++
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----GGLFVPTDVTDEDAVNALFDTAAETYGSV   80 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            5678999999999999999999999999999999976543 221111    23578999999988877665       57


Q ss_pred             CEEEEccccCccc--cccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           81 DGVFHVAASMEFD--INVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        81 d~Vih~a~~~~~~--~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      |+|||+|+.....  ...+.+.+.|  ...+++|+.++..+++.+.    +.+ ..++|++||.....+...        
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~~--------  149 (255)
T PRK06057         81 DIAFNNAGISPPEDDSILNTGLDAW--QRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSAT--------  149 (255)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHH--HHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCCC--------
Confidence            9999999865321  1112222223  4788899999988777664    333 568999998654332211        


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      +...|+.+|.+.+.+.+.++.+   .+++++.++|+.+.++..............+.+    ..
T Consensus       150 ----------------~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~----~~  209 (255)
T PRK06057        150 ----------------SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRL----VH  209 (255)
T ss_pred             ----------------CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHH----hc
Confidence                            2235999998888777765543   379999999999988754321110000010100    01


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ++ .+         .+..++|+++++..++...
T Consensus       210 ~~-~~---------~~~~~~~~a~~~~~l~~~~  232 (255)
T PRK06057        210 VP-MG---------RFAEPEEIAAAVAFLASDD  232 (255)
T ss_pred             CC-CC---------CCcCHHHHHHHHHHHhCcc
Confidence            11 11         2779999999999888653

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.1e-19  Score=162.12  Aligned_cols=208  Identities=14%  Similarity=0.079  Sum_probs=144.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +.+++|+||||+|+||.+++++|+++|++|++++|+..+. .... ......++.++.+|++|.+++.++++       .
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~   85 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP   85 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            4568999999999999999999999999999999976543 2111 11122467889999999998877654       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||+|+........+.+.++|  ...+++|+.+..++++.+    ++.+ .++||++||...+.+.+          
T Consensus        86 iD~lInnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~~----------  152 (334)
T PRK07109         86 IDTWVNNAMVTVFGPFEDVTPEEF--RRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSIP----------  152 (334)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCCC----------
Confidence            899999999754333223333333  467888877776655544    4444 57899999987543221          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                     ....|+.+|.+.+.+.+.++.+     .+++++.++|+.+..|....        ..........
T Consensus       153 ---------------~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~--------~~~~~~~~~~  209 (334)
T PRK07109        153 ---------------LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW--------ARSRLPVEPQ  209 (334)
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh--------hhhhcccccc
Confidence                           2246999999999888887654     36999999999987663211        1011100000


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                                  ....+..++|+|++++.+++++
T Consensus       210 ------------~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        210 ------------PVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             ------------CCCCCCCHHHHHHHHHHHHhCC
Confidence                        0112668999999999999876

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.5e-19  Score=154.92  Aligned_cols=213  Identities=18%  Similarity=0.185  Sum_probs=147.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++++||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       .+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL--GERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            4568999999999999999999999999999999986543 222111  2358899999999988877664       57


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      |++||+|+...... ...+.++|  ...+++|+.++..+++++...  ....++|++||.....+..             
T Consensus        82 d~lv~~ag~~~~~~-~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-------------  145 (261)
T PRK08265         82 DILVNLACTYLDDG-LASSRADW--LAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT-------------  145 (261)
T ss_pred             CEEEECCCCCCCCc-CcCCHHHH--HHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-------------
Confidence            99999999653322 12333444  578899999999999877642  2246899999976543221             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                                  ....|+.+|.+.+.+.+.++.+   .++++..++|+.+..+.................    ......
T Consensus       146 ------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~----~~~~p~  209 (261)
T PRK08265        146 ------------GRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVA----APFHLL  209 (261)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhh----cccCCC
Confidence                        2236999999999999998876   479999999998876532110000000000000    000112


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ++         +...+|+|+++.+++...
T Consensus       210 ~r---------~~~p~dva~~~~~l~s~~  229 (261)
T PRK08265        210 GR---------VGDPEEVAQVVAFLCSDA  229 (261)
T ss_pred             CC---------ccCHHHHHHHHHHHcCcc
Confidence            22         457899999999999754

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2e-19  Score=154.89  Aligned_cols=204  Identities=21%  Similarity=0.214  Sum_probs=144.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++|+||||+|+||++++++|+++|++|++++|++.+. ..........++.++.+|+.|.+++..+++       ++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3457899999999999999999999999999999987543 221111111468899999999988877664       68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      |+|||+++............+++  ...+++|+.++..+++++...  ...+++|++||...+.+..             
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-------------  148 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEW--RLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFA-------------  148 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHH--HHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCC-------------
Confidence            99999998754332112222222  467899999999998887643  1246899999975432111             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                                  ....|+.+|.+.+.+.+.++.+   .+++++.+||+.+..+..... +           .  ..    
T Consensus       149 ------------~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-~-----------~--~~----  198 (237)
T PRK07326        149 ------------GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-P-----------S--EK----  198 (237)
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-c-----------c--hh----
Confidence                        2346999999999888887644   589999999999877642211 0           0  00    


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                       ...       .+..+|+++++..++..+.
T Consensus       199 -~~~-------~~~~~d~a~~~~~~l~~~~  220 (237)
T PRK07326        199 -DAW-------KIQPEDIAQLVLDLLKMPP  220 (237)
T ss_pred             -hhc-------cCCHHHHHHHHHHHHhCCc
Confidence             001       3678999999999998764

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.6e-19  Score=156.65  Aligned_cols=220  Identities=18%  Similarity=0.110  Sum_probs=147.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++++|+||||+|+||++++++|+++|++|++++|++++. ... .......++.++.+|++|.+++.++++       .
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3468999999999999999999999999999999976543 221 111112356788999999988877654       4


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|+|||+|+............++|  ...+++|+.++.++++++...  ...++||++||...+.+.+            
T Consensus        87 iD~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~------------  152 (264)
T PRK07576         87 IDVLVSGAAGNFPAPAAGMSANGF--KTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMP------------  152 (264)
T ss_pred             CCEEEECCCCCCCCccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCC------------
Confidence            799999998543222122222222  467889999999999988643  1136899999975432111            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCC-CCchHHHHHhhhcCCCCccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSS-VPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~  233 (348)
                                   ....|+.+|.+.|.+++.++.+   .+++++.++|+.+.+...... .+..  ........   ..+
T Consensus       153 -------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~--~~~~~~~~---~~~  214 (264)
T PRK07576        153 -------------MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSP--ELQAAVAQ---SVP  214 (264)
T ss_pred             -------------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCH--HHHHHHHh---cCC
Confidence                         2346999999999999998766   479999999998875321100 0000  00000000   011


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY  270 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y  270 (348)
                                .+.++..+|+++++++++..+.  ..|.+
T Consensus       215 ----------~~~~~~~~dva~~~~~l~~~~~~~~~G~~  243 (264)
T PRK07576        215 ----------LKRNGTKQDIANAALFLASDMASYITGVV  243 (264)
T ss_pred             ----------CCCCCCHHHHHHHHHHHcChhhcCccCCE
Confidence                      1226689999999999997543  24544

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.83  E-value=2.9e-19  Score=153.91  Aligned_cols=217  Identities=18%  Similarity=0.146  Sum_probs=147.1

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------CCCEE
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------GCDGV   83 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~V   83 (348)
                      |+|||++|+||++++++|+++|++|++++|+..+.  ... .......++.++.+|++|.+++.++++       .+|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999999875321  111 111122357889999999998877664       46999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      ||+++............+++  +..++.|+.++..+++.+...   ...+++|++||.+.+++.+               
T Consensus        81 i~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~---------------  143 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDW--DAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA---------------  143 (239)
T ss_pred             EECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC---------------
Confidence            99999754322111111222  478899999999999988753   1256999999976554322               


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                                +...|+.+|.+.+.+++.++++   .+++++++||+.+.++.... .+.   .+...+.+..   + .+ 
T Consensus       144 ----------~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~-~~~---~~~~~~~~~~---~-~~-  204 (239)
T TIGR01830       144 ----------GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDK-LSE---KVKKKILSQI---P-LG-  204 (239)
T ss_pred             ----------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh-cCh---HHHHHHHhcC---C-cC-
Confidence                      2246999999999988887765   48999999999887653322 111   1111111111   1 11 


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCCC--C-CceEEEec
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMENDR--A-QGQYICCV  274 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~  274 (348)
                              -+.+++|++++++.++....  . +..|++.+
T Consensus       205 --------~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~  236 (239)
T TIGR01830       205 --------RFGTPEEVANAVAFLASDEASYITGQVIHVDG  236 (239)
T ss_pred             --------CCcCHHHHHHHHHHHhCcccCCcCCCEEEeCC
Confidence                    16689999999998885432  2 33566644

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK12742 oxidoreductase; Provisional

Probab=99.83  E-value=5.4e-19  Score=152.16  Aligned_cols=208  Identities=15%  Similarity=0.130  Sum_probs=142.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGV   83 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~V   83 (348)
                      +++++||||||+|+||++++++|+++|++|+++.++..+.  .+...    .++.++.+|++|.+++.++++   .+|++
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~l   79 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE----TGATAVQTDSADRDAVIDVVRKSGALDIL   79 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH----hCCeEEecCCCCHHHHHHHHHHhCCCcEE
Confidence            4568999999999999999999999999998877643222  21111    135678899999888777664   48999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI  162 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~  162 (348)
                      ||+|+..........+.++|  ...+++|+.++..+++.+... ...+++|++||.....   .      +.        
T Consensus        80 i~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---~------~~--------  140 (237)
T PRK12742         80 VVNAGIAVFGDALELDADDI--DRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR---M------PV--------  140 (237)
T ss_pred             EECCCCCCCCCcccCCHHHH--HHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc---C------CC--------
Confidence            99999754332222223333  578999999999998766553 2246899999965311   0      10        


Q ss_pred             chhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccc
Q 035965          163 HHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVS  239 (348)
Q Consensus       163 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (348)
                             ++...|+.+|.+.|.+++.++.+   .+++++.++||.+..+......+     .......   ..+ .++  
T Consensus       141 -------~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-----~~~~~~~---~~~-~~~--  202 (237)
T PRK12742        141 -------AGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP-----MKDMMHS---FMA-IKR--  202 (237)
T ss_pred             -------CCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH-----HHHHHHh---cCC-CCC--
Confidence                   03356999999999999988765   47999999999997764322111     1111111   011 112  


Q ss_pred             cCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          240 NRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       240 ~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                             +...+|+++++.+++...
T Consensus       203 -------~~~p~~~a~~~~~l~s~~  220 (237)
T PRK12742        203 -------HGRPEEVAGMVAWLAGPE  220 (237)
T ss_pred             -------CCCHHHHHHHHHHHcCcc
Confidence                   568999999999998754

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.7e-19  Score=155.98  Aligned_cols=200  Identities=14%  Similarity=0.106  Sum_probs=144.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-c-CCCCCeEEEEccCCCcchHHHhhc----CCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-W-TRSDRLRLFQADLQVEGSFDKAVM----GCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~-~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~V   83 (348)
                      ||+|+||||+|+||.++++.|+++|++|++++|++++. ..... . ....++.++.+|++|.+++.++++    .+|+|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            57899999999999999999999999999999987543 21111 0 112468899999999988877665    46999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      ||+++..........+.+++  ...+++|+.++.++++++...   ...+++|++||.....+..               
T Consensus        81 v~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------  143 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALA--LREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRA---------------  143 (243)
T ss_pred             EECCcCCCCcccccCCHHHH--HHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCC---------------
Confidence            99998654433222222222  367889999999999887642   2267899999975322211               


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                                ....|+.+|...+.+.+.++.+   .+++++.++|+.++++.....                 ..+   .
T Consensus       144 ----------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-----------------~~~---~  193 (243)
T PRK07102        144 ----------SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-----------------KLP---G  193 (243)
T ss_pred             ----------CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-----------------CCC---c
Confidence                      1235999999999999888654   479999999999988632110                 000   1


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ..       .+.++|+++.++.+++++
T Consensus       194 ~~-------~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        194 PL-------TAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             cc-------cCCHHHHHHHHHHHHhCC
Confidence            11       567999999999999865

>PRK08589 short chain dehydrogenase; Validated

Probab=99.83  E-value=4.3e-19  Score=155.96  Aligned_cols=218  Identities=17%  Similarity=0.133  Sum_probs=145.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc-ccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++|++|||||+|+||.+++++|+++|++|++++|+ .+. .. ..+.....++.++.+|++|.+++..+++       .
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999998 432 21 1111122358899999999988876654       4


Q ss_pred             CCEEEEccccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           80 CDGVFHVAASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        80 ~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      +|++||+||..... .......+.|  ...+++|+.++..+++++...  ....++|++||...+.+..           
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  149 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVF--DKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL-----------  149 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC-----------
Confidence            79999999975432 2222222333  467889999988777776532  1126899999976443211           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC-CCcc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD-SKFF  232 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~  232 (348)
                                    ....|+.+|.+.+.+++.++.+   .|+++..+.||.|..+.........-..+....... ....
T Consensus       150 --------------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (272)
T PRK08589        150 --------------YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT  215 (272)
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC
Confidence                          2246999999999999998876   379999999999977643211000000000000000 0001


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      + .++         +..++|+++++.+++...
T Consensus       216 ~-~~~---------~~~~~~va~~~~~l~s~~  237 (272)
T PRK08589        216 P-LGR---------LGKPEEVAKLVVFLASDD  237 (272)
T ss_pred             C-CCC---------CcCHHHHHHHHHHHcCch
Confidence            1 112         568999999999998753

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.6e-19  Score=160.85  Aligned_cols=209  Identities=16%  Similarity=0.119  Sum_probs=148.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++++|+||||+|+||+++++.|+++|++|++++|+..+. .... ......++.++.+|++|.+++.++++       .
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4468999999999999999999999999999999976543 2211 11122467788999999998887663       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||+|+........+...++|  ...+++|+.++.++++++.    +.+ ..++|++||...+.+.+          
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~e~~--~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~p----------  151 (330)
T PRK06139         85 IDVWVNNVGVGAVGRFEETPIEAH--EQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQP----------  151 (330)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHH--HHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCCC----------
Confidence            899999999755443333333333  4789999999998887764    333 46899999976443221          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                     ....|+.||.+.+.+.+.++.+    .+++++.+.|+.+.+|.......        . .+..  
T Consensus       152 ---------------~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~--------~-~~~~--  205 (330)
T PRK06139        152 ---------------YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGAN--------Y-TGRR--  205 (330)
T ss_pred             ---------------CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccc--------c-cccc--
Confidence                           2246999999988888877665    37999999999998885432100        0 0100  


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                      ..         ....++..+|+|++++.+++++.
T Consensus       206 ~~---------~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        206 LT---------PPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             cc---------CCCCCCCHHHHHHHHHHHHhCCC
Confidence            00         01126789999999999998764

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.83  E-value=2.6e-19  Score=151.93  Aligned_cols=208  Identities=19%  Similarity=0.209  Sum_probs=154.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC--CCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT--RSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++++++|||||+.||..+++.|+++|++|+++.|+.++. .+.....  ..-.++++.+|+++++++..+.+      
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            46678999999999999999999999999999999998765 3333221  12357889999999998877653      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       .+|++|||||........+.+++++  ..++++|+.+...|..+..    +.+ .++||.++|.+.+.+.+.       
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~--~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~p~-------  152 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEE--EEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTPY-------  152 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCcc-------
Confidence             5899999999877665445544444  6889999998888877665    344 679999999886543322       


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                        .+.|+.||...-.+-+....|   .|+.++.+.||.+.-++.... .          .+. .
T Consensus       153 ------------------~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~-~----------~~~-~  202 (265)
T COG0300         153 ------------------MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAK-G----------SDV-Y  202 (265)
T ss_pred             ------------------hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccc-c----------ccc-c
Confidence                              357999999987777776655   579999999998877654310 0          000 0


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ...         ..+-++..+|+|+..+.++++.
T Consensus       203 ~~~---------~~~~~~~~~~va~~~~~~l~~~  227 (265)
T COG0300         203 LLS---------PGELVLSPEDVAEAALKALEKG  227 (265)
T ss_pred             ccc---------chhhccCHHHHHHHHHHHHhcC
Confidence            000         1223889999999999999975

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=6.2e-19  Score=153.60  Aligned_cols=210  Identities=17%  Similarity=0.106  Sum_probs=143.0

Q ss_pred             CCCCCeEEEeCCCC--hhHHHHHHHHHHCCCeEEEEEcCCC-----------cc-cccc-ccCCCCCeEEEEccCCCcch
Q 035965            8 TGRSKTFCVTGANG--YIGSWLVKTLLERGYIVHATVRDPG-----------KL-QIFS-KWTRSDRLRLFQADLQVEGS   72 (348)
Q Consensus         8 ~~~~~~ilVtGatG--fiG~~l~~~L~~~g~~V~~~~r~~~-----------~~-~~~~-~~~~~~~~~~~~~Dl~d~~~   72 (348)
                      .+++++||||||+|  .||.+++++|+++|++|++++|++.           .. .... ......++.++.+|++|.++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            34568999999996  6999999999999999999998722           11 1100 11112368899999999988


Q ss_pred             HHHhhc-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeee
Q 035965           73 FDKAVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTIT  142 (348)
Q Consensus        73 ~~~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~  142 (348)
                      +..+++       .+|+|||+|+............+++  ...+++|+.++..+++++...   ...+++|++||...+.
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~  159 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQL--DKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG  159 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC
Confidence            766554       4799999998754333222222222  467899999999999988643   1146899999976432


Q ss_pred             ecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHH
Q 035965          143 AKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQ  219 (348)
Q Consensus       143 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~  219 (348)
                      +..                         ....|+.+|.+.|.+++.++.+   .+++++.++|+.+..+.....      
T Consensus       160 ~~~-------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~------  208 (256)
T PRK12748        160 PMP-------------------------DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE------  208 (256)
T ss_pred             CCC-------------------------CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh------
Confidence            211                         2246999999999999988766   479999999998776542211      


Q ss_pred             HHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          220 VLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                       +......   ..+ .++         +...+|+++++.+++...
T Consensus       209 -~~~~~~~---~~~-~~~---------~~~~~~~a~~~~~l~~~~  239 (256)
T PRK12748        209 -LKHHLVP---KFP-QGR---------VGEPVDAARLIAFLVSEE  239 (256)
T ss_pred             -HHHhhhc---cCC-CCC---------CcCHHHHHHHHHHHhCcc
Confidence             1011100   111 111         446799999999888753

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.83  E-value=5e-19  Score=154.99  Aligned_cols=217  Identities=15%  Similarity=0.081  Sum_probs=150.8

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      ..+.+++++||||+|+||.+++++|+++|++|++++|+..+. ..... .....++.++.+|++|.+++.++++      
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            345678999999999999999999999999999999876543 22111 1112368889999999998877664      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       .+|+|||+||........+...++|  ...+++|+.++..+++.+..    .+ .++||++||....++..        
T Consensus        86 ~~id~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  154 (265)
T PRK07097         86 GVIDILVNNAGIIKRIPMLEMSAEDF--RQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGRE--------  154 (265)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHH--HHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCCC--------
Confidence             4899999999765433223333333  47788999999888887653    33 57999999975433211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCC---c-hHHHHHhhhc
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVP---S-SIQVLLSPIT  226 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~---~-~~~~~~~~~~  226 (348)
                                       +...|+.+|.+.+.+++.++++.   +++++.++||.+..+.......   . ....+.....
T Consensus       155 -----------------~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  217 (265)
T PRK07097        155 -----------------TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFII  217 (265)
T ss_pred             -----------------CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHH
Confidence                             23469999999999999998774   8999999999998875332100   0 0000000000


Q ss_pred             CCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          227 GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      .   ..+ .+         .+...+|++.++.+++...
T Consensus       218 ~---~~~-~~---------~~~~~~dva~~~~~l~~~~  242 (265)
T PRK07097        218 A---KTP-AA---------RWGDPEDLAGPAVFLASDA  242 (265)
T ss_pred             h---cCC-cc---------CCcCHHHHHHHHHHHhCcc
Confidence            0   000 11         1668899999999998863

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.83  E-value=7.2e-19  Score=152.83  Aligned_cols=215  Identities=15%  Similarity=0.168  Sum_probs=146.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+++++++||||+|+||.+++++|+++|++|++++|+..+. .... +.....++.++.+|+.|.+++..+++       
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG   84 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45678999999999999999999999999999999976533 2111 11112357788999999988776654       


Q ss_pred             CCCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 GCDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 ~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      .+|+|||+|+.... ........++|  ...+++|+.++..+++++.    +.+ .+++|++||...+.+.+        
T Consensus        85 ~id~li~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~--------  153 (252)
T PRK07035         85 RLDILVNNAAANPYFGHILDTDLGAF--QKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPGD--------  153 (252)
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCCC--------
Confidence            48999999986432 11112222223  4689999999998887764    333 57899999975432111        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +...|+.||.+.|.+++.++++.   +++++.+.|+.+..+........ ........ ..  
T Consensus       154 -----------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~-~~--  212 (252)
T PRK07035        154 -----------------FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN-DAILKQAL-AH--  212 (252)
T ss_pred             -----------------CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC-HHHHHHHH-cc--
Confidence                             33469999999999999998763   79999999998866542221110 00111111 11  


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                       .+ .++         +...+|+++++.+++....
T Consensus       213 -~~-~~~---------~~~~~~va~~~~~l~~~~~  236 (252)
T PRK07035        213 -IP-LRR---------HAEPSEMAGAVLYLASDAS  236 (252)
T ss_pred             -CC-CCC---------cCCHHHHHHHHHHHhCccc
Confidence             11 112         5578999999999887653

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.9e-19  Score=154.30  Aligned_cols=219  Identities=16%  Similarity=0.136  Sum_probs=149.7

Q ss_pred             EEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEEEEccccC
Q 035965           15 CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGVFHVAASM   90 (348)
Q Consensus        15 lVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~Vih~a~~~   90 (348)
                      +||||+|+||+++++.|+++|++|++++|+..+. ..........+++++.+|++|.+++.++++   .+|++||+++..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            6999999999999999999999999999976543 211111112468899999999999988876   479999999975


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA  170 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  170 (348)
                      ..........+++  ...+++|+.++.+++++....+ .+++|++||...+.+.+                         
T Consensus        81 ~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~~~-------------------------  132 (230)
T PRK07041         81 PGGPVRALPLAAA--QAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRPSA-------------------------  132 (230)
T ss_pred             CCCChhhCCHHHH--HHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCCCC-------------------------
Confidence            4432222222333  5789999999999999655444 67999999987543211                         


Q ss_pred             CcchhHhhHHHHHHHHHHHHHhC-CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceee
Q 035965          171 SGWVYVLSKLLSEETAFKFANEN-KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVH  249 (348)
Q Consensus       171 ~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~  249 (348)
                      +.+.|+.+|.+.+.+.+.++.+. +++++.++|+.+-.+......+.....+......   .++ .++         +..
T Consensus       133 ~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~---~~~-~~~---------~~~  199 (230)
T PRK07041        133 SGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAE---RLP-ARR---------VGQ  199 (230)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHh---cCC-CCC---------CcC
Confidence            33579999999999999988764 5899999999886653211000000001111111   011 111         457


Q ss_pred             HHHHHHHHHHhhcCCCCCc-eEEEec
Q 035965          250 IEDICNAHIFLMENDRAQG-QYICCV  274 (348)
Q Consensus       250 v~D~a~~~~~~~~~~~~~~-~y~~~~  274 (348)
                      .+|+|+++..++..+...| .|++.+
T Consensus       200 ~~dva~~~~~l~~~~~~~G~~~~v~g  225 (230)
T PRK07041        200 PEDVANAILFLAANGFTTGSTVLVDG  225 (230)
T ss_pred             HHHHHHHHHHHhcCCCcCCcEEEeCC
Confidence            8999999999998765544 566644

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=6.9e-19  Score=152.94  Aligned_cols=221  Identities=17%  Similarity=0.172  Sum_probs=148.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      ++.++++||||+|+||.++++.|+++|++|++++|+..+. .... ......++.++.+|++|.+++.++++       .
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3467999999999999999999999999999999986543 1111 11123467889999999887766554       4


Q ss_pred             CCEEEEccccCccccc---------cccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCC
Q 035965           80 CDGVFHVAASMEFDIN---------VKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDS  146 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~---------~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~  146 (348)
                      +|+|||+|+.......         .....++|  ...+++|+.++..+++.+..    .....++|++||...+ +.. 
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~-~~~-  158 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQF--QSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA-GNM-  158 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-CCC-
Confidence            7999999996432111         11112222  45778999999877765442    2223579999987532 111 


Q ss_pred             CCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHh
Q 035965          147 SGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLS  223 (348)
Q Consensus       147 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~  223 (348)
                                              +...|+.+|.+.|.+++.++++   .+++++.++|+.+.++......+.    +..
T Consensus       159 ------------------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~----~~~  210 (253)
T PRK08217        159 ------------------------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPE----ALE  210 (253)
T ss_pred             ------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHH----HHH
Confidence                                    2346999999999999998865   589999999999988754321111    111


Q ss_pred             hhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCc-eEEEec
Q 035965          224 PITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQG-QYICCV  274 (348)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~  274 (348)
                      ......             ..+.+.+++|+++++..++......| .|++.+
T Consensus       211 ~~~~~~-------------~~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~g  249 (253)
T PRK08217        211 RLEKMI-------------PVGRLGEPEEIAHTVRFIIENDYVTGRVLEIDG  249 (253)
T ss_pred             HHHhcC-------------CcCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCC
Confidence            111110             11226789999999999997654444 455544

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.83  E-value=5.1e-19  Score=154.49  Aligned_cols=216  Identities=16%  Similarity=0.097  Sum_probs=148.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCe-EEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYI-VHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~-V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      ++.++|+||||+|+||+++++.|+++|++ |++++|+..+. ... ........+.++.+|++|++++.++++       
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            45689999999999999999999999998 99999975433 111 111122357789999999988877654       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|+|||+++............++|  ...+++|+.++.++++++.+.    +...++|++||...+.+.+         
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~---------  152 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELF--DRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP---------  152 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC---------
Confidence            5899999999754332222222223  467999999999998887542    2135799999987543221         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCC---CCchHHHHHhhhcCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSS---VPSSIQVLLSPITGD  228 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~~  228 (348)
                                      ....|+.+|...|.+.+.++.+.   +++++.++|+.++++.....   .......+.......
T Consensus       153 ----------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  216 (260)
T PRK06198        153 ----------------FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAAT  216 (260)
T ss_pred             ----------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhcc
Confidence                            22469999999999999887764   59999999999998853210   000000000110000


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                         .          ..+.+++++|+++++.+++...
T Consensus       217 ---~----------~~~~~~~~~~~a~~~~~l~~~~  239 (260)
T PRK06198        217 ---Q----------PFGRLLDPDEVARAVAFLLSDE  239 (260)
T ss_pred             ---C----------CccCCcCHHHHHHHHHHHcChh
Confidence               0          1122679999999999988654

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.83  E-value=5.9e-19  Score=153.85  Aligned_cols=227  Identities=16%  Similarity=0.114  Sum_probs=147.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccc---c-ccCCCCCeEEEEccCCCcchHHHhhc----
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIF---S-KWTRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~---~-~~~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      +++++++||||+|+||.+++++|+++|++|++++++....  ...   . +.....++.++.+|++|.+++.++++    
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999988777643211  111   0 11112368889999999988877654    


Q ss_pred             ---CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEe-ccceeeeecCCCCCCCCc
Q 035965           79 ---GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLT-SSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~-SS~~~~~~~~~~~~~~~~  153 (348)
                         ++|++||+|+............++|  ...+++|+.++..+++++... ....+++++ ||....+   . +     
T Consensus        86 ~~~~id~li~~ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~---~-~-----  154 (257)
T PRK12744         86 AFGRPDIAINTVGKVLKKPIVEISEAEY--DEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF---T-P-----  154 (257)
T ss_pred             hhCCCCEEEECCcccCCCCcccCCHHHH--HHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc---C-C-----
Confidence               5899999999754333223323333  478999999999999988753 113467766 4432111   1 0     


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       ....|+.+|.+.|.+++.++++.   +++++.++||.+.++...+..........    ....
T Consensus       155 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~----~~~~  213 (257)
T PRK12744        155 -----------------FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYH----KTAA  213 (257)
T ss_pred             -----------------CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcc----cccc
Confidence                             22469999999999999998874   69999999999977643221000000000    0000


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC--CceEEEec
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QGQYICCV  274 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~~y~~~~  274 (348)
                      ......       .+-+.+++|+++++.+++.....  +..+++.+
T Consensus       214 ~~~~~~-------~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~g  252 (257)
T PRK12744        214 ALSPFS-------KTGLTDIEDIVPFIRFLVTDGWWITGQTILING  252 (257)
T ss_pred             cccccc-------cCCCCCHHHHHHHHHHhhcccceeecceEeecC
Confidence            000011       12378999999999999985321  33455543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.82  E-value=1.1e-18  Score=151.12  Aligned_cols=210  Identities=17%  Similarity=0.146  Sum_probs=141.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcC-CCcc-c-cccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRD-PGKL-Q-IFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~-~~~~-~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      ++|.++||||+|+||++++++|+++|++|++..+. ..+. . .........++.++.+|+.|.+++.++++       +
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            45789999999999999999999999999886543 2221 1 11111122357778999999988877654       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+|+............++|  +..+++|+.++..+++++.    +.+ .+++|++||.....+..          
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~----------  148 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTREDW--TAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQF----------  148 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCCC----------
Confidence            899999999754322222222223  4789999999777666654    344 57999999975332111          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     ....|+.+|.+.+.+.+.++++   .++++..++|+.+.++......+.    ......+..   
T Consensus       149 ---------------~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~----~~~~~~~~~---  206 (246)
T PRK12938        149 ---------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPD----VLEKIVATI---  206 (246)
T ss_pred             ---------------CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChH----HHHHHHhcC---
Confidence                           2346999999999988887765   479999999999988753321111    111111111   


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                                ..+.+...+|+++++.+++...
T Consensus       207 ----------~~~~~~~~~~v~~~~~~l~~~~  228 (246)
T PRK12938        207 ----------PVRRLGSPDEIGSIVAWLASEE  228 (246)
T ss_pred             ----------CccCCcCHHHHHHHHHHHcCcc
Confidence                      1122567899999999988654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.82  E-value=1.1e-18  Score=150.25  Aligned_cols=210  Identities=15%  Similarity=0.109  Sum_probs=143.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      |+|++|||||+|+||++++++|+++|++|++++|++.+. .....    .++.++.+|+.|.+++.++++       .+|
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   76 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ----AGAQCIQADFSTNAGIMAFIDELKQHTDGLR   76 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----cCCEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence            457999999999999999999999999999999976543 11111    146789999999988776553       489


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CC--cceEEEeccceeeeecCCCCCCCCcccC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ES--VKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~--~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      ++||+|+..........+.++|  ...+++|+.++..+.+.+...   ..  ..++|++||.....+.+           
T Consensus        77 ~lv~~ag~~~~~~~~~~~~~~~--~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~-----------  143 (236)
T PRK06483         77 AIIHNASDWLAEKPGAPLADVL--ARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSD-----------  143 (236)
T ss_pred             EEEECCccccCCCcCccCHHHH--HHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCC-----------
Confidence            9999999754332222233444  578899999998877766542   11  35899999865321110           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                    ....|+.+|.+.|.+++.++++.  ++++..++|+.+.-+....  ...   .......    .+ 
T Consensus       144 --------------~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~--~~~---~~~~~~~----~~-  199 (236)
T PRK06483        144 --------------KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDD--AAY---RQKALAK----SL-  199 (236)
T ss_pred             --------------CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCC--HHH---HHHHhcc----Cc-
Confidence                          22469999999999999998874  5999999999884322111  111   0111111    11 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCCCCce
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQ  269 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~  269 (348)
                      .++         +...+|+++++.+++......|.
T Consensus       200 ~~~---------~~~~~~va~~~~~l~~~~~~~G~  225 (236)
T PRK06483        200 LKI---------EPGEEEIIDLVDYLLTSCYVTGR  225 (236)
T ss_pred             ccc---------CCCHHHHHHHHHHHhcCCCcCCc
Confidence            122         34789999999999975444554

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.82  E-value=8.4e-19  Score=152.52  Aligned_cols=220  Identities=15%  Similarity=0.104  Sum_probs=149.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++++|+||||+|+||++++++|+++|++|++++|+..+. .... ......++.++.+|++|.+++.++++       .
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4568999999999999999999999999999999986543 2111 11122468899999999988877654       4


Q ss_pred             CCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           80 CDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +|+|||+|+...... ....+.++|  ...+++|+.++..+++++.    +.+ ..++|++||...+.+.+         
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~---------  152 (253)
T PRK06172         85 LDYAFNNAGIEIEQGRLAEGSEAEF--DAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAP---------  152 (253)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCC---------
Confidence            699999999643322 112222333  4678999999987776543    333 57899999977543221         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      ....|+.+|.+.+.+.+.++.+.   ++++..+.||.|-.+......... ..........   
T Consensus       153 ----------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~-~~~~~~~~~~---  212 (253)
T PRK06172        153 ----------------KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEAD-PRKAEFAAAM---  212 (253)
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccC-hHHHHHHhcc---
Confidence                            23469999999999999988774   699999999988666432210000 0011111110   


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY  270 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y  270 (348)
                      .+ .++         +...+|+++.+.+++....  ..|.+
T Consensus       213 ~~-~~~---------~~~p~~ia~~~~~l~~~~~~~~~G~~  243 (253)
T PRK06172        213 HP-VGR---------IGKVEEVASAVLYLCSDGASFTTGHA  243 (253)
T ss_pred             CC-CCC---------ccCHHHHHHHHHHHhCccccCcCCcE
Confidence            11 111         5689999999999987642  35554

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.82  E-value=9.7e-19  Score=155.51  Aligned_cols=217  Identities=19%  Similarity=0.157  Sum_probs=149.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+.+++++||||+|.||.++++.|+++|++|++++|+..+. ...........+..+.+|++|.+++.++++       .
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            45678999999999999999999999999999999976544 222211112345667799999988876653       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|+|||+||........+.+.++|  ...+++|+.++.++++++...  ....+||++||...+.+.+            
T Consensus        86 id~vI~nAG~~~~~~~~~~~~~~~--~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  151 (296)
T PRK05872         86 IDVVVANAGIASGGSVAQVDPDAF--RRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP------------  151 (296)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC------------
Confidence            899999999765433333333444  578999999999999988642  1136899999976543221            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   ....|+.+|...+.+.+.++.+   .++.+..+.|+.+..+........ ...+.......+  .+ 
T Consensus       152 -------------~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~-~~~~~~~~~~~~--~p-  214 (296)
T PRK05872        152 -------------GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD-LPAFRELRARLP--WP-  214 (296)
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc-chhHHHHHhhCC--Cc-
Confidence                         2246999999999999888754   589999999999877643221110 000111111101  11 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      .         .-++..+|+++++..++.+.
T Consensus       215 ~---------~~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        215 L---------RRTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             c---------cCCCCHHHHHHHHHHHHhcC
Confidence            1         12668999999999998864

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.2e-18  Score=153.27  Aligned_cols=215  Identities=14%  Similarity=0.139  Sum_probs=147.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc--------cccCCCCCeEEEEccCCCcchHHHhhc-
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF--------SKWTRSDRLRLFQADLQVEGSFDKAVM-   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~--------~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   78 (348)
                      +++++++||||+|+||++++++|+++|++|++++|+.... ...        .......++.++.+|++|.+++.++++ 
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            4568999999999999999999999999999999976432 110        011122467889999999998877654 


Q ss_pred             ------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCC
Q 035965           79 ------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGE  149 (348)
Q Consensus        79 ------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~  149 (348)
                            ++|+|||+|+..........+.++|  +..+++|+.++.++++++...   ....++|++||.....  ..   
T Consensus        84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~--~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--~~---  156 (273)
T PRK08278         84 AVERFGGIDICVNNASAINLTGTEDTPMKRF--DLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD--PK---  156 (273)
T ss_pred             HHHHhCCCCEEEECCCCcCCCCcccCCHHHH--HHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc--cc---
Confidence                  6899999999755433333333333  468899999999999998642   1135788988853211  00   


Q ss_pred             CCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccc-cCCCCCCCCchHHHHHhhh
Q 035965          150 WRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVA-GPFLTSSVPSSIQVLLSPI  225 (348)
Q Consensus       150 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~-G~~~~~~~~~~~~~~~~~~  225 (348)
                               +.         ++...|+.+|.+.|.+++.++.+.   +++++.+.|+.++ .+.           . +..
T Consensus       157 ---------~~---------~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~-----------~-~~~  206 (273)
T PRK08278        157 ---------WF---------APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAA-----------V-RNL  206 (273)
T ss_pred             ---------cc---------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHH-----------H-Hhc
Confidence                     00         134579999999999999998774   7999999998422 211           0 001


Q ss_pred             cCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEE
Q 035965          226 TGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYIC  272 (348)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~  272 (348)
                      .+....            ...+...+|++++++.++....  ..|.++.
T Consensus       207 ~~~~~~------------~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~  243 (273)
T PRK08278        207 LGGDEA------------MRRSRTPEIMADAAYEILSRPAREFTGNFLI  243 (273)
T ss_pred             cccccc------------ccccCCHHHHHHHHHHHhcCccccceeEEEe
Confidence            111110            1125688999999999988643  3555544

>PRK09242 tropinone reductase; Provisional

Probab=99.82  E-value=1.6e-18  Score=151.15  Aligned_cols=214  Identities=18%  Similarity=0.153  Sum_probs=147.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cC--CCCCeEEEEccCCCcchHHHhhc-----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WT--RSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~--~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+..+. ..... ..  ...++.++.+|++|.+++..+++     
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999976543 21111 11  12367888999999987766553     


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                        ++|+|||+|+............++|  ...+.+|+.++..+++++..    .+ .+++|++||...+.+..       
T Consensus        86 ~g~id~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~-------  155 (257)
T PRK09242         86 WDGLHILVNNAGGNIRKAAIDYTEDEW--RGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHVR-------  155 (257)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCCC-------
Confidence              5799999999743222122223333  47899999999999888753    33 57899999976443211       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        +...|+.+|.+.+.+++.++.+   .+++++.++|+.+.++........ ..........  
T Consensus       156 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~-~~~~~~~~~~--  214 (257)
T PRK09242        156 ------------------SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD-PDYYEQVIER--  214 (257)
T ss_pred             ------------------CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC-hHHHHHHHhc--
Confidence                              2346999999999999988765   479999999999988754321111 0011111111  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      .  + .+.         +...+|++.++.+++...
T Consensus       215 ~--~-~~~---------~~~~~~va~~~~~l~~~~  237 (257)
T PRK09242        215 T--P-MRR---------VGEPEEVAAAVAFLCMPA  237 (257)
T ss_pred             C--C-CCC---------CcCHHHHHHHHHHHhCcc
Confidence            0  1 122         447899999999998653

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2e-18  Score=150.03  Aligned_cols=213  Identities=17%  Similarity=0.093  Sum_probs=144.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +|+++||||+|+||+++++.|+++|++|++++|+..+. ..... .....++.++.+|++|.+++.++++       .+|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            37899999999999999999999999999999986543 22111 1112468899999999988877653       579


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+|+..........+.++|  ...+++|+.++.++++++.+.    +...++|++||...+....            
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------  146 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGW--NSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGP------------  146 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHH--HHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCC------------
Confidence            9999998643222223333334  478999999999999988532    2236899999875321110            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                   ....|+.+|.+.+.+.+.++.+    +|+++..++||.+.++......... ....+....   ..+
T Consensus       147 -------------~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~-~~~~~~~~~---~~~  209 (252)
T PRK07677        147 -------------GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWES-EEAAKRTIQ---SVP  209 (252)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCC-HHHHHHHhc---cCC
Confidence                         1235999999999999987766    3799999999999854321110000 001111111   111


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                       .++         +...+|+++++.+++...
T Consensus       210 -~~~---------~~~~~~va~~~~~l~~~~  230 (252)
T PRK07677        210 -LGR---------LGTPEEIAGLAYFLLSDE  230 (252)
T ss_pred             -CCC---------CCCHHHHHHHHHHHcCcc
Confidence             122         558899999999887653

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.1e-18  Score=152.78  Aligned_cols=207  Identities=18%  Similarity=0.203  Sum_probs=145.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc------CCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM------GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d   81 (348)
                      +++++|+||||+|+||.+++++|+++|++|++++|+..+. ..........++.++.+|++|.+++.++++      .+|
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            4568999999999999999999999999999999986543 221111123478899999999988776653      579


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      +|||+||........+.+.+++  ...+++|+.++.++++.+...   ...+++|++||.....+..             
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~--~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------------  147 (263)
T PRK09072         83 VLINNAGVNHFALLEDQDPEAI--ERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP-------------  147 (263)
T ss_pred             EEEECCCCCCccccccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC-------------
Confidence            9999998754332222222222  467899999999999988642   1146899998875433211             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                                  ....|+.+|.+.+.+++.++.+   .+++++.+.|+.+..+.....        ......   ..   
T Consensus       148 ------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~--------~~~~~~---~~---  201 (263)
T PRK09072        148 ------------GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEA--------VQALNR---AL---  201 (263)
T ss_pred             ------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhh--------cccccc---cc---
Confidence                        1246999999999888888765   479999999998865532110        000000   00   


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      +        ...+.++|+|++++.++++.
T Consensus       202 ~--------~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        202 G--------NAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             c--------CCCCCHHHHHHHHHHHHhCC
Confidence            0        11568899999999999976

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.82  E-value=2.6e-18  Score=150.18  Aligned_cols=221  Identities=13%  Similarity=0.097  Sum_probs=146.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccc-cccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++++++||||+|+||.++++.|+++|++|+++.|+..+.  ... .+.....++.++.+|++|.+++.++++      
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35678999999999999999999999999999888854322  111 111123457789999999988777654      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHH----HhhcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA----CLKSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       .+|++||+|+............++|  +..+++|+.++..+++.    +.+.+..+++|++||...+.+.         
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~---------  152 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDW--NKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPW---------  152 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCC---------
Confidence             5899999999754433223322333  46789998887665554    4444324689999996532211         


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                      ++...|+.+|.+.+.+.+.++.+   .+++++.++|+.+..+......+.. . .......   
T Consensus       153 ----------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~-~~~~~~~---  211 (261)
T PRK08936        153 ----------------PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADP-K-QRADVES---  211 (261)
T ss_pred             ----------------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCH-H-HHHHHHh---
Confidence                            03346999999988888887765   3799999999999887533211110 0 0111111   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY  270 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y  270 (348)
                      ..+ .++         +...+|+++++.+++....  ..|.+
T Consensus       212 ~~~-~~~---------~~~~~~va~~~~~l~s~~~~~~~G~~  243 (261)
T PRK08936        212 MIP-MGY---------IGKPEEIAAVAAWLASSEASYVTGIT  243 (261)
T ss_pred             cCC-CCC---------CcCHHHHHHHHHHHcCcccCCccCcE
Confidence            111 122         5678999999999887543  35544

>TIGR02415 23BDH acetoin reductases

Probab=99.81  E-value=3.6e-19  Score=154.91  Aligned_cols=227  Identities=17%  Similarity=0.139  Sum_probs=148.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CCCE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   82 (348)
                      |+++||||+|+||.+++++|++.|++|+++.|+.... .... +.....++.++.+|++|.+++.++++       .+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5799999999999999999999999999999975433 2111 11123467889999999998877653       4799


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      |||+|+........+.+.++|  +..+++|+.++..+++++..    .+...++|++||....++.+             
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------  145 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEEL--KKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP-------------  145 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC-------------
Confidence            999999754332222223333  47899999999877776643    33236899999976544322             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc-
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI-  234 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-  234 (348)
                                  ....|+.+|.+.+.+++.++++.   +++++.++|+.+..+.....    ...... ..+  ..+.. 
T Consensus       146 ------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~----~~~~~~-~~~--~~~~~~  206 (254)
T TIGR02415       146 ------------ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEI----DEETSE-IAG--KPIGEG  206 (254)
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhh----hhhhhh-ccc--CchHHH
Confidence                        22469999999999999887663   79999999998866532110    000000 000  00000 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCCC--CceEEE
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QGQYIC  272 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~~y~~  272 (348)
                      ...+........+..++|+++++.+++..+..  .|.++.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~  246 (254)
T TIGR02415       207 FEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSIL  246 (254)
T ss_pred             HHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEE
Confidence            00000000112267899999999999987643  455543

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.81  E-value=1e-18  Score=170.75  Aligned_cols=237  Identities=16%  Similarity=0.096  Sum_probs=152.5

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cC--CCCCeEEEEccCCCcchHHHhhc----
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WT--RSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~--~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.... ..... ..  ....+..+.+|++|.+++.++++    
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            445678999999999999999999999999999999976543 21111 10  11256788999999998887765    


Q ss_pred             ---CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCC
Q 035965           79 ---GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                         ++|+|||+||............++|  ...+++|+.+...+++.+.    +.+...++|++||...+++.+      
T Consensus       490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~--~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~------  561 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSSPFEETTLQEW--QLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK------  561 (676)
T ss_pred             hcCCCcEEEECCCCCCCCCcccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC------
Confidence               6899999999754433333333444  4678899988877765443    333235899999976543321      


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccc-cCCCCCCCCchHHHHHhhhcC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVA-GPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                         ....|+.+|.+.+.+++.++.+   .++++..++|+.|+ |.+....  .+.... ....+
T Consensus       562 -------------------~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~--~~~~~~-~~~~~  619 (676)
T TIGR02632       562 -------------------NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDG--EWREER-AAAYG  619 (676)
T ss_pred             -------------------CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccc--cchhhh-hhccc
Confidence                               2347999999999999998876   47999999999987 4322110  000000 00000


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCV  274 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  274 (348)
                      .. .-............+.+++++|+|+++.+++....  ..| .+++.+
T Consensus       620 ~~-~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG  668 (676)
T TIGR02632       620 IP-ADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDG  668 (676)
T ss_pred             CC-hHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            00 00000000011123447899999999998876432  234 445543

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.6e-18  Score=150.14  Aligned_cols=173  Identities=14%  Similarity=0.135  Sum_probs=129.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cC-CCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WT-RSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~-~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++|+++||||+|.||.++++.|+++|++|++++|+..+. ..... .. ...++.++.+|++|.+++.++++      
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g   84 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG   84 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence            35678999999999999999999999999999999976543 21111 00 12468899999999988877765      


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      .+|++||+||........+.+.++|  ...+++|+.+...+++++.    +.+ .+++|++||.....+.+         
T Consensus        85 ~iD~lv~nag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~~---------  152 (263)
T PRK08339         85 EPDIFFFSTGGPKPGYFMEMSMEDW--EGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPIP---------  152 (263)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCCC---------
Confidence            4899999999754433334444555  5788999887776666554    344 57899999986432111         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGP  208 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~  208 (348)
                                      ....|+.+|.+.+.+.+.++.+   +|+++..+.||.|-.+
T Consensus       153 ----------------~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  193 (263)
T PRK08339        153 ----------------NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTD  193 (263)
T ss_pred             ----------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccH
Confidence                            2235999999999999998877   4799999999998665

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.81  E-value=6.7e-19  Score=157.44  Aligned_cols=185  Identities=19%  Similarity=0.072  Sum_probs=126.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc-cccc--CCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI-FSKW--TRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~-~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .+++++|+||||+|+||++++++|+++|++|++++|+..+. .. ..+.  .....+.++.+|++|.+++.++++     
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            34578999999999999999999999999999999976543 11 1111  112367889999999988877654     


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHH----HHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQS----TLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                        ++|+|||+||......  ..+.+++  +..+++|+.+    +..+++.+++.+ .++||++||...+.....      
T Consensus        93 ~~~iD~li~nAg~~~~~~--~~~~~~~--~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~------  161 (306)
T PRK06197         93 YPRIDLLINNAGVMYTPK--QTTADGF--ELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAI------  161 (306)
T ss_pred             CCCCCEEEECCccccCCC--ccCCCCc--chhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCC------
Confidence              5899999999754332  1111222  4678999999    556666666555 579999999864321111      


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEE--EecCccccCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVS--VITTTVAGPF  209 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~--lR~~~v~G~~  209 (348)
                      ..++..+..      ...+...|+.||++.+.+.+.++++.   ++++.+  +.||.|..+.
T Consensus       162 ~~~~~~~~~------~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        162 HFDDLQWER------RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             CccccCccc------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            111111100      01245689999999999999988764   555544  4799887664

>PRK07069 short chain dehydrogenase; Validated

Probab=99.81  E-value=1.2e-18  Score=151.23  Aligned_cols=210  Identities=16%  Similarity=0.137  Sum_probs=141.9

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcC-CCcc-ccccc-cCC--CCCeEEEEccCCCcchHHHhhc-------CC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRD-PGKL-QIFSK-WTR--SDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~-~~~~-~~~~~-~~~--~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +|+||||+|+||.++++.|+++|++|++++|+ .++. ..... ...  ...+.++.+|++|.+++.++++       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999997 3322 21111 000  1124467899999998876654       57


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHH----HHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQ----STLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~----~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+|+........+...+++  ...+++|+.    ++..+++.+++.+ .++||++||...+.+..           
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~-----------  146 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEW--RRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAEP-----------  146 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCCC-----------
Confidence            99999999765433222222233  467788887    7777888887766 67999999987554322           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC-----CCcEEEEecCccccCCCCCCCCch--HHHHHhhhcCCC
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN-----KIDLVSVITTTVAGPFLTSSVPSS--IQVLLSPITGDS  229 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~lR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~  229 (348)
                                    ....|+.+|.+.+.+.+.++.+.     +++++.++|+.+.++.........  ...+.....+  
T Consensus       147 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--  210 (251)
T PRK07069        147 --------------DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARG--  210 (251)
T ss_pred             --------------CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhcc--
Confidence                          22369999999999999887652     488999999999887643210000  0000011111  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                        +          ....+.+++|+++++++++..+
T Consensus       211 --~----------~~~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        211 --V----------PLGRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             --C----------CCCCCcCHHHHHHHHHHHcCcc
Confidence              1          1122568999999999987754

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.81  E-value=3.4e-18  Score=147.60  Aligned_cols=208  Identities=20%  Similarity=0.187  Sum_probs=140.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcC-CCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRD-PGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~-~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      |++|||||+|+||++++++|+++|++|+++.|. +... ... .......++.++.+|++|++++.++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            579999999999999999999999999999883 3221 111 111122468899999999988776654       489


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+|+..........+.++|  ...++.|+.++..+++.+    ++.+ .+++|++||.....+..            
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~------------  145 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQW--SAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQF------------  145 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCC------------
Confidence            9999998754332222222222  467889999988766554    4444 67999999965332111            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   ....|+.+|...+.+++.++++   .+++++.++|+.+.++......+....   .. ...   .+ 
T Consensus       146 -------------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~---~~-~~~---~~-  204 (242)
T TIGR01829       146 -------------GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLN---SI-VAQ---IP-  204 (242)
T ss_pred             -------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHH---HH-Hhc---CC-
Confidence                         2246999999999888887765   489999999999998754321111111   11 111   11 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      .+.         +...+|+++++.+++..+
T Consensus       205 ~~~---------~~~~~~~a~~~~~l~~~~  225 (242)
T TIGR01829       205 VGR---------LGRPEEIAAAVAFLASEE  225 (242)
T ss_pred             CCC---------CcCHHHHHHHHHHHcCch
Confidence            111         446789999998887654

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.80  E-value=4.2e-18  Score=147.95  Aligned_cols=198  Identities=13%  Similarity=0.078  Sum_probs=136.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCc-c-cccc-ccC-CCCCeEEEEccCCCcchHHHhhc------C
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGK-L-QIFS-KWT-RSDRLRLFQADLQVEGSFDKAVM------G   79 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~-~-~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~------~   79 (348)
                      .++|+||||+|+||.+++++|+++| ++|++++|+.++ . .... +.. ...+++++.+|+.|.+++.++++      +
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~   87 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGD   87 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCC
Confidence            6789999999999999999999995 999999998764 2 1111 111 12368899999999887655443      6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHH----HHHHHhhcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLN----LLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~----ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||++|............+  .....+++|+.++..    +++.+++.+ .++||++||...+.+  .         
T Consensus        88 id~li~~ag~~~~~~~~~~~~~--~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~--~---------  153 (253)
T PRK07904         88 VDVAIVAFGLLGDAEELWQNQR--KAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERV--R---------  153 (253)
T ss_pred             CCEEEEeeecCCchhhcccCHH--HHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCC--C---------
Confidence            9999999987543211111000  112468999988876    455666665 689999999753221  1         


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHH---hCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFAN---ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                    ++...|+.||.+...+.+.++.   .+++++++++||.+..+....            . . .   
T Consensus       154 --------------~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~------------~-~-~---  202 (253)
T PRK07904        154 --------------RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAH------------A-K-E---  202 (253)
T ss_pred             --------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhcc------------C-C-C---
Confidence                          0224699999999877666643   368999999999987652211            0 0 0   


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                          ...       .+..+|+|+.++.+++++
T Consensus       203 ----~~~-------~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        203 ----APL-------TVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             ----CCC-------CCCHHHHHHHHHHHHHcC
Confidence                011       468899999999999875

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.6e-18  Score=149.27  Aligned_cols=217  Identities=18%  Similarity=0.129  Sum_probs=141.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhcCC--------
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGC--------   80 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--------   80 (348)
                      ||+|+||||+|+||++++++|+++|++|++++|++.+.  ....  ....+++++.+|++|.+++.++++.+        
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE--QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN   78 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh--ccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence            46899999999999999999999999999999976332  1111  11246889999999998887766421        


Q ss_pred             -C--EEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCC
Q 035965           81 -D--GVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        81 -d--~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                       +  ++||+||...... ....+.++|  ...+++|+.+...+++.+.    +.+..++||++||..+....        
T Consensus        79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  148 (251)
T PRK06924         79 VSSIHLINNAGMVAPIKPIEKAESEEL--ITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPY--------  148 (251)
T ss_pred             CCceEEEEcceecccCcccccCCHHHH--HHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCC--------
Confidence             2  7899998753322 112222333  4678889888666665554    32324689999997532111        


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-----CCCcEEEEecCccccCCCCCC---CCchHHHHHhh
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-----NKIDLVSVITTTVAGPFLTSS---VPSSIQVLLSP  224 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~  224 (348)
                                       ++...|+.+|.+.+.+++.++.+     .++++..++|+.+-.+.....   ...........
T Consensus       149 -----------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  211 (251)
T PRK06924        149 -----------------FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRF  211 (251)
T ss_pred             -----------------CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHH
Confidence                             13457999999999999988765     369999999998765431100   00000000000


Q ss_pred             hcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcC-CCCCceE
Q 035965          225 ITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEN-DRAQGQY  270 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~-~~~~~~y  270 (348)
                      ..    ..+ .+.         +..++|+|++++.++.. ....|.+
T Consensus       212 ~~----~~~-~~~---------~~~~~dva~~~~~l~~~~~~~~G~~  244 (251)
T PRK06924        212 IT----LKE-EGK---------LLSPEYVAKALRNLLETEDFPNGEV  244 (251)
T ss_pred             HH----Hhh-cCC---------cCCHHHHHHHHHHHHhcccCCCCCE
Confidence            00    000 111         67899999999999886 3344543

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.79  E-value=2.5e-18  Score=148.18  Aligned_cols=205  Identities=17%  Similarity=0.183  Sum_probs=142.6

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------CCCEE
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------GCDGV   83 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~V   83 (348)
                      |+||||+|+||.++++.|+++|++|++++|+..+.  ... .+.....++.++.+|++|.+++.++++       .+|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999998764322  111 111123468899999999988876654       47999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh-----hcCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL-----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      ||+++............++|  ...+++|+.++.++++++.     +.+ .+++|++||...+++.+.            
T Consensus        81 i~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~------------  145 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDW--DIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGNRG------------  145 (239)
T ss_pred             EECCCCCCCCchhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCCCC------------
Confidence            99999754432222233333  4789999999999988753     223 468999999765543222            


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                                   ...|+.+|.+.+.+.+.++.+   .+++++.++|+.+.++..... +..   ......    ..+ .
T Consensus       146 -------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~---~~~~~~----~~~-~  203 (239)
T TIGR01831       146 -------------QVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV-EHD---LDEALK----TVP-M  203 (239)
T ss_pred             -------------CcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh-hHH---HHHHHh----cCC-C
Confidence                         235999999999888887765   479999999999987754321 111   111111    111 1


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ++         +...+|+++++.+++..+
T Consensus       204 ~~---------~~~~~~va~~~~~l~~~~  223 (239)
T TIGR01831       204 NR---------MGQPAEVASLAGFLMSDG  223 (239)
T ss_pred             CC---------CCCHHHHHHHHHHHcCch
Confidence            22         457899999999998864

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.7e-18  Score=149.65  Aligned_cols=167  Identities=19%  Similarity=0.121  Sum_probs=122.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-----------C
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-----------G   79 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----------~   79 (348)
                      ||+++||||+|+||++++++|+++|++|++++|+..+.. .  .....++.++.+|+.|.+++.++++           .
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~-~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   77 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL-A--AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS   77 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh-h--hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence            468999999999999999999999999999999764321 1  1112468889999999988877432           4


Q ss_pred             CCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           80 CDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +|++||+|+...... ....+.++|  ...+++|+.++..+++.+.+    .+ .+++|++||...+.+..         
T Consensus        78 ~~~~v~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---------  145 (243)
T PRK07023         78 RVLLINNAGTVEPIGPLATLDAAAI--ARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNAYA---------  145 (243)
T ss_pred             ceEEEEcCcccCCCCccccCCHHHH--HHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCCCC---------
Confidence            789999999754322 112222223  47889999997776666553    33 57999999976432111         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh--CCCcEEEEecCccccC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE--NKIDLVSVITTTVAGP  208 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~~lR~~~v~G~  208 (348)
                                      +...|+.+|.+.|.+++.++.+  .++++..++|+.+-.+
T Consensus       146 ----------------~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        146 ----------------GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence                            3357999999999999988865  5799999999987554

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.79  E-value=5.5e-18  Score=147.98  Aligned_cols=214  Identities=13%  Similarity=0.069  Sum_probs=139.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccC-CCCCeEEEEccCCCcchHHHhhc-----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWT-RSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .+++|+++||||+|+||+++++.|+++|++|+++.|+..+.  .... ... ...++.++.+|++|++++.++++     
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            45678999999999999999999999999998887643221  1111 111 12367899999999988877654     


Q ss_pred             --CCCEEEEccccCcc------ccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCC
Q 035965           79 --GCDGVFHVAASMEF------DINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDS  146 (348)
Q Consensus        79 --~~d~Vih~a~~~~~------~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~  146 (348)
                        .+|++||+|+....      ....+.+.++|  ...+++|+.+...+++.+.    +.+ .++||++||.......+ 
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-  160 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGL--NNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVYIE-  160 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHHH--HHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccCCC-
Confidence              47999999986421      11111222223  4677888887766555543    333 46899999965321111 


Q ss_pred             CCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHh
Q 035965          147 SGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLS  223 (348)
Q Consensus       147 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~  223 (348)
                                              ....|+.+|.+.+.+++.++.+.   |+++..+.||.+-.+..... +.. .....
T Consensus       161 ------------------------~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~-~~~-~~~~~  214 (260)
T PRK08416        161 ------------------------NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAF-TNY-EEVKA  214 (260)
T ss_pred             ------------------------CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhc-cCC-HHHHH
Confidence                                    12359999999999999998874   79999999998855421110 000 00111


Q ss_pred             hhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          224 PITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ....   ..+ .++         +..++|++.++++++...
T Consensus       215 ~~~~---~~~-~~r---------~~~p~~va~~~~~l~~~~  242 (260)
T PRK08416        215 KTEE---LSP-LNR---------MGQPEDLAGACLFLCSEK  242 (260)
T ss_pred             HHHh---cCC-CCC---------CCCHHHHHHHHHHHcChh
Confidence            1000   011 122         568999999999998754

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=1.5e-18  Score=149.48  Aligned_cols=207  Identities=19%  Similarity=0.245  Sum_probs=143.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++|+||||+|+||+++++.|+++|++|++++|++.+. ..........+++++.+|++|.+++.++++       .+
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            3468999999999999999999999999999999986544 221111112357889999999988876554       46


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      |.+||+++....... .+ .+++  ...++.|+.+...+++.+... ....++|++||....... .             
T Consensus        83 d~ii~~ag~~~~~~~-~~-~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-~-------------  144 (238)
T PRK05786         83 DGLVVTVGGYVEDTV-EE-FSGL--EEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA-S-------------  144 (238)
T ss_pred             CEEEEcCCCcCCCch-HH-HHHH--HHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC-C-------------
Confidence            999999986432221 11 1222  467899999988888877653 113579999986532210 0             


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                .+...|+.+|.+.+.+++.++++   .+++++++||++++++.....   .   . ..       ....+
T Consensus       145 ----------~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~---~---~-~~-------~~~~~  200 (238)
T PRK05786        145 ----------PDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER---N---W-KK-------LRKLG  200 (238)
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh---h---h-hh-------hcccc
Confidence                      03346999999999988888766   389999999999998743210   0   0 00       00000


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                              ..++..+|+++++..++..+.
T Consensus       201 --------~~~~~~~~va~~~~~~~~~~~  221 (238)
T PRK05786        201 --------DDMAPPEDFAKVIIWLLTDEA  221 (238)
T ss_pred             --------CCCCCHHHHHHHHHHHhcccc
Confidence                    115678999999999987543

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.79  E-value=9.8e-18  Score=144.52  Aligned_cols=204  Identities=18%  Similarity=0.136  Sum_probs=139.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc--cCCCCCeEEEEccCCCc--chHHHhh-----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK--WTRSDRLRLFQADLQVE--GSFDKAV-----   77 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~--~~~~~~~~~~~~Dl~d~--~~~~~~~-----   77 (348)
                      ++++++++||||+|+||.+++++|+++|++|++++|++.+. .....  ......+.++.+|+.+.  +++.+++     
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            35568999999999999999999999999999999987543 21111  01113466788998763  3333322     


Q ss_pred             ---cCCCEEEEccccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCC
Q 035965           78 ---MGCDGVFHVAASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        78 ---~~~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                         ..+|+|||+|+..... .....+.++|  ...+++|+.++..+++++.+.   ....++|++||.....+..     
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----  155 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEW--VNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKA-----  155 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHH--HHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCC-----
Confidence               3579999999964321 1123323333  467899999998888877542   1156899999854321110     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC----CCcEEEEecCccccCCCCCCCCchHHHHHhhhc
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN----KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPIT  226 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~  226 (348)
                                          ....|+.||.+.+.+++.++.+.    +++++.++||.|++|......+           
T Consensus       156 --------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~-----------  204 (239)
T PRK08703        156 --------------------YWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHP-----------  204 (239)
T ss_pred             --------------------CccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCC-----------
Confidence                                22469999999999999988764    5999999999999885321100           


Q ss_pred             CCCCccccccccccCCCCcceeeHHHHHHHHHHhhcC
Q 035965          227 GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEN  263 (348)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~  263 (348)
                      +.              ....+...+|++.++.+++..
T Consensus       205 ~~--------------~~~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        205 GE--------------AKSERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             CC--------------CccccCCHHHHHHHHHHHhCc
Confidence            00              011256889999999999873

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.79  E-value=9.1e-18  Score=146.87  Aligned_cols=174  Identities=22%  Similarity=0.205  Sum_probs=127.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++++||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       .+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF--GDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4568999999999999999999999999999999986544 222111  2357889999999988776654       58


Q ss_pred             CEEEEccccCcccc-ccccccccc--hhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           81 DGVFHVAASMEFDI-NVKDNIETY--VQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        81 d~Vih~a~~~~~~~-~~~~~~~~~--~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      |++||+|+...... ..+...+++  .....+++|+.++..+++++...  ....++|++||...+.+..          
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  151 (263)
T PRK06200         82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG----------  151 (263)
T ss_pred             CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC----------
Confidence            99999999753211 111111110  01467899999999988887642  1136899999987543221          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCC
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPF  209 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~  209 (348)
                                     ....|+.+|.+.+.+++.++.+.  ++++..+.||.|..+.
T Consensus       152 ---------------~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~  192 (263)
T PRK06200        152 ---------------GGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDL  192 (263)
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCC
Confidence                           22369999999999999988764  4999999999997664

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=3.1e-17  Score=146.48  Aligned_cols=170  Identities=16%  Similarity=0.072  Sum_probs=123.9

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cc-ccccCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      ..+++++++||||+|+||++++++|+++|++|++.++.....  .. ..+.....++.++.+|++|.+++.++++     
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~   87 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL   87 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            345678999999999999999999999999999998754321  11 1111122467889999999988877654     


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--------C--CcceEEEeccceeeeecCCC
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--------E--SVKRVVLTSSVSTITAKDSS  147 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--------~--~~~~~v~~SS~~~~~~~~~~  147 (348)
                       ++|+|||+||..........+.++|  ...+++|+.++.++++++...        +  ...++|++||...+.+..  
T Consensus        88 g~iD~li~nAG~~~~~~~~~~~~~~~--~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  163 (306)
T PRK07792         88 GGLDIVVNNAGITRDRMLFNMSDEEW--DAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV--  163 (306)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC--
Confidence             5899999999765433222323333  478999999999999886521        0  025899999976443221  


Q ss_pred             CCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecC
Q 035965          148 GEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITT  203 (348)
Q Consensus       148 ~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~  203 (348)
                                             ....|+.+|.+.+.+++.++.+   +|+++..+.|+
T Consensus       164 -----------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg  199 (306)
T PRK07792        164 -----------------------GQANYGAAKAGITALTLSAARALGRYGVRANAICPR  199 (306)
T ss_pred             -----------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence                                   1235999999999999988875   57999999886

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.78  E-value=5.2e-18  Score=151.91  Aligned_cols=185  Identities=17%  Similarity=0.066  Sum_probs=131.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-cc--CCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KW--TRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~--~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .+++++++||||+|+||.+++++|+++|++|++++|+..+. .... +.  ....++.++.+|+.|.+++.++++     
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~   90 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE   90 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999999986543 1111 11  112358899999999988876654     


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh---cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK---SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~---~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                        .+|++||+||....... ..+.++|  +..+.+|+.+...+++.+..   .+ ..++|++||.....+...    ...
T Consensus        91 ~~~iD~li~nAG~~~~~~~-~~t~~~~--e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~----~~~  162 (313)
T PRK05854         91 GRPIHLLINNAGVMTPPER-QTTADGF--ELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAIN----WDD  162 (313)
T ss_pred             CCCccEEEECCccccCCcc-ccCcccH--HHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcC----ccc
Confidence              48999999997643221 1122222  47899999998887777653   23 468999999875443221    012


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-----CCCcEEEEecCccccCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-----NKIDLVSVITTTVAGPF  209 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~lR~~~v~G~~  209 (348)
                      +.+....         .+...|+.||.+.+.+.+.++++     .++.+..+.||.|..+.
T Consensus       163 ~~~~~~~---------~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~  214 (313)
T PRK05854        163 LNWERSY---------AGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL  214 (313)
T ss_pred             ccccccC---------cchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence            2222211         14467999999999999988764     46999999999987654

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=2.9e-17  Score=142.70  Aligned_cols=213  Identities=16%  Similarity=0.113  Sum_probs=145.8

Q ss_pred             CCCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++|+++||||+  +.||..++++|+++|++|++++|+.... ......  ...+.++.+|++|.+++.++++      
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            3567899999999  7999999999999999999998873211 111111  1357889999999988876553      


Q ss_pred             -CCCEEEEccccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 -GCDGVFHVAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 -~~d~Vih~a~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                       .+|++||+||....    ....+.+.++|  ...+++|+.+...+++++... ....++|++||.....+.+       
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~--~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~-------  152 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGY--ALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIP-------  152 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHH--HHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCC-------
Confidence             48999999997542    11122333444  578999999999988887643 1236899999865321110       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        ....|+.+|.+.+.+.+.++.+   .|+++..+.||.|-.+........  ..+....... 
T Consensus       153 ------------------~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~--~~~~~~~~~~-  211 (252)
T PRK06079        153 ------------------NYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGH--KDLLKESDSR-  211 (252)
T ss_pred             ------------------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCCh--HHHHHHHHhc-
Confidence                              2346999999999999998876   479999999999977632211000  0111111111 


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                        .+ .++         +..++|+++++.+++...
T Consensus       212 --~p-~~r---------~~~pedva~~~~~l~s~~  234 (252)
T PRK06079        212 --TV-DGV---------GVTIEEVGNTAAFLLSDL  234 (252)
T ss_pred             --Cc-ccC---------CCCHHHHHHHHHHHhCcc
Confidence              11 122         568899999999998753

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.1e-17  Score=144.43  Aligned_cols=213  Identities=20%  Similarity=0.151  Sum_probs=146.1

Q ss_pred             CCCCeEEEeCCCC-hhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccC--CCCCeEEEEccCCCcchHHHhhc-----
Q 035965            9 GRSKTFCVTGANG-YIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWT--RSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         9 ~~~~~ilVtGatG-fiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      +++++++||||+| .||+++++.|+++|++|++++|+..+. .... +..  ...++.++.+|+++.+++.++++     
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4568999999998 699999999999999999999876533 1111 100  11357889999999988876654     


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                        .+|+|||+|+........+...++|  ...+++|+.++..+++++...    +...++|++||........       
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~-------  165 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEW--SRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQH-------  165 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC-------
Confidence              5799999999754333223223333  467889999999888877542    1135889988865321110       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        +...|+.+|.+.+.+++.++.+   +++++..++|+.+..+......+   ......+... 
T Consensus       166 ------------------~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~---~~~~~~~~~~-  223 (262)
T PRK07831        166 ------------------GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS---AELLDELAAR-  223 (262)
T ss_pred             ------------------CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC---HHHHHHHHhc-
Confidence                              2346999999999999999876   58999999999998875332111   0111111111 


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      .  + .++         +...+|+++++++++...
T Consensus       224 ~--~-~~r---------~~~p~~va~~~~~l~s~~  246 (262)
T PRK07831        224 E--A-FGR---------AAEPWEVANVIAFLASDY  246 (262)
T ss_pred             C--C-CCC---------CcCHHHHHHHHHHHcCch
Confidence            1  1 222         557899999999988764

>PRK06484 short chain dehydrogenase; Validated

Probab=99.78  E-value=1.2e-17  Score=160.27  Aligned_cols=223  Identities=17%  Similarity=0.149  Sum_probs=153.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      .+|++|||||+|.||.+++++|+++|++|++++|+..+. ......  ..++..+.+|++|.+++.++++       .+|
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL--GDEHLSVQADITDEAAVESAFAQIQARWGRLD  345 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999999976543 222111  1356778999999988877664       489


Q ss_pred             EEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           82 GVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        82 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ++||+||.... ....+.+.++|  ...+++|+.++..+++++... ....+||++||.+.+.+.+              
T Consensus       346 ~li~nAg~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------  409 (520)
T PRK06484        346 VLVNNAGIAEVFKPSLEQSAEDF--TRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALP--------------  409 (520)
T ss_pred             EEEECCCCcCCCCChhhCCHHHH--HHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCC--------------
Confidence            99999997532 22223333444  578999999999999987753 2246899999987543221              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                 +...|+.+|...+.+++.++.+.   ++++..++|+.|..+.................+    ..+ .+
T Consensus       410 -----------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~----~~~-~~  473 (520)
T PRK06484        410 -----------PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRR----RIP-LG  473 (520)
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHh----cCC-CC
Confidence                       23469999999999999988764   799999999999877432110000000111100    111 11


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCVK  275 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~~  275 (348)
                      +         +..++|+|+++++++....  ..|. +.+.+.
T Consensus       474 ~---------~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        474 R---------LGDPEEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             C---------CcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            1         5689999999999987542  3444 444433

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.78  E-value=6.7e-18  Score=143.88  Aligned_cols=169  Identities=19%  Similarity=0.169  Sum_probs=125.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhh---c--CCCEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAV---M--GCDGVF   84 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~--~~d~Vi   84 (348)
                      |++++||||+|+||++++++|+++|++|++++|+..+. .+..     .+++++.+|++|.+++.+++   .  .+|+||
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-----LGAEALALDVADPASVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-----ccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence            57899999999999999999999999999999986544 2221     24678999999998887753   2  489999


Q ss_pred             EccccCcccc--ccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           85 HVAASMEFDI--NVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        85 h~a~~~~~~~--~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      |+++......  ....+.++|  ...++.|+.++.++++++...  ....++|++||...+.+...       .      
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------~------  140 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDF--DAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT-------G------  140 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHH--HHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc-------C------
Confidence            9999753221  112123333  578999999999999988752  11357999988754432211       0      


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHhC-CCcEEEEecCccccC
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANEN-KIDLVSVITTTVAGP  208 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~v~G~  208 (348)
                               .+.+.|+.+|...+.+++.++.+. +++++.++|+.+..+
T Consensus       141 ---------~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~  180 (222)
T PRK06953        141 ---------TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTD  180 (222)
T ss_pred             ---------CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence                     022359999999999999987764 789999999988765

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.78  E-value=1.1e-17  Score=146.50  Aligned_cols=165  Identities=19%  Similarity=0.201  Sum_probs=126.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+..+..       ..++.++.+|++|.+++.++++       .+
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRI   78 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            456789999999999999999999999999999998765321       1257889999999988877654       47


Q ss_pred             CEEEEccccCccccc---------cccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCC
Q 035965           81 DGVFHVAASMEFDIN---------VKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSG  148 (348)
Q Consensus        81 d~Vih~a~~~~~~~~---------~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~  148 (348)
                      |+|||+||.......         ...+.++|  +..+++|+.++..+++++...   ....+||++||...+.+..   
T Consensus        79 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  153 (266)
T PRK06171         79 DGLVNNAGINIPRLLVDEKDPAGKYELNEAAF--DKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE---  153 (266)
T ss_pred             CEEEECCcccCCccccccccccccccCCHHHH--HHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC---
Confidence            999999996432210         11223333  468999999999999988743   1146899999976543221   


Q ss_pred             CCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccc
Q 035965          149 EWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVA  206 (348)
Q Consensus       149 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~  206 (348)
                                            ....|+.+|.+.+.+++.++.+   .++++..++||.+-
T Consensus       154 ----------------------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~  192 (266)
T PRK06171        154 ----------------------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE  192 (266)
T ss_pred             ----------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence                                  2246999999999999998876   47999999999884

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=1.1e-17  Score=145.00  Aligned_cols=204  Identities=23%  Similarity=0.246  Sum_probs=139.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccC-CCCCeEEEEccCC--CcchHHHhh-----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWT-RSDRLRLFQADLQ--VEGSFDKAV-----   77 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~-~~~~~~~~~~Dl~--d~~~~~~~~-----   77 (348)
                      ..+.++|+||||+|+||.+++++|++.|++|++++|+..+. .+.. +.. ...++.++.+|++  +.+++.+++     
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            44678999999999999999999999999999999986543 2211 111 1235677788886  444444332     


Q ss_pred             --cCCCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCC
Q 035965           78 --MGCDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        78 --~~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                        ..+|+|||+|+...... ......++|  ...+++|+.++.++++++.    +.+ .++||++||.....+..     
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~--~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~-----  160 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVW--QDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGRA-----  160 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHH--HHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCCC-----
Confidence              36899999998753321 112222223  4789999999988888775    344 67999999976432211     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          ....|+.+|.+.|.+++.++++.   +++++.++|+.+-++......+           +
T Consensus       161 --------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~-----------~  209 (247)
T PRK08945        161 --------------------NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFP-----------G  209 (247)
T ss_pred             --------------------CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcC-----------c
Confidence                                22359999999999999887764   6889999999886653211000           0


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                       .   .   .       ..+...+|++.++.+++...
T Consensus       210 -~---~---~-------~~~~~~~~~~~~~~~~~~~~  232 (247)
T PRK08945        210 -E---D---P-------QKLKTPEDIMPLYLYLMGDD  232 (247)
T ss_pred             -c---c---c-------cCCCCHHHHHHHHHHHhCcc
Confidence             0   0   0       11567899999999988654

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.78  E-value=7.4e-18  Score=147.35  Aligned_cols=172  Identities=18%  Similarity=0.192  Sum_probs=127.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++++||||+|+||++++++|+++|++|++++|+..+. .+...  ...++.++.+|+.|.+++.++++       .+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA--HGDAVVGVEGDVRSLDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh--cCCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            4568999999999999999999999999999999976543 22211  12357889999999887766554       57


Q ss_pred             CEEEEccccCccccc-cccc----cccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           81 DGVFHVAASMEFDIN-VKDN----IETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        81 d~Vih~a~~~~~~~~-~~~~----~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      |++||+||....... ....    .++|  ...+++|+.++..+++++...  ....++|++||...+.+..        
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------  150 (262)
T TIGR03325        81 DCLIPNAGIWDYSTALVDIPDDRIDEAF--DEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNG--------  150 (262)
T ss_pred             CEEEECCCCCccCCccccCCchhhhHHH--HHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCC--------
Confidence            999999986432111 0110    1123  478999999999999988753  1135799998876543211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPF  209 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~  209 (348)
                                       ....|+.+|.+.+.+++.++.+.  .+++..+.||.+..+.
T Consensus       151 -----------------~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~  191 (262)
T TIGR03325       151 -----------------GGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL  191 (262)
T ss_pred             -----------------CCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence                             22369999999999999998874  3899999999998764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.6e-17  Score=146.11  Aligned_cols=215  Identities=15%  Similarity=0.104  Sum_probs=141.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCC-CCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRS-DRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~-~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      |+++||||+|+||.++++.|+++|++|++++|+.++. .... ..... ..+.++.+|++|.+++.++++       ++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999999999999999999876433 1111 11111 124567899999888766553       479


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||++|........+.+.++|  ...+++|+.++..+++++..    .+...+||++||...+.+.+            
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~------------  146 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQW--RRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP------------  146 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC------------
Confidence            9999999754333223333333  47899999999999998742    22246899999975432111            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   ....|+.+|.+.+.+.+.++.+   .++++++++||.+.++..........       .........
T Consensus       147 -------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~-------~~~~~~~~~  206 (272)
T PRK07832        147 -------------WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGV-------DREDPRVQK  206 (272)
T ss_pred             -------------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhccccccc-------CcchhhHHH
Confidence                         2235999999888877776643   58999999999998875332100000       000000000


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ....    .....+..+|+|++++.+++++
T Consensus       207 ~~~~----~~~~~~~~~~vA~~~~~~~~~~  232 (272)
T PRK07832        207 WVDR----FRGHAVTPEKAAEKILAGVEKN  232 (272)
T ss_pred             HHHh----cccCCCCHHHHHHHHHHHHhcC
Confidence            0000    0112578999999999999743

>PRK05855 short chain dehydrogenase; Validated

Probab=99.78  E-value=1.2e-17  Score=162.42  Aligned_cols=175  Identities=15%  Similarity=0.048  Sum_probs=131.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+..+++|||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|++++.++++       
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            34567999999999999999999999999999999976543 2211 11122368899999999998877664       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      .+|+|||+||........+.+.++|  ...+++|+.|+.++++++..    .+...+||++||.+.+.+.+         
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------  460 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDW--DRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR---------  460 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC---------
Confidence            4899999999865433233333334  57889999999998887643    33236899999987543221         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPF  209 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~  209 (348)
                                      ....|+.||.+.+.+.+.++.+   .|++++.++||.|-.+.
T Consensus       461 ----------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  502 (582)
T PRK05855        461 ----------------SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNI  502 (582)
T ss_pred             ----------------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccc
Confidence                            2346999999999998888765   47999999999986653

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.78  E-value=4.3e-17  Score=127.41  Aligned_cols=202  Identities=19%  Similarity=0.175  Sum_probs=147.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccCc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASME   91 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~~   91 (348)
                      |||.|+||||.+|++|++.++++||+|++++|++.+....      +.+...+.|+.|++++.+.+.+.|+||..-+...
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~------~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~   74 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR------QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGA   74 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc------ccceeecccccChhhhHhhhcCCceEEEeccCCC
Confidence            6899999999999999999999999999999998865221      3678899999999999999999999998876543


Q ss_pred             cccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCC
Q 035965           92 FDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKAS  171 (348)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  171 (348)
                      +..          .+.    -......|++..+..+ ++|++.++.++..+-.+.    ...++-..+           |
T Consensus        75 ~~~----------~~~----~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g----~rLvD~p~f-----------P  124 (211)
T COG2910          75 SDN----------DEL----HSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEG----TRLVDTPDF-----------P  124 (211)
T ss_pred             CCh----------hHH----HHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCC----ceeecCCCC-----------c
Confidence            221          001    1333667888888878 899999999887776655    123332222           3


Q ss_pred             cchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHH
Q 035965          172 GWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIE  251 (348)
Q Consensus       172 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~  251 (348)
                      .-.|...+..+|. +..+..+.++.|+.+-|+..|-|++..+.-         ..|+........+..       +|...
T Consensus       125 ~ey~~~A~~~ae~-L~~Lr~~~~l~WTfvSPaa~f~PGerTg~y---------rlggD~ll~n~~G~S-------rIS~a  187 (211)
T COG2910         125 AEYKPEALAQAEF-LDSLRAEKSLDWTFVSPAAFFEPGERTGNY---------RLGGDQLLVNAKGES-------RISYA  187 (211)
T ss_pred             hhHHHHHHHHHHH-HHHHhhccCcceEEeCcHHhcCCccccCce---------EeccceEEEcCCCce-------eeeHH
Confidence            3346777777664 444555567999999999999998775411         123333333122223       99999


Q ss_pred             HHHHHHHHhhcCCCC
Q 035965          252 DICNAHIFLMENDRA  266 (348)
Q Consensus       252 D~a~~~~~~~~~~~~  266 (348)
                      |.|-+++.-++++..
T Consensus       188 DYAiA~lDe~E~~~h  202 (211)
T COG2910         188 DYAIAVLDELEKPQH  202 (211)
T ss_pred             HHHHHHHHHHhcccc
Confidence            999999999998865

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.8e-17  Score=138.74  Aligned_cols=191  Identities=20%  Similarity=0.169  Sum_probs=138.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~Vih~a~   88 (348)
                      |+++||||+|.||.+++++|.++ ++|++++|+..               .+.+|++|.+++.++++   ++|+|||+||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~---------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag   64 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG---------------DVQVDITDPASIRALFEKVGKVDAVVSAAG   64 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC---------------ceEecCCChHHHHHHHHhcCCCCEEEECCC
Confidence            47999999999999999999998 99999998652               36789999998888765   6899999999


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      ........+.+.++|  ...+++|+.++.++++++... ....+|+++||.....+.+                      
T Consensus        65 ~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~----------------------  120 (199)
T PRK07578         65 KVHFAPLAEMTDEDF--NVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIP----------------------  120 (199)
T ss_pred             CCCCCchhhCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCC----------------------
Confidence            754333223333333  467899999999999988653 1135799999865322111                      


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHh--CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANE--NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                         ....|+.+|.+.+.+.+.++.+  .++++..++|+.+-.+...         .     +  ..++   ..       
T Consensus       121 ---~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~---------~-----~--~~~~---~~-------  171 (199)
T PRK07578        121 ---GGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEK---------Y-----G--PFFP---GF-------  171 (199)
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhh---------h-----h--hcCC---CC-------
Confidence               2346999999999999988875  5899999999987432110         0     0  0111   11       


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEE
Q 035965          246 ALVHIEDICNAHIFLMENDRAQGQYI  271 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~~~~y~  271 (348)
                      .++..+|+|+++..+++....++.|+
T Consensus       172 ~~~~~~~~a~~~~~~~~~~~~g~~~~  197 (199)
T PRK07578        172 EPVPAARVALAYVRSVEGAQTGEVYK  197 (199)
T ss_pred             CCCCHHHHHHHHHHHhccceeeEEec
Confidence            16799999999999998764454554

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.7e-17  Score=144.67  Aligned_cols=230  Identities=13%  Similarity=0.060  Sum_probs=141.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc------CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM------GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d   81 (348)
                      |+|.++|||| |+||+++++.|. +|++|++++|+..+. .... +.....++.++.+|++|.+++.++++      .+|
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            4578999998 799999999996 899999999976543 2211 11112357889999999988877664      589


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      +|||+||......         ....++++|+.++.++++++... ...+++|++||.......................
T Consensus        79 ~li~nAG~~~~~~---------~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  149 (275)
T PRK06940         79 GLVHTAGVSPSQA---------SPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTE  149 (275)
T ss_pred             EEEECCCcCCchh---------hHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccc
Confidence            9999999753221         22488999999999999988753 1124577787765433210000000000111100


Q ss_pred             Ccchhh---c--cCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          161 PIHHVW---N--KKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       161 ~~~~~~---~--~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                      +.....   +  ...+...|+.||.+.+.+.+.++.+   .++++..+.||.+..+................+..   ..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~---~~  226 (275)
T PRK06940        150 ELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFA---KS  226 (275)
T ss_pred             cccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhh---hC
Confidence            000000   0  0013457999999999999888765   47999999999997764221100000000011111   11


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEN  263 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~  263 (348)
                      + .++         +...+|+|+++.+++..
T Consensus       227 p-~~r---------~~~peeia~~~~fL~s~  247 (275)
T PRK06940        227 P-AGR---------PGTPDEIAALAEFLMGP  247 (275)
T ss_pred             C-ccc---------CCCHHHHHHHHHHHcCc
Confidence            1 122         56899999999998864

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=5.4e-17  Score=142.39  Aligned_cols=215  Identities=13%  Similarity=0.055  Sum_probs=143.8

Q ss_pred             CCCCCeEEEeCCCC--hhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANG--YIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatG--fiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++|++|||||++  .||.+++++|+++|++|++++|+.... ....+........++.+|++|.+++.++++      
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            35678999999997  999999999999999999998864321 111111111123468999999988877654      


Q ss_pred             -CCCEEEEccccCccc----cccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 -GCDGVFHVAASMEFD----INVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                       .+|++|||||.....    ...+.+.++|  ...+++|+.++..+++++... ....++|++||.+...+.+       
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~--~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~-------  154 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENF--SRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMP-------  154 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHH--HHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCC-------
Confidence             589999999975321    1122333444  577899999999988877532 1126899999975432111       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        ....|+.+|.+.+.+.+.++.+   +|+++..+.||.|-.+.... .... .........  
T Consensus       155 ------------------~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~-~~~~-~~~~~~~~~--  212 (271)
T PRK06505        155 ------------------NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAG-IGDA-RAIFSYQQR--  212 (271)
T ss_pred             ------------------ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccccc-Ccch-HHHHHHHhh--
Confidence                              2246999999999999998877   47999999999987764221 1000 001111111  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                       ..+ .++         +...+|+++++++++...
T Consensus       213 -~~p-~~r---------~~~peeva~~~~fL~s~~  236 (271)
T PRK06505        213 -NSP-LRR---------TVTIDEVGGSALYLLSDL  236 (271)
T ss_pred             -cCC-ccc---------cCCHHHHHHHHHHHhCcc
Confidence             111 222         457899999999998753

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.77  E-value=2.6e-17  Score=143.60  Aligned_cols=171  Identities=16%  Similarity=0.126  Sum_probs=120.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~V   83 (348)
                      |+++||||+|.||++++++|+++|++|++++|++.+. ..........++.++.+|++|.+++.++++       ++|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5899999999999999999999999999999986543 211111112357889999999988877663       58999


Q ss_pred             EEccccCccc--cccccccccchhhhhhhhhHHHHHHHHHH----HhhcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           84 FHVAASMEFD--INVKDNIETYVQSTVINPAIQSTLNLLKA----CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        84 ih~a~~~~~~--~~~~~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ||+||.....  ...+...++|  ...+.+|+.+...+...    +.+.+..++||++||.....+.+            
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~------------  146 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDW--LEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMP------------  146 (259)
T ss_pred             EECCCCCCCCccccccccHHHH--HHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCC------------
Confidence            9999964321  1112222333  35567787766554443    32222246899999976432110            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCC
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPF  209 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~  209 (348)
                                   +...|+.+|.+.+.+.+.++.+.   |+++..+.||.+-.+.
T Consensus       147 -------------~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~  188 (259)
T PRK08340        147 -------------PLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPG  188 (259)
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCcc
Confidence                         23469999999999999998874   6999999999886654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.6e-17  Score=141.83  Aligned_cols=171  Identities=20%  Similarity=0.171  Sum_probs=124.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-----CCCEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-----GCDGVF   84 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~Vi   84 (348)
                      |++++||||+|+||+++++.|+++|++|++++|++.+. ....    ..++.++.+|++|.+++.++++     ++|+||
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA----LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh----ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            47899999999999999999999999999999987654 2222    1367888999999988877655     589999


Q ss_pred             EccccCcccc--ccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           85 HVAASMEFDI--NVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        85 h~a~~~~~~~--~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      |+|+......  ......+++  ...+++|+.++..+++++...  ....+++++||....  ...      +..     
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~--~~~------~~~-----  141 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEI--GQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGS--VEL------PDG-----  141 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHH--hhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccc--ccc------CCC-----
Confidence            9998753321  112222333  467889999999998887643  113578888885321  111      000     


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCC
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPF  209 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~  209 (348)
                               .+...|+.+|.+.+.+++.++.+   .++++..++||.+-.+.
T Consensus       142 ---------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        142 ---------GEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             ---------CCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence                     02235999999999999998766   46999999999886653

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.76  E-value=1.2e-16  Score=140.53  Aligned_cols=217  Identities=18%  Similarity=0.200  Sum_probs=157.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      |+|||||||||+|++++++|+++|++|+++.|++.+. .+.      .++++..+|+.++.++..+++++|.++++.+..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~   74 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL   74 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence            5799999999999999999999999999999998766 333      479999999999999999999999999998865


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA  170 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  170 (348)
                      . ...           ...........+..+++. .+ ..+++++|....-   ..                        
T Consensus        75 ~-~~~-----------~~~~~~~~~~~~~a~~a~-~~-~~~~~~~s~~~~~---~~------------------------  113 (275)
T COG0702          75 D-GSD-----------AFRAVQVTAVVRAAEAAG-AG-VKHGVSLSVLGAD---AA------------------------  113 (275)
T ss_pred             c-ccc-----------chhHHHHHHHHHHHHHhc-CC-ceEEEEeccCCCC---CC------------------------
Confidence            4 321           112222333444444444 33 6788888886521   11                        


Q ss_pred             CcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeH
Q 035965          171 SGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI  250 (348)
Q Consensus       171 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v  250 (348)
                      ....|..+|..+|..+..    .+++++++|+..+|.......      .......+.+......+..       .++..
T Consensus       114 ~~~~~~~~~~~~e~~l~~----sg~~~t~lr~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-------~~i~~  176 (275)
T COG0702         114 SPSALARAKAAVEAALRS----SGIPYTTLRRAAFYLGAGAAF------IEAAEAAGLPVIPRGIGRL-------SPIAV  176 (275)
T ss_pred             CccHHHHHHHHHHHHHHh----cCCCeEEEecCeeeeccchhH------HHHHHhhCCceecCCCCce-------eeeEH
Confidence            224699999999999887    589999999777766543321      1112222222111112233       49999


Q ss_pred             HHHHHHHHHhhcCCCC-CceEEEec-cCcChHHHHHHHHHhCCC
Q 035965          251 EDICNAHIFLMENDRA-QGQYICCV-KSCPISEFIDHLKLEYPS  292 (348)
Q Consensus       251 ~D~a~~~~~~~~~~~~-~~~y~~~~-~~~s~~el~~~i~~~~~~  292 (348)
                      +|++.++..++..+.. +..|.+++ +..+..|+++.+.+..++
T Consensus       177 ~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr  220 (275)
T COG0702         177 DDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIGR  220 (275)
T ss_pred             HHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHHHhCC
Confidence            9999999999988755 45686655 599999999999999886

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.76  E-value=7e-17  Score=142.86  Aligned_cols=220  Identities=13%  Similarity=0.076  Sum_probs=145.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC---------Ccc-ccc-cccCCCCCeEEEEccCCCcchHHHhh
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP---------GKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAV   77 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~---------~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~   77 (348)
                      +++++++||||+|.||.+++++|++.|++|++++|+.         ... ... .+.....++.++.+|++|.+++.+++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            4568999999999999999999999999999998764         211 111 11112235778899999998877655


Q ss_pred             c-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cC-----CcceEEEeccceee
Q 035965           78 M-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SE-----SVKRVVLTSSVSTI  141 (348)
Q Consensus        78 ~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-----~~~~~v~~SS~~~~  141 (348)
                      +       .+|++||+||............++|  ...+++|+.++..+++++..    ..     ...+||++||....
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  161 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEW--DAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL  161 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence            3       5799999999754332223333444  57899999999988887752    11     02589999997654


Q ss_pred             eecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchH
Q 035965          142 TAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSI  218 (348)
Q Consensus       142 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~  218 (348)
                      .+.+                         ....|+.+|.+.+.+.+.++.+   .++++..+.|+ +..+.    .... 
T Consensus       162 ~~~~-------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~----~~~~-  210 (286)
T PRK07791        162 QGSV-------------------------GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM----TETV-  210 (286)
T ss_pred             cCCC-------------------------CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc----chhh-
Confidence            3221                         1246999999999999998776   58999999997 42221    1111 


Q ss_pred             HHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC--CCCceE-EEecc
Q 035965          219 QVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQY-ICCVK  275 (348)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~y-~~~~~  275 (348)
                        +.... ...   + .+..       .+...+|+++++++++...  ...|.+ .+.+.
T Consensus       211 --~~~~~-~~~---~-~~~~-------~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG  256 (286)
T PRK07791        211 --FAEMM-AKP---E-EGEF-------DAMAPENVSPLVVWLGSAESRDVTGKVFEVEGG  256 (286)
T ss_pred             --HHHHH-hcC---c-cccc-------CCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCC
Confidence              11110 000   0 1111       2567999999999988753  235554 34333

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.6e-17  Score=144.98  Aligned_cols=172  Identities=13%  Similarity=0.065  Sum_probs=127.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccC-CCCCeEEEEccCCCcchHHHhhc---CCCE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWT-RSDRLRLFQADLQVEGSFDKAVM---GCDG   82 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~---~~d~   82 (348)
                      +++++++||||+|.||.++++.|+++|++|++++|+..+. .... +.. ...++.++.+|++|.+++..+++   .+|+
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   84 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI   84 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence            4568999999999999999999999999999999986543 2111 111 12357889999999998877664   5899


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      +||+|+............++|  ...+++|+.+...+++++.    +.+ .+++|++||.....+  .            
T Consensus        85 lv~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~--~------------  147 (259)
T PRK06125         85 LVNNAGAIPGGGLDDVDDAAW--RAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENP--D------------  147 (259)
T ss_pred             EEECCCCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCC--C------------
Confidence            999999754333333334444  5788999999988888764    333 468999998643211  1            


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccC
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGP  208 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~  208 (348)
                                 .....|+.+|.+.+.+.+.++.+   .+++++.+.||.+..+
T Consensus       148 -----------~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~  189 (259)
T PRK06125        148 -----------ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD  189 (259)
T ss_pred             -----------CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence                       02346899999999999988765   4799999999988765

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.76  E-value=6.5e-17  Score=139.43  Aligned_cols=189  Identities=15%  Similarity=0.115  Sum_probs=127.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ++++++++||||+|+||++++++|+++|++|++++|+..+. .... .   ....++.+|++|.+++.+.+.++|++||+
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~---~~~~~~~~D~~~~~~~~~~~~~iDilVnn   86 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-E---SPNEWIKWECGKEESLDKQLASLDVLILN   86 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-c---CCCeEEEeeCCCHHHHHHhcCCCCEEEEC
Confidence            35678999999999999999999999999999999976322 1111 0   12357889999999998888889999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc------CCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS------ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      ||......   .+.++|  ...+++|+.++..+++++...      +....++..||.+....  .              
T Consensus        87 AG~~~~~~---~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~--~--------------  145 (245)
T PRK12367         87 HGINPGGR---QDPENI--NKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP--A--------------  145 (245)
T ss_pred             CccCCcCC---CCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC--C--------------
Confidence            99743322   222333  478999999999999987642      11223444454332110  0              


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHH-------hCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFAN-------ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                ....|+.||.+.+.+. .+.+       ..++.+..+.|+.+..+.                 .     +
T Consensus       146 ----------~~~~Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~~-----------------~-----~  192 (245)
T PRK12367        146 ----------LSPSYEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSEL-----------------N-----P  192 (245)
T ss_pred             ----------CCchhHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCccccc-----------------C-----c
Confidence                      1235999999975433 3322       246777777776542211                 0     0


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                          ..       .+..+|+|+.++.++++..
T Consensus       193 ----~~-------~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        193 ----IG-------IMSADFVAKQILDQANLGL  213 (245)
T ss_pred             ----cC-------CCCHHHHHHHHHHHHhcCC
Confidence                01       4578999999999998654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=7.6e-17  Score=140.44  Aligned_cols=216  Identities=16%  Similarity=0.091  Sum_probs=143.7

Q ss_pred             CCCCeEEEeCCCC--hhHHHHHHHHHHCCCeEEEEEcCCC---------cc---ccc-cccCCCCCeEEEEccCCCcchH
Q 035965            9 GRSKTFCVTGANG--YIGSWLVKTLLERGYIVHATVRDPG---------KL---QIF-SKWTRSDRLRLFQADLQVEGSF   73 (348)
Q Consensus         9 ~~~~~ilVtGatG--fiG~~l~~~L~~~g~~V~~~~r~~~---------~~---~~~-~~~~~~~~~~~~~~Dl~d~~~~   73 (348)
                      +++++|+||||+|  .||.+++++|+++|++|+++.|...         ..   ... .......++.++.+|++|.+++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            4578999999995  7999999999999999988764310         00   000 0111224678899999999888


Q ss_pred             HHhhc-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeee
Q 035965           74 DKAVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTIT  142 (348)
Q Consensus        74 ~~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~  142 (348)
                      .++++       .+|+|||+|+........+.+.++|  ...+++|+.+...+.+++.    +.+ ..+||++||.....
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~  160 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEEL--DKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQG  160 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCC
Confidence            77664       4799999999754433223333334  4679999999888865543    233 46999999976321


Q ss_pred             ecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHH
Q 035965          143 AKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQ  219 (348)
Q Consensus       143 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~  219 (348)
                      +.+                         +...|+.+|.+.+.+.+.++.+   .+++++.++|+.+-.+....    .  
T Consensus       161 ~~~-------------------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~----~--  209 (256)
T PRK12859        161 PMV-------------------------GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE----E--  209 (256)
T ss_pred             CCC-------------------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH----H--
Confidence            110                         3347999999999999998866   57999999999886653211    1  


Q ss_pred             HHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEE
Q 035965          220 VLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYIC  272 (348)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~  272 (348)
                       +......   ..+ .+.         +...+|+++++.+++....  ..|.++.
T Consensus       210 -~~~~~~~---~~~-~~~---------~~~~~d~a~~~~~l~s~~~~~~~G~~i~  250 (256)
T PRK12859        210 -IKQGLLP---MFP-FGR---------IGEPKDAARLIKFLASEEAEWITGQIIH  250 (256)
T ss_pred             -HHHHHHh---cCC-CCC---------CcCHHHHHHHHHHHhCccccCccCcEEE
Confidence             1111111   111 112         4578999999999886532  2455433

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.6e-17  Score=162.37  Aligned_cols=203  Identities=18%  Similarity=0.176  Sum_probs=146.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+++|+++||||+|+||.++++.|+++|++|++++|++.+. .... ......++.++.+|++|.+++.++++       
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            35578999999999999999999999999999999986543 2211 11123468899999999998887765       


Q ss_pred             CCCEEEEccccCcccccccc--ccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 GCDGVFHVAASMEFDINVKD--NIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      ++|+|||+||..........  ..+++  ...+++|+.++.++++++.    +.+ .++||++||.+.+.+.+       
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------  517 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDY--ERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNAP-------  517 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCC-------
Confidence            58999999996432221111  11222  4778999999988877764    344 57999999987543221       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        ....|+.+|.+.+.+.+.++.+   .+++++.++||.|..+...+..               
T Consensus       518 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~---------------  564 (657)
T PRK07201        518 ------------------RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK---------------  564 (657)
T ss_pred             ------------------CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc---------------
Confidence                              2246999999999999988766   4899999999999876433210               


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                       .   .....       .+..+++|+.++.++.+.
T Consensus       565 -~---~~~~~-------~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        565 -R---YNNVP-------TISPEEAADMVVRAIVEK  588 (657)
T ss_pred             -c---ccCCC-------CCCHHHHHHHHHHHHHhC
Confidence             0   00111       568999999999987653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=6.4e-17  Score=142.01  Aligned_cols=213  Identities=15%  Similarity=0.126  Sum_probs=142.1

Q ss_pred             CCCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCC-CCCeEEEEccCCCcchHHHhhc-----
Q 035965            8 TGRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTR-SDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         8 ~~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .+++|+++||||+  +.||.++++.|+++|++|++++|+.... ........ ... .++.+|++|.+++.++++     
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~   80 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKD   80 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence            3457899999997  7999999999999999999998874211 11111110 112 578999999988876654     


Q ss_pred             --CCCEEEEccccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCC
Q 035965           79 --GCDGVFHVAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 --~~d~Vih~a~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                        .+|++||+||....    ....+.+.++|  ...+++|+.+...+++++... ....+||++||.+...+.+      
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~------  152 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAF--NIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVP------  152 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHH--HHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCC------
Confidence              57999999997532    11122333444  578999999999998877642 1136899999865321110      


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                                         ....|+.||.+.+.+.+.++.+   +|+++..+.||.|..+.... ... .........  
T Consensus       153 -------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~-~~~~~~~~~--  209 (274)
T PRK08415        153 -------------------HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASG-IGD-FRMILKWNE--  209 (274)
T ss_pred             -------------------cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhc-cch-hhHHhhhhh--
Confidence                               2246999999999999998876   47999999999987653211 000 000000000  


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcC
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEN  263 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~  263 (348)
                       ...+ .++         +...+|+++++.+++..
T Consensus       210 -~~~p-l~r---------~~~pedva~~v~fL~s~  233 (274)
T PRK08415        210 -INAP-LKK---------NVSIEEVGNSGMYLLSD  233 (274)
T ss_pred             -hhCc-hhc---------cCCHHHHHHHHHHHhhh
Confidence             0111 122         55889999999999875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=1.3e-16  Score=139.05  Aligned_cols=216  Identities=14%  Similarity=0.052  Sum_probs=143.9

Q ss_pred             CCCCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            7 STGRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         7 ~~~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      ..+++|+++||||+  +.||.+++++|+++|++|++++|+.... .........+.+.++.+|++|.+++.++++     
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   85 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE   85 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH
Confidence            34567899999998  5999999999999999999999875321 111111111235678999999988876653     


Q ss_pred             --CCCEEEEccccCccc----cccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCC
Q 035965           79 --GCDGVFHVAASMEFD----INVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                        .+|++||||+.....    ...+.+.++|  ...+++|+.+...+++.+... ....++|++||.......+      
T Consensus        86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~--~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~------  157 (258)
T PRK07533         86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGF--ALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVE------  157 (258)
T ss_pred             cCCCCEEEEcCccCCcccccCCcccCCHHHH--HHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCc------
Confidence              579999999975321    1112333444  578999999999999977542 1135899999865321100      


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                                         ....|+.+|.+.+.+.+.++.+   +++++..+.||.+-.+..... ...-. ....... 
T Consensus       158 -------------------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~-~~~~~-~~~~~~~-  215 (258)
T PRK07533        158 -------------------NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGI-DDFDA-LLEDAAE-  215 (258)
T ss_pred             -------------------cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhcc-CCcHH-HHHHHHh-
Confidence                               2346999999999999988876   479999999999876532110 00000 1111111 


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                        ..+ .++         +...+|+++++++++...
T Consensus       216 --~~p-~~r---------~~~p~dva~~~~~L~s~~  239 (258)
T PRK07533        216 --RAP-LRR---------LVDIDDVGAVAAFLASDA  239 (258)
T ss_pred             --cCC-cCC---------CCCHHHHHHHHHHHhChh
Confidence              111 122         568899999999998753

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.7e-17  Score=144.03  Aligned_cols=174  Identities=18%  Similarity=0.131  Sum_probs=126.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccC--CCCCeEEEEccCCCcchHHHhhc-----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWT--RSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .+++++++||||+|+||.++++.|+++|++|++++|++.+. .... +..  ...++.++.+|++|.+++.++++     
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            35578999999999999999999999999999999986543 2111 111  11357788999999988876553     


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                        .+|++||+||........+...++|  ...+++|+.+...+++.+.    +.+ ..++|++||.....+.+       
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------  154 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFADTTDDAW--RDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPEP-------  154 (265)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCCC-------
Confidence              5799999999754333223333334  4678889888777776654    333 57899999976432211       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPF  209 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~  209 (348)
                                        ....|+.+|.+.+.+.+.++.+   .|++++.++||.|..+.
T Consensus       155 ------------------~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  196 (265)
T PRK07062        155 ------------------HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQ  196 (265)
T ss_pred             ------------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccch
Confidence                              2236999999999888887765   47999999999987653

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.75  E-value=1e-16  Score=140.46  Aligned_cols=210  Identities=18%  Similarity=0.137  Sum_probs=135.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC-cc-cccc-ccC-CCCCeEEEEccCCCcchH----HHhh------
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG-KL-QIFS-KWT-RSDRLRLFQADLQVEGSF----DKAV------   77 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~-~~-~~~~-~~~-~~~~~~~~~~Dl~d~~~~----~~~~------   77 (348)
                      +.++||||+|+||++++++|+++|++|+++.|+.. +. .... +.. ...++.++.+|++|.+++    .+++      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999876432 22 2111 110 123566789999998754    2322      


Q ss_pred             -cCCCEEEEccccCcccccccccccc---------chhhhhhhhhHHHHHHHHHHHhhcC---------CcceEEEeccc
Q 035965           78 -MGCDGVFHVAASMEFDINVKDNIET---------YVQSTVINPAIQSTLNLLKACLKSE---------SVKRVVLTSSV  138 (348)
Q Consensus        78 -~~~d~Vih~a~~~~~~~~~~~~~~~---------~~~~~~~~~nv~~~~~ll~~~~~~~---------~~~~~v~~SS~  138 (348)
                       .++|+|||+||............++         ......+++|+.++..+++++....         ...++|++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence             2589999999975432211111110         0113678999999999988765321         12467777775


Q ss_pred             eeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCC
Q 035965          139 STITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVP  215 (348)
Q Consensus       139 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~  215 (348)
                      ....  +.                       ++...|+.||.+.+.+++.++.+   .|++++.++|+.+..+....   
T Consensus       162 ~~~~--~~-----------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~---  213 (267)
T TIGR02685       162 MTDQ--PL-----------------------LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP---  213 (267)
T ss_pred             hccC--CC-----------------------cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc---
Confidence            4211  11                       13457999999999999998777   58999999999987653221   


Q ss_pred             chHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          216 SSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ..   ........   .+ .+        ..+...+|+++++++++...
T Consensus       214 ~~---~~~~~~~~---~~-~~--------~~~~~~~~va~~~~~l~~~~  247 (267)
T TIGR02685       214 FE---VQEDYRRK---VP-LG--------QREASAEQIADVVIFLVSPK  247 (267)
T ss_pred             hh---HHHHHHHh---CC-CC--------cCCCCHHHHHHHHHHHhCcc
Confidence            11   11111111   11 11        01458899999999998764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.75  E-value=1.4e-16  Score=139.11  Aligned_cols=214  Identities=18%  Similarity=0.119  Sum_probs=140.2

Q ss_pred             CCCCeEEEeCC--CChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGA--NGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGa--tGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++++++||||  ++.||.++++.|+++|++|++..|..... ....+.........+.+|++|.+++.++++       
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            45689999997  67999999999999999999887653211 111111111234578999999998877663       


Q ss_pred             CCCEEEEccccCccccc-----cccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCC
Q 035965           79 GCDGVFHVAASMEFDIN-----VKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~-----~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                      ++|++|||||.......     .....++|  ...+++|+.+...+++.+...  ....++|++||.....+.+      
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~--~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~------  155 (261)
T PRK08690         84 GLDGLVHSIGFAPKEALSGDFLDSISREAF--NTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIP------  155 (261)
T ss_pred             CCcEEEECCccCCccccccchhhhcCHHHH--HHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCC------
Confidence            58999999997643210     11222233  456789999888887765432  1136899999876432111      


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                                         ....|+.+|.+.+.+.+.++.+   +|+++..+.||.|-.+.... ... ...........
T Consensus       156 -------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~-~~~-~~~~~~~~~~~  214 (261)
T PRK08690        156 -------------------NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG-IAD-FGKLLGHVAAH  214 (261)
T ss_pred             -------------------CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc-CCc-hHHHHHHHhhc
Confidence                               2346999999999998888755   57999999999987653211 000 00011111111


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                         .+ .++         +..++|+|+++.+++...
T Consensus       215 ---~p-~~r---------~~~peevA~~v~~l~s~~  237 (261)
T PRK08690        215 ---NP-LRR---------NVTIEEVGNTAAFLLSDL  237 (261)
T ss_pred             ---CC-CCC---------CCCHHHHHHHHHHHhCcc
Confidence               11 122         568999999999999854

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=2.2e-16  Score=137.67  Aligned_cols=214  Identities=16%  Similarity=0.116  Sum_probs=140.9

Q ss_pred             CCCCeEEEeCCCC--hhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANG--YIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatG--fiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+++||||++  .||.++++.|+++|++|++.+|+.... .........+.+.++.+|++|++++.++++       
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            4568999999985  999999999999999999888863211 111111112346678999999998887663       


Q ss_pred             CCCEEEEccccCcccc-----ccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 GCDGVFHVAASMEFDI-----NVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~-----~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      .+|++||+||......     ..+.+.++|  ...+++|+.+...+.+++... ....++|++||.+...+.+       
T Consensus        84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~-------  154 (262)
T PRK07984         84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGF--KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP-------  154 (262)
T ss_pred             CCCEEEECCccCCccccCCcchhhcCHHHH--HHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCC-------
Confidence            4799999999753221     111222333  467889999988888876532 1135899999865321110       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        ....|+.||.+.+.+.+.++.+   +++++..+.||.+-.+.... .+.. .........  
T Consensus       155 ------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~~-~~~~~~~~~--  212 (262)
T PRK07984        155 ------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG-IKDF-RKMLAHCEA--  212 (262)
T ss_pred             ------------------CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhc-CCch-HHHHHHHHH--
Confidence                              2236999999999999999876   47999999999886642111 1110 001111111  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                       ..+ .++         +...+|+++++.+++...
T Consensus       213 -~~p-~~r---------~~~pedva~~~~~L~s~~  236 (262)
T PRK07984        213 -VTP-IRR---------TVTIEDVGNSAAFLCSDL  236 (262)
T ss_pred             -cCC-CcC---------CCCHHHHHHHHHHHcCcc
Confidence             111 122         568999999999998753

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=1.9e-16  Score=138.96  Aligned_cols=222  Identities=13%  Similarity=0.058  Sum_probs=146.1

Q ss_pred             CCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+++||||+  +.||.++++.|+++|++|+++.|+.... ....+.........+.+|++|.+++.++++       
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            456899999997  8999999999999999999887753211 111111111235678999999988877654       


Q ss_pred             CCCEEEEccccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 GCDGVFHVAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      .+|++||+||....    ....+.+.++|  ...+++|+.++..+++.+... ....++|++||.....+.+        
T Consensus        88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~--~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p--------  157 (272)
T PRK08159         88 KLDFVVHAIGFSDKDELTGRYVDTSRDNF--TMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMP--------  157 (272)
T ss_pred             CCcEEEECCcccCccccccCcccCCHHHH--HHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCC--------
Confidence            48999999997532    11112333444  578999999999999987653 1136899999864321110        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       ....|+.+|.+.+.+.+.++.+   +++++..+.||.+..+.... .+. ...+......   
T Consensus       158 -----------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~-~~~~~~~~~~---  215 (272)
T PRK08159        158 -----------------HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASG-IGD-FRYILKWNEY---  215 (272)
T ss_pred             -----------------cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhc-CCc-chHHHHHHHh---
Confidence                             2346999999999999998876   47999999999987642211 010 0001111000   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEE
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYIC  272 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~  272 (348)
                      ..+ .++         +...+|+|+++++++....  ..|..+.
T Consensus       216 ~~p-~~r---------~~~peevA~~~~~L~s~~~~~itG~~i~  249 (272)
T PRK08159        216 NAP-LRR---------TVTIEEVGDSALYLLSDLSRGVTGEVHH  249 (272)
T ss_pred             CCc-ccc---------cCCHHHHHHHHHHHhCccccCccceEEE
Confidence            111 122         5688999999999997543  3555433

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.74  E-value=2.1e-16  Score=141.63  Aligned_cols=245  Identities=18%  Similarity=0.136  Sum_probs=146.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      |+++++||||++.||.+++++|+++| ++|++++|+..+. .... +......+.++.+|++|.+++.++++       +
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            46799999999999999999999999 9999999976543 2211 11112357788999999988776553       5


Q ss_pred             CCEEEEccccCccccc-cccccccchhhhhhhhhHHHHHHHHHHHhh----cC-CcceEEEeccceeeeecCCCCCCCCc
Q 035965           80 CDGVFHVAASMEFDIN-VKDNIETYVQSTVINPAIQSTLNLLKACLK----SE-SVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      +|++||+||....... ...+.++|  ...+++|+.++..+++.+..    .+ ...+||++||...+........ ..+
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~--~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~-~~~  158 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGF--ELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNV-PPK  158 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHH--HHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcC-CCc
Confidence            8999999997533211 11222333  57899999998888766543    22 1369999999875432111000 000


Q ss_pred             ccCCC-------CCCc-chhh-ccCCCcchhHhhHHHHHHHHHHHHHh----CCCcEEEEecCccccCCCCCCCCchHHH
Q 035965          154 VDESC-------QTPI-HHVW-NKKASGWVYVLSKLLSEETAFKFANE----NKIDLVSVITTTVAGPFLTSSVPSSIQV  220 (348)
Q Consensus       154 ~~E~~-------~~~~-~~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~  220 (348)
                      .+..+       +... .... ....+...|+.||++...+.+.++++    .++.++.++||.|...............
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~  238 (314)
T TIGR01289       159 ANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRT  238 (314)
T ss_pred             ccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHH
Confidence            00000       0000 0000 00124457999999988888877765    3799999999998643221110111100


Q ss_pred             HHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          221 LLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                      +.....    .   .....       +..+++.++.++.++..+.  .+|.|+
T Consensus       239 ~~~~~~----~---~~~~~-------~~~~~~~a~~l~~~~~~~~~~~~g~~~  277 (314)
T TIGR01289       239 LFPPFQ----K---YITKG-------YVSEEEAGERLAQVVSDPKLKKSGVYW  277 (314)
T ss_pred             HHHHHH----H---HHhcc-------ccchhhhhhhhHHhhcCcccCCCceee
Confidence            000000    0   00111       5678899998888777543  345564

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=4.5e-16  Score=135.82  Aligned_cols=214  Identities=14%  Similarity=0.062  Sum_probs=141.7

Q ss_pred             CCCCeEEEeCCCC--hhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANG--YIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatG--fiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+++||||++  .||.++++.|+++|++|++.+|+.... ....+........++.+|++|++++.++++       
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG   85 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4578999999997  899999999999999999988763211 111111111123457899999988877664       


Q ss_pred             CCCEEEEccccCccc----cccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 GCDGVFHVAASMEFD----INVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      .+|++||+|+.....    ...+.+.++|  ...+++|+.+...+++++... ....++|++||.....+.+        
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~--~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~--------  155 (260)
T PRK06603         86 SFDFLLHGMAFADKNELKGRYVDTSLENF--HNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIP--------  155 (260)
T ss_pred             CccEEEEccccCCcccccCccccCCHHHH--HHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCC--------
Confidence            489999999864321    1123334445  578999999999998876532 1136899999965321111        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       ....|+.||.+.+.+.+.++.+   +++++..+.||.+-.+.... ...... .......   
T Consensus       156 -----------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~~~~-~~~~~~~---  213 (260)
T PRK06603        156 -----------------NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSA-IGDFST-MLKSHAA---  213 (260)
T ss_pred             -----------------cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhc-CCCcHH-HHHHHHh---
Confidence                             2246999999999999998876   57999999999986653211 000000 1111111   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ..+ .++         +...+|+++++.+++...
T Consensus       214 ~~p-~~r---------~~~pedva~~~~~L~s~~  237 (260)
T PRK06603        214 TAP-LKR---------NTTQEDVGGAAVYLFSEL  237 (260)
T ss_pred             cCC-cCC---------CCCHHHHHHHHHHHhCcc
Confidence            111 222         558999999999999753

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.73  E-value=3.6e-16  Score=136.24  Aligned_cols=214  Identities=15%  Similarity=0.072  Sum_probs=142.7

Q ss_pred             CCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCCCcc----ccccccCCCCCeEEEEccCCCcchHHHhhc----
Q 035965            9 GRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDPGKL----QIFSKWTRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         9 ~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      +++|+++||||+  +.||.+++++|+++|++|++..|+..+.    ....+......+.++.+|++|.+++.++++    
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            456899999986  7999999999999999998887653321    111111112346788999999998876654    


Q ss_pred             ---CCCEEEEccccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCC
Q 035965           79 ---GCDGVFHVAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                         .+|++||+||....    ....+.+.++|  ...+++|+.++..+++++... ...++||++||.....+.+     
T Consensus        84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~--~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~-----  156 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEELIGDFSATSREGF--ARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIP-----  156 (258)
T ss_pred             HcCCCCEEEEcccccCcccccCcchhhCHHHH--HHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCc-----
Confidence               58999999996532    11112233344  578999999999988877542 1136899999965321110     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          ....|+.+|.+.+.+.+.++.+   .|+++..+.||.|-.+..... ..... .......
T Consensus       157 --------------------~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~-~~~~~-~~~~~~~  214 (258)
T PRK07370        157 --------------------NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAV-GGILD-MIHHVEE  214 (258)
T ss_pred             --------------------ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcc-ccchh-hhhhhhh
Confidence                                2346999999999999999876   479999999999876532110 00000 0000000


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                         ..+ .++         +...+|++.++.+++...
T Consensus       215 ---~~p-~~r---------~~~~~dva~~~~fl~s~~  238 (258)
T PRK07370        215 ---KAP-LRR---------TVTQTEVGNTAAFLLSDL  238 (258)
T ss_pred             ---cCC-cCc---------CCCHHHHHHHHHHHhChh
Confidence               111 122         557899999999998753

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=4.5e-16  Score=135.56  Aligned_cols=215  Identities=14%  Similarity=0.085  Sum_probs=142.3

Q ss_pred             CCCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC--CCCCeEEEEccCCCcchHHHhhc----
Q 035965            8 TGRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT--RSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         8 ~~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      .+++|+++||||+  +.||.+++++|+++|++|++++|+.... .......  ...++.++.+|++|.+++.++++    
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            3457899999997  8999999999999999999988753211 1111111  12467889999999988876653    


Q ss_pred             ---CCCEEEEccccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCC
Q 035965           79 ---GCDGVFHVAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                         .+|++||+|+....    ......+.++|  ...+++|+.+...+++++... ....+||++||.....+.+     
T Consensus        84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~-----  156 (257)
T PRK08594         84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGF--LLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQ-----  156 (257)
T ss_pred             hCCCccEEEECcccCCCCcCCCccccCCHHHH--HHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCC-----
Confidence               48999999986532    11112223333  467889999988888776642 1136899999975422111     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          ....|+.+|.+.+.+.+.++.+   +|+++..+.||.+-.+.... ...... ...... 
T Consensus       157 --------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~-~~~~~~-~~~~~~-  213 (257)
T PRK08594        157 --------------------NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKG-VGGFNS-ILKEIE-  213 (257)
T ss_pred             --------------------CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhh-hccccH-HHHHHh-
Confidence                                2246999999999999998876   47999999999987653211 000000 000000 


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                        ...+ .++         +...+|+++++.+++...
T Consensus       214 --~~~p-~~r---------~~~p~~va~~~~~l~s~~  238 (257)
T PRK08594        214 --ERAP-LRR---------TTTQEEVGDTAAFLFSDL  238 (257)
T ss_pred             --hcCC-ccc---------cCCHHHHHHHHHHHcCcc
Confidence              0111 122         558999999999988753

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.72  E-value=4.4e-16  Score=142.17  Aligned_cols=193  Identities=17%  Similarity=0.157  Sum_probs=127.8

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      .++++|+|+||||+|+||++++++|+++|++|++++|+..+.... .......+..+.+|++|.+++.+.+.++|++||+
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~-~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn  252 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE-INGEDLPVKTLHWQVGQEAALAELLEKVDILIIN  252 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence            345678999999999999999999999999999999876543110 0011124678899999999999988899999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CC---cceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ES---VKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~---~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ||.....   +.+.+++  ...+++|+.++.++++++...    +.   ...+|.+|++. ..  +.             
T Consensus       253 AGi~~~~---~~s~e~~--~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~~--~~-------------  311 (406)
T PRK07424        253 HGINVHG---ERTPEAI--NKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-VN--PA-------------  311 (406)
T ss_pred             CCcCCCC---CCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-cc--CC-------------
Confidence            9865322   1222222  478999999999999987542    20   12244444421 11  00             


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVS  239 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (348)
                                 ....|+.||.+.+.+......+.++.+..+.|    ||..+..             +         ...
T Consensus       312 -----------~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~----gp~~t~~-------------~---------~~~  354 (406)
T PRK07424        312 -----------FSPLYELSKRALGDLVTLRRLDAPCVVRKLIL----GPFKSNL-------------N---------PIG  354 (406)
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHhCCCCceEEEEe----CCCcCCC-------------C---------cCC
Confidence                       11359999999988754333334444444444    3322210             0         011


Q ss_pred             cCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          240 NRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       240 ~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                             .+..+|+|+.++.+++++.
T Consensus       355 -------~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        355 -------VMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             -------CCCHHHHHHHHHHHHHCCC
Confidence                   4688999999999998753

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.1e-16  Score=136.34  Aligned_cols=189  Identities=13%  Similarity=0.078  Sum_probs=136.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc----CCCEEEEc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM----GCDGVFHV   86 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~Vih~   86 (348)
                      |+++||||+|+||+++++.|+++|++|++++|+..+. .....    .+++++.+|++|.+++.++++    .+|++||+
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~   76 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE----LDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV   76 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence            3799999999999999999999999999999976543 22111    146788999999998887764    58999999


Q ss_pred             cccCcc---c--cccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           87 AASMEF---D--INVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        87 a~~~~~---~--~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      |+....   .  ....++.++|  ...+++|+.++..+++++... ....++|++||..     ..              
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~-----~~--------------  135 (223)
T PRK05884         77 PAPSWDAGDPRTYSLADTANAW--RNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN-----PP--------------  135 (223)
T ss_pred             CCccccCCCCcccchhcCHHHH--HHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC-----CC--------------
Confidence            985211   0  0111123444  588999999999999988652 1136899999854     01              


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                                ....|+.+|.+.+.+.+.++.+   +++++..+.||.+..+..            ....    ..+    
T Consensus       136 ----------~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~------------~~~~----~~p----  185 (223)
T PRK05884        136 ----------AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY------------DGLS----RTP----  185 (223)
T ss_pred             ----------CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh------------hhcc----CCC----
Confidence                      1235999999999999998876   479999999998854421            0000    011    


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                               .-.++|+++++.+++...
T Consensus       186 ---------~~~~~~ia~~~~~l~s~~  203 (223)
T PRK05884        186 ---------PPVAAEIARLALFLTTPA  203 (223)
T ss_pred             ---------CCCHHHHHHHHHHHcCch
Confidence                     116799999999988753

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=2.3e-16  Score=148.49  Aligned_cols=171  Identities=19%  Similarity=0.105  Sum_probs=125.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +++++++||||+|+||.++++.|+++|++|++++|............. -+..++.+|++|.+++.++++       ++|
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR-VGGTALALDITAPDAPARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence            356899999999999999999999999999999885432211111100 134678899999988776654       589


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC---CcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE---SVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      +|||+|+..........+.++|  ...+++|+.++.++++++....   ...+||++||...+.+..             
T Consensus       287 ~vi~~AG~~~~~~~~~~~~~~~--~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~-------------  351 (450)
T PRK08261        287 IVVHNAGITRDKTLANMDEARW--DSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR-------------  351 (450)
T ss_pred             EEEECCCcCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-------------
Confidence            9999999765433223333333  5789999999999999987632   136899999987543322             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCcccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAG  207 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G  207 (348)
                                  ....|+.+|...+.+++.++.+   .++++..+.|+.+-.
T Consensus       352 ------------~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t  391 (450)
T PRK08261        352 ------------GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIET  391 (450)
T ss_pred             ------------CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcc
Confidence                        2246999999888888887655   579999999998754

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.72  E-value=1.2e-16  Score=136.86  Aligned_cols=172  Identities=22%  Similarity=0.156  Sum_probs=126.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc-c--cccCCCCCeEEEEccCCCcchHHHhh-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI-F--SKWTRSDRLRLFQADLQVEGSFDKAV-------   77 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~-~--~~~~~~~~~~~~~~Dl~d~~~~~~~~-------   77 (348)
                      +.+|.|+|||||+.||.+++..|+++|.+++.+.|...+. .. .  ......+++.++++|++|.+++..++       
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999988888866544 22 1  11111126899999999999888665       


Q ss_pred             cCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           78 MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        78 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      .++|++|||||..........+.+++  ...+++|+.|+..+.+++..    .+ -++||.+||.....+.+.       
T Consensus        90 g~vDvLVNNAG~~~~~~~~~~~~~~~--~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~-------  159 (282)
T KOG1205|consen   90 GRVDVLVNNAGISLVGFLEDTDIEDV--RNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPF-------  159 (282)
T ss_pred             CCCCEEEecCccccccccccCcHHHH--HHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCc-------
Confidence            37999999999877444444444444  46899999999888887753    33 579999999875433222       


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEE----EEecCccccC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLV----SVITTTVAGP  208 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~----~lR~~~v~G~  208 (348)
                                        ...|..||.+.+.+...+.+|..-..+    ++-||.|--.
T Consensus       160 ------------------~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te  200 (282)
T KOG1205|consen  160 ------------------RSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETE  200 (282)
T ss_pred             ------------------ccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeec
Confidence                              236999999999999999888532222    3666665443

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.72  E-value=7.6e-16  Score=134.36  Aligned_cols=214  Identities=17%  Similarity=0.087  Sum_probs=141.2

Q ss_pred             CCCCeEEEeCC--CChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGA--NGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGa--tGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      ++.++++||||  ++.||.+++++|+++|++|+++.|..... ....+........++.+|++|++++.++++       
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            45689999996  67999999999999999999887642211 111111111223468899999998877664       


Q ss_pred             CCCEEEEccccCcccc-----ccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 GCDGVFHVAASMEFDI-----NVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~-----~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      .+|++||+||......     ..+.+.++|  ...+++|+.+...+++++... ...+++|++||.....+.+       
T Consensus        84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~--~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~-------  154 (260)
T PRK06997         84 GLDGLVHSIGFAPREAIAGDFLDGLSRENF--RIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVP-------  154 (260)
T ss_pred             CCcEEEEccccCCccccccccchhcCHHHH--HHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCC-------
Confidence            5899999999754311     112223344  477999999999998887643 2236899999875321110       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        ....|+.+|.+.+.+.+.++.+   +++++..+.||.|-.+.... ... .......+..  
T Consensus       155 ------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~-~~~~~~~~~~--  212 (260)
T PRK06997        155 ------------------NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG-IKD-FGKILDFVES--  212 (260)
T ss_pred             ------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc-ccc-hhhHHHHHHh--
Confidence                              2346999999999999998876   47999999999886642211 000 0000111111  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                       ..+ .++         +..++|+++++.+++...
T Consensus       213 -~~p-~~r---------~~~pedva~~~~~l~s~~  236 (260)
T PRK06997        213 -NAP-LRR---------NVTIEEVGNVAAFLLSDL  236 (260)
T ss_pred             -cCc-ccc---------cCCHHHHHHHHHHHhCcc
Confidence             111 122         568999999999998753

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.71  E-value=2.7e-16  Score=128.80  Aligned_cols=167  Identities=19%  Similarity=0.180  Sum_probs=121.9

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cc----ccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QI----FSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      ++++||||+|+||.+++++|+++|+ .|+++.|+.... ..    ........++.++.+|+++.+++.++++       
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999996 688888865433 11    1111122467789999999888776654       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      .+|.|||+++............+++  ...+++|+.++.++++++.+.+ .+++|++||....++..             
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~~-------------  144 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERF--AAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGNP-------------  144 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHH--HHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCCC-------------
Confidence            3699999999654332222222222  4779999999999999997766 78999999976543321             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCcccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAG  207 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G  207 (348)
                                  ....|+.+|...+.+++... ..+++++.+.|+.+-|
T Consensus       145 ------------~~~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~~  180 (180)
T smart00822      145 ------------GQANYAAANAFLDALAAHRR-ARGLPATSINWGAWAD  180 (180)
T ss_pred             ------------CchhhHHHHHHHHHHHHHHH-hcCCceEEEeeccccC
Confidence                        22469999999999986654 4689999999887643

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.71  E-value=1.8e-16  Score=142.07  Aligned_cols=200  Identities=15%  Similarity=0.123  Sum_probs=137.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCC--CCCeEEEEccCCC--cchHH---Hhhc--
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTR--SDRLRLFQADLQV--EGSFD---KAVM--   78 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~--~~~~~~~~~Dl~d--~~~~~---~~~~--   78 (348)
                      .++.++||||||+||.+++++|+++|++|++++|++++. .... +...  ..++..+.+|+++  .+.+.   +.+.  
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            468999999999999999999999999999999987644 2211 1111  1256778899985  22233   2333  


Q ss_pred             CCCEEEEccccCccc--cccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 GCDGVFHVAASMEFD--INVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~--~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      ++|++||+||.....  ...+.+.+++  ...+++|+.++..+++++..    .+ .+++|++||...+.....      
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~------  202 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELL--KNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPSD------  202 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHH--HHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCC------
Confidence            356999999975421  1112222223  47899999999999988753    34 578999999765321111      


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                       +....|+.||.+.+.+.+.++.+   .|+++..+.||.|-.+....             ..  
T Consensus       203 -----------------p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~-------------~~--  250 (320)
T PLN02780        203 -----------------PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI-------------RR--  250 (320)
T ss_pred             -----------------ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc-------------cC--
Confidence                             02347999999999999998876   47999999999886553210             00  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEN  263 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~  263 (348)
                      .      ...       ....+++|+.++..+..
T Consensus       251 ~------~~~-------~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        251 S------SFL-------VPSSDGYARAALRWVGY  271 (320)
T ss_pred             C------CCC-------CCCHHHHHHHHHHHhCC
Confidence            0      000       24689999999998864

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=1.7e-15  Score=131.95  Aligned_cols=218  Identities=18%  Similarity=0.107  Sum_probs=143.0

Q ss_pred             CCCCeEEEeCC--CChhHHHHHHHHHHCCCeEEEEEcCCC-cc--ccccccCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            9 GRSKTFCVTGA--NGYIGSWLVKTLLERGYIVHATVRDPG-KL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         9 ~~~~~ilVtGa--tGfiG~~l~~~L~~~g~~V~~~~r~~~-~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      +++++++||||  ++.||.+++++|+++|++|++++|+.. +.  ......  ...+.++.+|++|.+++.++++     
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~   82 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL--PEPAPVLELDVTNEEHLASLADRVREH   82 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc--CCCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence            45689999999  899999999999999999999987642 11  111111  1256789999999988876653     


Q ss_pred             --CCCEEEEccccCccc----cccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCC
Q 035965           79 --GCDGVFHVAASMEFD----INVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                        ++|++||+||.....    .....+.++|  ...+++|+.++..+++.+... ....++|++|+....   ..     
T Consensus        83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~--~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~---~~-----  152 (256)
T PRK07889         83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDV--ATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV---AW-----  152 (256)
T ss_pred             cCCCcEEEEccccccccccCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc---cC-----
Confidence              589999999975321    1112223333  467899999999888877642 113578888754311   01     


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                                        +....|+.||.+.+.+.+.++.+   +|+++..+.||.+-.+..... +.. ......+.. 
T Consensus       153 ------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-~~~-~~~~~~~~~-  211 (256)
T PRK07889        153 ------------------PAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI-PGF-ELLEEGWDE-  211 (256)
T ss_pred             ------------------CccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcc-cCc-HHHHHHHHh-
Confidence                              02245999999999999998876   579999999999876532210 000 001111111 


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY  270 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y  270 (348)
                        ..+ .+        +-+...+|+|+++++++....  ..|.+
T Consensus       212 --~~p-~~--------~~~~~p~evA~~v~~l~s~~~~~~tG~~  244 (256)
T PRK07889        212 --RAP-LG--------WDVKDPTPVARAVVALLSDWFPATTGEI  244 (256)
T ss_pred             --cCc-cc--------cccCCHHHHHHHHHHHhCcccccccceE
Confidence              011 11        125689999999999987643  24544

>PRK05599 hypothetical protein; Provisional

Probab=99.70  E-value=1.2e-15  Score=132.02  Aligned_cols=204  Identities=14%  Similarity=0.105  Sum_probs=136.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCC-CCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTR-SDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~-~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      |+++||||++.||.+++++|. +|++|++++|+..+. .... +... ...+.++.+|+.|.+++.++++       .+|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999998 599999999976544 2211 1111 1247789999999988876543       589


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHH----HhhcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA----CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ++||+||........+...+++  ....++|+.+...+++.    +.+.+..+++|++||.....+.+            
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~------------  145 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHA--VEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARR------------  145 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHH--HHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCc------------
Confidence            9999999754322111111111  24567777777655544    33332236899999976432111            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   ....|+.+|.+.+.+.+.++.+   .++++..+.||.|..+.....               . ..+ 
T Consensus       146 -------------~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~---------------~-~~~-  195 (246)
T PRK05599        146 -------------ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM---------------K-PAP-  195 (246)
T ss_pred             -------------CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC---------------C-CCC-
Confidence                         2236999999999999988876   479999999998876531110               0 000 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEE
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYI  271 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~  271 (348)
                          .       ....+|+|++++.++.++...+.+.
T Consensus       196 ----~-------~~~pe~~a~~~~~~~~~~~~~~~~~  221 (246)
T PRK05599        196 ----M-------SVYPRDVAAAVVSAITSSKRSTTLW  221 (246)
T ss_pred             ----C-------CCCHHHHHHHHHHHHhcCCCCceEE
Confidence                0       2368999999999999865434443

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.70  E-value=3.3e-15  Score=128.42  Aligned_cols=204  Identities=16%  Similarity=0.137  Sum_probs=136.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhh---cCCCEEEEc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAV---MGCDGVFHV   86 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~~~d~Vih~   86 (348)
                      |+|+||||+|+||++++++|+++|  +.|....|+.... .     ...++.++++|++|.+++.++.   .++|+|||+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-~-----~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~   74 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-F-----QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINC   74 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-c-----ccCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            589999999999999999999985  5666666644321 1     1236788999999998776643   478999999


Q ss_pred             cccCcccc------ccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           87 AASMEFDI------NVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        87 a~~~~~~~------~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ||......      ......+.|  ...+.+|+.++..+++.+...   +...+++++||...  ....          .
T Consensus        75 aG~~~~~~~~~~~~~~~~~~~~~--~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~--~~~~----------~  140 (235)
T PRK09009         75 VGMLHTQDKGPEKSLQALDADFF--LQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG--SISD----------N  140 (235)
T ss_pred             CccccccccCcccccccCCHHHH--HHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc--cccc----------C
Confidence            99864321      011111112  367889999888888877642   12468999987431  1111          0


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                      ..          ++...|+.+|.+.+.+++.++.+     .++++..+.||.+..+....        +.       ...
T Consensus       141 ~~----------~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~--------~~-------~~~  195 (235)
T PRK09009        141 RL----------GGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP--------FQ-------QNV  195 (235)
T ss_pred             CC----------CCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc--------hh-------hcc
Confidence            00          13347999999999999998865     37889999999887664321        00       001


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY  270 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y  270 (348)
                      +          ...++..+|+++++..++....  ..|.+
T Consensus       196 ~----------~~~~~~~~~~a~~~~~l~~~~~~~~~g~~  225 (235)
T PRK09009        196 P----------KGKLFTPEYVAQCLLGIIANATPAQSGSF  225 (235)
T ss_pred             c----------cCCCCCHHHHHHHHHHHHHcCChhhCCcE
Confidence            1          1125689999999999998753  24444

>PRK06484 short chain dehydrogenase; Validated

Probab=99.69  E-value=1.6e-15  Score=145.68  Aligned_cols=171  Identities=16%  Similarity=0.149  Sum_probs=128.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      ++|+++||||++.||.+++++|+++|++|++++|+..+. ......  ..++.++.+|++|++++.++++       .+|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL--GPDHHALAMDVSDEAQIREGFEQLHREFGRID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999999999976543 222111  2356789999999988877654       489


Q ss_pred             EEEEccccCcc--ccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           82 GVFHVAASMEF--DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        82 ~Vih~a~~~~~--~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      ++||+||....  ....+.+.++|  ...+++|+.++..+++++...    +...++|++||.....+.+          
T Consensus        82 ~li~nag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~----------  149 (520)
T PRK06484         82 VLVNNAGVTDPTMTATLDTTLEEF--ARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP----------  149 (520)
T ss_pred             EEEECCCcCCCCCcccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC----------
Confidence            99999987322  11122333334  578999999999999888653    3124899999976543221          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCC
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPF  209 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~  209 (348)
                                     ....|+.+|.+.+.+.+.++.+   .+++++.++|+.|-.+.
T Consensus       150 ---------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~  191 (520)
T PRK06484        150 ---------------KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM  191 (520)
T ss_pred             ---------------CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence                           1236999999999999988876   47999999999886654

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.68  E-value=1.1e-15  Score=123.24  Aligned_cols=279  Identities=18%  Similarity=0.165  Sum_probs=172.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHH-----HHHHCC----CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcC
Q 035965            9 GRSKTFCVTGANGYIGSWLVK-----TLLERG----YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMG   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   79 (348)
                      .+..+.++-+++|+|+..|.-     ++-+.+    |+|++++|++.+.          ++.+...|..-.-      -.
T Consensus        10 ~~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~----------ritw~el~~~Gip------~s   73 (315)
T KOG3019|consen   10 GKSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA----------RITWPELDFPGIP------IS   73 (315)
T ss_pred             CccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc----------ccccchhcCCCCc------ee
Confidence            345678889999999988876     554444    8999999998765          2333333322211      02


Q ss_pred             CCEEEEccccCccccccccccccch---hhhhhhhhHHHHHHHHHHHhhcCC-cceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYV---QSTVINPAIQSTLNLLKACLKSES-VKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      ++..+++++....     ..+..|.   ..+.....+..|..|.++...... .+-+|.+|..+.|-.+..     ..++
T Consensus        74 c~a~vna~g~n~l-----~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s-----~eY~  143 (315)
T KOG3019|consen   74 CVAGVNAVGNNAL-----LPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSES-----QEYS  143 (315)
T ss_pred             hHHHHhhhhhhcc-----CchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccc-----cccc
Confidence            3444444442211     1111221   123444456678888888887653 346888888875544333     5677


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                      |+...-         ..+....--+.=|.......+  +.+.+++|.|.|.|.+.... ...+. ..++        ..-
T Consensus       144 e~~~~q---------gfd~~srL~l~WE~aA~~~~~--~~r~~~iR~GvVlG~gGGa~-~~M~l-pF~~--------g~G  202 (315)
T KOG3019|consen  144 EKIVHQ---------GFDILSRLCLEWEGAALKANK--DVRVALIRIGVVLGKGGGAL-AMMIL-PFQM--------GAG  202 (315)
T ss_pred             cccccC---------ChHHHHHHHHHHHHHhhccCc--ceeEEEEEEeEEEecCCcch-hhhhh-hhhh--------ccC
Confidence            776421         222222211122333333222  48999999999999876532 11111 1111        123


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCC---CCCCcc-----cCCCCC--
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPS---SKMQTF-----EGENQS--  304 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~---~~~~~~-----~~~~~~--  304 (348)
                      |..++|.|.++|||++|++..|..+++++...|+.|.. .++.+..|+++.+.+++++   .++|..     ++..+.  
T Consensus       203 GPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~  282 (315)
T KOG3019|consen  203 GPLGSGQQWFPWIHVDDLVNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATV  282 (315)
T ss_pred             CcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeE
Confidence            44457779999999999999999999999889998875 6799999999999999986   333322     222221  


Q ss_pred             -CCccccChHHHHHcCCcccc-ChhHHHHHHH
Q 035965          305 -SVPSVISSEKLKDLGFNYKH-GIEDIICQTI  334 (348)
Q Consensus       305 -~~~~~~~~~~~~~LG~~p~~-~~~e~l~~~~  334 (348)
                       -+....-..|+.++||+++| .++|+++++.
T Consensus       283 vLeGqKV~Pqral~~Gf~f~yp~vk~Al~~i~  314 (315)
T KOG3019|consen  283 VLEGQKVLPQRALELGFEFKYPYVKDALRAIM  314 (315)
T ss_pred             EeeCCcccchhHhhcCceeechHHHHHHHHHh
Confidence             12223345667789999999 8899988764

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.66  E-value=8.2e-15  Score=124.43  Aligned_cols=206  Identities=13%  Similarity=0.087  Sum_probs=147.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .-+++.||||||.+.+|+.++.+|+++|.++.+.|.+.... +..+.......+..+.+|++|.+++.+..+       +
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~  114 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD  114 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            34578999999999999999999999999999999876544 222222111368899999999988766543       6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||+||......-.+-+.++.  +..+++|+.+.....++.    .+.+ .+++|-++|....-+...         
T Consensus       115 V~ILVNNAGI~~~~~ll~~~d~ei--~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~~g---------  182 (300)
T KOG1201|consen  115 VDILVNNAGIVTGKKLLDCSDEEI--QKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGPAG---------  182 (300)
T ss_pred             ceEEEeccccccCCCccCCCHHHH--HHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCCcc---------
Confidence            899999999877665444322222  568899988776655544    4444 679999999875544333         


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh------CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE------NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                      ..+|+.||.++.-+.+.+..+      .|++.+.+.|+.+=-..-               .+ .
T Consensus       183 ----------------l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf---------------~~-~  230 (300)
T KOG1201|consen  183 ----------------LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMF---------------DG-A  230 (300)
T ss_pred             ----------------chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccccc---------------CC-C
Confidence                            236999999999888887644      369999999987642111               11 1


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA  266 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~  266 (348)
                      .+.+         .....+..+-+|+.++.++..++.
T Consensus       231 ~~~~---------~l~P~L~p~~va~~Iv~ai~~n~~  258 (300)
T KOG1201|consen  231 TPFP---------TLAPLLEPEYVAKRIVEAILTNQA  258 (300)
T ss_pred             CCCc---------cccCCCCHHHHHHHHHHHHHcCCc
Confidence            1111         122388999999999999987754

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.66  E-value=9.5e-16  Score=133.54  Aligned_cols=169  Identities=17%  Similarity=0.128  Sum_probs=120.4

Q ss_pred             eEEEeCCCChhHHHHHHHHHH----CCCeEEEEEcCCCcc-cccc-ccC--CCCCeEEEEccCCCcchHHHhhcC-----
Q 035965           13 TFCVTGANGYIGSWLVKTLLE----RGYIVHATVRDPGKL-QIFS-KWT--RSDRLRLFQADLQVEGSFDKAVMG-----   79 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~----~g~~V~~~~r~~~~~-~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~~-----   79 (348)
                      .++||||+|.||.+++++|++    .|++|++++|+.... .... +..  ...++.++.+|++|.+++.++++.     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999997    799999999976543 2111 111  123578899999999888766531     


Q ss_pred             ------CCEEEEccccCcccc-ccc--cccccchhhhhhhhhHHHHHHHHHHHhhc-----CCcceEEEeccceeeeecC
Q 035965           80 ------CDGVFHVAASMEFDI-NVK--DNIETYVQSTVINPAIQSTLNLLKACLKS-----ESVKRVVLTSSVSTITAKD  145 (348)
Q Consensus        80 ------~d~Vih~a~~~~~~~-~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~~~v~~SS~~~~~~~~  145 (348)
                            .|+|||+||...... ...  ...++|  ...+++|+.++..+++.+...     +..+++|++||...+.+.+
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~--~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~  159 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQV--QNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFK  159 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHH--HHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCC
Confidence                  258999999643211 111  112233  478999999988887766532     2135899999976432111


Q ss_pred             CCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccC
Q 035965          146 SSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGP  208 (348)
Q Consensus       146 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~  208 (348)
                                               ....|+.||.+.+.+.+.++.+   .++++..+.||.|-.+
T Consensus       160 -------------------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~  200 (256)
T TIGR01500       160 -------------------------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD  200 (256)
T ss_pred             -------------------------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence                                     2346999999999999998776   4799999999988654

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.6e-15  Score=127.24  Aligned_cols=170  Identities=14%  Similarity=0.066  Sum_probs=120.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc--------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM--------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~--------   78 (348)
                      +++++++||||++.||.++++.|+++|++|++++|+..+. .... ......++..+.+|+.|.+++.++++        
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4568999999999999999999999999999999977543 2211 11112356788899999988876542        


Q ss_pred             CCCEEEEccccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 GCDGVFHVAASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      .+|++||+||..... ...+.+.++|  ...+++|+.+...+++.+.    +.+..+.+|++||....   +        
T Consensus        83 ~iD~li~nag~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~--------  149 (227)
T PRK08862         83 APDVLVNNWTSSPLPSLFDEQPSESF--IQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---Q--------  149 (227)
T ss_pred             CCCEEEECCccCCCCCccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---C--------
Confidence            589999999754322 2122222333  3456778877776655443    33224689999985321   0        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGP  208 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~  208 (348)
                                       +...|+.+|.+.+.+.+.++.+   +++++..+.||.+-.+
T Consensus       150 -----------------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        150 -----------------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             -----------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence                             1235999999999999998876   5799999999987766

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.66  E-value=3.9e-15  Score=132.64  Aligned_cols=176  Identities=18%  Similarity=0.063  Sum_probs=121.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc----------c-cccc-ccCCCCCeEEEEccCCCcchHHHh
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK----------L-QIFS-KWTRSDRLRLFQADLQVEGSFDKA   76 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~----------~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~   76 (348)
                      +++|+++||||++.||.+++++|++.|++|++++|+..+          . .... +.....++.++.+|++|.+++.++
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            456899999999999999999999999999999997421          1 1111 111123567889999999888766


Q ss_pred             hc-------CCCEEEEcc-ccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceee
Q 035965           77 VM-------GCDGVFHVA-ASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTI  141 (348)
Q Consensus        77 ~~-------~~d~Vih~a-~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~  141 (348)
                      ++       .+|++||+| +....    ....+.+.++|  ...+++|+.+...+++++...   ....+||++||....
T Consensus        86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~  163 (305)
T PRK08303         86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKG--LRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAE  163 (305)
T ss_pred             HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHH--HHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccc
Confidence            54       589999999 63210    11112222333  466788998888887776542   113689999985432


Q ss_pred             eecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccC
Q 035965          142 TAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGP  208 (348)
Q Consensus       142 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~  208 (348)
                      .....       .               .....|+.+|.+...+.+.++.+.   ++++..+.||.|-.+
T Consensus       164 ~~~~~-------~---------------~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~  211 (305)
T PRK08303        164 YNATH-------Y---------------RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE  211 (305)
T ss_pred             ccCcC-------C---------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence            11100       0               012369999999999999888763   799999999987554

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.66  E-value=6e-16  Score=125.72  Aligned_cols=153  Identities=22%  Similarity=0.176  Sum_probs=117.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcC--CCcc-cc-ccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG-YIVHATVRD--PGKL-QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~--~~~~-~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      |+++||||+|-||..++++|+++| +.|+++.|+  .+.. .. ..+.....++.++.+|+++.+++..+++       .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            579999999999999999999994 578888887  2222 22 1122233678999999999988877764       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      +|++||+|+........+...++|  ...++.|+.+...+.+++...+ .+++|++||.....+.+              
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~--------------  143 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEEL--ERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRGSP--------------  143 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHH--HHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSSST--------------
T ss_pred             ccccccccccccccccccccchhh--hhccccccceeeeeeehheecc-ccceEEecchhhccCCC--------------
Confidence            899999999877444333333444  5889999999999999998844 78999999987543222              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE  192 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~  192 (348)
                                 ....|+.+|.+.+.+.+.++++
T Consensus       144 -----------~~~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  144 -----------GMSAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CChhHHHHHHHHHHHHHHHHHh
Confidence                       2347999999999999998875

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.66  E-value=1.3e-14  Score=126.03  Aligned_cols=220  Identities=20%  Similarity=0.180  Sum_probs=151.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc----ccccCCCCCeEEEEccCCCcchHHHhhc----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI----FSKWTRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      ...+|.++||||+..||.++|+.|++.|.+|++++|+.+.. ..    .......+.+..+.+|+++.++..++++    
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999987643 11    1111123468899999998876655442    


Q ss_pred             ----CCCEEEEccccCccc-cccccccccchhhhhhhhhHHH-HHHHHHHHhhc---CCcceEEEeccceeeeecCCCCC
Q 035965           79 ----GCDGVFHVAASMEFD-INVKDNIETYVQSTVINPAIQS-TLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGE  149 (348)
Q Consensus        79 ----~~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~-~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~  149 (348)
                          ++|++||+||..... ...+.+.++|  +..+++|+.| +..+.+++..+   +....++++||...+.....   
T Consensus        85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~--d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~---  159 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALGLTGSILDLSEEVF--DKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG---  159 (270)
T ss_pred             HhCCCCCEEEEcCCcCCCCCChhhCCHHHH--HHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC---
Confidence                589999999987655 3445555555  5889999994 66666666543   22567888888764332211   


Q ss_pred             CCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCc-hHHHHHhhh
Q 035965          150 WRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPS-SIQVLLSPI  225 (348)
Q Consensus       150 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~-~~~~~~~~~  225 (348)
                                           +...|+.+|.+.+.+.+..+.+   +++++..+-|+.|..+........ ....+... 
T Consensus       160 ---------------------~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~-  217 (270)
T KOG0725|consen  160 ---------------------SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEA-  217 (270)
T ss_pred             ---------------------CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhh-
Confidence                                 1146999999999999998876   589999999999988862211110 00111111 


Q ss_pred             cCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          226 TGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ......++ .|+         +.-.+|++..+.+++...
T Consensus       218 ~~~~~~~p-~gr---------~g~~~eva~~~~fla~~~  246 (270)
T KOG0725|consen  218 TDSKGAVP-LGR---------VGTPEEVAEAAAFLASDD  246 (270)
T ss_pred             hccccccc-cCC---------ccCHHHHHHhHHhhcCcc
Confidence            00112222 445         448999999999888764

>PLN00015 protochlorophyllide reductase

Probab=99.64  E-value=3.4e-15  Score=133.49  Aligned_cols=189  Identities=19%  Similarity=0.119  Sum_probs=120.6

Q ss_pred             EEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CCCEEE
Q 035965           15 CVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GCDGVF   84 (348)
Q Consensus        15 lVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vi   84 (348)
                      +||||++.||.+++++|+++| ++|++++|+..+. .... +.....++.++.+|+.|.+++.++++       .+|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 9999999976543 2211 11112357888999999988876653       479999


Q ss_pred             EccccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHhh----cCC-cceEEEeccceeeeecCC-C-CC---CC--
Q 035965           85 HVAASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACLK----SES-VKRVVLTSSVSTITAKDS-S-GE---WR--  151 (348)
Q Consensus        85 h~a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~-~~~~v~~SS~~~~~~~~~-~-~~---~~--  151 (348)
                      |+||..... .....+.++|  ...+++|+.++..+++.+..    .+. .++||++||...+..... . .+   ..  
T Consensus        81 nnAG~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~  158 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGF--ELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDL  158 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhh
Confidence            999975332 1112223333  57899999998888776543    221 368999999764321110 0 00   00  


Q ss_pred             ----CcccCCCCCCcchhh-ccCCCcchhHhhHHHHHHHHHHHHHh----CCCcEEEEecCcccc
Q 035965          152 ----PVVDESCQTPIHHVW-NKKASGWVYVLSKLLSEETAFKFANE----NKIDLVSVITTTVAG  207 (348)
Q Consensus       152 ----~~~~E~~~~~~~~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~v~G  207 (348)
                          ....+....  .+.. ....+...|+.||.+.+.+.+.++++    .++.++.++||.|..
T Consensus       159 ~~~~~~~~~~~~~--~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  221 (308)
T PLN00015        159 RGLAGGLNGLNSS--AMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIAT  221 (308)
T ss_pred             hhhhcccCCccch--hhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence                000000000  0000 00113457999999977777777665    379999999999964

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.64  E-value=9e-15  Score=115.42  Aligned_cols=210  Identities=18%  Similarity=0.192  Sum_probs=143.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +.+..+||||+..||+++++.|.+.|++|.+.+++...+ ......+...+-..+.+|+.++.++...++       .++
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps   92 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS   92 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence            457899999999999999999999999999999977644 222222211345678899999887766543       589


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-----CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-----ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      ++++|||+.....-..-.-++|  ...+.+|+.|+..+.+++.+.     +..-+||.+||+-  +...+-         
T Consensus        93 vlVncAGItrD~~Llrmkq~qw--d~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIV--GkiGN~---------  159 (256)
T KOG1200|consen   93 VLVNCAGITRDGLLLRMKQEQW--DSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIV--GKIGNF---------  159 (256)
T ss_pred             EEEEcCccccccceeeccHHHH--HHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhh--cccccc---------
Confidence            9999999876554334434455  588999999999999988654     2234899999974  322221         


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    ..+-|+.+|.-.--+-+.++++   .+|++..+-||+|-.|-.....+..    ...+.+   .+|
T Consensus       160 --------------GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v----~~ki~~---~iP  218 (256)
T KOG1200|consen  160 --------------GQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKV----LDKILG---MIP  218 (256)
T ss_pred             --------------cchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHH----HHHHHc---cCC
Confidence                          1123666665544444444333   4899999999999887544322222    222222   233


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMEN  263 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~  263 (348)
                       .|+.+         ..+|+|....++...
T Consensus       219 -mgr~G---------~~EevA~~V~fLAS~  238 (256)
T KOG1200|consen  219 -MGRLG---------EAEEVANLVLFLASD  238 (256)
T ss_pred             -ccccC---------CHHHHHHHHHHHhcc
Confidence             56655         899999999988743

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.63  E-value=6.5e-14  Score=123.83  Aligned_cols=217  Identities=13%  Similarity=0.046  Sum_probs=138.5

Q ss_pred             cCCCCCCeEEEeCC--CChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc------------cccC--CCCCeEEEEccC-
Q 035965            6 ESTGRSKTFCVTGA--NGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF------------SKWT--RSDRLRLFQADL-   67 (348)
Q Consensus         6 ~~~~~~~~ilVtGa--tGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~------------~~~~--~~~~~~~~~~Dl-   67 (348)
                      ++.+++|++|||||  +..||.++++.|++.|.+|++ .|..++. ...            ....  .......+.+|+ 
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   82 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV   82 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence            34577899999999  799999999999999999988 5543221 000            0000  011245678888 


Q ss_pred             -CCcc------------------hHHHhhc-------CCCEEEEccccCcc--ccccccccccchhhhhhhhhHHHHHHH
Q 035965           68 -QVEG------------------SFDKAVM-------GCDGVFHVAASMEF--DINVKDNIETYVQSTVINPAIQSTLNL  119 (348)
Q Consensus        68 -~d~~------------------~~~~~~~-------~~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~~~~nv~~~~~l  119 (348)
                       .+.+                  ++.++++       .+|++|||||....  ....+.+.++|  ...+++|+.+...+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~--~~~~~vN~~~~~~l  160 (303)
T PLN02730         83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGY--LAAISASSYSFVSL  160 (303)
T ss_pred             cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHH--HHHHHHHhHHHHHH
Confidence             3333                  4444443       48999999975321  22223444555  57899999999999


Q ss_pred             HHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh----CC
Q 035965          120 LKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE----NK  194 (348)
Q Consensus       120 l~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~  194 (348)
                      ++++... ....++|++||.......+.                        ....|+.||.+.+.+.+.++.+    ++
T Consensus       161 ~~~~~p~m~~~G~II~isS~a~~~~~p~------------------------~~~~Y~asKaAl~~l~~~la~El~~~~g  216 (303)
T PLN02730        161 LQHFGPIMNPGGASISLTYIASERIIPG------------------------YGGGMSSAKAALESDTRVLAFEAGRKYK  216 (303)
T ss_pred             HHHHHHHHhcCCEEEEEechhhcCCCCC------------------------CchhhHHHHHHHHHHHHHHHHHhCcCCC
Confidence            8887653 11268999999764321111                        1126999999999999999876    36


Q ss_pred             CcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          195 IDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       195 ~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      +++..+-||.+-.+.... .+.. ......... .  .+ .++         +...+|++.++++++...
T Consensus       217 IrVn~V~PG~v~T~~~~~-~~~~-~~~~~~~~~-~--~p-l~r---------~~~peevA~~~~fLaS~~  271 (303)
T PLN02730        217 IRVNTISAGPLGSRAAKA-IGFI-DDMIEYSYA-N--AP-LQK---------ELTADEVGNAAAFLASPL  271 (303)
T ss_pred             eEEEEEeeCCccCchhhc-cccc-HHHHHHHHh-c--CC-CCC---------CcCHHHHHHHHHHHhCcc
Confidence            999999999887664321 1100 001111111 0  11 112         457899999999998743

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.57  E-value=3.1e-14  Score=115.28  Aligned_cols=221  Identities=15%  Similarity=0.082  Sum_probs=158.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccCc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASME   91 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~~   91 (348)
                      .+.++.|++||.|+++|+.....+++|-.+.|+..+.-+.   .+...+.++++|.....-+...+.++..++-+++-+.
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~---sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfg  129 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLS---SWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFG  129 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhh---CCCcccchhhccccccCcchhhhcCCcccHHHhcCcc
Confidence            4689999999999999999999999999999987644111   1235788899998887767777888899998887554


Q ss_pred             cccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCC
Q 035965           92 FDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKAS  171 (348)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  171 (348)
                      ..            ..+...|-....+..+++.+.| +++|+|+|-.. ++..+..                       |
T Consensus       130 n~------------~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d-~~~~~~i-----------------------~  172 (283)
T KOG4288|consen  130 NI------------ILMDRINGTANINAVKAAAKAG-VPRFVYISAHD-FGLPPLI-----------------------P  172 (283)
T ss_pred             ch------------HHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhh-cCCCCcc-----------------------c
Confidence            22            2667778888888999999999 99999999865 4332220                       2


Q ss_pred             cchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHH----HHhhhcCC---CCccccccccccCCCC
Q 035965          172 GWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQV----LLSPITGD---SKFFSILSSVSNRMGS  244 (348)
Q Consensus       172 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~  244 (348)
                      + -|-.+|+.+|..+.+.   +..+-++||||.+||...-.++...+..    +....+..   ...++..|.     ..
T Consensus       173 r-GY~~gKR~AE~Ell~~---~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~-----l~  243 (283)
T KOG4288|consen  173 R-GYIEGKREAEAELLKK---FRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGP-----LL  243 (283)
T ss_pred             h-hhhccchHHHHHHHHh---cCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccccc-----cc
Confidence            2 4999999999988874   4589999999999998544332221111    11222222   122333333     45


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHH
Q 035965          245 IALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKL  288 (348)
Q Consensus       245 r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~  288 (348)
                      +..+.++++|.+.+.++++|...|       .+++.|+.++-.+
T Consensus       244 ~ppvnve~VA~aal~ai~dp~f~G-------vv~i~eI~~~a~k  280 (283)
T KOG4288|consen  244 APPVNVESVALAALKAIEDPDFKG-------VVTIEEIKKAAHK  280 (283)
T ss_pred             CCCcCHHHHHHHHHHhccCCCcCc-------eeeHHHHHHHHHH
Confidence            679999999999999999986544       4466666655443

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.56  E-value=1.3e-13  Score=119.03  Aligned_cols=199  Identities=18%  Similarity=0.074  Sum_probs=129.1

Q ss_pred             HHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc----CCCEEEEccccCcccccccccccc
Q 035965           27 LVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM----GCDGVFHVAASMEFDINVKDNIET  102 (348)
Q Consensus        27 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~Vih~a~~~~~~~~~~~~~~~  102 (348)
                      ++++|+++|++|++++|+..+..         ..+++.+|++|.+++.++++    ++|+|||+||.....         
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~---------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~---------   62 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT---------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTA---------   62 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh---------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCC---------
Confidence            47899999999999999865421         23568899999999888775    589999999975321         


Q ss_pred             chhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCC----CCCCcc--hh-hccCCCcch
Q 035965          103 YVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDES----CQTPIH--HV-WNKKASGWV  174 (348)
Q Consensus       103 ~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~----~~~~~~--~~-~~~~~~~~~  174 (348)
                       +....+++|+.++..+++.+... ...++||++||...+.....     .+..|.    ......  .. ....++...
T Consensus        63 -~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (241)
T PRK12428         63 -PVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQR-----LELHKALAATASFDEGAAWLAAHPVALATG  136 (241)
T ss_pred             -CHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccc-----hHHHHhhhccchHHHHHHhhhccCCCcccH
Confidence             22488999999999999998753 11369999999886542211     111111    000000  00 001124568


Q ss_pred             hHhhHHHHHHHHHHHH-H---hCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeH
Q 035965          175 YVLSKLLSEETAFKFA-N---ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI  250 (348)
Q Consensus       175 Y~~sK~~~E~~~~~~~-~---~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v  250 (348)
                      |+.||.+.+.+.+.++ .   ..|+++..++||.+.++......+....   .....  ...+ .++         +...
T Consensus       137 Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~---~~~~~--~~~~-~~~---------~~~p  201 (241)
T PRK12428        137 YQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQ---ERVDS--DAKR-MGR---------PATA  201 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhh---Hhhhh--cccc-cCC---------CCCH
Confidence            9999999999998887 3   3589999999999988853321100000   00000  0011 111         4578


Q ss_pred             HHHHHHHHHhhcCC
Q 035965          251 EDICNAHIFLMEND  264 (348)
Q Consensus       251 ~D~a~~~~~~~~~~  264 (348)
                      +|+|+++.+++...
T Consensus       202 e~va~~~~~l~s~~  215 (241)
T PRK12428        202 DEQAAVLVFLCSDA  215 (241)
T ss_pred             HHHHHHHHHHcChh
Confidence            99999999988643

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.56  E-value=2.3e-13  Score=120.07  Aligned_cols=228  Identities=21%  Similarity=0.135  Sum_probs=150.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-c-cccc--cCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-Q-IFSK--WTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~-~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .+..+.++|||||+.||.++++.|+.+|.+|+...|+..+. . ...+  ......+.++++|+.+..++.++.+     
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            34568999999999999999999999999999999987433 1 1111  2233567889999999998877654     


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                        ..|+.|++||.+.......  -+  -.+..+.+|..|...|++.+.    ... ..|||++||... ......   ..
T Consensus       112 ~~~ldvLInNAGV~~~~~~~t--~D--G~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~-~~~~~~---~~  182 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPFSLT--KD--GLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILG-GGKIDL---KD  182 (314)
T ss_pred             CCCccEEEeCcccccCCcccC--cc--chhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccc-cCccch---hh
Confidence              4799999999876655211  11  225789999998887777664    333 379999999763 111110   01


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                      .-.|....        ......|+.||++...+...++++.  |+.+..+.||.+..+.... ...+...+...+.... 
T Consensus       183 l~~~~~~~--------~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~~~-  252 (314)
T KOG1208|consen  183 LSGEKAKL--------YSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSWPL-  252 (314)
T ss_pred             ccchhccC--------ccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec-chHHHHHHHHHHHHHh-
Confidence            11111100        0012259999999999999988775  6999999999998885443 1222222222211100 


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceE
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQY  270 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y  270 (348)
                                      +-..+.-|+..+.+..+|..   .|.|
T Consensus       253 ----------------~ks~~~ga~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  253 ----------------TKSPEQGAATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             ----------------ccCHHHHhhheehhccCccccCccccc
Confidence                            11566777888887777743   4455

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.55  E-value=2.3e-13  Score=116.14  Aligned_cols=173  Identities=24%  Similarity=0.216  Sum_probs=128.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc---------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM---------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---------~   79 (348)
                      ...|-|+|||+-...|..||++|.++|+.|.+....+..++........++...++.|+++++++.++.+         +
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            4467799999999999999999999999999988665544222222225788899999999999988765         3


Q ss_pred             CCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           80 CDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        80 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      .=.||||||.... ...+.-+.++|  ...+++|..|+..+..+....  ...+|+|++||...  ..+.          
T Consensus       107 LwglVNNAGi~~~~g~~ewl~~~d~--~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G--R~~~----------  172 (322)
T KOG1610|consen  107 LWGLVNNAGISGFLGPDEWLTVEDY--RKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG--RVAL----------  172 (322)
T ss_pred             ceeEEeccccccccCccccccHHHH--HHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc--CccC----------
Confidence            5689999995433 23233444444  578999999988888776532  11379999999753  1111          


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCC
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPF  209 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~  209 (348)
                                   +...+|+.||.+.|.+.....+|   +|+++.++-|| +|-..
T Consensus       173 -------------p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG-~f~T~  214 (322)
T KOG1610|consen  173 -------------PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG-FFKTN  214 (322)
T ss_pred             -------------cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC-ccccc
Confidence                         13357999999999998888766   69999999999 55444

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.54  E-value=5.4e-14  Score=112.63  Aligned_cols=167  Identities=20%  Similarity=0.197  Sum_probs=124.1

Q ss_pred             CCCeEEEeCC-CChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc--------C
Q 035965           10 RSKTFCVTGA-NGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--------G   79 (348)
Q Consensus        10 ~~~~ilVtGa-tGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~   79 (348)
                      ..++|||||+ +|.||-+|++.|.++|+.|+++.|+.+.. .+...    .++..+..|+++++.+.....        .
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~----~gl~~~kLDV~~~~~V~~v~~evr~~~~Gk   81 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ----FGLKPYKLDVSKPEEVVTVSGEVRANPDGK   81 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh----hCCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence            4678999975 59999999999999999999999987655 33322    268889999999988876543        3


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      .|+++|+||..-.....+..++++  +..+++|+-|..+++++....  ...++||+++|..++-+.+.           
T Consensus        82 ld~L~NNAG~~C~~Pa~d~~i~av--e~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf-----------  148 (289)
T KOG1209|consen   82 LDLLYNNAGQSCTFPALDATIAAV--EQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPF-----------  148 (289)
T ss_pred             eEEEEcCCCCCcccccccCCHHHH--HhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccch-----------
Confidence            699999999643322224444444  688999999988888877642  12468999999876654333           


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAG  207 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G  207 (348)
                                    .+.|..||.+...+.+.+.-+   +|++++.+-+|.|--
T Consensus       149 --------------~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T  187 (289)
T KOG1209|consen  149 --------------GSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVAT  187 (289)
T ss_pred             --------------hhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence                          357999999988877776533   578888777776644

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.54  E-value=1.3e-13  Score=109.97  Aligned_cols=170  Identities=16%  Similarity=0.163  Sum_probs=122.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      ..+.+||||||+..||..|+++|.+.|.+|+++.|+..+. ....   ..+.+....+|+.|.++.+++++       ..
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~---~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKA---ENPEIHTEVCDVADRDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHh---cCcchheeeecccchhhHHHHHHHHHhhCCch
Confidence            4467899999999999999999999999999999987654 2222   12467788999999987766654       47


Q ss_pred             CEEEEccccCcccccc--ccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           81 DGVFHVAASMEFDINV--KDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~--~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +++|||||+.......  .+.+.+.  ..-+.+|..++..|..+...+   ++...+|.+||.-++-+...         
T Consensus        80 NvliNNAGIqr~~dlt~~e~~~~~~--~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~---------  148 (245)
T COG3967          80 NVLINNAGIQRNEDLTGAEDLLDDA--EQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMAS---------  148 (245)
T ss_pred             heeeecccccchhhccCCcchhhHH--HHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccc---------
Confidence            9999999986543211  2222211  356788988888887766543   22567999999654322111         


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHH---HhCCCcEEEEecCccccC
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFA---NENKIDLVSVITTTVAGP  208 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~~~~~~lR~~~v~G~  208 (348)
                        .              -.|..+|.+...+-..+.   +..++.++=+-|+.|--+
T Consensus       149 --~--------------PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         149 --T--------------PVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             --c--------------ccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence              1              149999999887766654   445799999999988765

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.54  E-value=2e-13  Score=118.50  Aligned_cols=172  Identities=22%  Similarity=0.163  Sum_probs=122.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc--c-cccccc-CCC-CCeEEEEccCCC-cchHHHhhc---
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK--L-QIFSKW-TRS-DRLRLFQADLQV-EGSFDKAVM---   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~--~-~~~~~~-~~~-~~~~~~~~Dl~d-~~~~~~~~~---   78 (348)
                      .+++++|+||||++.||..+++.|+++|++|+++.|....  . ...... ... ..+.+...|+++ .+++..+++   
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4567899999999999999999999999999888887543  1 111110 011 257778899998 776665543   


Q ss_pred             ----CCCEEEEccccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 ----GCDGVFHVAASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 ----~~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                          ++|++||+|+..... ...+...++|  +..+++|+.+...+.+.+...-..++||++||.... ....       
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~--~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~-------  151 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDW--DRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPP-------  151 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHH--HHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCC-------
Confidence                489999999986542 2223323444  588999999999988855433211289999997643 2211       


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccc
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVA  206 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~  206 (348)
                                       ....|+.||.+.+.+.+.++.+   +|+++..+.||.+-
T Consensus       152 -----------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         152 -----------------GQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence                             0146999999999998888855   57999999999554

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.52  E-value=7.7e-14  Score=113.16  Aligned_cols=214  Identities=16%  Similarity=0.060  Sum_probs=142.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc--cCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK--WTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      ..+|++++|||.|.||+.++++|+++|-.+.+++-+.+.. ...++  ......+-|+++|+++..+++++++       
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999998887777654433 22222  2234568899999999988888776       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHH----HHHHHhhc--CCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLN----LLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~----ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      .+|++||.||......         . +.++++|+.|..+    .+.+..+.  |...-+|.+||....++.+.      
T Consensus        83 ~iDIlINgAGi~~dkd---------~-e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~------  146 (261)
T KOG4169|consen   83 TIDILINGAGILDDKD---------W-ERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPV------  146 (261)
T ss_pred             ceEEEEcccccccchh---------H-HHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcccc------
Confidence            4799999999876433         3 4889999765554    55555443  34567999999654433222      


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHH-----HHhCCCcEEEEecCccccCCCC------CCCCchHHHH
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKF-----ANENKIDLVSVITTTVAGPFLT------SSVPSSIQVL  221 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~-----~~~~~~~~~~lR~~~v~G~~~~------~~~~~~~~~~  221 (348)
                                         ...|+.||...-.+.+.+     .++.|+++..++|+.+--.-..      ..... -..+
T Consensus       147 -------------------~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~-~~~~  206 (261)
T KOG4169|consen  147 -------------------FPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEY-SDSI  206 (261)
T ss_pred             -------------------chhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccc-cHHH
Confidence                               236999998776666653     3446999999999964221000      00000 0001


Q ss_pred             HhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 035965          222 LSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVK  275 (348)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~  275 (348)
                      ...+.          +..       --...+++..++.++|.+..+.+|.++..
T Consensus       207 ~~~l~----------~~~-------~q~~~~~a~~~v~aiE~~~NGaiw~v~~g  243 (261)
T KOG4169|consen  207 KEALE----------RAP-------KQSPACCAINIVNAIEYPKNGAIWKVDSG  243 (261)
T ss_pred             HHHHH----------Hcc-------cCCHHHHHHHHHHHHhhccCCcEEEEecC
Confidence            11111          111       22678899999999999877778877543

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.52  E-value=3.7e-13  Score=114.66  Aligned_cols=208  Identities=18%  Similarity=0.149  Sum_probs=150.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC---CCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT---RSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .+|+||||+..||..|+..+..+|..|.++.|+..+. ...+..+   ...++.+..+|+.|.+++...++       .+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            5899999999999999999999999999999987755 3333222   23347799999999888877664       37


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |.+|||||..-+....+-+.+++  +..+++|..|+.++++++...    .+..+|+.+||..+..+...          
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v--~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~G----------  181 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVV--EKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYG----------  181 (331)
T ss_pred             ceEEEecCcccccccccCCHHHH--HHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccc----------
Confidence            99999999877766656555544  578999999999999987643    12338999999875544322          


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC-Ccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS-KFF  232 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~  232 (348)
                                     .+.|..+|.+.--+.....+|   +++.++..-|+.+-.|+.... +          .-++ ...
T Consensus       182 ---------------ysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E-n----------~tkP~~t~  235 (331)
T KOG1210|consen  182 ---------------YSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE-N----------KTKPEETK  235 (331)
T ss_pred             ---------------ccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc-c----------ccCchhee
Confidence                           345888888777666666555   589999999998888864421 0          1111 111


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      .+.|..+       .+..+++|.+++.-+.+.
T Consensus       236 ii~g~ss-------~~~~e~~a~~~~~~~~rg  260 (331)
T KOG1210|consen  236 IIEGGSS-------VIKCEEMAKAIVKGMKRG  260 (331)
T ss_pred             eecCCCC-------CcCHHHHHHHHHhHHhhc
Confidence            1233333       678999999999877764

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.51  E-value=1.6e-12  Score=116.55  Aligned_cols=208  Identities=22%  Similarity=0.234  Sum_probs=130.9

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchH-HHhhcC----C
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSF-DKAVMG----C   80 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~-~~~~~~----~   80 (348)
                      .+.++++|+|+||||.+|+-+++.|+++|+.|.++.|+..++ .+............+..|...+.+. ..+.+.    .
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~  154 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGV  154 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccc
Confidence            445678999999999999999999999999999999988776 4443222233455556665544333 233332    2


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      .+++-+++-.....   +     . ..-..+...|++|++++|+..| ++|++++||+..   .....            
T Consensus       155 ~~v~~~~ggrp~~e---d-----~-~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~---~~~~~------------  209 (411)
T KOG1203|consen  155 VIVIKGAGGRPEEE---D-----I-VTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGG---TKFNQ------------  209 (411)
T ss_pred             eeEEecccCCCCcc---c-----C-CCcceecHHHHHHHHHHHHHhC-CceEEEEEeecC---cccCC------------
Confidence            34454444322211   1     0 1223456899999999999999 999999988653   22211            


Q ss_pred             CcchhhccCCCcch------hHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          161 PIHHVWNKKASGWV------YVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       161 ~~~~~~~~~~~~~~------Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                +.+.      +-.+|+.+|.++.    +.|++.+++|++...-...... .       ....+.+.....
T Consensus       210 ----------~~~~~~~~~~~~~~k~~~e~~~~----~Sgl~ytiIR~g~~~~~~~~~~-~-------~~~~~~~~~~~~  267 (411)
T KOG1203|consen  210 ----------PPNILLLNGLVLKAKLKAEKFLQ----DSGLPYTIIRPGGLEQDTGGQR-E-------VVVDDEKELLTV  267 (411)
T ss_pred             ----------CchhhhhhhhhhHHHHhHHHHHH----hcCCCcEEEeccccccCCCCcc-e-------ecccCccccccc
Confidence                      1222      3377788887766    4799999999997654322211 0       000111111111


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCCCCc
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDRAQG  268 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~  268 (348)
                      .++-       -.|.-.|+|+..+.++.++....
T Consensus       268 ~~~~-------~~i~r~~vael~~~all~~~~~~  294 (411)
T KOG1203|consen  268 DGGA-------YSISRLDVAELVAKALLNEAATF  294 (411)
T ss_pred             cccc-------eeeehhhHHHHHHHHHhhhhhcc
Confidence            1111       27888999999999988876644

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.51  E-value=5.9e-14  Score=121.08  Aligned_cols=214  Identities=22%  Similarity=0.202  Sum_probs=143.9

Q ss_pred             CCC--ChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhh--------cCCCEEEE
Q 035965           18 GAN--GYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAV--------MGCDGVFH   85 (348)
Q Consensus        18 Gat--GfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------~~~d~Vih   85 (348)
                      |++  +.||.+++++|+++|++|++++|+..+.  ....+.... ..+++.+|++|.+++.+++        ..+|++||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEY-GAEVIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHT-TSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHc-CCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            566  9999999999999999999999987752  122221111 2447999999998887764        35899999


Q ss_pred             ccccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           86 VAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        86 ~a~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      +++....    ....+.+.++|  ...++.|+.+...+++++... ....++|++||.......+               
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~---------------  142 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDW--DKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMP---------------  142 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHH--HHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBST---------------
T ss_pred             cccccccccCCCChHhCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCc---------------
Confidence            9997654    22223334444  578999999999999988653 1236899999876422211               


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHh----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANE----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                ....|+.+|.+.+.+.+.++.+    +||++..+.||.+..+.... ... ...+.....   ...+ .+
T Consensus       143 ----------~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~-~~~-~~~~~~~~~---~~~p-l~  206 (241)
T PF13561_consen  143 ----------GYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTER-IPG-NEEFLEELK---KRIP-LG  206 (241)
T ss_dssp             ----------TTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHH-HHT-HHHHHHHHH---HHST-TS
T ss_pred             ----------cchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhc-ccc-ccchhhhhh---hhhc-cC
Confidence                      2347999999999999998755    47999999999887653110 000 011111111   1111 22


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCC--CCCceEEEec
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQYICCV  274 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~y~~~~  274 (348)
                      +         +...+|+|.++.+++...  ...|+.+..+
T Consensus       207 r---------~~~~~evA~~v~fL~s~~a~~itG~~i~vD  237 (241)
T PF13561_consen  207 R---------LGTPEEVANAVLFLASDAASYITGQVIPVD  237 (241)
T ss_dssp             S---------HBEHHHHHHHHHHHHSGGGTTGTSEEEEES
T ss_pred             C---------CcCHHHHHHHHHHHhCccccCccCCeEEEC
Confidence            3         558999999999999865  3366654433

...

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.51  E-value=1.6e-12  Score=114.91  Aligned_cols=216  Identities=13%  Similarity=0.062  Sum_probs=131.1

Q ss_pred             CCCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCC---------Cccccccc--cCCCC-----CeEEEEccCCC
Q 035965            8 TGRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDP---------GKLQIFSK--WTRSD-----RLRLFQADLQV   69 (348)
Q Consensus         8 ~~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~~--~~~~~-----~~~~~~~Dl~d   69 (348)
                      ..++|+++||||+  ..||+++++.|+++|++|++.++.+         ........  .....     .+..+..|+.+
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            4467899999995  8999999999999999999876532         00000000  00000     01112233333


Q ss_pred             cc------------------hHHHhh-------cCCCEEEEccccCc--cccccccccccchhhhhhhhhHHHHHHHHHH
Q 035965           70 EG------------------SFDKAV-------MGCDGVFHVAASME--FDINVKDNIETYVQSTVINPAIQSTLNLLKA  122 (348)
Q Consensus        70 ~~------------------~~~~~~-------~~~d~Vih~a~~~~--~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~  122 (348)
                      .+                  ++.+++       ..+|++||+||...  .....+.+.++|  ...+++|+.+...++++
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~--~~~~~vNl~g~~~l~~a  162 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGY--LAALSTSSYSFVSLLSH  162 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHH--HHHHHHHhHHHHHHHHH
Confidence            32                  233333       25899999998642  122223444555  57899999999999998


Q ss_pred             Hhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh----CCCcE
Q 035965          123 CLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE----NKIDL  197 (348)
Q Consensus       123 ~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~  197 (348)
                      +... ....++|++||.....+.+.                        ....|+.+|.+.+.+.+.++.+    +|+++
T Consensus       163 ~~p~m~~~G~ii~iss~~~~~~~p~------------------------~~~~Y~asKaAl~~lt~~la~el~~~~gIrV  218 (299)
T PRK06300        163 FGPIMNPGGSTISLTYLASMRAVPG------------------------YGGGMSSAKAALESDTKVLAWEAGRRWGIRV  218 (299)
T ss_pred             HHHHhhcCCeEEEEeehhhcCcCCC------------------------ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence            8753 11357999988654322111                        1125999999999999998876    37999


Q ss_pred             EEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          198 VSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       198 ~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ..+.||.+-.+.... .... ..........   .+ .++         +...+|+++++.+++...
T Consensus       219 n~V~PG~v~T~~~~~-~~~~-~~~~~~~~~~---~p-~~r---------~~~peevA~~v~~L~s~~  270 (299)
T PRK06300        219 NTISAGPLASRAGKA-IGFI-ERMVDYYQDW---AP-LPE---------PMEAEQVGAAAAFLVSPL  270 (299)
T ss_pred             EEEEeCCccChhhhc-cccc-HHHHHHHHhc---CC-CCC---------CcCHHHHHHHHHHHhCcc
Confidence            999999887653211 0000 0011111110   11 122         457899999999988753

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.50  E-value=5e-13  Score=108.48  Aligned_cols=175  Identities=23%  Similarity=0.187  Sum_probs=120.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEc-CCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVR-DPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r-~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      |.++.|+||||+..||.-|+++|++. |.++++..+ ++.++  .+....-..++++.++.|+++.+++..+++      
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            34677999999999999999999965 666665555 46653  222222246799999999999887776553      


Q ss_pred             ---CCCEEEEccccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHhh----cC----------CcceEEEecccee
Q 035965           79 ---GCDGVFHVAASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACLK----SE----------SVKRVVLTSSVST  140 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~----------~~~~~v~~SS~~~  140 (348)
                         +.|++|++||..... .-.+.+.+.|  ...+++|+.++..+.+++--    ..          ....+|++||...
T Consensus        81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~--~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~  158 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSYNTVLKPSRAVL--LEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAG  158 (249)
T ss_pred             ccCCceEEEeccceeeecccccCCcHHHH--HHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccc
Confidence               579999999975433 2223333334  57899999988877765431    11          1236898988753


Q ss_pred             eeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCcccc
Q 035965          141 ITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAG  207 (348)
Q Consensus       141 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G  207 (348)
                      -  ...      ..              ..+...|..||.+.-.+.++.+-+   .++-++.+.||+|--
T Consensus       159 s--~~~------~~--------------~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~T  206 (249)
T KOG1611|consen  159 S--IGG------FR--------------PGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQT  206 (249)
T ss_pred             c--cCC------CC--------------CcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEc
Confidence            2  111      00              014567999999999888887644   457788999998743

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.48  E-value=5.2e-13  Score=109.74  Aligned_cols=163  Identities=21%  Similarity=0.226  Sum_probs=112.6

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCC-Ccc----ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY-IVHATVRDP-GKL----QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~-~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++||||+|-||..+++.|+++|. +|+++.|+. ...    .+..+.....++.++.+|++|++++.++++       .
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            589999999999999999999974 899999983 111    122222234578999999999999988875       3


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ++.|||+|+........+.+.+++  ...+...+.++.+|.++..... ...+|.+||.+.+.+...             
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~--~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~G~~g-------------  145 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEF--DAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLLGGPG-------------  145 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHH--HHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHTT-TT-------------
T ss_pred             cceeeeeeeeecccccccCCHHHH--HHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhccCcc-------------
Confidence            588999999865544333333333  4678888999999999998877 889999999987654433             


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTT  204 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~  204 (348)
                                  ...|+.+-...+.+.+.... .+.+++.+..+.
T Consensus       146 ------------q~~YaaAN~~lda~a~~~~~-~g~~~~sI~wg~  177 (181)
T PF08659_consen  146 ------------QSAYAAANAFLDALARQRRS-RGLPAVSINWGA  177 (181)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHHH-TTSEEEEEEE-E
T ss_pred             ------------hHhHHHHHHHHHHHHHHHHh-CCCCEEEEEccc
Confidence                        24699999888888776544 689988887664

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.47  E-value=7.6e-13  Score=143.16  Aligned_cols=172  Identities=17%  Similarity=0.123  Sum_probs=132.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc---c------------------------------------
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL---Q------------------------------------   49 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~---~------------------------------------   49 (348)
                      +++++|||||+|.||..++++|+++ |.+|++++|++...   .                                    
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            4679999999999999999999998 69999999982100   0                                    


Q ss_pred             ----------cccccCCCCCeEEEEccCCCcchHHHhhc------CCCEEEEccccCccccccccccccchhhhhhhhhH
Q 035965           50 ----------IFSKWTRSDRLRLFQADLQVEGSFDKAVM------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAI  113 (348)
Q Consensus        50 ----------~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv  113 (348)
                                +..+.....++.++.+|++|.+++.++++      ++|.|||+||........+.+.++|  ...+++|+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f--~~v~~~nv 2153 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEF--NAVYGTKV 2153 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHH--HHHHHHHH
Confidence                      00000123468899999999998877664      4899999999865554445556666  58899999


Q ss_pred             HHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC
Q 035965          114 QSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN  193 (348)
Q Consensus       114 ~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~  193 (348)
                      .|+.++++++.... .++||++||...+.+...                         ...|+.+|...+.+.+.++.++
T Consensus      2154 ~G~~~Ll~al~~~~-~~~IV~~SSvag~~G~~g-------------------------qs~YaaAkaaL~~la~~la~~~ 2207 (2582)
T TIGR02813      2154 DGLLSLLAALNAEN-IKLLALFSSAAGFYGNTG-------------------------QSDYAMSNDILNKAALQLKALN 2207 (2582)
T ss_pred             HHHHHHHHHHHHhC-CCeEEEEechhhcCCCCC-------------------------cHHHHHHHHHHHHHHHHHHHHc
Confidence            99999999998765 678999999876654433                         2369999999988888887765


Q ss_pred             -CCcEEEEecCccccCC
Q 035965          194 -KIDLVSVITTTVAGPF  209 (348)
Q Consensus       194 -~~~~~~lR~~~v~G~~  209 (348)
                       +++++.+.+|.+-|..
T Consensus      2208 ~~irV~sI~wG~wdtgm 2224 (2582)
T TIGR02813      2208 PSAKVMSFNWGPWDGGM 2224 (2582)
T ss_pred             CCcEEEEEECCeecCCc
Confidence             6899999999886653

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.42  E-value=6.6e-13  Score=103.03  Aligned_cols=213  Identities=19%  Similarity=0.176  Sum_probs=147.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGV   83 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~V   83 (348)
                      ...++.|++||+.-.||..+|++|.+.|.+|+++.|++... .+.+.  ...-++.+++|+.+-+.+.+++-   .+|.+
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e--~p~~I~Pi~~Dls~wea~~~~l~~v~pidgL   81 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE--TPSLIIPIVGDLSAWEALFKLLVPVFPIDGL   81 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh--CCcceeeeEecccHHHHHHHhhcccCchhhh
Confidence            44678999999999999999999999999999999988654 22221  11238899999999777777665   37999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      +|+||..-.....+-+-+++  +..+++|+.+..++.+...+    .+..+.+|.+||.+......              
T Consensus        82 VNNAgvA~~~pf~eiT~q~f--Dr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~--------------  145 (245)
T KOG1207|consen   82 VNNAGVATNHPFGEITQQSF--DRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLD--------------  145 (245)
T ss_pred             hccchhhhcchHHHHhHHhh--cceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccC--------------
Confidence            99999754443333222222  46789999998888887433    33345699999987543222              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCC-CCCCCchHHHHHhhhcCCCCccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFL-TSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                                 ..+.|..+|.+.+-+.+-.+-+.   .|++..+.|..|.-.-. +.+...-      ..+..-..++ .
T Consensus       146 -----------nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~------K~k~mL~riP-l  207 (245)
T KOG1207|consen  146 -----------NHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPD------KKKKMLDRIP-L  207 (245)
T ss_pred             -----------CceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCch------hccchhhhCc-h
Confidence                       23569999999998888888774   48999999998875422 2110000      0000001122 2


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                      ++         |.-++.++.++.+++....
T Consensus       208 ~r---------FaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  208 KR---------FAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             hh---------hhHHHHHHhhheeeeecCc
Confidence            22         7799999999999888654

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.37  E-value=8.3e-12  Score=97.20  Aligned_cols=161  Identities=19%  Similarity=0.120  Sum_probs=120.6

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      -|++|..+|.||||-.|+.|++++++.+.  +|+++.|+....     +...+.+.....|....+++...++++|+.|.
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d-----~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~Fc   89 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD-----PATDKVVAQVEVDFSKLSQLATNEQGPDVLFC   89 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC-----ccccceeeeEEechHHHHHHHhhhcCCceEEE
Confidence            36788999999999999999999999873  899999874211     11113566778888888888888899999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +-|....... .        +-++.+.-.....+.++|++.| |++|+.+||.++-   +.                   
T Consensus        90 aLgTTRgkaG-a--------dgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd---~s-------------------  137 (238)
T KOG4039|consen   90 ALGTTRGKAG-A--------DGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGAD---PS-------------------  137 (238)
T ss_pred             eecccccccc-c--------CceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCC---cc-------------------
Confidence            8886655442 1        2455566666778999999999 9999999997631   11                   


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS  213 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~  213 (348)
                           .+-.|...|-..|+-+..+-=   =+++|+|||.+.|......
T Consensus       138 -----SrFlY~k~KGEvE~~v~eL~F---~~~~i~RPG~ll~~R~esr  177 (238)
T KOG4039|consen  138 -----SRFLYMKMKGEVERDVIELDF---KHIIILRPGPLLGERTESR  177 (238)
T ss_pred             -----cceeeeeccchhhhhhhhccc---cEEEEecCcceeccccccc
Confidence                 223588888888877766422   2689999999999865543

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.30  E-value=3.8e-11  Score=106.35  Aligned_cols=181  Identities=15%  Similarity=-0.002  Sum_probs=123.9

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      ...+|+||+|+|++|.||+.++..|+.++  .++.++++...+.....+.....  .....+.+|+.++.+.++++|+||
T Consensus         4 ~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l~gaDvVV   81 (321)
T PTZ00325          4 SALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDT--PAKVTGYADGELWEKALRGADLVL   81 (321)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCc--CceEEEecCCCchHHHhCCCCEEE
Confidence            45678899999999999999999998655  68999998432222212111111  234556667666677889999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      ++||......  .      .+...+..|+..+.++++++++++ .+++|+++|.-+-.......   ..+.+....    
T Consensus        82 itaG~~~~~~--~------tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~---~~~~~~sg~----  145 (321)
T PTZ00325         82 ICAGVPRKPG--M------TRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAA---ETLKKAGVY----  145 (321)
T ss_pred             ECCCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHH---hhhhhccCC----
Confidence            9999753322  1      224789999999999999999999 89999999965321111100   000111111    


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCC
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLT  211 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~  211 (348)
                           +|...||.+-+..-++-...++..++....++ +.|+|.+..
T Consensus       146 -----p~~~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        146 -----DPRKLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             -----ChhheeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence                 15557888766666777777888888888888 788887665

>PRK06720 hypothetical protein; Provisional

Probab=99.24  E-value=1.1e-10  Score=94.49  Aligned_cols=129  Identities=16%  Similarity=0.086  Sum_probs=82.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc-ccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      ++++.++||||+|.||..+++.|.++|++|++++|+.... .. ..+........++.+|+++.+++.++++       +
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4568999999999999999999999999999999876533 11 1111112356788999999988776542       5


Q ss_pred             CCEEEEccccCcccccccc-ccccchhhhhhhhh--HHHHHHHHHHHhhcC------CcceEEEecccee
Q 035965           80 CDGVFHVAASMEFDINVKD-NIETYVQSTVINPA--IQSTLNLLKACLKSE------SVKRVVLTSSVST  140 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~-~~~~~~~~~~~~~n--v~~~~~ll~~~~~~~------~~~~~v~~SS~~~  140 (348)
                      +|++||+||.........+ ..+++   ..++.|  ..-++.+.....+.+      ..+||-.+||.++
T Consensus        94 iDilVnnAG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         94 IDMLFQNAGLYKIDSIFSRQQENDS---NVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             CCEEEECCCcCCCCCcccccchhHh---hceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            8999999997554332222 11111   233333  222333333322222      3578888888764

>PLN00106 malate dehydrogenase

Probab=99.19  E-value=3.7e-10  Score=100.21  Aligned_cols=176  Identities=15%  Similarity=0.003  Sum_probs=120.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ..+||+|||++|.||+.++..|..++  .++.++++...+.....+.....  .....++.+.+++.+.++++|+|||+|
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~--~~~i~~~~~~~d~~~~l~~aDiVVitA   94 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINT--PAQVRGFLGDDQLGDALKGADLVIIPA   94 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCc--CceEEEEeCCCCHHHHcCCCCEEEEeC
Confidence            35699999999999999999998766  48999998763322222211111  223335444456778899999999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      |......  .      ...+.+..|+..++++.+.+++.+ ...+|+++|-=+-...+- .  ..........       
T Consensus        95 G~~~~~g--~------~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i-~--t~~~~~~s~~-------  155 (323)
T PLN00106         95 GVPRKPG--M------TRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPI-A--AEVLKKAGVY-------  155 (323)
T ss_pred             CCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHH-H--HHHHHHcCCC-------
Confidence            9754422  1      234889999999999999999999 788888888432100000 0  0001111111       


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCC
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPF  209 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~  209 (348)
                        +|...||.+++..+++-..+++..+++...++- .|+|..
T Consensus       156 --p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~-~ViGeH  194 (323)
T PLN00106        156 --DPKKLFGVTTLDVVRANTFVAEKKGLDPADVDV-PVVGGH  194 (323)
T ss_pred             --CcceEEEEecchHHHHHHHHHHHhCCChhheEE-EEEEeC
Confidence              256689999999999999999999998888854 466655

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.13  E-value=2.2e-10  Score=93.22  Aligned_cols=99  Identities=17%  Similarity=0.183  Sum_probs=74.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcC-------CCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMG-------CDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~d~V   83 (348)
                      |+++|||||||+|. +++.|.++|++|++++|++.+. .+.........+.++.+|+.|.+++.+++++       +|.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            57999999999886 9999999999999999976544 2222111234678889999999988877652       4555


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcc----eEEEec
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK----RVVLTS  136 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~----~~v~~S  136 (348)
                      |+.+-                        +.++.++.++|++.+ ++    +|+|+=
T Consensus        80 v~~vh------------------------~~~~~~~~~~~~~~g-v~~~~~~~~h~~  111 (177)
T PRK08309         80 VAWIH------------------------SSAKDALSVVCRELD-GSSETYRLFHVL  111 (177)
T ss_pred             EEecc------------------------ccchhhHHHHHHHHc-cCCCCceEEEEe
Confidence            54432                        344668999999988 77    899983

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.10  E-value=5.8e-10  Score=95.52  Aligned_cols=174  Identities=21%  Similarity=0.137  Sum_probs=119.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cC-CCCCeEEEEccCCCcch----HHHhhcC--CC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WT-RSDRLRLFQADLQVEGS----FDKAVMG--CD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~-~~~~~~~~~~Dl~d~~~----~~~~~~~--~d   81 (348)
                      +.=.+|||||..||+..++.|+++|.+|++++|+.++. ...+. .. ..-+++++..|.++.+.    +.+.+.+  +.
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg  128 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG  128 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence            35589999999999999999999999999999998765 22221 11 11357889999998764    4444444  56


Q ss_pred             EEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           82 GVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        82 ~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      ++|||+|.... +.+..+...... ...+.+|+.++..+.+...    +.+ .+-+|++||.+..-+.+           
T Consensus       129 ILVNNvG~~~~~P~~f~~~~~~~~-~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~p~p-----------  195 (312)
T KOG1014|consen  129 ILVNNVGMSYDYPESFLKYPEGEL-QNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLIPTP-----------  195 (312)
T ss_pred             EEEecccccCCCcHHHHhCchhhh-hheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccccCh-----------
Confidence            89999998652 222222111111 4678899988877777654    333 56799999976432111           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCC
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLT  211 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~  211 (348)
                                    -.+.|+.+|...+.+-....+|   +||.+-.+-|..|-++...
T Consensus       196 --------------~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~  239 (312)
T KOG1014|consen  196 --------------LLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAK  239 (312)
T ss_pred             --------------hHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccc
Confidence                          2357999999877776666655   4788888888888776443

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.08  E-value=8.6e-10  Score=89.90  Aligned_cols=218  Identities=17%  Similarity=0.093  Sum_probs=133.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcccccccc-CCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKW-TRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +.+.|||||++..||.-++..+.+.+.+.....+.........+. ...+...+..+|+.....+.+..+       .-|
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~   84 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD   84 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence            346789999999999999999999887665544433222111000 001223334455555443333332       369


Q ss_pred             EEEEccccCccccccc---cccccchhhhhhhhhHHHHHHHHHHHhhc--CC--cceEEEeccceeeeecCCCCCCCCcc
Q 035965           82 GVFHVAASMEFDINVK---DNIETYVQSTVINPAIQSTLNLLKACLKS--ES--VKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~--~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +||||||...+.....   .....|  ..++..|+.+...|...+...  +.  .+-+|++||...+.+..         
T Consensus        85 iiI~NAG~lgdvsk~~~~~~D~~qw--~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~---------  153 (253)
T KOG1204|consen   85 IIIHNAGSLGDVSKGAVDLGDSDQW--KKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFS---------  153 (253)
T ss_pred             EEEecCCCccchhhccCCcccHHHH--HHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhcccc---------
Confidence            9999999866544222   222334  578999999988888876543  21  36799999987654333         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCC-----CCCchHHHHHhhhcC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTS-----SVPSSIQVLLSPITG  227 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~-----~~~~~~~~~~~~~~~  227 (348)
                                      ....|+.+|++-+-+....+.+.  +++++.++||.|=-+....     .+..-...+.+-+  
T Consensus       154 ----------------~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el--  215 (253)
T KOG1204|consen  154 ----------------SWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKEL--  215 (253)
T ss_pred             ----------------HHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHH--
Confidence                            23479999999999998887553  7889999999764432110     0000000011111  


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC-CCCceE
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND-RAQGQY  270 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~-~~~~~y  270 (348)
                             ....       ..+...+.+..+..++++. ..+|.|
T Consensus       216 -------~~~~-------~ll~~~~~a~~l~~L~e~~~f~sG~~  245 (253)
T KOG1204|consen  216 -------KESG-------QLLDPQVTAKVLAKLLEKGDFVSGQH  245 (253)
T ss_pred             -------HhcC-------CcCChhhHHHHHHHHHHhcCcccccc
Confidence                   1112       2778899999999998877 555543

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.03  E-value=7.5e-10  Score=86.07  Aligned_cols=217  Identities=18%  Similarity=0.229  Sum_probs=141.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      ++-..+||||.+.+|...++.|.++|..|.+++.-.++. ...+.  ...++-|...|++...++..++.       +.|
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vake--lg~~~vf~padvtsekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKE--LGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHH--hCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence            345679999999999999999999999999999866655 22221  23578899999999988877664       579


Q ss_pred             EEEEccccCcc-cc-----ccccccccchhhhhhhhhHHHHHHHHHHHhh----c-----CCcceEEEeccceeeeecCC
Q 035965           82 GVFHVAASMEF-DI-----NVKDNIETYVQSTVINPAIQSTLNLLKACLK----S-----ESVKRVVLTSSVSTITAKDS  146 (348)
Q Consensus        82 ~Vih~a~~~~~-~~-----~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~-----~~~~~~v~~SS~~~~~~~~~  146 (348)
                      +.+|||+.... +.     .....++++  +..+++|+.||.|+++.-..    +     |...-+|..-|.+++.+...
T Consensus        86 ~~vncagia~a~ktyn~~k~~~h~ledf--qrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g  163 (260)
T KOG1199|consen   86 ALVNCAGIAYAFKTYNVQKKKHHDLEDF--QRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG  163 (260)
T ss_pred             eeeeccceeeeeeeeeecccccccHHHh--hheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc
Confidence            99999986322 21     122334444  57889999999999986542    1     22334566666555544333


Q ss_pred             CCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHh
Q 035965          147 SGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLS  223 (348)
Q Consensus       147 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~  223 (348)
                                               ...|..||-+.--+..-.+++   .||++..+-|+.+--|-... .+.-...+..
T Consensus       164 -------------------------qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllss-lpekv~~fla  217 (260)
T KOG1199|consen  164 -------------------------QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSS-LPEKVKSFLA  217 (260)
T ss_pred             -------------------------hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhh-hhHHHHHHHH
Confidence                                     246888887755444444443   37999999888654443322 1211111111


Q ss_pred             hhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEE
Q 035965          224 PITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYI  271 (348)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~  271 (348)
                         . ..+++  .+.+         |...-+.....+++++..+|..+
T Consensus       218 ---~-~ipfp--srlg---------~p~eyahlvqaiienp~lngevi  250 (260)
T KOG1199|consen  218 ---Q-LIPFP--SRLG---------HPHEYAHLVQAIIENPYLNGEVI  250 (260)
T ss_pred             ---H-hCCCc--hhcC---------ChHHHHHHHHHHHhCcccCCeEE
Confidence               1 12222  3333         77888888888999988777543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.99  E-value=4.5e-09  Score=93.95  Aligned_cols=177  Identities=14%  Similarity=0.070  Sum_probs=104.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC-------CeEEEEEcCCCccccccccCC-CCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG-------YIVHATVRDPGKLQIFSKWTR-SDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      +.||+||||+|+||++++..|+..+       .+|+++++.+........... .+.......|+....++.+.++++|+
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi   81 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV   81 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence            4589999999999999999998844       589999996532111110000 00000223355445667788899999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcccCC-CCC
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDES-CQT  160 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~-~~~  160 (348)
                      |||+||......  .      .....++.|+.-...+.+...++. +...+|.+|.-.  ....      ...-+. ...
T Consensus        82 VI~tAG~~~~~~--~------~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv--D~~t------~~~~k~~~~~  145 (325)
T cd01336          82 AILVGAMPRKEG--M------ERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPA--NTNA------LILLKYAPSI  145 (325)
T ss_pred             EEEeCCcCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcH--HHHH------HHHHHHcCCC
Confidence            999999754432  2      224889999999999999888884 344566655411  0000      011111 111


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCC
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTS  212 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~  212 (348)
                      +         +...=+.+.+..-++-...++..+++.-.++-..|+|.....
T Consensus       146 ~---------~~~ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~s  188 (325)
T cd01336         146 P---------KENFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSST  188 (325)
T ss_pred             C---------HHHEEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCCC
Confidence            0         111112233333444445566667887777777788875543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.91  E-value=6.2e-09  Score=93.59  Aligned_cols=90  Identities=26%  Similarity=0.310  Sum_probs=75.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ||+|||.|| |+||+.+++.|+++| .+|++.+|+..+. ++...  ..++++..+.|..|.+++.+++++.|+|||++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~--~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p   77 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL--IGGKVEALQVDAADVDALVALIKDFDLVINAAP   77 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh--ccccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence            579999998 999999999999999 8999999997766 43322  123799999999999999999999999999986


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE  127 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~  127 (348)
                      ...                        ...++++|.+.|
T Consensus        78 ~~~------------------------~~~i~ka~i~~g   92 (389)
T COG1748          78 PFV------------------------DLTILKACIKTG   92 (389)
T ss_pred             chh------------------------hHHHHHHHHHhC
Confidence            421                        236888888888

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.91  E-value=1.6e-08  Score=90.15  Aligned_cols=170  Identities=13%  Similarity=0.064  Sum_probs=114.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-------eEEEEEcCCCc--c--ccccccC----CCCCeEEEEccCCCcchHHH
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-------IVHATVRDPGK--L--QIFSKWT----RSDRLRLFQADLQVEGSFDK   75 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-------~V~~~~r~~~~--~--~~~~~~~----~~~~~~~~~~Dl~d~~~~~~   75 (348)
                      ++||.|+|++|.||+.++..|+..|.       ++.+++.....  +  ....+..    ...++++     .  ....+
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-----~--~~~~~   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-----T--DDPNV   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-----e--cCcHH
Confidence            56999999999999999999998774       78999985432  2  1111110    0011221     1  12245


Q ss_pred             hhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCC-cceEEEeccceeeeecCCCCCCCCcc
Q 035965           76 AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES-VKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        76 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      .++++|+||.+||......  .+      ....+..|+.-.+.+.+...+.++ ...+|.+|--.  .....     ...
T Consensus        75 ~~~daDivvitaG~~~k~g--~t------R~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv--D~~t~-----~~~  139 (322)
T cd01338          75 AFKDADWALLVGAKPRGPG--ME------RADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPC--NTNAL-----IAM  139 (322)
T ss_pred             HhCCCCEEEEeCCCCCCCC--Cc------HHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcH--HHHHH-----HHH
Confidence            6779999999999743322  22      247899999999999999998873 55666666311  00000     011


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLT  211 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~  211 (348)
                      +...-.         ++...||.+++..+++...+++..+++...+|..+|||++..
T Consensus       140 k~sg~~---------p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~  187 (322)
T cd01338         140 KNAPDI---------PPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP  187 (322)
T ss_pred             HHcCCC---------ChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence            111001         145579999999999999999999999999999999999744

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09620 hypothetical protein; Provisional

Probab=98.81  E-value=1.3e-08  Score=86.03  Aligned_cols=82  Identities=17%  Similarity=0.209  Sum_probs=56.3

Q ss_pred             CCCeEEEeCCC----------------ChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchH
Q 035965           10 RSKTFCVTGAN----------------GYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSF   73 (348)
Q Consensus        10 ~~~~ilVtGat----------------GfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   73 (348)
                      .+|+||||+|.                ||+|++|+++|+++|++|+++++....... ..+ ....+..+.++....+.+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~-~~~-~~~~~~~V~s~~d~~~~l   79 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN-DIN-NQLELHPFEGIIDLQDKM   79 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc-ccC-CceeEEEEecHHHHHHHH
Confidence            57899999886                999999999999999999999864321100 000 011234455633333567


Q ss_pred             HHhhc--CCCEEEEccccCccc
Q 035965           74 DKAVM--GCDGVFHVAASMEFD   93 (348)
Q Consensus        74 ~~~~~--~~d~Vih~a~~~~~~   93 (348)
                      .++++  ++|+|||+||...+.
T Consensus        80 ~~~~~~~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         80 KSIITHEKVDAVIMAAAGSDWV  101 (229)
T ss_pred             HHHhcccCCCEEEECcccccee
Confidence            77774  689999999985543

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.77  E-value=4.4e-08  Score=81.19  Aligned_cols=180  Identities=17%  Similarity=0.076  Sum_probs=114.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-----eEEEEEcCCCcc-c-cccccC----CCCCeEEEEccCCCcchHHHhhc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-----IVHATVRDPGKL-Q-IFSKWT----RSDRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-----~V~~~~r~~~~~-~-~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      +-|.++|||+++.||.+||..|++...     ++.+.+|+.+++ . ...+..    ..-+++++..|+++..++.++.+
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            346789999999999999999998753     356777877665 2 222211    12368899999999887766643


Q ss_pred             -------CCCEEEEccccCccccc---------------------------cccccccchhhhhhhhhHHHHHHHHHHHh
Q 035965           79 -------GCDGVFHVAASMEFDIN---------------------------VKDNIETYVQSTVINPAIQSTLNLLKACL  124 (348)
Q Consensus        79 -------~~d~Vih~a~~~~~~~~---------------------------~~~~~~~~~~~~~~~~nv~~~~~ll~~~~  124 (348)
                             ..|.|+-+||.+..+.-                           ...+-+++  ...+++||-|..-+++...
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~l--g~iFetnVFGhfyli~~l~  159 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGL--GEIFETNVFGHFYLIRELE  159 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccch--hhHhhhcccchhhhHhhhh
Confidence                   57999999997654321                           11111222  5788999999888877665


Q ss_pred             hc---CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEE
Q 035965          125 KS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLV  198 (348)
Q Consensus       125 ~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~  198 (348)
                      ..   +..+++|.+||..+-...-       -+.+-..         .....+|..||++.+.+-....+.   .|+.--
T Consensus       160 pll~~~~~~~lvwtSS~~a~kk~l-------sleD~q~---------~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qy  223 (341)
T KOG1478|consen  160 PLLCHSDNPQLVWTSSRMARKKNL-------SLEDFQH---------SKGKEPYSSSKRLTDLLHVALNRNFKPLGINQY  223 (341)
T ss_pred             hHhhcCCCCeEEEEeecccccccC-------CHHHHhh---------hcCCCCcchhHHHHHHHHHHHhccccccchhhh
Confidence            42   3345899999975321110       1111111         113346999999988765554443   245555


Q ss_pred             EEecCcccc
Q 035965          199 SVITTTVAG  207 (348)
Q Consensus       199 ~lR~~~v~G  207 (348)
                      ++.||....
T Consensus       224 vv~pg~~tt  232 (341)
T KOG1478|consen  224 VVQPGIFTT  232 (341)
T ss_pred             cccCceeec
Confidence            566665433

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.75  E-value=3.2e-08  Score=84.08  Aligned_cols=70  Identities=16%  Similarity=0.206  Sum_probs=49.0

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCC--cchHHHhhcCCCEEEEccccCcc
Q 035965           18 GANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQV--EGSFDKAVMGCDGVFHVAASMEF   92 (348)
Q Consensus        18 GatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~d~Vih~a~~~~~   92 (348)
                      .+|||+|++|+++|+++|++|++++|.......     ...+++++.++..+  .+.+.+.++++|+|||+||....
T Consensus        23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~-----~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd~   94 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPE-----PHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSDY   94 (229)
T ss_pred             ccchHHHHHHHHHHHhCCCEEEEEECcccccCC-----CCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCCc
Confidence            458999999999999999999999875431110     01356666544322  23455566789999999997653

>cd00704 MDH Malate dehydrogenase

Probab=98.66  E-value=3.1e-07  Score=82.00  Aligned_cols=166  Identities=16%  Similarity=0.104  Sum_probs=100.4

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC-------eEEEEEcCCCccccccccCCCCCeEEEEccCCCc-----------chHH
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY-------IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVE-----------GSFD   74 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~-----------~~~~   74 (348)
                      ||.|+||+|.+|++++..|+..|.       ++++++++...          +..+....|+.|.           ....
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~----------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~   71 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM----------KALEGVVMELQDCAFPLLKGVVITTDPE   71 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc----------CccceeeeehhhhcccccCCcEEecChH
Confidence            799999999999999999987652       58899887620          0122233333333           3456


Q ss_pred             HhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCc
Q 035965           75 KAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        75 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      +.++++|+|||+||......  .      .....+..|+.-.+.+.....+.. +...+|.+|--.  .-...     ..
T Consensus        72 ~~~~~aDiVVitAG~~~~~g--~------tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv--D~~t~-----~~  136 (323)
T cd00704          72 EAFKDVDVAILVGAFPRKPG--M------ERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPA--NTNAL-----IA  136 (323)
T ss_pred             HHhCCCCEEEEeCCCCCCcC--C------cHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcH--HHHHH-----HH
Confidence            77889999999999754332  2      234789999999999999999884 455666665210  00000     00


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTS  212 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~  212 (348)
                      .+.....+         +...-+.+.+..-++-...++..+++.-.+.-..|+|.....
T Consensus       137 ~k~sg~~p---------~~~vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s  186 (323)
T cd00704         137 LKNAPNLP---------PKNFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHSNT  186 (323)
T ss_pred             HHHcCCCC---------HHHEEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEecccCc
Confidence            11111000         112234455555555555566666665555555678875443

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=98.64  E-value=4.6e-07  Score=80.68  Aligned_cols=170  Identities=16%  Similarity=0.019  Sum_probs=103.2

Q ss_pred             CeEEEeCCCChhHHHHHHHHHH---CCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLE---RGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~---~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |||+|+||+|.+|++++..|..   .++++.+++|++... ....+. ..+....+.+  .+.+++.+.++++|+||.++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~-~~~~~~~i~~--~~~~d~~~~l~~~DiVIita   77 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLS-HIPTAVKIKG--FSGEDPTPALEGADVVLISA   77 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhh-cCCCCceEEE--eCCCCHHHHcCCCCEEEEcC
Confidence            6899999999999999998854   256888888864321 111111 1111112233  22345566778999999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecccee----eeecCCCCCCCCcccCCCCCCcc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVST----ITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~----~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      |......  .      .....+..|+....++++++++.+ .+++|.+.|-=+    +.....      ..+...++   
T Consensus        78 G~~~~~~--~------~R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvsNP~D~~t~~~~~~------~~~~sg~p---  139 (312)
T PRK05086         78 GVARKPG--M------DRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIITNPVNTTVAIAAEV------LKKAGVYD---  139 (312)
T ss_pred             CCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCchHHHHHHHHHH------HHHhcCCC---
Confidence            9754432  1      224789999999999999999998 777887777321    000000      00111110   


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCC
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFL  210 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~  210 (348)
                             +.-..|..-+..-++....++..+++..-++ +.|+|.+.
T Consensus       140 -------~~rvig~~~Lds~R~~~~ia~~l~~~~~~v~-~~v~GeHg  178 (312)
T PRK05086        140 -------KNKLFGVTTLDVIRSETFVAELKGKQPGEVE-VPVIGGHS  178 (312)
T ss_pred             -------HHHEEeeecHHHHHHHHHHHHHhCCChhheE-EEEEEecC
Confidence                   1112333333434555556666778877777 77888763

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.63  E-value=1.5e-07  Score=80.85  Aligned_cols=95  Identities=14%  Similarity=0.080  Sum_probs=72.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~   88 (348)
                      |+|||+||||. |+.|++.|.+.|++|++..++.... .+...     +...+..+..|.+++.++++  ++|+||+++.
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~-----g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH   74 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH-----QALTVHTGALDPQELREFLKRHSIDILVDATH   74 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccccc-----CCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence            57999999999 9999999999999999999987644 22211     23456677778888888775  5999999987


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEE
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL  134 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  134 (348)
                      ++.                     ..-+.++.++|++.+ .+-+-|
T Consensus        75 PfA---------------------~~is~~a~~a~~~~~-ipylR~   98 (256)
T TIGR00715        75 PFA---------------------AQITTNATAVCKELG-IPYVRF   98 (256)
T ss_pred             HHH---------------------HHHHHHHHHHHHHhC-CcEEEE
Confidence            432                     233678999999998 654444

This enzyme was found to be a monomer by gel filtration.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.61  E-value=1.8e-06  Score=77.69  Aligned_cols=81  Identities=15%  Similarity=-0.002  Sum_probs=59.6

Q ss_pred             CCCCeEEEeCCCChhHHH--HHHHHHHCCCeEEEEEcCCCcc--c-----------ccccc-CCCCCeEEEEccCCCcch
Q 035965            9 GRSKTFCVTGANGYIGSW--LVKTLLERGYIVHATVRDPGKL--Q-----------IFSKW-TRSDRLRLFQADLQVEGS   72 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~--l~~~L~~~g~~V~~~~r~~~~~--~-----------~~~~~-~~~~~~~~~~~Dl~d~~~   72 (348)
                      ..+|++|||||++.+|.+  ++++| +.|.+|+++++.....  .           +.... .....+..+.+|+++.++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            346899999999999999  89999 9999999988532111  1           11111 112246678999999988


Q ss_pred             HHHhhc-------CCCEEEEccccC
Q 035965           73 FDKAVM-------GCDGVFHVAASM   90 (348)
Q Consensus        73 ~~~~~~-------~~d~Vih~a~~~   90 (348)
                      +.++++       ++|++||++|..
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC
Confidence            776654       589999999975

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.55  E-value=1.8e-07  Score=77.78  Aligned_cols=82  Identities=21%  Similarity=0.163  Sum_probs=62.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ..+.++++|+||+|.+|+.+++.|++.|++|++++|+..+. .+........+.+...+|..+.+++.++++++|+||++
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a  104 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA  104 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence            44578999999999999999999999999999999986544 22221111113456677888888888888999999997


Q ss_pred             ccc
Q 035965           87 AAS   89 (348)
Q Consensus        87 a~~   89 (348)
                      .+.
T Consensus       105 t~~  107 (194)
T cd01078         105 GAA  107 (194)
T ss_pred             CCC
Confidence            653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.51  E-value=1.3e-06  Score=78.11  Aligned_cols=166  Identities=16%  Similarity=0.093  Sum_probs=101.6

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC-------eEEEEEcCCCccccccccCCCCCeEEEEccCCCcc-----------hHH
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY-------IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG-----------SFD   74 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-----------~~~   74 (348)
                      +|.|+|++|.||++++..|...|.       +++++++.+...          ..+-...|+.|..           ...
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~----------~a~g~~~Dl~d~~~~~~~~~~~~~~~~   70 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK----------VLEGVVMELMDCAFPLLDGVVPTHDPA   70 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc----------ccceeEeehhcccchhcCceeccCChH
Confidence            589999999999999999987542       688999865421          1223344444433           335


Q ss_pred             HhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCc
Q 035965           75 KAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        75 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      +.++++|+|||+||......  .      .....+..|+.-.+.+.+...++. +...+|.+|--.-+  ...     ..
T Consensus        71 ~~~~~aDiVVitAG~~~~~~--~------tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv--~t~-----v~  135 (324)
T TIGR01758        71 VAFTDVDVAILVGAFPRKEG--M------ERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANT--NAL-----VL  135 (324)
T ss_pred             HHhCCCCEEEEcCCCCCCCC--C------cHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHH--HHH-----HH
Confidence            67789999999999754322  1      224789999999999999999984 45566666531000  000     00


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTS  212 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~  212 (348)
                      .+.....+         +...=.-+.+..-++-...++..+++...++-..|+|.....
T Consensus       136 ~~~sg~~~---------~~vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s  185 (324)
T TIGR01758       136 SNYAPSIP---------PKNFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHSST  185 (324)
T ss_pred             HHHcCCCC---------cceEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCCCC
Confidence            01110100         111122233444455555566678888888777888876554

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.50  E-value=3e-07  Score=84.98  Aligned_cols=75  Identities=32%  Similarity=0.511  Sum_probs=57.9

Q ss_pred             EEEeCCCChhHHHHHHHHHHCC-C-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           14 FCVTGANGYIGSWLVKTLLERG-Y-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g-~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      |+|.|| |++|+.+++.|++.+ + +|++.+|+..+. ...... ...+++++..|+.|.+++.+++++.|+|||+++..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-cccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence            799999 999999999999886 4 899999988765 322110 23589999999999999999999999999999854

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=98.41  E-value=2.7e-07  Score=60.69  Aligned_cols=55  Identities=16%  Similarity=0.129  Sum_probs=34.1

Q ss_pred             HHHhCCCCCCCcccCCCCC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcC
Q 035965          286 LKLEYPSSKMQTFEGENQS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       286 i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      +.++.|+ ++|+.+.+.++  ......|++|++ +|||+|+++|+|+++++++|++++.
T Consensus         2 ~e~vtG~-~i~~~~~~rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np   59 (62)
T PF13950_consen    2 FEKVTGK-KIPVEYAPRRPGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKNP   59 (62)
T ss_dssp             HHHHHTS----EEEE---TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHST
T ss_pred             cHHHHCC-CCCceECCCCCCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCc
Confidence            4556666 77766665554  678899999999 9999999999999999999998864

...

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.33  E-value=6e-07  Score=70.27  Aligned_cols=111  Identities=14%  Similarity=0.057  Sum_probs=75.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc--ccccc---cCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL--QIFSK---WTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      |||.|+|++|.+|++++..|...+  .++.+++++..+.  ....+   .... ........ .+    .+.++++|+||
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~-~~~~~i~~-~~----~~~~~~aDivv   74 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPL-PSPVRITS-GD----YEALKDADIVV   74 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGS-TEEEEEEE-SS----GGGGTTESEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhc-cccccccc-cc----ccccccccEEE
Confidence            589999999999999999999886  5899999985433  11111   1111 12211111 22    33467899999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      -+|+......  .      .+.+.++.|+.-.+.+.+...+.++...++.+|
T Consensus        75 itag~~~~~g--~------sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   75 ITAGVPRKPG--M------SRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             ETTSTSSSTT--S------SHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             Eecccccccc--c------cHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            9999753322  2      224788999999999999999988445555554

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.33  E-value=2.4e-05  Score=64.40  Aligned_cols=214  Identities=18%  Similarity=0.124  Sum_probs=121.3

Q ss_pred             CCCCCeEEEeCC--CChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGA--NGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGa--tGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      -+.+|++||+|-  ..-|++.++++|.++|.++......+.-. +...+.......-++.+|+++.+++..+++      
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~   82 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW   82 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence            356899999986  46799999999999999987776654211 222222222334578999999988887765      


Q ss_pred             -CCCEEEEccccCccccc----cccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 -GCDGVFHVAASMEFDIN----VKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~----~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                       ..|.++|+.+..+...-    .+.+.++|  ...+++-..+...+.++++.. .....+|-+|    |.+...      
T Consensus        83 g~lD~lVHsIaFa~k~el~G~~~dtsre~f--~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt----Ylgs~r------  150 (259)
T COG0623          83 GKLDGLVHSIAFAPKEELKGDYLDTSREGF--LIAMDISAYSFTALAKAARPLMNNGGSILTLT----YLGSER------  150 (259)
T ss_pred             CcccEEEEEeccCChHHhCCcccccCHHHH--HhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE----ecccee------
Confidence             58999999997653321    11212222  233333344444455555432 1123333222    222111      


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                      .+               +..|.-|.+|.+.|.-++..+.+.   |+++..+-.|    |-.+-. .+-+..+..+++-..
T Consensus       151 ~v---------------PnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAG----PIrTLA-asgI~~f~~~l~~~e  210 (259)
T COG0623         151 VV---------------PNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAG----PIRTLA-ASGIGDFRKMLKENE  210 (259)
T ss_pred             ec---------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeeccc----chHHHH-hhccccHHHHHHHHH
Confidence            00               145678999999999999988774   4666555444    322211 001111222221111


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEN  263 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~  263 (348)
                      ..-          ..|--+.++||.....+++..
T Consensus       211 ~~a----------Pl~r~vt~eeVG~tA~fLlSd  234 (259)
T COG0623         211 ANA----------PLRRNVTIEEVGNTAAFLLSD  234 (259)
T ss_pred             hhC----------CccCCCCHHHhhhhHHHHhcc
Confidence            111          122356789999888888775

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.33  E-value=1.8e-06  Score=79.13  Aligned_cols=76  Identities=20%  Similarity=0.181  Sum_probs=59.0

Q ss_pred             CCCCCeEEEeCC----------------CChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcc
Q 035965            8 TGRSKTFCVTGA----------------NGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG   71 (348)
Q Consensus         8 ~~~~~~ilVtGa----------------tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   71 (348)
                      .+++++|+||||                +|.+|.+++++|.++|++|+++++... ...   +   .+  +...|+++.+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~---~---~~--~~~~dv~~~~  255 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT---P---AG--VKRIDVESAQ  255 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC---C---CC--cEEEccCCHH
Confidence            356789999999                999999999999999999999988652 111   1   12  3467899888


Q ss_pred             hHHHhhc----CCCEEEEccccCcc
Q 035965           72 SFDKAVM----GCDGVFHVAASMEF   92 (348)
Q Consensus        72 ~~~~~~~----~~d~Vih~a~~~~~   92 (348)
                      ++.++++    .+|++||+||....
T Consensus       256 ~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        256 EMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHHHhcCCCCEEEEccccccc
Confidence            7776653    58999999997544

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.30  E-value=1.1e-06  Score=78.32  Aligned_cols=73  Identities=26%  Similarity=0.251  Sum_probs=53.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC-C-CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER-G-YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~-g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ..+++|+||||+|+||+++|++|+++ | .+++++.|+..+. .+..        ++..+++.   ++.+++.++|+|||
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~--------el~~~~i~---~l~~~l~~aDiVv~  221 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA--------ELGGGKIL---SLEEALPEADIVVW  221 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH--------HhccccHH---hHHHHHccCCEEEE
Confidence            46789999999999999999999864 5 5899999876544 2221        11123433   36677889999999


Q ss_pred             ccccCcc
Q 035965           86 VAASMEF   92 (348)
Q Consensus        86 ~a~~~~~   92 (348)
                      +++....
T Consensus       222 ~ts~~~~  228 (340)
T PRK14982        222 VASMPKG  228 (340)
T ss_pred             CCcCCcC
Confidence            9987543

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.29  E-value=1.3e-06  Score=76.20  Aligned_cols=82  Identities=18%  Similarity=0.278  Sum_probs=64.7

Q ss_pred             eEEEeCCCChhHHHHHHHHHH----CCCeEEEEEcCCCcc-c-cccccC----CCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           13 TFCVTGANGYIGSWLVKTLLE----RGYIVHATVRDPGKL-Q-IFSKWT----RSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~----~g~~V~~~~r~~~~~-~-~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      .++|.|||||.|.++++.++.    .|...-+..|+..+. + +.....    ..+..-++.+|..|++++.+..+.+.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            589999999999999999998    678888889987755 2 221111    123344889999999999999999999


Q ss_pred             EEEccccCcccc
Q 035965           83 VFHVAASMEFDI   94 (348)
Q Consensus        83 Vih~a~~~~~~~   94 (348)
                      |+||+|+.....
T Consensus        87 ivN~vGPyR~hG   98 (423)
T KOG2733|consen   87 IVNCVGPYRFHG   98 (423)
T ss_pred             EEeccccceecC
Confidence            999999865443

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.23  E-value=2.2e-06  Score=72.76  Aligned_cols=66  Identities=14%  Similarity=0.154  Sum_probs=46.3

Q ss_pred             CCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhh-------cCCCEEEEccccC
Q 035965           18 GANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAV-------MGCDGVFHVAASM   90 (348)
Q Consensus        18 GatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~~~d~Vih~a~~~   90 (348)
                      .++|+||.+++++|+++|++|+++++.... .  .       .....+|+.+.++..+++       .++|++||+||..
T Consensus        22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-~--~-------~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~   91 (227)
T TIGR02114        22 HSTGHLGKIITETFLSAGHEVTLVTTKRAL-K--P-------EPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVS   91 (227)
T ss_pred             CcccHHHHHHHHHHHHCCCEEEEEcChhhc-c--c-------ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEec
Confidence            458999999999999999999998763210 0  0       011346777776655443       3689999999975


Q ss_pred             ccc
Q 035965           91 EFD   93 (348)
Q Consensus        91 ~~~   93 (348)
                      ...
T Consensus        92 d~~   94 (227)
T TIGR02114        92 DYT   94 (227)
T ss_pred             ccc
Confidence            443

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.15  E-value=1.4e-05  Score=71.25  Aligned_cols=115  Identities=14%  Similarity=0.169  Sum_probs=74.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCC--Ccccccc--ccCC--CCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDP--GKLQIFS--KWTR--SDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~--~~~~~~~--~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      |||.|+|++|++|.+++..|+..|+  +|++++|..  ++..-..  +...  .....   ..+.-..+.. .++++|+|
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~---~~i~~~~d~~-~l~~aDiV   76 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID---AEIKISSDLS-DVAGSDIV   76 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC---cEEEECCCHH-HhCCCCEE
Confidence            5899999999999999999999986  599999954  2221000  0000  00000   0111111233 47899999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSV  138 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~  138 (348)
                      |-+++......  .      .+...+..|+.-.+.+.+.+.+..+-.++|.+++.
T Consensus        77 iitag~p~~~~--~------~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          77 IITAGVPRKEG--M------SRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             EEecCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            99998643221  1      22477888999999999988887645567777763

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.15  E-value=4.5e-05  Score=67.65  Aligned_cols=175  Identities=15%  Similarity=-0.014  Sum_probs=103.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      |||.|+|++|.+|++++..|+..|  .++.+++....+.....+.............  ..+++.+.++++|+||-+||.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivvitaG~   78 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVVIPAGV   78 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEEEeCCC
Confidence            589999999999999999998887  5889998862222222221111111222110  112345678899999999997


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeee-e-cCCCCCCCCcccCCCCCCcchhhc
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTIT-A-KDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~-~-~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      ...+.  .      .+.+.+..|+.-.+.+.+...+.++-..+|.+|--.-.- . -..     ...+...+.       
T Consensus        79 ~~k~g--~------tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~-----~~~~~s~~p-------  138 (310)
T cd01337          79 PRKPG--M------TRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAE-----VLKKAGVYD-------  138 (310)
T ss_pred             CCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHH-----HHHHhcCCC-------
Confidence            43322  2      234889999999999999999888555566555422000 0 000     000011110       


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCC-CCC
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPF-LTS  212 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~-~~~  212 (348)
                         +....|..-+..-++....++..+++.-.++ +.|+|.+ ...
T Consensus       139 ---~~rviG~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeHsGds  180 (310)
T cd01337         139 ---PKRLFGVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGHSGVT  180 (310)
T ss_pred             ---HHHEEeeechHHHHHHHHHHHHhCcCHHHEE-EEEEecCCCCc
Confidence               1122343334445566666777777777777 7888987 343

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=98.03  E-value=8.5e-05  Score=65.98  Aligned_cols=115  Identities=17%  Similarity=0.042  Sum_probs=76.6

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      ||.|+|++|.||++++..|+.++.  ++.++|+.+.......+.............  +.+++.+.++++|+||-+||..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG~~   78 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAGVP   78 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCCCC
Confidence            689999999999999999988874  889999876332222221111111222101  1123456788999999999974


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      ....  .      ...+.+..|+.-.+.+.+...+.++...+|.+|-
T Consensus        79 ~~~g--~------~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        79 RKPG--M------TRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             CCCC--c------cHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            3322  2      2247899999999999999998874555555554

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=98.02  E-value=5.3e-05  Score=67.66  Aligned_cols=170  Identities=14%  Similarity=0.077  Sum_probs=102.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-------eEEEEEcCCCc--c--ccccccC----CCCCeEEEEccCCCcchHHH
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-------IVHATVRDPGK--L--QIFSKWT----RSDRLRLFQADLQVEGSFDK   75 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-------~V~~~~r~~~~--~--~~~~~~~----~~~~~~~~~~Dl~d~~~~~~   75 (348)
                      +.||.|+|++|++|++++..|+..|.       ++++++.....  .  ....+..    ...++..     .  ....+
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-----~--~~~~~   75 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-----T--TDPEE   75 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-----e--cChHH
Confidence            45899999999999999999998873       78999885421  2  1111110    0011111     1  12345


Q ss_pred             hhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCC-cceEEEeccceeeeecCCCCCCCCcc
Q 035965           76 AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES-VKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        76 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      .++++|+||.+||......  .      .....+..|+.-.+.+.+.+.+.++ ...+|.+|--  +.-...     ...
T Consensus        76 ~~~daDvVVitAG~~~k~g--~------tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNP--vDv~t~-----v~~  140 (323)
T TIGR01759        76 AFKDVDAALLVGAFPRKPG--M------ERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNP--ANTNAL-----IAS  140 (323)
T ss_pred             HhCCCCEEEEeCCCCCCCC--C------cHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCc--HHHHHH-----HHH
Confidence            6779999999999743322  2      2348899999999999999999874 4455555421  000000     001


Q ss_pred             cCC-CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCC
Q 035965          155 DES-CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTS  212 (348)
Q Consensus       155 ~E~-~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~  212 (348)
                      +.. .+          ++....|.+.+..-++-...++..+++...++-..|+|.....
T Consensus       141 k~s~g~----------p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s  189 (323)
T TIGR01759       141 KNAPDI----------PPKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSNT  189 (323)
T ss_pred             HHcCCC----------CHHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCCc
Confidence            111 11          0122344455555555555667778888878777788876543

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.02  E-value=1.1e-05  Score=70.00  Aligned_cols=79  Identities=18%  Similarity=0.220  Sum_probs=62.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      +...++|-|||||.|..++++|..+|.+-.+..|+..+. .+....    +.++-..++-+++.+++.+...++|+||+|
T Consensus         5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L----G~~~~~~p~~~p~~~~~~~~~~~VVlncvG   80 (382)
T COG3268           5 REYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL----GPEAAVFPLGVPAALEAMASRTQVVLNCVG   80 (382)
T ss_pred             cceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc----CccccccCCCCHHHHHHHHhcceEEEeccc
Confidence            345899999999999999999999999988888887765 222221    334455556668889999999999999999


Q ss_pred             cCcc
Q 035965           89 SMEF   92 (348)
Q Consensus        89 ~~~~   92 (348)
                      ++..
T Consensus        81 Pyt~   84 (382)
T COG3268          81 PYTR   84 (382)
T ss_pred             cccc
Confidence            8654

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.99  E-value=1.6e-05  Score=70.15  Aligned_cols=80  Identities=13%  Similarity=0.025  Sum_probs=59.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCe-EEEEEcCC---Ccc-cccc-ccCCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYI-VHATVRDP---GKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~-V~~~~r~~---~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      .++++++|+|| |.+|++++..|++.|.+ |++++|+.   .+. .+.. +......+.+...|+.+.+++...++.+|+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            45678999998 89999999999999985 99999986   333 2211 111112445667888888788888888999


Q ss_pred             EEEcccc
Q 035965           83 VFHVAAS   89 (348)
Q Consensus        83 Vih~a~~   89 (348)
                      |||+-..
T Consensus       203 lINaTp~  209 (289)
T PRK12548        203 LVNATLV  209 (289)
T ss_pred             EEEeCCC
Confidence            9998754

>PRK05442 malate dehydrogenase; Provisional

Probab=97.98  E-value=9.8e-05  Score=66.09  Aligned_cols=169  Identities=14%  Similarity=0.065  Sum_probs=100.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-------eEEEEEcCCCc--c--ccccccC----CCCCeEEEEccCCCcchHHH
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-------IVHATVRDPGK--L--QIFSKWT----RSDRLRLFQADLQVEGSFDK   75 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-------~V~~~~r~~~~--~--~~~~~~~----~~~~~~~~~~Dl~d~~~~~~   75 (348)
                      ++||.|+|++|.+|++++..|+..|.       ++.++|+.+..  .  ....+..    ...++.+     +  ....+
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~--~~~y~   76 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----T--DDPNV   76 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----e--cChHH
Confidence            56999999999999999999987653       78889885431  1  1111110    0011211     1  12235


Q ss_pred             hhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcc
Q 035965           76 AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        76 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      .++++|+||-+||......  .      .+.+.+..|+.-.+.+.+...++. +...+|.+|--.  .-...     ...
T Consensus        77 ~~~daDiVVitaG~~~k~g--~------tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPv--Dv~t~-----v~~  141 (326)
T PRK05442         77 AFKDADVALLVGARPRGPG--M------ERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPA--NTNAL-----IAM  141 (326)
T ss_pred             HhCCCCEEEEeCCCCCCCC--C------cHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCch--HHHHH-----HHH
Confidence            5779999999999643322  2      234889999999999999999855 345666666310  00000     000


Q ss_pred             cCC-CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCC
Q 035965          155 DES-CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLT  211 (348)
Q Consensus       155 ~E~-~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~  211 (348)
                      +.. .+          ++....|.+-+..-++-...++..+++...++...|+|....
T Consensus       142 k~s~g~----------p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~  189 (326)
T PRK05442        142 KNAPDL----------PAENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA  189 (326)
T ss_pred             HHcCCC----------CHHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC
Confidence            011 00          012234444555555555566767787777777777887544

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.96  E-value=6.2e-05  Score=63.83  Aligned_cols=73  Identities=21%  Similarity=0.302  Sum_probs=60.5

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a~   88 (348)
                      |+++|.|+ |-+|+.+|+.|.++||+|+++++++... .....   ......+.+|-+|++.+.++ ++++|+++-+.+
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~---~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD---ELDTHVVIGDATDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh---hcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence            57899996 9999999999999999999999988765 32221   12578899999999999987 788999996654

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.95  E-value=5.5e-05  Score=69.12  Aligned_cols=101  Identities=21%  Similarity=0.213  Sum_probs=64.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHH-hhcCCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDK-AVMGCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~Vih   85 (348)
                      .+++||.|.||||++|..|++.|.++ +.+|..+.+..... .+...     .......|+.+.+++.. .++++|+||-
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~-----~~~l~~~~~~~~~~~~~~~~~~~DvVf~  110 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV-----FPHLITQDLPNLVAVKDADFSDVDAVFC  110 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh-----CccccCccccceecCCHHHhcCCCEEEE
Confidence            45779999999999999999999988 67999888754332 11111     11122234443333332 2478999998


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceee
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTI  141 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~  141 (348)
                      +.+..                        .+.+++..+ +.+  .++|-+|+..-+
T Consensus       111 Alp~~------------------------~s~~i~~~~-~~g--~~VIDlSs~fRl  139 (381)
T PLN02968        111 CLPHG------------------------TTQEIIKAL-PKD--LKIVDLSADFRL  139 (381)
T ss_pred             cCCHH------------------------HHHHHHHHH-hCC--CEEEEcCchhcc
Confidence            76421                        234555555 334  689999998643

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.94  E-value=0.00021  Score=63.83  Aligned_cols=110  Identities=11%  Similarity=0.129  Sum_probs=75.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc--ccccccC---CCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL--QIFSKWT---RSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~--~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      ++||.|+|+ |.+|+.++..|+..|.  ++.+++++..+.  ....+..   ....+.....      .. +.++++|+|
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~------~~-~~~~~adiv   77 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG------DY-SDCKDADLV   77 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC------CH-HHhCCCCEE
Confidence            469999998 9999999999998886  899999876543  1111111   1112222211      22 346899999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      |-+|+......  .      .....+..|+.-.+.+++.+++.++..++|.+|
T Consensus        78 Iitag~~~k~g--~------~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         78 VITAGAPQKPG--E------TRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             EEecCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99999743322  2      224789999999999999999887455666655

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.86  E-value=0.00015  Score=64.63  Aligned_cols=109  Identities=12%  Similarity=0.064  Sum_probs=75.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc-cccc-ccC----CCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL-QIFS-KWT----RSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~-~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      +||.|.|+ |.+|+.++..|+..|  ++|.+++++..+. .... +..    ..........   +   .. .++++|+|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~---~---~~-~l~~aDIV   72 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAG---D---YS-DCKDADIV   72 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcC---C---HH-HhCCCCEE
Confidence            47999996 999999999999998  6899999987654 1111 100    0112222221   2   22 35789999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      |.+++......  .      .....+..|+.-.+.+.+.+++.++...+|.+|
T Consensus        73 Iitag~~~~~g--~------~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          73 VITAGAPQKPG--E------TRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             EEccCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            99998743322  2      224788999999999999999987555666665

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.86  E-value=7.5e-05  Score=66.77  Aligned_cols=115  Identities=14%  Similarity=0.114  Sum_probs=72.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |+||.|+|+ |.+|+.++..|+..|. +|+++++++...  ........ .........++...++ +.++++|+||.++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~d~-~~~~~aDiVii~~   78 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEA-APVEGFDTKITGTNDY-EDIAGSDVVVITA   78 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhh-hhhcCCCcEEEeCCCH-HHHCCCCEEEECC
Confidence            579999998 9999999999998875 999999976543  11111100 0000000111111223 3467999999998


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      +......  .      ...+.+..|+.-...+++.+.+..+...+|.+|
T Consensus        79 ~~p~~~~--~------~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         79 GVPRKPG--M------SRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCCCcC--C------CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            8543221  1      223667788888999999888876445566664

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.83  E-value=6.1e-05  Score=68.95  Aligned_cols=108  Identities=15%  Similarity=0.145  Sum_probs=70.7

Q ss_pred             CCCCeEEEeCC----------------CChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcch
Q 035965            9 GRSKTFCVTGA----------------NGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGS   72 (348)
Q Consensus         9 ~~~~~ilVtGa----------------tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   72 (348)
                      +++++|+||||                ||.+|.++++.|..+|++|+++.+.....    .+   ..  ....|+.+.++
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----~~---~~--~~~~~v~~~~~  253 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----TP---PG--VKSIKVSTAEE  253 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----CC---CC--cEEEEeccHHH
Confidence            56799999999                46799999999999999999988754321    01   12  24578888877


Q ss_pred             H-HHhh----cCCCEEEEccccCccccccc--cccccchhhhhhhhhHHHHHHHHHHHhhcC
Q 035965           73 F-DKAV----MGCDGVFHVAASMEFDINVK--DNIETYVQSTVINPAIQSTLNLLKACLKSE  127 (348)
Q Consensus        73 ~-~~~~----~~~d~Vih~a~~~~~~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~  127 (348)
                      + ..++    .++|++|++||...+.....  .-+...  ...+..|+..+..++...++..
T Consensus       254 ~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~--~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       254 MLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQ--GEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             HHHHHHHhhcccCCEEEEcccccccccccccccccccc--CCceeEEEEeCcHHHHHHHhhC
Confidence            7 4444    35899999999865533111  100000  1223455666777777776544

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.82  E-value=0.00012  Score=65.63  Aligned_cols=115  Identities=13%  Similarity=0.066  Sum_probs=75.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc--ccccccC--CCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL--QIFSKWT--RSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~--~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      +.+||.|+|| |.+|+.++..|+..| .++.+++++....  ....+..  ......   ..+....+++ .++++|+||
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~---~~i~~~~d~~-~l~~ADiVV   78 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSN---INILGTNNYE-DIKDSDVVV   78 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCC---eEEEeCCCHH-HhCCCCEEE
Confidence            4579999997 999999999998888 6899999876533  1111100  000100   1111112344 568999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      .+++......  .      .....+..|..-...+.+.+.+..+...+|.+|-
T Consensus        79 itag~~~~~g--~------~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         79 ITAGVQRKEE--M------TREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             ECCCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9998643322  1      2247788899889999999988874555776654

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.80  E-value=0.00018  Score=63.18  Aligned_cols=111  Identities=18%  Similarity=0.076  Sum_probs=72.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc--cccccc---CCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL--QIFSKW---TRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      +||.|+|+ |+||+.++..|+.++  .++.+++......  ....+.   .....-..+.+| .+    -+.++++|+|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv   74 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV   74 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence            58999999 999999999997774  4899999874332  111111   111111112222 11    34567899999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      -+||...-+.  .      .+.+.++.|..-.+.+.+...+.+....|+.+|
T Consensus        75 itAG~prKpG--m------tR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          75 ITAGVPRKPG--M------TRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             EeCCCCCCCC--C------CHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            9998654433  2      224889999999999999999888434444443

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.80  E-value=0.00028  Score=53.66  Aligned_cols=97  Identities=19%  Similarity=0.208  Sum_probs=54.4

Q ss_pred             eEEEeCCCChhHHHHHHHHHHC-CCeEEEEE-cCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           13 TFCVTGANGYIGSWLVKTLLER-GYIVHATV-RDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~-r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      ||.|.||||++|+.|++.|.+. ..++..+. ++.+.. .+...........-...+-.+.+    .+.++|+||.+.+.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Dvvf~a~~~   76 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPE----ELSDVDVVFLALPH   76 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGH----HHTTESEEEE-SCH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchh----HhhcCCEEEecCch
Confidence            6999999999999999999885 34655544 444222 23222211111211111113332    23689999998652


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      .                        .+..+...+.+.|  .++|=.|+..
T Consensus        77 ~------------------------~~~~~~~~~~~~g--~~ViD~s~~~  100 (121)
T PF01118_consen   77 G------------------------ASKELAPKLLKAG--IKVIDLSGDF  100 (121)
T ss_dssp             H------------------------HHHHHHHHHHHTT--SEEEESSSTT
T ss_pred             h------------------------HHHHHHHHHhhCC--cEEEeCCHHH
Confidence            1                        1334556666667  4677777653

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.78  E-value=9.6e-05  Score=64.48  Aligned_cols=114  Identities=14%  Similarity=0.047  Sum_probs=74.9

Q ss_pred             EEEeCCCChhHHHHHHHHHHCC----CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           14 FCVTGANGYIGSWLVKTLLERG----YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g----~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |.|+||+|.+|..++..|+..|    .+|.++|+++.+. ............. ....+.-..++.+.++++|+||-+++
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~d~~~~~~~aDiVv~t~~   79 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITDDPYEAFKDADVVIITAG   79 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECCchHHHhCCCCEEEECCC
Confidence            5789999999999999999988    7999999876543 1111000000000 01111112235667889999999998


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      ......  ..     . ......|+...+.+.+.+++..+...+|..|
T Consensus        80 ~~~~~g--~~-----r-~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          80 VGRKPG--MG-----R-LDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCCCcC--CC-----H-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            654433  11     2 3678889999999999999887555666664

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.76  E-value=0.00011  Score=60.13  Aligned_cols=78  Identities=17%  Similarity=0.214  Sum_probs=47.4

Q ss_pred             CCCeEEEeCC----------------CChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCC--cc
Q 035965           10 RSKTFCVTGA----------------NGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQV--EG   71 (348)
Q Consensus        10 ~~~~ilVtGa----------------tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~   71 (348)
                      ++++||||+|                ||-.|.+|++++..+|++|+.+..... ...      ...++.+..+-.+  .+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~------p~~~~~i~v~sa~em~~   74 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP------PPGVKVIRVESAEEMLE   74 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-----------TTEEEEE-SSHHHHHH
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc------cccceEEEecchhhhhh
Confidence            4678888865                799999999999999999999988632 111      1356666543222  12


Q ss_pred             hHHHhhcCCCEEEEccccCcccc
Q 035965           72 SFDKAVMGCDGVFHVAASMEFDI   94 (348)
Q Consensus        72 ~~~~~~~~~d~Vih~a~~~~~~~   94 (348)
                      .+.+.+.+.|++||+||...+..
T Consensus        75 ~~~~~~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   75 AVKELLPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             HHHHHGGGGSEEEE-SB--SEEE
T ss_pred             hhccccCcceeEEEecchhheee
Confidence            33444557899999999865543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.76  E-value=7.5e-05  Score=75.87  Aligned_cols=76  Identities=17%  Similarity=0.083  Sum_probs=59.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHC-CCe-------------EEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHH
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLER-GYI-------------VHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFD   74 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~-g~~-------------V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~   74 (348)
                      +|++|+|.|+ |++|+..++.|.+. +++             |.+++++..++ .+...   .++++.+..|+.|.+++.
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~---~~~~~~v~lDv~D~e~L~  643 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG---IENAEAVQLDVSDSESLL  643 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh---cCCCceEEeecCCHHHHH
Confidence            5789999997 99999999999875 333             77788776544 22221   136778999999999999


Q ss_pred             HhhcCCCEEEEcccc
Q 035965           75 KAVMGCDGVFHVAAS   89 (348)
Q Consensus        75 ~~~~~~d~Vih~a~~   89 (348)
                      ++++++|+||.+...
T Consensus       644 ~~v~~~DaVIsalP~  658 (1042)
T PLN02819        644 KYVSQVDVVISLLPA  658 (1042)
T ss_pred             HhhcCCCEEEECCCc
Confidence            988899999999864

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.75  E-value=0.00028  Score=63.67  Aligned_cols=69  Identities=22%  Similarity=0.214  Sum_probs=46.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCe---EEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYI---VHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |++|+|.||||++|.+|++.|.++||.   +..+.+..........    .+.+....|+.+.     .++++|+||-+.
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~----~g~~i~v~d~~~~-----~~~~vDvVf~A~   71 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSF----KGKELKVEDLTTF-----DFSGVDIALFSA   71 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeee----CCceeEEeeCCHH-----HHcCCCEEEECC
Confidence            468999999999999999999998874   4777765443311111    1234444455431     235899999876


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      +
T Consensus        72 g   72 (334)
T PRK14874         72 G   72 (334)
T ss_pred             C
Confidence            5

>PLN02602 lactate dehydrogenase

Probab=97.71  E-value=0.00027  Score=63.88  Aligned_cols=110  Identities=14%  Similarity=0.219  Sum_probs=74.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc--cccccc---CCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL--QIFSKW---TRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~--~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      +||.|+|+ |.||+.++..|+..|.  ++.+++.+..+.  ....+.   .......+...     .+.+ .++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~-----~dy~-~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILAS-----TDYA-VTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeC-----CCHH-HhCCCCEEE
Confidence            69999996 9999999999988774  799999876533  111111   11111222211     1122 377999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      -+||......  .      ...+.+..|+.-.+.+.+...+.++...+|.+|
T Consensus       111 itAG~~~k~g--~------tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        111 VTAGARQIPG--E------SRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             ECCCCCCCcC--C------CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999743322  2      224788899999999999999887556666666

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.69  E-value=0.00027  Score=65.44  Aligned_cols=172  Identities=13%  Similarity=0.050  Sum_probs=103.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC-------CC--eEEEEEcCCCcc--ccccccC----CCCCeEEEEccCCCcchHHH
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER-------GY--IVHATVRDPGKL--QIFSKWT----RSDRLRLFQADLQVEGSFDK   75 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~-------g~--~V~~~~r~~~~~--~~~~~~~----~~~~~~~~~~Dl~d~~~~~~   75 (348)
                      .-||.|+|++|.||++++..|+..       |.  +++.++++.++.  ....+..    ...++.+...   |    .+
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye  172 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YE  172 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence            458999999999999999999887       54  788888876644  2221111    0112211111   2    34


Q ss_pred             hhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh-cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           76 AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK-SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        76 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~-~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      .++++|+||-+||......  .      ...+.++.|+.-.+.+.+...+ .++...+|.+|--.  .-...     ...
T Consensus       173 ~~kdaDiVVitAG~prkpG--~------tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPv--Dv~t~-----v~~  237 (444)
T PLN00112        173 VFQDAEWALLIGAKPRGPG--M------ERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPC--NTNAL-----ICL  237 (444)
T ss_pred             HhCcCCEEEECCCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcH--HHHHH-----HHH
Confidence            5678999999999743322  2      2348899999999999999999 56456666666311  00000     001


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS  213 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~  213 (348)
                      ......+         ....-..+.+..-++-...++..+++...++-..|+|...+..
T Consensus       238 k~sg~~~---------~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGdsq  287 (444)
T PLN00112        238 KNAPNIP---------AKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQ  287 (444)
T ss_pred             HHcCCCC---------cceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCCce
Confidence            1111100         1222233344444555555666788887777778889865543

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.66  E-value=0.00012  Score=56.96  Aligned_cols=77  Identities=17%  Similarity=0.204  Sum_probs=54.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCe-EEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYI-VHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~-V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ..+.++++|.|+ |..|+.++.+|.+.|.+ |+++.|+..+. .+.... ....++++..  .   ++.+.+.++|+||+
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~-~~~~~~~~~~--~---~~~~~~~~~DivI~   81 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF-GGVNIEAIPL--E---DLEEALQEADIVIN   81 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH-TGCSEEEEEG--G---GHCHHHHTESEEEE
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc-CccccceeeH--H---HHHHHHhhCCeEEE
Confidence            456789999997 99999999999999975 99999987766 333222 1112333333  2   34466778999999


Q ss_pred             ccccCc
Q 035965           86 VAASME   91 (348)
Q Consensus        86 ~a~~~~   91 (348)
                      +.+...
T Consensus        82 aT~~~~   87 (135)
T PF01488_consen   82 ATPSGM   87 (135)
T ss_dssp             -SSTTS
T ss_pred             ecCCCC
Confidence            987543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.65  E-value=0.00032  Score=63.56  Aligned_cols=100  Identities=20%  Similarity=0.189  Sum_probs=60.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-ccccccCCCCCeEEE-EccCCCcchHHHhhcCCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QIFSKWTRSDRLRLF-QADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ||++|+|+||||++|..+++.|.+. +++++++.++.... .+....   +.+... ..++.+.+..  ...++|+||-+
T Consensus         1 ~m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~---~~~~~~~~~~~~~~~~~--~~~~vD~Vf~a   75 (343)
T PRK00436          1 MMIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVH---PHLRGLVDLVLEPLDPE--ILAGADVVFLA   75 (343)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhC---cccccccCceeecCCHH--HhcCCCEEEEC
Confidence            3579999999999999999999876 67887766643222 121111   111111 1233333332  34679999886


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecccee
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVST  140 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~  140 (348)
                      ....                        ....+...+.+.|  +++|=.|+..-
T Consensus        76 lP~~------------------------~~~~~v~~a~~aG--~~VID~S~~fR  103 (343)
T PRK00436         76 LPHG------------------------VSMDLAPQLLEAG--VKVIDLSADFR  103 (343)
T ss_pred             CCcH------------------------HHHHHHHHHHhCC--CEEEECCcccC
Confidence            5421                        1234555555566  67888888753

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.65  E-value=0.00031  Score=63.13  Aligned_cols=95  Identities=18%  Similarity=0.192  Sum_probs=57.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEE--EEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHA--TVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~--~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      +|++|+|+||||++|..|++.|.+++|.+.-  ..++..+. .....    .+   ...++.+.+.. + ++++|+||-+
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~----~~---~~l~~~~~~~~-~-~~~vD~vFla   73 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPF----AG---KNLRVREVDSF-D-FSQVQLAFFA   73 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeecc----CC---cceEEeeCChH-H-hcCCCEEEEc
Confidence            3579999999999999999999987764432  22332222 11111    11   12333333322 2 4689999987


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      .+..   .                     +..++..+.+.|  .++|=.|+..
T Consensus        74 ~p~~---~---------------------s~~~v~~~~~~G--~~VIDlS~~f  100 (336)
T PRK05671         74 AGAA---V---------------------SRSFAEKARAAG--CSVIDLSGAL  100 (336)
T ss_pred             CCHH---H---------------------HHHHHHHHHHCC--CeEEECchhh
Confidence            6410   0                     223666666667  5688888875

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.64  E-value=0.00076  Score=59.96  Aligned_cols=109  Identities=14%  Similarity=0.110  Sum_probs=74.0

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc--ccccccC----C-CCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL--QIFSKWT----R-SDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~--~~~~~~~----~-~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      ||.|.|+ |.||+.++..|+.++.  ++.+++....++  ....+..    . ...++...+|       .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            6899998 9999999999998874  799999866533  2222111    1 1134444333       3456799999


Q ss_pred             EEccccCccccccccccccch-hhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           84 FHVAASMEFDINVKDNIETYV-QSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~-~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      |-+||....+.  ..     . +.+.+..|+.-.+.+.+.+.+.++...+|.+|
T Consensus        73 vitaG~~~kpg--~t-----r~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          73 VITAGPSIDPG--NT-----DDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             EECCCCCCCCC--CC-----chHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            99999743322  11     1 24788999999999999999988444444444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.63  E-value=0.00041  Score=63.10  Aligned_cols=38  Identities=21%  Similarity=0.260  Sum_probs=31.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPG   46 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~   46 (348)
                      |||++|+|+||||++|++|++.|.+... ++.++.++.+
T Consensus         1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~   39 (349)
T PRK08664          1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASER   39 (349)
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChh
Confidence            4568999999999999999999987644 8888856544

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.63  E-value=0.0011  Score=59.15  Aligned_cols=109  Identities=16%  Similarity=0.198  Sum_probs=73.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc-----ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL-----QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      |||.|.|+ |.+|+.++..|+.+|  .+|.+++++..+.     .+...............   |   . +.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d---~-~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D---Y-ADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C---H-HHhCCCCEEE
Confidence            47999998 999999999999999  6899999976533     12111111111222222   2   2 3478999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      -+++......  .+      ....+..|+.....+.+.+.+.++...++..+
T Consensus        73 ita~~~~~~~--~~------r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          73 ITAGANQKPG--ET------RLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EccCCCCCCC--CC------HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9998643222  12      23678889999999999998887445555554

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.61  E-value=0.00032  Score=62.80  Aligned_cols=118  Identities=10%  Similarity=0.096  Sum_probs=76.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc--cccccc---C-CCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL--QIFSKW---T-RSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~~~~---~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      +++||.|+|| |.+|+.++..|+..|. +|++++.++...  ......   . .....++...  .   ++ +.++++|+
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~---d~-~~l~~aDi   77 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--N---NY-EDIAGSDV   77 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--C---CH-HHhCCCCE
Confidence            4579999995 9999999999998895 899999877633  111110   0 0111222211  1   23 35689999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      ||.+++......  . +-.+|...+.+..|+.-.+.+++.+.+..+...+|.+|-
T Consensus        78 VI~tag~~~~~~--~-~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         78 VIVTAGLTKRPG--K-SDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             EEECCCCCCCCC--C-CcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999998754322  1 001112246778899989999999988874446777664

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.59  E-value=0.00027  Score=62.98  Aligned_cols=110  Identities=11%  Similarity=0.105  Sum_probs=74.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc--ccccccC---CCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL--QIFSKWT---RSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      +||.|+|+ |.||+.++..|+..|  .++.+++.+....  ....+..   ......+...     .+.+ .++++|+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~-----~dy~-~~~~adivv   76 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD-----KDYS-VTANSKVVI   76 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC-----CCHH-HhCCCCEEE
Confidence            58999996 999999999998876  4789999866533  2111111   0111122221     1233 367999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      -+||......  .      .....+..|+.-.+.+.+.+.+.++...+|.+|
T Consensus        77 itaG~~~k~g--~------~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          77 VTAGARQNEG--E------SRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             ECCCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            9998754322  2      224788999999999999999987566676666

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.58  E-value=0.00046  Score=61.41  Aligned_cols=115  Identities=14%  Similarity=0.119  Sum_probs=72.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |||.|.|+ |.+|+.++..|+.+|+ +|++++......  ......... ........+.-..++.+ ++++|+||-+++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~-~~~~~~~~i~~t~d~~~-~~~aDiVIitag   78 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEAS-PVGGFDTKVTGTNNYAD-TANSDIVVITAG   78 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhh-hccCCCcEEEecCCHHH-hCCCCEEEEcCC
Confidence            58999997 9999999999999886 899999865432  111111000 00000111111122333 578999999998


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      ......  .      .....+..|+.....+++.+.+.++...+|.+|-
T Consensus        79 ~p~~~~--~------sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        79 LPRKPG--M------SREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCCCcC--C------CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            643221  1      2236788899999999999888764455666554

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.58  E-value=0.0002  Score=67.70  Aligned_cols=74  Identities=20%  Similarity=0.073  Sum_probs=54.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--c-cccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--Q-IFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ++.++|+|+|+.+ +|..+++.|++.|++|++++++....  . ...+.  ..+++++.+|..+     ....++|+||+
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~--~~~~~~~~~~~~~-----~~~~~~d~vv~   74 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELG--ELGIELVLGEYPE-----EFLEGVDLVVV   74 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH--hcCCEEEeCCcch-----hHhhcCCEEEE
Confidence            4568999999877 99999999999999999999875322  1 11111  1246777788776     23457899999


Q ss_pred             ccccC
Q 035965           86 VAASM   90 (348)
Q Consensus        86 ~a~~~   90 (348)
                      +++..
T Consensus        75 ~~g~~   79 (450)
T PRK14106         75 SPGVP   79 (450)
T ss_pred             CCCCC
Confidence            99864

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.57  E-value=0.00017  Score=64.55  Aligned_cols=35  Identities=23%  Similarity=0.297  Sum_probs=31.9

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK   47 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~   47 (348)
                      ++|.|+| +|++|+.++..|+++|++|++++|++..
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~   37 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAA   37 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHH
Confidence            5899999 6999999999999999999999998653

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.54  E-value=0.001  Score=60.03  Aligned_cols=107  Identities=18%  Similarity=0.203  Sum_probs=69.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccc----------------------cccCCCC--CeEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIF----------------------SKWTRSD--RLRL   62 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~----------------------~~~~~~~--~~~~   62 (348)
                      ++.++|+|.|+ |.+|+++++.|+..|. ++++++.+.-+. .+.                      .+....+  .++.
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~  100 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA  100 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            35678999997 9999999999999998 899999863111 000                      0000112  3445


Q ss_pred             EEccCCCcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeee
Q 035965           63 FQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTIT  142 (348)
Q Consensus        63 ~~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~  142 (348)
                      +..+++. +.+.++++++|+||.+...                       ...-..+.++|.+.+  ..+|+.|+.+.++
T Consensus       101 ~~~~~~~-~~~~~~~~~~DlVid~~Dn-----------------------~~~r~~ln~~~~~~~--iP~i~~~~~g~~G  154 (339)
T PRK07688        101 IVQDVTA-EELEELVTGVDLIIDATDN-----------------------FETRFIVNDAAQKYG--IPWIYGACVGSYG  154 (339)
T ss_pred             EeccCCH-HHHHHHHcCCCEEEEcCCC-----------------------HHHHHHHHHHHHHhC--CCEEEEeeeeeee
Confidence            5556643 4566778889999988431                       111234667777777  4588888766444

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.54  E-value=0.00061  Score=51.31  Aligned_cols=69  Identities=22%  Similarity=0.347  Sum_probs=54.0

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEccc
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVAA   88 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a~   88 (348)
                      |+|.|. |-+|..+++.|.+.+.+|+++++++... ....     .++.++.+|.+|++.+.++ +++++.|+-+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE-----EGVEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-----TTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh-----cccccccccchhhhHHhhcCccccCEEEEccC
Confidence            678887 8999999999999777999999987654 2222     2588999999999999875 568888886653

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK04148 hypothetical protein; Provisional

Probab=97.51  E-value=0.00076  Score=51.61  Aligned_cols=93  Identities=16%  Similarity=0.139  Sum_probs=67.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ++++|++.|. | -|.+++..|.+.|++|++++.++... ....     ..++++..|+.+++  .++-+++|.|+-.=-
T Consensus        16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-----~~~~~v~dDlf~p~--~~~y~~a~liysirp   86 (134)
T PRK04148         16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-----LGLNAFVDDLFNPN--LEIYKNAKLIYSIRP   86 (134)
T ss_pred             cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----hCCeEEECcCCCCC--HHHHhcCCEEEEeCC
Confidence            3578999995 7 89999999999999999999988644 2222     25789999999976  234457899885421


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEe
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT  135 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~  135 (348)
                                     |. +.       ...+++.|++.+ +.-+|..
T Consensus        87 ---------------p~-el-------~~~~~~la~~~~-~~~~i~~  109 (134)
T PRK04148         87 ---------------PR-DL-------QPFILELAKKIN-VPLIIKP  109 (134)
T ss_pred             ---------------CH-HH-------HHHHHHHHHHcC-CCEEEEc
Confidence                           21 22       346888999888 6555443

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.51  E-value=0.00023  Score=67.38  Aligned_cols=72  Identities=18%  Similarity=0.185  Sum_probs=58.9

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a~   88 (348)
                      |+|+|.|+ |.+|.++++.|.+.|++|+++++++... .+..    ..+++++.+|.++...+.++ ++++|.||-+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~----~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD----RLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh----hcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            48999997 9999999999999999999999977654 2221    12588999999999888887 788999887653

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.39  E-value=0.0009  Score=51.09  Aligned_cols=70  Identities=19%  Similarity=0.321  Sum_probs=43.2

Q ss_pred             CeEEEeCCCChhHHHHHHHHHH-CCCeEEEEE-cCCCcc---ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLE-RGYIVHATV-RDPGKL---QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~-~g~~V~~~~-r~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      |||+|.|++|-+|+.+++.+.+ .++++.+.. |+++..   .......    ..  ...+.-.++++++++.+|+||++
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~----~~--~~~~~v~~~l~~~~~~~DVvIDf   74 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAG----IG--PLGVPVTDDLEELLEEADVVIDF   74 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCT----SS--T-SSBEBS-HHHHTTH-SEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhC----cC--CcccccchhHHHhcccCCEEEEc
Confidence            5899999999999999999998 688876554 544211   1111110    00  11111124677778789999988


Q ss_pred             c
Q 035965           87 A   87 (348)
Q Consensus        87 a   87 (348)
                      .
T Consensus        75 T   75 (124)
T PF01113_consen   75 T   75 (124)
T ss_dssp             S
T ss_pred             C
Confidence            6

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.39  E-value=0.0019  Score=58.21  Aligned_cols=107  Identities=16%  Similarity=0.171  Sum_probs=68.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cccc----------------------c--cCCCCCeEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFS----------------------K--WTRSDRLRL   62 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~----------------------~--~~~~~~~~~   62 (348)
                      ++.++|+|.|+ |-+|+++++.|+..|. +++++|++.-.. .+.+                      +  .+..-.++.
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~  100 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP  100 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence            35679999997 8899999999999997 788888864111 0000                      0  011123455


Q ss_pred             EEccCCCcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeee
Q 035965           63 FQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTIT  142 (348)
Q Consensus        63 ~~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~  142 (348)
                      +..|++. +.+.++++++|+||.+....                       ..-..+-++|.+.+  ..+|+.+..+.++
T Consensus       101 ~~~~~~~-~~~~~~~~~~DlVid~~D~~-----------------------~~r~~in~~~~~~~--ip~i~~~~~g~~G  154 (338)
T PRK12475        101 VVTDVTV-EELEELVKEVDLIIDATDNF-----------------------DTRLLINDLSQKYN--IPWIYGGCVGSYG  154 (338)
T ss_pred             EeccCCH-HHHHHHhcCCCEEEEcCCCH-----------------------HHHHHHHHHHHHcC--CCEEEEEecccEE
Confidence            6667653 46777888999999885311                       11123456667777  4577776655443

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.39  E-value=0.0016  Score=55.83  Aligned_cols=96  Identities=13%  Similarity=0.036  Sum_probs=72.7

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a   87 (348)
                      ||++|||.|||+ =|+.|++.|.+.|++|++..-.....  .    ....+..+.+-+.|.+.+.++++  +++.||++.
T Consensus         1 ~~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~--~----~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDAT   73 (248)
T PRK08057          1 MMPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG--P----ADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDAT   73 (248)
T ss_pred             CCceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC--c----ccCCceEEECCCCCHHHHHHHHHHCCCCEEEECC
Confidence            467899999986 69999999999999998877655322  1    11356777888878899999886  699999987


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEE
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL  134 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  134 (348)
                      .++.                     ..-+.++.++|++.+ .+-+-|
T Consensus        74 HPfA---------------------~~is~~a~~ac~~~~-ipyiR~   98 (248)
T PRK08057         74 HPYA---------------------AQISANAAAACRALG-IPYLRL   98 (248)
T ss_pred             CccH---------------------HHHHHHHHHHHHHhC-CcEEEE
Confidence            6432                     233678999999998 664444

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.36  E-value=0.0051  Score=58.06  Aligned_cols=177  Identities=21%  Similarity=0.163  Sum_probs=101.0

Q ss_pred             CcCCCCCCeEEEeCCC-ChhHHHHHHHHHHCCCeEEEEEcCCCcc--cc-ccccC----CCCCeEEEEccCCCcchHHHh
Q 035965            5 EESTGRSKTFCVTGAN-GYIGSWLVKTLLERGYIVHATVRDPGKL--QI-FSKWT----RSDRLRLFQADLQVEGSFDKA   76 (348)
Q Consensus         5 ~~~~~~~~~ilVtGat-GfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~-~~~~~----~~~~~~~~~~Dl~d~~~~~~~   76 (348)
                      .+.+...+..+||||+ |-||..+++.|++.|.+|+++.-+-++.  .+ ..++.    ....+-++..+.....++..+
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl  469 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL  469 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence            3344567789999975 8999999999999999999988654433  22 22222    123344555555544444443


Q ss_pred             hc---------------------CCCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhcC------C
Q 035965           77 VM---------------------GCDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE------S  128 (348)
Q Consensus        77 ~~---------------------~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~------~  128 (348)
                      ++                     .+|.+|-+|++... ....-++.++    ..+++=+.....++-..+..+      .
T Consensus       470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE----~~~rilLw~V~Rliggl~~~~s~r~v~~  545 (866)
T COG4982         470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAE----FAMRILLWNVLRLIGGLKKQGSSRGVDT  545 (866)
T ss_pred             HHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHH----HHHHHHHHHHHHHHHHhhhhccccCccc
Confidence            32                     25789999886432 2222221111    122222233334444443332      1


Q ss_pred             cceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCC----CcEEEEecCc
Q 035965          129 VKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENK----IDLVSVITTT  204 (348)
Q Consensus       129 ~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~----~~~~~lR~~~  204 (348)
                      .-++|...|-. -+...+                         ...|+.+|...|.++..|..+.+    +.++-.+.|+
T Consensus       546 R~hVVLPgSPN-rG~FGg-------------------------DGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGW  599 (866)
T COG4982         546 RLHVVLPGSPN-RGMFGG-------------------------DGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGW  599 (866)
T ss_pred             ceEEEecCCCC-CCccCC-------------------------CcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheee
Confidence            12455555532 222211                         23699999999999999877653    4455566777


Q ss_pred             cccCCCC
Q 035965          205 VAGPFLT  211 (348)
Q Consensus       205 v~G~~~~  211 (348)
                      +-|.+.-
T Consensus       600 trGTGLM  606 (866)
T COG4982         600 TRGTGLM  606 (866)
T ss_pred             ecccccc
Confidence            7776543

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.33  E-value=0.0019  Score=54.96  Aligned_cols=117  Identities=17%  Similarity=0.038  Sum_probs=75.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeE---EEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIV---HATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V---~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      .+-||.|.||.|.||..|...| +....|   ...|..........+ .+. +-........-.+.++++++++|+|+--
T Consensus        27 ~~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~GVaaDl-SHI-~T~s~V~g~~g~~~L~~al~~advVvIP  103 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTPGVAADL-SHI-NTNSSVVGFTGADGLENALKGADVVVIP  103 (345)
T ss_pred             CcceEEEEecCCccCccHHHHH-hcCcccceeeeeecccCCcccccc-ccc-CCCCceeccCChhHHHHHhcCCCEEEec
Confidence            3568999999999999998655 455443   334433221100000 000 1111122333346899999999999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      ||...-+..        .+++.+++|..-.+.|..++.+..+..++.++|-
T Consensus       104 AGVPRKPGM--------TRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN  146 (345)
T KOG1494|consen  104 AGVPRKPGM--------TRDDLFNINAGIVKTLAAAIAKCCPNALILVISN  146 (345)
T ss_pred             CCCCCCCCC--------cHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence            997554442        2248899999999999999998874555655553

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.33  E-value=0.0013  Score=59.92  Aligned_cols=171  Identities=14%  Similarity=0.044  Sum_probs=95.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-----eEEE--E--EcCCCcc--ccccccC----CCCCeEEEEccCCCcchHHH
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-----IVHA--T--VRDPGKL--QIFSKWT----RSDRLRLFQADLQVEGSFDK   75 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-----~V~~--~--~r~~~~~--~~~~~~~----~~~~~~~~~~Dl~d~~~~~~   75 (348)
                      .-||.|+|++|.+|++++..|+..|.     +|.+  +  +++.++.  ....+..    ...++.+...   +    .+
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~---~----y~  116 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID---P----YE  116 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence            45899999999999999999988763     2333  3  5544433  1111110    1112211111   1    34


Q ss_pred             hhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcc
Q 035965           76 AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        76 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      .++++|+||-+||......  .      .+.+.+..|+.-.+.+.+.+.++. +..++|.+|--.  .-...     ...
T Consensus       117 ~~kdaDIVVitAG~prkpg--~------tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPv--Dv~t~-----v~~  181 (387)
T TIGR01757       117 VFEDADWALLIGAKPRGPG--M------ERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPC--NTNAL-----IAM  181 (387)
T ss_pred             HhCCCCEEEECCCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcH--HHHHH-----HHH
Confidence            5779999999999743322  2      224789999999999999999854 345566666311  00000     000


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTS  212 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~  212 (348)
                      +.....+         ....=.-+.+..-++....++..+++...++-..|.|.....
T Consensus       182 k~sg~~~---------~rviG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGds  230 (387)
T TIGR01757       182 KNAPNIP---------RKNFHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHSTT  230 (387)
T ss_pred             HHcCCCc---------ccEEEecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCCc
Confidence            0110000         112222334444455555566667777777667788876543

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.32  E-value=0.0012  Score=59.99  Aligned_cols=98  Identities=18%  Similarity=0.167  Sum_probs=57.9

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHC-CCeEEEE-EcCCCcc-ccccccCCCCCeEEE-EccCCCcchHHHhhcCCCEEEEcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLER-GYIVHAT-VRDPGKL-QIFSKWTRSDRLRLF-QADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~-~r~~~~~-~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ++|+|.||||++|..+++.|.+. +.++..+ +++.+.. .+....   +.+... ..++.+. +..++.+++|+||-+.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~---~~l~~~~~~~~~~~-~~~~~~~~~DvVf~al   76 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVH---PHLRGLVDLNLEPI-DEEEIAEDADVVFLAL   76 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhC---ccccccCCceeecC-CHHHhhcCCCEEEECC
Confidence            47999999999999999999876 6688744 4433221 111111   111111 1112211 2233445799999886


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      ...                        ....++..+.+.|  +++|=.|+..
T Consensus        77 P~~------------------------~s~~~~~~~~~~G--~~VIDlS~~f  102 (346)
T TIGR01850        77 PHG------------------------VSAELAPELLAAG--VKVIDLSADF  102 (346)
T ss_pred             Cch------------------------HHHHHHHHHHhCC--CEEEeCChhh
Confidence            421                        1345666666666  7899999875

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.32  E-value=0.0017  Score=58.71  Aligned_cols=68  Identities=19%  Similarity=0.236  Sum_probs=44.7

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEE---EEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHA---TVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~---~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      +|+|.||||++|..|++.|.+++|.+..   +.+..........    .+.+....|+.     ...++++|+||-+++.
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~----~~~~~~~~~~~-----~~~~~~~D~v~~a~g~   71 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTF----KGKELEVNEAK-----IESFEGIDIALFSAGG   71 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeee----CCeeEEEEeCC-----hHHhcCCCEEEECCCH
Confidence            5899999999999999999998887543   3354332211111    13445555553     1234689999998873

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.28  E-value=0.0014  Score=62.12  Aligned_cols=74  Identities=22%  Similarity=0.365  Sum_probs=58.7

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a   87 (348)
                      .+++|+|.|+ |.+|..+++.|.+.|++|+++++++... .+...   ..++.++.+|.++.+.+.++ ++++|.||-+.
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~---~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~  305 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE---LPNTLVLHGDGTDQELLEEEGIDEADAFIALT  305 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---CCCCeEEECCCCCHHHHHhcCCccCCEEEECC
Confidence            4689999998 9999999999999999999999987644 22211   13678899999999888654 56799988543

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.28  E-value=0.0034  Score=56.74  Aligned_cols=28  Identities=18%  Similarity=0.467  Sum_probs=25.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCe
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYI   37 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~   37 (348)
                      +.++|+|.||||++|..|++.|.+++|.
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP   33 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFP   33 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCC
Confidence            4578999999999999999999988874

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.26  E-value=0.0033  Score=54.60  Aligned_cols=67  Identities=16%  Similarity=0.199  Sum_probs=45.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEE-cCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER-GYIVHATV-RDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |++|+|+|++|.+|+.+++.+.+. +.++.++. +++......           -..++...+++.++++++|+||+++.
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-----------~~~~i~~~~dl~~ll~~~DvVid~t~   69 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-----------GALGVAITDDLEAVLADADVLIDFTT   69 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-----------CCCCccccCCHHHhccCCCEEEECCC
Confidence            468999999999999999998864 68877654 444322110           11233334456666778999998874

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.26  E-value=0.00049  Score=68.94  Aligned_cols=167  Identities=16%  Similarity=0.156  Sum_probs=108.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCe-EEEEEcCCCccccc--cccCC-CCCeE--EEEccCCCcchHHHhhc------
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYI-VHATVRDPGKLQIF--SKWTR-SDRLR--LFQADLQVEGSFDKAVM------   78 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~-V~~~~r~~~~~~~~--~~~~~-~~~~~--~~~~Dl~d~~~~~~~~~------   78 (348)
                      .|..+|+||-|..|..|++-|.++|.+ ++..+|+.-+.-..  ....+ ..++.  +-.-|++..+....+++      
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcc
Confidence            467999999999999999999999975 55666654322000  00000 11333  33455555555555554      


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      -+-.|||+|+.......+..+.+++  ....+..+.+|.+|=+..++.- ..+.||.+||.+.=.++.            
T Consensus      1848 ~vGGiFnLA~VLRD~LiEnQt~knF--k~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~------------ 1913 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNF--KDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNA------------ 1913 (2376)
T ss_pred             cccchhhHHHHHHhhhhcccChhHH--HhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCC------------
Confidence            3678999999766555444444433  3555666788888888777653 467899999987322211            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCcc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTV  205 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v  205 (348)
                                   ..+-||.+..++|++++.- +..|++-+.+--|.|
T Consensus      1914 -------------GQtNYG~aNS~MERiceqR-r~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1914 -------------GQTNYGLANSAMERICEQR-RHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             -------------cccccchhhHHHHHHHHHh-hhcCCCcceeeeecc
Confidence                         1234999999999999884 445888777766554

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.23  E-value=0.0019  Score=57.37  Aligned_cols=108  Identities=13%  Similarity=0.064  Sum_probs=72.5

Q ss_pred             EEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc--cccccc---CCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           14 FCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL--QIFSKW---TRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      |.|.|+ |.+|+.++..|+..|  .++.+++++..+.  ....+.   ......+....  .|    .+.++++|+||.+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence            468886 899999999999888  7899999977643  111111   11011222211  11    2367899999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      ++......  .      .....+..|+.-.+.+.+.+++.++..++|.+|
T Consensus        74 ag~p~~~~--~------~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          74 AGAPRKPG--E------TRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             CCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            98643322  2      224778889999999999999887556666666

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.20  E-value=0.0079  Score=46.63  Aligned_cols=102  Identities=17%  Similarity=0.172  Sum_probs=65.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccc----c------------------CCCCCeEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSK----W------------------TRSDRLRLFQAD   66 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~----~------------------~~~~~~~~~~~D   66 (348)
                      .++|+|.|+ |-+|+.+++.|...|. +++++|.+.=.. .+.+.    .                  +..-+++.+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            468999996 9999999999999997 788888753211 11110    0                  011234555555


Q ss_pred             CCCcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           67 LQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        67 l~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      + +.+...++++++|+||.+...                       ...-..+-+.|++.+  ..+|+.++.+
T Consensus        81 ~-~~~~~~~~~~~~d~vi~~~d~-----------------------~~~~~~l~~~~~~~~--~p~i~~~~~g  127 (135)
T PF00899_consen   81 I-DEENIEELLKDYDIVIDCVDS-----------------------LAARLLLNEICREYG--IPFIDAGVNG  127 (135)
T ss_dssp             C-SHHHHHHHHHTSSEEEEESSS-----------------------HHHHHHHHHHHHHTT---EEEEEEEET
T ss_pred             c-ccccccccccCCCEEEEecCC-----------------------HHHHHHHHHHHHHcC--CCEEEEEeec
Confidence            5 345667778899999988542                       111235667788887  4688777654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.17  E-value=0.00064  Score=54.11  Aligned_cols=75  Identities=13%  Similarity=0.072  Sum_probs=51.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ...++|+|+|+ |.+|..+++.|.+.| ++|++++|++.+. .+....    ....+..+..+   ..+.++++|+||.+
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~Dvvi~~   88 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERF----GELGIAIAYLD---LEELLAEADLIINT   88 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH----hhcccceeecc---hhhccccCCEEEeC
Confidence            45689999997 999999999999986 8899999986544 222211    11111122333   34446789999999


Q ss_pred             cccCc
Q 035965           87 AASME   91 (348)
Q Consensus        87 a~~~~   91 (348)
                      .....
T Consensus        89 ~~~~~   93 (155)
T cd01065          89 TPVGM   93 (155)
T ss_pred             cCCCC
Confidence            87543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.17  E-value=0.0018  Score=57.26  Aligned_cols=36  Identities=19%  Similarity=0.189  Sum_probs=29.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDP   45 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~   45 (348)
                      +|+||.|.||+|+.|..|++.|...- .++..++.+.
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~   37 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRE   37 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence            47899999999999999999998773 4766555443

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.16  E-value=0.0033  Score=57.74  Aligned_cols=55  Identities=18%  Similarity=0.265  Sum_probs=44.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      .+++|.|.||.|.+|+.+++.|.+.|++|++.+|+..                        +...+++.++|+||-+..
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~------------------------~~~~~~~~~aDlVilavP  151 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW------------------------DRAEDILADAGMVIVSVP  151 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc------------------------hhHHHHHhcCCEEEEeCc
Confidence            4578999999999999999999999999999998531                        123445667888887764

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=97.14  E-value=0.0014  Score=58.37  Aligned_cols=108  Identities=13%  Similarity=0.094  Sum_probs=68.9

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc--ccccccC----CCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           14 FCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL--QIFSKWT----RSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      |.|+|+ |.+|+.++..|+..|. +|+++++++...  .......    .....++...  .|   . +.++++|+||.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t--~d---~-~~l~dADiVIit   73 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGT--ND---Y-EDIAGSDVVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEc--CC---H-HHhCCCCEEEEe
Confidence            568998 9999999999998876 999999986533  1111110    0011121110  11   3 346899999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      ++......  .      ...+.+..|+.-.+.+++.+.+..+...+|.+|
T Consensus        74 ~g~p~~~~--~------~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          74 AGIPRKPG--M------SRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             cCCCCCcC--C------CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            98643222  1      223566778888899999888877445555555

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.12  E-value=0.0029  Score=52.80  Aligned_cols=104  Identities=13%  Similarity=0.160  Sum_probs=65.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cccc--------------------ccCCCCCeE--EEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFS--------------------KWTRSDRLR--LFQ   64 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~--------------------~~~~~~~~~--~~~   64 (348)
                      ++.++|+|.|+ |-+|+++++.|...|. +++++|.+.-.. .+.+                    +....+.++  .+.
T Consensus        19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~   97 (202)
T TIGR02356        19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK   97 (202)
T ss_pred             hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence            35678999995 9999999999999996 889988763111 1110                    001112333  333


Q ss_pred             ccCCCcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           65 ADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        65 ~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      ..+. .+.+.+.++++|+||.+....                       ..-..+-+.|.+.+  ..+|+.++.+
T Consensus        98 ~~i~-~~~~~~~~~~~D~Vi~~~d~~-----------------------~~r~~l~~~~~~~~--ip~i~~~~~g  146 (202)
T TIGR02356        98 ERVT-AENLELLINNVDLVLDCTDNF-----------------------ATRYLINDACVALG--TPLISAAVVG  146 (202)
T ss_pred             hcCC-HHHHHHHHhCCCEEEECCCCH-----------------------HHHHHHHHHHHHcC--CCEEEEEecc
Confidence            3343 345667788999999875321                       11224566777777  4588877654

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.09  E-value=0.00046  Score=56.64  Aligned_cols=77  Identities=25%  Similarity=0.306  Sum_probs=41.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc--cCCCCCeE-EE-----EccCCCcchHHHhhcCCCE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK--WTRSDRLR-LF-----QADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~--~~~~~~~~-~~-----~~Dl~d~~~~~~~~~~~d~   82 (348)
                      |||.|.| .||+|..++..|++.||+|++++.++.+. .+..-  +...+++. .+     .+.+.-..++..+++++|+
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv   79 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV   79 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence            6899997 59999999999999999999999987644 22211  11111110 00     0111222345555667899


Q ss_pred             EEEcccc
Q 035965           83 VFHVAAS   89 (348)
Q Consensus        83 Vih~a~~   89 (348)
                      +|-+...
T Consensus        80 ~~I~VpT   86 (185)
T PF03721_consen   80 VFICVPT   86 (185)
T ss_dssp             EEE----
T ss_pred             EEEecCC
Confidence            9988874

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.08  E-value=0.0015  Score=60.82  Aligned_cols=38  Identities=24%  Similarity=0.230  Sum_probs=34.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      .+|+|.|.|. |++|..++..|++.||+|+++++++.+.
T Consensus         2 ~~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v   39 (415)
T PRK11064          2 SFETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAV   39 (415)
T ss_pred             CccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHH
Confidence            3578999985 9999999999999999999999987755

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.06  E-value=0.0025  Score=61.99  Aligned_cols=71  Identities=15%  Similarity=0.161  Sum_probs=57.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a   87 (348)
                      ..+|+|.|+ |-+|+++++.|.++|++|++++.++++. ...+     .+.+.+.+|.+|++.++++ ++++|.|+-+.
T Consensus       417 ~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-----~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~  489 (558)
T PRK10669        417 CNHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-----RGIRAVLGNAANEEIMQLAHLDCARWLLLTI  489 (558)
T ss_pred             CCCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-----CCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence            468999996 9999999999999999999999987655 3322     3688999999999988765 56788777553

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.04  E-value=0.0013  Score=57.83  Aligned_cols=75  Identities=16%  Similarity=0.230  Sum_probs=51.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ...+++++|+|+ |.+|+.++.+|...| .+|++++|+..+. .+.........+.+   ++    .....+.++|+||+
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~---~~----~~~~~~~~~DivIn  191 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL---DL----ELQEELADFDLIIN  191 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee---cc----cchhccccCCEEEE
Confidence            345789999997 999999999999999 7999999987655 33221110001111   11    22345567999999


Q ss_pred             ccccC
Q 035965           86 VAASM   90 (348)
Q Consensus        86 ~a~~~   90 (348)
                      +....
T Consensus       192 aTp~g  196 (278)
T PRK00258        192 ATSAG  196 (278)
T ss_pred             CCcCC
Confidence            98753

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.04  E-value=0.0025  Score=55.88  Aligned_cols=56  Identities=16%  Similarity=0.134  Sum_probs=46.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++|+|.|++|.+|+.++..|+++|.+|+++.|+.                         .++.+.++++|+||++.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-------------------------~~L~~~~~~aDIvI~At  210 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-------------------------QNLPELVKQADIIVGAV  210 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-------------------------hhHHHHhccCCEEEEcc
Confidence            45688999999999999999999999999999888732                         13555667899999998


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      +
T Consensus       211 G  211 (283)
T PRK14192        211 G  211 (283)
T ss_pred             C
Confidence            6

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.99  E-value=0.0017  Score=53.46  Aligned_cols=67  Identities=21%  Similarity=0.105  Sum_probs=44.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ||++.|. |+|-||+.|++.|.+.||+|++.+|+.++. ...... ..+.       + ...+..++.+.+|+||-..
T Consensus         1 m~~~~i~-GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~-l~~~-------i-~~~~~~dA~~~aDVVvLAV   68 (211)
T COG2085           1 MMIIAII-GTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAA-LGPL-------I-TGGSNEDAAALADVVVLAV   68 (211)
T ss_pred             CcEEEEe-ccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHh-hccc-------c-ccCChHHHHhcCCEEEEec
Confidence            4667764 579999999999999999999997766544 211111 0011       1 1234556777899999765

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.98  E-value=0.0029  Score=58.21  Aligned_cols=66  Identities=23%  Similarity=0.278  Sum_probs=53.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      |++|+|.|| |.+|+.+++.+.+.|++|++++.++... ...       .-.++.+|..|.+.+.++++.+|+|.
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~-------ad~~~~~~~~D~~~l~~~a~~~dvit   68 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV-------ADEVIVADYDDVAALRELAEQCDVIT   68 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh-------CceEEecCCCCHHHHHHHHhcCCEEE
Confidence            578999998 8999999999999999999999865432 111       12456789999999999999999875

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.96  E-value=0.004  Score=54.25  Aligned_cols=101  Identities=15%  Similarity=0.123  Sum_probs=70.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      -++++.|+|+.| +|+--++.-.+-|++|++++++..+. +..+..    +.+.+..-..|++.+.++.+.-|.++|++.
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L----GAd~fv~~~~d~d~~~~~~~~~dg~~~~v~  255 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL----GADVFVDSTEDPDIMKAIMKTTDGGIDTVS  255 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc----CcceeEEecCCHHHHHHHHHhhcCcceeee
Confidence            368999999988 99988888888899999999987544 333211    456665555588888888777788888876


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      ......                     ...+++.++..|   ++|+++-..
T Consensus       256 ~~a~~~---------------------~~~~~~~lk~~G---t~V~vg~p~  282 (360)
T KOG0023|consen  256 NLAEHA---------------------LEPLLGLLKVNG---TLVLVGLPE  282 (360)
T ss_pred             eccccc---------------------hHHHHHHhhcCC---EEEEEeCcC
Confidence            442111                     123566665555   888877543

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.96  E-value=0.0036  Score=50.38  Aligned_cols=58  Identities=19%  Similarity=0.175  Sum_probs=47.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++|+|.|+.+.+|..+++.|.++|.+|+++.|+.                         +.+.+.+.++|+||.+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-------------------------~~l~~~l~~aDiVIsat   95 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-------------------------KNLKEHTKQADIVIVAV   95 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-------------------------hhHHHHHhhCCEEEEcC
Confidence            35679999999966789999999999999999888752                         24566778899999988


Q ss_pred             ccC
Q 035965           88 ASM   90 (348)
Q Consensus        88 ~~~   90 (348)
                      +..
T Consensus        96 ~~~   98 (168)
T cd01080          96 GKP   98 (168)
T ss_pred             CCC
Confidence            753

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.95  E-value=0.0041  Score=58.78  Aligned_cols=75  Identities=13%  Similarity=-0.020  Sum_probs=49.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc-ccccCCCCCeEEEEccCCCcchHHHhhc-CCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM-GCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~Vih   85 (348)
                      +++++|+|||+.| +|...++.|++.|++|++.+++.... .. ..+.  ..++++..+...  ..   .+. ++|.||.
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~--~~g~~~~~~~~~--~~---~~~~~~d~vV~   74 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELL--EEGIKVICGSHP--LE---LLDEDFDLMVK   74 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHH--hcCCEEEeCCCC--HH---HhcCcCCEEEE
Confidence            4568999999977 99999999999999999999765322 11 1111  114455443211  11   123 4899999


Q ss_pred             ccccCc
Q 035965           86 VAASME   91 (348)
Q Consensus        86 ~a~~~~   91 (348)
                      .+|...
T Consensus        75 s~gi~~   80 (447)
T PRK02472         75 NPGIPY   80 (447)
T ss_pred             CCCCCC
Confidence            998653

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.93  E-value=0.0054  Score=52.27  Aligned_cols=104  Identities=18%  Similarity=0.239  Sum_probs=64.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cccccc--------------------CCCC--CeEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKW--------------------TRSD--RLRLFQ   64 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~--------------------~~~~--~~~~~~   64 (348)
                      ++..+|+|.|+ |-+|+++++.|+..|. +++++|.+.-.. .+.+..                    ...+  +++.+.
T Consensus        19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            34679999995 9999999999999996 677776543111 111100                    0112  344444


Q ss_pred             ccCCCcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           65 ADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        65 ~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      .+++ .+.+.++++++|+||.+....                       ..-..+-+.|.+.+  ..+|+.+..+
T Consensus        98 ~~i~-~~~~~~~~~~~DvVi~~~d~~-----------------------~~r~~l~~~~~~~~--ip~i~~g~~g  146 (228)
T cd00757          98 ERLD-AENAEELIAGYDLVLDCTDNF-----------------------ATRYLINDACVKLG--KPLVSGAVLG  146 (228)
T ss_pred             ceeC-HHHHHHHHhCCCEEEEcCCCH-----------------------HHHHHHHHHHHHcC--CCEEEEEecc
Confidence            4443 345667788899999886421                       11224666777777  4577776654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.92  E-value=0.0016  Score=60.47  Aligned_cols=173  Identities=12%  Similarity=0.076  Sum_probs=99.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC---C--Ce--EEEEEcC--CCcc-----cccccc-CCCCCeEEEEccCCCcchHHH
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER---G--YI--VHATVRD--PGKL-----QIFSKW-TRSDRLRLFQADLQVEGSFDK   75 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~---g--~~--V~~~~r~--~~~~-----~~~~~~-~~~~~~~~~~~Dl~d~~~~~~   75 (348)
                      +-+|+||||+|.||.+|+-.++.-   |  ..  +++++..  ....     ++.... ....++.+..       ...+
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~-------~~~e  195 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT-------DLDV  195 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE-------CCHH
Confidence            458999999999999999888752   3  23  4455552  2111     111111 0111232221       1245


Q ss_pred             hhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCC-cceEEEeccceeeeecCCCCCCCCcc
Q 035965           76 AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES-VKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        76 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      .++++|+||-+||......  .      .....++.|+.-.+...++..+.+. -.+++.+.|-= +.....     ...
T Consensus       196 a~~daDvvIitag~prk~G--~------~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNP-vD~~t~-----i~~  261 (452)
T cd05295         196 AFKDAHVIVLLDDFLIKEG--E------DLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTF-LNLKTS-----ILI  261 (452)
T ss_pred             HhCCCCEEEECCCCCCCcC--C------CHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCc-HHHHHH-----HHH
Confidence            6789999999999743322  2      2348899999999999999998873 15666666511 000000     001


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS  213 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~  213 (348)
                      +...-.         ++...-|.+.+..-++....++..+++...++-..|.|......
T Consensus       262 k~apgi---------P~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~sq  311 (452)
T cd05295         262 KYAPSI---------PRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGGNT  311 (452)
T ss_pred             HHcCCC---------CHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCCce
Confidence            111000         02334455555545555566777788888888788889865543

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.84  E-value=0.0053  Score=54.84  Aligned_cols=77  Identities=26%  Similarity=0.214  Sum_probs=49.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc--------ccCCCCCeEEEEccCCCcchHHHhhcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS--------KWTRSDRLRLFQADLQVEGSFDKAVMGCD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~--------~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   81 (348)
                      .++|.|.|+ |-+|+.++..|+..|++|++.++++... ....        ..............+.-..+++++++++|
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD   85 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD   85 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence            478999996 9999999999999999999999986532 1110        00000000000011122235667888999


Q ss_pred             EEEEccc
Q 035965           82 GVFHVAA   88 (348)
Q Consensus        82 ~Vih~a~   88 (348)
                      .|+-++.
T Consensus        86 lViEavp   92 (321)
T PRK07066         86 FIQESAP   92 (321)
T ss_pred             EEEECCc
Confidence            9998864

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.83  E-value=0.0027  Score=55.92  Aligned_cols=70  Identities=23%  Similarity=0.225  Sum_probs=51.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      +..+++++|+|. |.+|+.+++.|...|.+|++++|++.+. .....     +...+     +.+++.+.++++|+||++
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~-----g~~~~-----~~~~l~~~l~~aDiVint  216 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEM-----GLIPF-----PLNKLEEKVAEIDIVINT  216 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-----CCeee-----cHHHHHHHhccCCEEEEC
Confidence            456789999997 9999999999999999999999987543 21110     12211     234566778899999997


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      ..
T Consensus       217 ~P  218 (287)
T TIGR02853       217 IP  218 (287)
T ss_pred             CC
Confidence            63

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.83  E-value=0.0031  Score=52.45  Aligned_cols=41  Identities=27%  Similarity=0.318  Sum_probs=35.6

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      ..+++|+|+|+|. |-+|+++++.|.+.|++|++.++++.+.
T Consensus        24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~   64 (200)
T cd01075          24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAV   64 (200)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence            4567889999997 8999999999999999999998876543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.82  E-value=0.0098  Score=52.78  Aligned_cols=162  Identities=14%  Similarity=0.064  Sum_probs=93.9

Q ss_pred             EeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc--ccccccC----CCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           16 VTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL--QIFSKWT----RSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        16 VtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~--~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |.|+ |.||++++..|+..+.  ++.++++...+.  ....+..    ....+++..   .|    .+.++++|+||-+|
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~daDivVita   72 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GD----YSDCKDADLVVITA   72 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CC----HHHHCCCCEEEECC
Confidence            4565 9999999999988774  799999866533  2221111    011223221   12    24577999999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      |......  .      .....+..|+.-.+.+.+.+.+.++...+|.+|--.-.  ...     ...+...++       
T Consensus        73 g~~rk~g--~------~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~--~t~-----~~~~~sg~p-------  130 (299)
T TIGR01771        73 GAPQKPG--E------TRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDI--LTY-----VAWKLSGFP-------  130 (299)
T ss_pred             CCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHH--HHH-----HHHHHhCCC-------
Confidence            9743322  2      22478999999999999999988755666666632100  000     000111100       


Q ss_pred             cCCCcchhHh-hHHHHHHHHHHHHHhCCCcEEEEecCccccCCCC
Q 035965          168 KKASGWVYVL-SKLLSEETAFKFANENKIDLVSVITTTVAGPFLT  211 (348)
Q Consensus       168 ~~~~~~~Y~~-sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~  211 (348)
                         +....|. +.+..-++-...++..+++..-++. .|+|.+..
T Consensus       131 ---~~~viG~gt~LDs~R~~~~la~~l~v~~~~V~~-~v~GeHG~  171 (299)
T TIGR01771       131 ---KNRVIGSGTVLDTARLRYLLAEKLGVDPQSVHA-YIIGEHGD  171 (299)
T ss_pred             ---HHHEEeccchHHHHHHHHHHHHHhCcCcCeEEE-EEEecCCC
Confidence               1112333 3333445555556666777777775 48887644

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.81  E-value=0.0072  Score=53.88  Aligned_cols=71  Identities=20%  Similarity=0.125  Sum_probs=52.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      +++|+|+|+ |.+|..-++.+...|.+|++++|++++. ...++     +.+.+...- |.+..+.+-+.+|+|+.+++
T Consensus       167 G~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l-----GAd~~i~~~-~~~~~~~~~~~~d~ii~tv~  238 (339)
T COG1064         167 GKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL-----GADHVINSS-DSDALEAVKEIADAIIDTVG  238 (339)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh-----CCcEEEEcC-CchhhHHhHhhCcEEEECCC
Confidence            578999998 6999999999988999999999998876 33322     233332222 55555555445999999987

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.80  E-value=0.011  Score=53.72  Aligned_cols=33  Identities=27%  Similarity=0.407  Sum_probs=27.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG-YIVHATVRD   44 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~   44 (348)
                      ++|+|+|++|++|++|++.|.... .+|..+..+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~   34 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS   34 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence            479999999999999999988865 588877543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.80  E-value=0.0052  Score=60.11  Aligned_cols=72  Identities=13%  Similarity=0.203  Sum_probs=58.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a   87 (348)
                      .++|+|.|. |-+|+.+++.|.++|+++++++++++..+..+.    .+...+.+|.+|++.++++ ++++|.|+-+.
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~g~~v~~GDat~~~~L~~agi~~A~~vv~~~  472 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRK----YGYKVYYGDATQLELLRAAGAEKAEAIVITC  472 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----CCCeEEEeeCCCHHHHHhcCCccCCEEEEEe
Confidence            468999995 999999999999999999999998775522222    2678999999999988875 66889888664

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.79  E-value=0.0059  Score=56.67  Aligned_cols=75  Identities=13%  Similarity=0.052  Sum_probs=55.7

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVF   84 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vi   84 (348)
                      ...++|+|+|+|+ |.+|..+++.+.+.|++|++++.++...... .     .-.++..|..|.+.+.++++  ++|.|+
T Consensus         8 ~~~~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~-~-----ad~~~~~~~~d~~~l~~~~~~~~id~vi   80 (395)
T PRK09288          8 LSPSATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ-V-----AHRSHVIDMLDGDALRAVIEREKPDYIV   80 (395)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHH-h-----hhheEECCCCCHHHHHHHHHHhCCCEEE
Confidence            3345679999996 8999999999999999999999876432111 0     01356788889888888777  799988


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      -...
T Consensus        81 ~~~e   84 (395)
T PRK09288         81 PEIE   84 (395)
T ss_pred             EeeC
Confidence            6543

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.79  E-value=0.0058  Score=53.34  Aligned_cols=58  Identities=16%  Similarity=0.135  Sum_probs=49.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++|+|+|+++.+|+.++..|.++|.+|+++.++.                         ..+.+.++++|+||.+.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-------------------------~~l~~~~~~ADIVIsAv  209 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-------------------------KDMASYLKDADVIVSAV  209 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------------------hhHHHHHhhCCEEEECC
Confidence            45789999999999999999999999999999988642                         14667788899999998


Q ss_pred             ccC
Q 035965           88 ASM   90 (348)
Q Consensus        88 ~~~   90 (348)
                      +..
T Consensus       210 g~p  212 (286)
T PRK14175        210 GKP  212 (286)
T ss_pred             CCC
Confidence            853

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.77  E-value=0.0065  Score=54.68  Aligned_cols=78  Identities=26%  Similarity=0.285  Sum_probs=52.5

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc--cCCCCCeE-EEE---cc--CCCcchHHHhhcCCCE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK--WTRSDRLR-LFQ---AD--LQVEGSFDKAVMGCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~--~~~~~~~~-~~~---~D--l~d~~~~~~~~~~~d~   82 (348)
                      |||.|.| +||+|....--|++.||+|++++.++.+. .+..-  |-..++++ +++   .+  ++-..+..+++++.|+
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv   79 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV   79 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence            6899999 59999999999999999999999988765 22221  11111221 111   11  2223456777888999


Q ss_pred             EEEccccC
Q 035965           83 VFHVAASM   90 (348)
Q Consensus        83 Vih~a~~~   90 (348)
                      +|-+.+..
T Consensus        80 ~fIavgTP   87 (414)
T COG1004          80 VFIAVGTP   87 (414)
T ss_pred             EEEEcCCC
Confidence            99988753

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.75  E-value=0.0021  Score=54.42  Aligned_cols=37  Identities=27%  Similarity=0.264  Sum_probs=33.5

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      |+|.|+||+|.+|+.++..|.+.|++|++.+|++.+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~   37 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKA   37 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHH
Confidence            4799999999999999999999999999999987554

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.75  E-value=0.0035  Score=54.93  Aligned_cols=73  Identities=15%  Similarity=0.214  Sum_probs=48.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      .+++++|+|+ |.+|+.++..|++.|++|++++|+..+. .+.........+...  ++.+     ....++|+||++.+
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~~~-----~~~~~~DivInatp  187 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SMDE-----LPLHRVDLIINATS  187 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--chhh-----hcccCccEEEECCC
Confidence            3678999998 8999999999999999999999987654 322211111111221  1111     12346899999987


Q ss_pred             cC
Q 035965           89 SM   90 (348)
Q Consensus        89 ~~   90 (348)
                      ..
T Consensus       188 ~g  189 (270)
T TIGR00507       188 AG  189 (270)
T ss_pred             CC
Confidence            64

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.74  E-value=0.012  Score=50.96  Aligned_cols=35  Identities=29%  Similarity=0.529  Sum_probs=30.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDP   45 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~   45 (348)
                      +..+|+|.|+ |.+|+++++.|+..| -++++++.+.
T Consensus        29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~   64 (268)
T PRK15116         29 ADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDD   64 (268)
T ss_pred             cCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            4678999996 999999999999999 5888888653

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.72  E-value=0.018  Score=47.86  Aligned_cols=106  Identities=15%  Similarity=0.184  Sum_probs=64.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccc----------------------cCCCCC--eEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSK----------------------WTRSDR--LRLF   63 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~----------------------~~~~~~--~~~~   63 (348)
                      +..+|+|.|+.| +|+++++.|+..|. +++++|.+.-.. .+.+.                      ....+.  ++.+
T Consensus        18 ~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~   96 (198)
T cd01485          18 RSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV   96 (198)
T ss_pred             hhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            457899999855 99999999999996 688888653211 11110                      001133  3344


Q ss_pred             EccCCC-cchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceee
Q 035965           64 QADLQV-EGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTI  141 (348)
Q Consensus        64 ~~Dl~d-~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~  141 (348)
                      ..++.+ .+...+.++++|+||.+...                       ......+-+.|++.+  ..+|+.++.+.+
T Consensus        97 ~~~~~~~~~~~~~~~~~~dvVi~~~d~-----------------------~~~~~~ln~~c~~~~--ip~i~~~~~G~~  150 (198)
T cd01485          97 EEDSLSNDSNIEEYLQKFTLVIATEEN-----------------------YERTAKVNDVCRKHH--IPFISCATYGLI  150 (198)
T ss_pred             ecccccchhhHHHHHhCCCEEEECCCC-----------------------HHHHHHHHHHHHHcC--CCEEEEEeecCE
Confidence            444432 33455667788888866321                       111234667787777  468888876643

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.72  E-value=0.04  Score=43.12  Aligned_cols=100  Identities=17%  Similarity=0.216  Sum_probs=61.8

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cccccc--------------------CCCCC--eEEEEccCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKW--------------------TRSDR--LRLFQADLQ   68 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~--------------------~~~~~--~~~~~~Dl~   68 (348)
                      +|+|.|+ |-+|+++++.|...|. ++++++.+.-.. .+.+..                    ...+.  ++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899996 9999999999999997 688888653111 111000                    01123  333444444


Q ss_pred             CcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           69 VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        69 d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      +. ...+.+.++|+||.+...                       ......+-++|++.+  ..+|..++..
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~-----------------------~~~~~~l~~~~~~~~--i~~i~~~~~g  124 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDN-----------------------IAVRRALNRACKELG--IPVIDAGGLG  124 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCC-----------------------HHHHHHHHHHHHHcC--CCEEEEcCCC
Confidence            32 235567789999988652                       112345777888777  4577777754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.70  E-value=0.012  Score=50.69  Aligned_cols=97  Identities=20%  Similarity=0.254  Sum_probs=68.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAAS   89 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~~   89 (348)
                      |+|||.|||+ =|+.|++.|.++|+ |++..-..-......  ...+....+.+-+.|.+.+.++++  +++.||++..+
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~~--~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHP   76 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGGELLK--PELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHP   76 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhhc--cccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCc
Confidence            6899999986 59999999999998 665554332221111  011356778888878899999885  79999998764


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEE
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL  134 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  134 (348)
                      +.                     ..-+.++.++|++.+ ++-+-|
T Consensus        77 fA---------------------~~is~na~~a~~~~~-ipylR~   99 (249)
T PF02571_consen   77 FA---------------------AEISQNAIEACRELG-IPYLRF   99 (249)
T ss_pred             hH---------------------HHHHHHHHHHHhhcC-cceEEE
Confidence            32                     233678999999988 654443

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.68  E-value=0.0049  Score=54.68  Aligned_cols=70  Identities=26%  Similarity=0.245  Sum_probs=51.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      +..+++++|+|. |.+|..+++.|...|.+|++++|++.+. .....     +.+++     +.+.+.+.+.++|+||++
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~-----G~~~~-----~~~~l~~~l~~aDiVI~t  217 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEM-----GLSPF-----HLSELAEEVGKIDIIFNT  217 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-----CCeee-----cHHHHHHHhCCCCEEEEC
Confidence            345789999996 8999999999999999999999986543 22111     22322     123566778899999998


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      +.
T Consensus       218 ~p  219 (296)
T PRK08306        218 IP  219 (296)
T ss_pred             CC
Confidence            53

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.66  E-value=0.0071  Score=57.07  Aligned_cols=79  Identities=19%  Similarity=0.188  Sum_probs=49.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCCCcc-cccccc--CCCCCeEEE----Ecc-CCCcchHHHhhcCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDPGKL-QIFSKW--TRSDRLRLF----QAD-LQVEGSFDKAVMGC   80 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~~~~-~~~~~~--~~~~~~~~~----~~D-l~d~~~~~~~~~~~   80 (348)
                      ||+|.|.|. |++|..++..|++.  |++|++++.++.+. .+..-.  ...++++-+    .+. ++-..++.++++++
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a   79 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA   79 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence            468999985 99999999999988  48899999987655 222110  001111100    010 11112345567789


Q ss_pred             CEEEEccccC
Q 035965           81 DGVFHVAASM   90 (348)
Q Consensus        81 d~Vih~a~~~   90 (348)
                      |++|-|.+..
T Consensus        80 dvi~I~V~TP   89 (473)
T PLN02353         80 DIVFVSVNTP   89 (473)
T ss_pred             CEEEEEeCCC
Confidence            9999988743

>PRK08223 hypothetical protein; Validated

Probab=96.65  E-value=0.027  Score=49.25  Aligned_cols=105  Identities=16%  Similarity=0.176  Sum_probs=63.7

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cccccc--------------------CCCCC--eEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKW--------------------TRSDR--LRLFQA   65 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~--------------------~~~~~--~~~~~~   65 (348)
                      +..+|+|.|+ |.+|+++++.|+..|. ++.++|.+.-+. .+.+..                    ...+.  ++.+..
T Consensus        26 ~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~  104 (287)
T PRK08223         26 RNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPE  104 (287)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence            4678999996 9999999999999996 677777653211 111110                    01133  444444


Q ss_pred             cCCCcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           66 DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        66 Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      .++. +...++++++|+|+.+.-...                     ...-..+-++|.+.+  ..+|+.|...
T Consensus       105 ~l~~-~n~~~ll~~~DlVvD~~D~~~---------------------~~~r~~ln~~c~~~~--iP~V~~~~~g  154 (287)
T PRK08223        105 GIGK-ENADAFLDGVDVYVDGLDFFE---------------------FDARRLVFAACQQRG--IPALTAAPLG  154 (287)
T ss_pred             ccCc-cCHHHHHhCCCEEEECCCCCc---------------------HHHHHHHHHHHHHcC--CCEEEEeccC
Confidence            4543 456677888999986542110                     111234667788777  4577765544

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.62  E-value=0.0041  Score=58.31  Aligned_cols=66  Identities=24%  Similarity=0.373  Sum_probs=47.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |+|.|+||+|.+|+.+++.|.+.|++|++++|++... ......    ++.+       ..+..+++.++|+||-+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~----gv~~-------~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKEL----GVEY-------ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHc----CCee-------ccCHHHHhccCCEEEEecC
Confidence            4799999999999999999999999999999986543 211110    1211       1234455678899987764

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.60  E-value=0.0059  Score=53.93  Aligned_cols=37  Identities=19%  Similarity=0.152  Sum_probs=33.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      +++|.|.|+ |.+|+.++..|+..|++|++.++++...
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~   41 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELA   41 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            468999997 9999999999999999999999987643

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.59  E-value=0.042  Score=47.12  Aligned_cols=104  Identities=13%  Similarity=0.184  Sum_probs=62.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cccccc--------------------CCCCCeE--EEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKW--------------------TRSDRLR--LFQ   64 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~--------------------~~~~~~~--~~~   64 (348)
                      .+..+|+|.|+ |.+|+++++.|+..|. +++++|.+.-+. .+.+..                    ...+.++  .+.
T Consensus        22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~  100 (240)
T TIGR02355        22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN  100 (240)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            34678999996 9999999999999995 778887653221 111100                    0113333  333


Q ss_pred             ccCCCcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           65 ADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        65 ~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      ..++ .+.+.++++++|+||.+...                       ...-..+-++|.+.+  ..+|+.++.+
T Consensus       101 ~~i~-~~~~~~~~~~~DlVvd~~D~-----------------------~~~r~~ln~~~~~~~--ip~v~~~~~g  149 (240)
T TIGR02355       101 AKLD-DAELAALIAEHDIVVDCTDN-----------------------VEVRNQLNRQCFAAK--VPLVSGAAIR  149 (240)
T ss_pred             ccCC-HHHHHHHhhcCCEEEEcCCC-----------------------HHHHHHHHHHHHHcC--CCEEEEEecc
Confidence            3332 34566677888999887532                       111234556777777  4577766544

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.58  E-value=0.012  Score=44.79  Aligned_cols=30  Identities=33%  Similarity=0.585  Sum_probs=26.4

Q ss_pred             eEEEeCCCChhHHHHHHHHHHC-CCeEEEEE
Q 035965           13 TFCVTGANGYIGSWLVKTLLER-GYIVHATV   42 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~   42 (348)
                      +|.|+|++|.+|..+++.|.+. ++++.++.
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~   31 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALA   31 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEE
Confidence            5889999999999999999984 88888873

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.58  E-value=0.017  Score=48.45  Aligned_cols=34  Identities=24%  Similarity=0.307  Sum_probs=29.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRD   44 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~   44 (348)
                      +..+|+|.|+ |.+|+++++.|...|. +++++|.+
T Consensus        27 ~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4678999996 9999999999999997 58888876

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.58  E-value=0.02  Score=50.79  Aligned_cols=83  Identities=13%  Similarity=0.086  Sum_probs=52.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ||.+|.|.||||++|..|++.|.++.+ ++..+..+..+                  ++.+   ....+.++|+||-+..
T Consensus         1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~------------------~~~~---~~~~~~~~DvvFlalp   59 (313)
T PRK11863          1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK------------------DAAA---RRELLNAADVAILCLP   59 (313)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC------------------cccC---chhhhcCCCEEEECCC
Confidence            467999999999999999998887653 55555433221                  1111   2234467899997763


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      ..                        .+..+...+.+.|  .++|=.|+..
T Consensus        60 ~~------------------------~s~~~~~~~~~~g--~~VIDlSadf   84 (313)
T PRK11863         60 DD------------------------AAREAVALIDNPA--TRVIDASTAH   84 (313)
T ss_pred             HH------------------------HHHHHHHHHHhCC--CEEEECChhh
Confidence            11                        0223444444555  5788888875

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.58  E-value=0.0021  Score=51.63  Aligned_cols=65  Identities=25%  Similarity=0.274  Sum_probs=45.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |++|.+.|- |-+|+.+++.|+++||+|++.+|++.+. .+...     +++       -.++..++++++|+||-+..
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-----g~~-------~~~s~~e~~~~~dvvi~~v~   66 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA-----GAE-------VADSPAEAAEQADVVILCVP   66 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT-----TEE-------EESSHHHHHHHBSEEEE-SS
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh-----hhh-------hhhhhhhHhhcccceEeecc
Confidence            679999995 9999999999999999999999987655 33321     211       12356667777899987754

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.55  E-value=0.0077  Score=54.24  Aligned_cols=72  Identities=24%  Similarity=0.237  Sum_probs=46.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccc-cccccCCCCCeEEEEccCCCcc---hHHHhhc--CCCEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ-IFSKWTRSDRLRLFQADLQVEG---SFDKAVM--GCDGVF   84 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~--~~d~Vi   84 (348)
                      +.+|||+||+|-+|+..++-+...|+.++++..+..+.. ..++     +.. +..|..+.+   .+.++..  ++|+|+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~l-----GAd-~vi~y~~~~~~~~v~~~t~g~gvDvv~  216 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKEL-----GAD-HVINYREEDFVEQVRELTGGKGVDVVL  216 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhc-----CCC-EEEcCCcccHHHHHHHHcCCCCceEEE
Confidence            579999999999999999999999977776666554442 2222     111 112223322   2333332  599999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      ...+
T Consensus       217 D~vG  220 (326)
T COG0604         217 DTVG  220 (326)
T ss_pred             ECCC
Confidence            9987

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.55  E-value=0.012  Score=54.91  Aligned_cols=77  Identities=19%  Similarity=0.254  Sum_probs=48.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccccc--CCCCCeEE-----E-EccCCCcchHHHhhcCCCE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKW--TRSDRLRL-----F-QADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~--~~~~~~~~-----~-~~Dl~d~~~~~~~~~~~d~   82 (348)
                      |+|.|.|. |++|..++..|++.||+|+++++++.+. .+....  ...++++-     + .+-++-..+..++++++|+
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv   79 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV   79 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence            47999985 9999999999999999999999987654 222110  00001000     0 0101111244556778999


Q ss_pred             EEEcccc
Q 035965           83 VFHVAAS   89 (348)
Q Consensus        83 Vih~a~~   89 (348)
                      ||-+...
T Consensus        80 vii~vpt   86 (411)
T TIGR03026        80 IIICVPT   86 (411)
T ss_pred             EEEEeCC
Confidence            9988764

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.54  E-value=0.0079  Score=55.11  Aligned_cols=74  Identities=15%  Similarity=0.131  Sum_probs=54.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ...+|+|+|+ |-+|...++.|...|.+|++++|++.+. .+....    . ..+..+..+.+.+.+.+.++|+||+++.
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~----g-~~v~~~~~~~~~l~~~l~~aDvVI~a~~  239 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF----G-GRIHTRYSNAYEIEDAVKRADLLIGAVL  239 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc----C-ceeEeccCCHHHHHHHHccCCEEEEccc
Confidence            4567999987 9999999999999999999999976543 221111    1 1123445566778888889999999875


Q ss_pred             c
Q 035965           89 S   89 (348)
Q Consensus        89 ~   89 (348)
                      .
T Consensus       240 ~  240 (370)
T TIGR00518       240 I  240 (370)
T ss_pred             c
Confidence            4

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.53  E-value=0.0095  Score=52.33  Aligned_cols=57  Identities=16%  Similarity=0.093  Sum_probs=48.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+|+|.|.|.+|.+|+.++..|+++|++|+++.+...                         ++.++.+.+|+||-+.
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-------------------------~l~e~~~~ADIVIsav  210 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-------------------------DAKALCRQADIVVAAV  210 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-------------------------CHHHHHhcCCEEEEec
Confidence            456899999999999999999999999999999976531                         3566677889999888


Q ss_pred             cc
Q 035965           88 AS   89 (348)
Q Consensus        88 ~~   89 (348)
                      +.
T Consensus       211 g~  212 (301)
T PRK14194        211 GR  212 (301)
T ss_pred             CC
Confidence            74

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.53  E-value=0.019  Score=51.57  Aligned_cols=95  Identities=16%  Similarity=0.135  Sum_probs=55.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC---eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY---IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      +.++|.|.||||++|..|++.|.++.|   ++..+....+.........  ..+.+.  ++   +.  ..+.++|+||-+
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~--~~~~v~--~~---~~--~~~~~~Dvvf~a   73 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGG--KSVTVQ--DA---AE--FDWSQAQLAFFV   73 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECC--cceEEE--eC---ch--hhccCCCEEEEC
Confidence            467999999999999999999988544   5555543322221111110  112221  22   11  123578999987


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      ++..                        .+..+...+.+.|  .++|=.|+..
T Consensus        74 ~p~~------------------------~s~~~~~~~~~~g--~~VIDlS~~f  100 (336)
T PRK08040         74 AGRE------------------------ASAAYAEEATNAG--CLVIDSSGLF  100 (336)
T ss_pred             CCHH------------------------HHHHHHHHHHHCC--CEEEECChHh
Confidence            7521                        1234555555556  5788888865

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.51  E-value=0.016  Score=46.09  Aligned_cols=59  Identities=19%  Similarity=0.201  Sum_probs=44.6

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+|+|+|.|.+..+|..|+..|.++|..|+.+....                         .++.+.++.+|+||-++
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T-------------------------~~l~~~~~~ADIVVsa~   87 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT-------------------------KNLQEITRRADIVVSAV   87 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS-------------------------SSHHHHHTTSSEEEE-S
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC-------------------------CcccceeeeccEEeeee
Confidence            46789999999999999999999999999998877643                         23566778899999988


Q ss_pred             ccCc
Q 035965           88 ASME   91 (348)
Q Consensus        88 ~~~~   91 (348)
                      |...
T Consensus        88 G~~~   91 (160)
T PF02882_consen   88 GKPN   91 (160)
T ss_dssp             SSTT
T ss_pred             cccc
Confidence            8643

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.50  E-value=0.052  Score=45.02  Aligned_cols=104  Identities=14%  Similarity=0.118  Sum_probs=62.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccc--------------------cCCCC--CeEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSK--------------------WTRSD--RLRLFQA   65 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~--------------------~~~~~--~~~~~~~   65 (348)
                      +.++|+|.|+. -+|+++++.|+..|. +++++|.+.-.. .+.+.                    ....+  +++.+..
T Consensus        20 ~~s~VlIiG~g-glG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~   98 (197)
T cd01492          20 RSARILLIGLK-GLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD   98 (197)
T ss_pred             HhCcEEEEcCC-HHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec
Confidence            46789999974 499999999999996 688888653211 11110                    00112  3344444


Q ss_pred             cCCCcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceee
Q 035965           66 DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTI  141 (348)
Q Consensus        66 Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~  141 (348)
                      .+.+  ...+.++++|+||.+...                       ...-..+-+.|++.+ . .+|+.++.+.+
T Consensus        99 ~~~~--~~~~~~~~~dvVi~~~~~-----------------------~~~~~~ln~~c~~~~-i-p~i~~~~~G~~  147 (197)
T cd01492          99 DISE--KPEEFFSQFDVVVATELS-----------------------RAELVKINELCRKLG-V-KFYATGVHGLF  147 (197)
T ss_pred             Cccc--cHHHHHhCCCEEEECCCC-----------------------HHHHHHHHHHHHHcC-C-CEEEEEecCCE
Confidence            4432  234556788888866321                       111234557777777 3 57888776633

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK10537 voltage-gated potassium channel; Provisional

Probab=96.49  E-value=0.024  Score=52.24  Aligned_cols=70  Identities=17%  Similarity=0.150  Sum_probs=54.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a   87 (348)
                      +.+++|.|. |-+|+.+++.|.++|++|++++.+..+..      ..++..++.+|.+|.+.+.++ +++++.|+-+.
T Consensus       240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~~~~------~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t  310 (393)
T PRK10537        240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGLEHR------LPDDADLIPGDSSDSAVLKKAGAARARAILALR  310 (393)
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchhhhh------ccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcC
Confidence            467999996 89999999999999999988886532111      113678999999999988875 56788888554

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.48  E-value=0.016  Score=52.43  Aligned_cols=38  Identities=21%  Similarity=0.290  Sum_probs=33.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      +.+|+|+||+|.+|..+++.+...|.+|+++++++.+.
T Consensus       152 g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~  189 (338)
T cd08295         152 GETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKV  189 (338)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            57999999999999999998888999999998876654

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.47  E-value=0.019  Score=51.60  Aligned_cols=72  Identities=28%  Similarity=0.311  Sum_probs=47.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCC-cchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQV-EGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~d~Vih~a~   88 (348)
                      ..+++|+||+|.+|..+++.+...|.+|+++++++.+.......    ....+ .+..+ .+.+.+. .++|+|+++++
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~-~~~d~v~~~~g  235 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKEL----GADYV-IDGSKFSEDVKKL-GGADVVIELVG  235 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHc----CCcEE-EecHHHHHHHHhc-cCCCEEEECCC
Confidence            56899999999999999999999999999999876543221111    11111 12221 1122222 26899999986

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08328 hypothetical protein; Provisional

Probab=96.45  E-value=0.034  Score=47.45  Aligned_cols=106  Identities=17%  Similarity=0.183  Sum_probs=63.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccc---------------------c--CCCCCeEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSK---------------------W--TRSDRLRLFQ   64 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~---------------------~--~~~~~~~~~~   64 (348)
                      +..+|+|.|+ |.+|+++++.|+..|. +++++|.+.-+. .+.+.                     .  +..-.++.+.
T Consensus        26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~  104 (231)
T PRK08328         26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFV  104 (231)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence            4678999996 9999999999999996 678887543211 11100                     0  0111233334


Q ss_pred             ccCCCcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeee
Q 035965           65 ADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTIT  142 (348)
Q Consensus        65 ~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~  142 (348)
                      ..++ .+.+.++++++|+||.+....                       ..-..+-++|++.+  ..+|+.++.+.++
T Consensus       105 ~~~~-~~~~~~~l~~~D~Vid~~d~~-----------------------~~r~~l~~~~~~~~--ip~i~g~~~g~~G  156 (231)
T PRK08328        105 GRLS-EENIDEVLKGVDVIVDCLDNF-----------------------ETRYLLDDYAHKKG--IPLVHGAVEGTYG  156 (231)
T ss_pred             ccCC-HHHHHHHHhcCCEEEECCCCH-----------------------HHHHHHHHHHHHcC--CCEEEEeeccCEE
Confidence            4443 344566677888888775321                       11123445677777  4588877766443

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.45  E-value=0.016  Score=53.35  Aligned_cols=103  Identities=18%  Similarity=0.147  Sum_probs=63.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCC-------------------cc-ccc-cccCCCCCe--EEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPG-------------------KL-QIF-SKWTRSDRL--RLFQA   65 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~-~~~-~~~~~~~~~--~~~~~   65 (348)
                      +.++|+|.|+ |.+|++++..|+..|. ++++++++.-                   |+ ... .+....+.+  +.+..
T Consensus       134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~  212 (376)
T PRK08762        134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE  212 (376)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence            4678999986 8999999999999997 7888887621                   11 000 000011333  33333


Q ss_pred             cCCCcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           66 DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        66 Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      .+.+ +.+.++++++|+||++....                       ..-..+-++|.+.+  ..+|+.+...
T Consensus       213 ~~~~-~~~~~~~~~~D~Vv~~~d~~-----------------------~~r~~ln~~~~~~~--ip~i~~~~~g  260 (376)
T PRK08762        213 RVTS-DNVEALLQDVDVVVDGADNF-----------------------PTRYLLNDACVKLG--KPLVYGAVFR  260 (376)
T ss_pred             cCCh-HHHHHHHhCCCEEEECCCCH-----------------------HHHHHHHHHHHHcC--CCEEEEEecc
Confidence            3333 45666778899999886421                       11123556777777  5578876654

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.44  E-value=0.02  Score=51.88  Aligned_cols=70  Identities=14%  Similarity=-0.001  Sum_probs=41.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHH-CCCe---EEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLE-RGYI---VHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      |++|.|.||||++|..|++.|++ ...+   +..+.............    +-.....++.+.+.    +.++|+||-+
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~----g~~~~v~~~~~~~~----~~~~Divf~a   72 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFG----GKEGTLQDAFDIDA----LKKLDIIITC   72 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccC----CCcceEEecCChhH----hcCCCEEEEC
Confidence            46899999999999999995555 4555   55544432211221111    11223334443332    3579999988


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      ++
T Consensus        73 ~~   74 (369)
T PRK06598         73 QG   74 (369)
T ss_pred             CC
Confidence            75

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.42  E-value=0.0079  Score=53.21  Aligned_cols=36  Identities=25%  Similarity=0.227  Sum_probs=32.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK   47 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~   47 (348)
                      .++|.|.|+ |.+|+.++..|+..|++|+++++++..
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~   38 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEA   38 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            468999996 999999999999999999999998653

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=96.41  E-value=0.0096  Score=41.43  Aligned_cols=33  Identities=33%  Similarity=0.413  Sum_probs=30.4

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      +|+|.|| |++|-.++..|.+.|.+|+++.|++.
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~   33 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDR   33 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccch
Confidence            5889997 99999999999999999999999774

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK06849 hypothetical protein; Provisional

Probab=96.40  E-value=0.013  Score=54.38  Aligned_cols=37  Identities=22%  Similarity=0.078  Sum_probs=33.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      ++|+|||||+...+|..+++.|.+.|++|++++..+.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~   39 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKY   39 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence            4689999999999999999999999999999998753

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.40  E-value=0.017  Score=51.98  Aligned_cols=73  Identities=19%  Similarity=0.243  Sum_probs=47.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHh---h--cCCCEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKA---V--MGCDGVFH   85 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~--~~~d~Vih   85 (348)
                      +.+|||+||+|-+|..+++.+...|.+|+++++++.+..+....    +++. ..|..+.+.+.+.   .  +++|+|++
T Consensus       139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~l----Ga~~-vi~~~~~~~~~~~~~~~~~~gvdvv~d  213 (325)
T TIGR02825       139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKL----GFDV-AFNYKTVKSLEETLKKASPDGYDCYFD  213 (325)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCCE-EEeccccccHHHHHHHhCCCCeEEEEE
Confidence            56899999999999999998888899999999876554222211    2221 1222222222221   1  25899999


Q ss_pred             ccc
Q 035965           86 VAA   88 (348)
Q Consensus        86 ~a~   88 (348)
                      +.+
T Consensus       214 ~~G  216 (325)
T TIGR02825       214 NVG  216 (325)
T ss_pred             CCC
Confidence            876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.37  E-value=0.013  Score=52.26  Aligned_cols=66  Identities=18%  Similarity=0.189  Sum_probs=52.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      |++|.|.|| |.+|+-++.+-...|++|++++-+++.. ...       .-+.+.++.+|++++.++.+.+|+|=
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~v-------a~~~i~~~~dD~~al~ela~~~DViT   67 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQV-------ADRVIVAAYDDPEALRELAAKCDVIT   67 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhc-------ccceeecCCCCHHHHHHHHhhCCEEE
Confidence            578999998 9999999999999999999999765432 111       12457788889999999999898873

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.36  E-value=0.016  Score=54.41  Aligned_cols=77  Identities=14%  Similarity=0.129  Sum_probs=54.2

Q ss_pred             CCCCCeEEEeCC----------------CChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcc
Q 035965            8 TGRSKTFCVTGA----------------NGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG   71 (348)
Q Consensus         8 ~~~~~~ilVtGa----------------tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   71 (348)
                      .+++++||||+|                ||-.|.+|++++..+|.+|+.+.-... ..      ...+++++..+  ...
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~------~p~~v~~i~V~--ta~  323 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA------DPQGVKVIHVE--SAR  323 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC------CCCCceEEEec--CHH
Confidence            467899999976                799999999999999999999874221 11      11356655443  344


Q ss_pred             hHHHhhc---CCCEEEEccccCccc
Q 035965           72 SFDKAVM---GCDGVFHVAASMEFD   93 (348)
Q Consensus        72 ~~~~~~~---~~d~Vih~a~~~~~~   93 (348)
                      ++.++++   ..|++|++|+...+.
T Consensus       324 eM~~av~~~~~~Di~I~aAAVaDyr  348 (475)
T PRK13982        324 QMLAAVEAALPADIAIFAAAVADWR  348 (475)
T ss_pred             HHHHHHHhhCCCCEEEEecccccee
Confidence            5544443   379999999975544

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.36  E-value=0.029  Score=46.61  Aligned_cols=75  Identities=19%  Similarity=0.255  Sum_probs=50.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcC---CCcc-cc-ccc--c-------------CCCC--CeEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRD---PGKL-QI-FSK--W-------------TRSD--RLRLFQAD   66 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~---~~~~-~~-~~~--~-------------~~~~--~~~~~~~D   66 (348)
                      +.++|+|.|+ |.+|+.++..|+..|. +++++|++   .+.. +. ...  .             ...+  +++.+..+
T Consensus        20 ~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~   98 (200)
T TIGR02354        20 EQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK   98 (200)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence            4678999997 8999999999999998 69999987   3222 10 000  0             0012  33444455


Q ss_pred             CCCcchHHHhhcCCCEEEEc
Q 035965           67 LQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        67 l~d~~~~~~~~~~~d~Vih~   86 (348)
                      ++. +.+.++++++|+||.+
T Consensus        99 i~~-~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        99 ITE-ENIDKFFKDADIVCEA  117 (200)
T ss_pred             CCH-hHHHHHhcCCCEEEEC
Confidence            543 4566777889999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.36  E-value=0.019  Score=46.68  Aligned_cols=73  Identities=15%  Similarity=0.169  Sum_probs=47.1

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cccc-------------------ccCCCC--CeEEEEccCCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFS-------------------KWTRSD--RLRLFQADLQV   69 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~-------------------~~~~~~--~~~~~~~Dl~d   69 (348)
                      +|+|.|+ |-+|+++++.|+..|. +++++|.+.-.. .+.+                   +....+  +++.+...+..
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            5899996 9999999999999997 599998764110 0000                   000112  33344444433


Q ss_pred             cchHHHhhcCCCEEEEcc
Q 035965           70 EGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        70 ~~~~~~~~~~~d~Vih~a   87 (348)
                       +.+.+.++++|+||.+.
T Consensus        80 -~~~~~~l~~~DlVi~~~   96 (174)
T cd01487          80 -NNLEGLFGDCDIVVEAF   96 (174)
T ss_pred             -hhHHHHhcCCCEEEECC
Confidence             45667788899999884

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.32  E-value=0.0037  Score=55.09  Aligned_cols=74  Identities=20%  Similarity=0.276  Sum_probs=49.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cccccc-CCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKW-TRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ...++|+|.|+ |..|++++..|.+.|. +|++++|+..+. .+.... ...+...+...     +++.+.+.++|+||+
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~~~~~aDiVIn  198 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAAALAAADGLVH  198 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHhhhCCCCEEEE
Confidence            34679999997 8899999999999996 799999987665 332211 01111222111     234445678999999


Q ss_pred             ccc
Q 035965           86 VAA   88 (348)
Q Consensus        86 ~a~   88 (348)
                      +..
T Consensus       199 aTp  201 (284)
T PRK12549        199 ATP  201 (284)
T ss_pred             CCc
Confidence            953

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.32  E-value=0.035  Score=47.33  Aligned_cols=36  Identities=28%  Similarity=0.330  Sum_probs=28.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEE-EEcCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHA-TVRDP   45 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~-~~r~~   45 (348)
                      +|+||+|.|++|=.|+.+++.+.+.. .++.+ ++|.+
T Consensus         1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~   38 (266)
T COG0289           1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG   38 (266)
T ss_pred             CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence            36789999999999999999998774 56554 44543

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.32  E-value=0.0083  Score=55.67  Aligned_cols=74  Identities=18%  Similarity=0.185  Sum_probs=53.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ..+++|+|.|+ |-+|+.++.+|...|. +++++.|+..++ .+....+   ..     .....+++...+..+|+||++
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~---~~-----~~~~~~~l~~~l~~aDiVI~a  249 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR---NA-----SAHYLSELPQLIKKADIIIAA  249 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc---CC-----eEecHHHHHHHhccCCEEEEC
Confidence            45689999997 9999999999999995 799999987665 3332211   11     122234567778889999999


Q ss_pred             cccCc
Q 035965           87 AASME   91 (348)
Q Consensus        87 a~~~~   91 (348)
                      .+...
T Consensus       250 T~a~~  254 (414)
T PRK13940        250 VNVLE  254 (414)
T ss_pred             cCCCC
Confidence            87643

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.31  E-value=0.0061  Score=53.96  Aligned_cols=36  Identities=19%  Similarity=0.313  Sum_probs=32.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      ++|.|.|+ |.+|+.++..|++.|++|++.++++...
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~   37 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQL   37 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence            58999997 9999999999999999999999987644

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.31  E-value=0.0076  Score=45.97  Aligned_cols=88  Identities=17%  Similarity=0.204  Sum_probs=44.3

Q ss_pred             CCCCCcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEE-cCCCcc-ccccc---------cCCCCCeEEEEccCCC
Q 035965            1 MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATV-RDPGKL-QIFSK---------WTRSDRLRLFQADLQV   69 (348)
Q Consensus         1 m~~~~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~-r~~~~~-~~~~~---------~~~~~~~~~~~~Dl~d   69 (348)
                      |+.|.. ....++|-|.|+ |-+|++|.+.|.+.||+|..+. |+.... .....         .......+.+..-+.|
T Consensus         1 ~~~~~~-~~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD   78 (127)
T PF10727_consen    1 MNTPAT-QAARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD   78 (127)
T ss_dssp             ------------EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C
T ss_pred             CCcccc-CCCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech
Confidence            555432 223468999997 9999999999999999998875 443221 11111         1112345566665555


Q ss_pred             cchHHHhhc---------CCCEEEEccccCc
Q 035965           70 EGSFDKAVM---------GCDGVFHVAASME   91 (348)
Q Consensus        70 ~~~~~~~~~---------~~d~Vih~a~~~~   91 (348)
                      . .+..+.+         .=.+|+|++|...
T Consensus        79 d-aI~~va~~La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   79 D-AIAEVAEQLAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             C-HHHHHHHHHHCC--S-TT-EEEES-SS--
T ss_pred             H-HHHHHHHHHHHhccCCCCcEEEECCCCCh
Confidence            3 3333221         1258999998653

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.31  E-value=0.028  Score=53.34  Aligned_cols=75  Identities=23%  Similarity=0.200  Sum_probs=52.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCc-------------c---h-
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVE-------------G---S-   72 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~-------------~---~-   72 (348)
                      +.+|+|+|+ |-+|...++.+...|.+|+++++++.+. ....+     +.+++..|..+.             +   . 
T Consensus       165 g~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aesl-----GA~~v~i~~~e~~~~~~gya~~~s~~~~~~~  238 (509)
T PRK09424        165 PAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESM-----GAEFLELDFEEEGGSGDGYAKVMSEEFIKAE  238 (509)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-----CCeEEEeccccccccccchhhhcchhHHHHH
Confidence            679999997 9999999999999999999999987655 22222     344443333221             1   1 


Q ss_pred             ---HHHhhcCCCEEEEccccCc
Q 035965           73 ---FDKAVMGCDGVFHVAASME   91 (348)
Q Consensus        73 ---~~~~~~~~d~Vih~a~~~~   91 (348)
                         +.+.++++|+||.+++...
T Consensus       239 ~~~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        239 MALFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHHHHhccCCCCEEEECCCCCc
Confidence               1222357999999998644

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.29  E-value=0.017  Score=56.85  Aligned_cols=72  Identities=17%  Similarity=0.289  Sum_probs=58.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a   87 (348)
                      .++|+|.|. |-+|+.+++.|.++|+++++++.++.+.+..+.    .+...+.+|.+|++.++++ +++++.||-+.
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~g~~v~~GDat~~~~L~~agi~~A~~vvv~~  472 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK----FGMKVFYGDATRMDLLESAGAAKAEVLINAI  472 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEe
Confidence            468999996 999999999999999999999998876522222    2678999999999988764 56788888664

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.29  E-value=0.013  Score=53.07  Aligned_cols=75  Identities=20%  Similarity=0.227  Sum_probs=49.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc----CCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM----GCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~Vi   84 (348)
                      .++.|||.||+|-+|++.++-+...| ..|+++... .+.++.+..    +. -...|..+++..+...+    ++|+|+
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~-e~~~l~k~l----GA-d~vvdy~~~~~~e~~kk~~~~~~DvVl  230 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSK-EKLELVKKL----GA-DEVVDYKDENVVELIKKYTGKGVDVVL  230 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEccc-chHHHHHHc----CC-cEeecCCCHHHHHHHHhhcCCCccEEE
Confidence            46799999999999999999888889 455544443 333222221    11 13466666544444433    599999


Q ss_pred             EccccC
Q 035965           85 HVAASM   90 (348)
Q Consensus        85 h~a~~~   90 (348)
                      +|++..
T Consensus       231 D~vg~~  236 (347)
T KOG1198|consen  231 DCVGGS  236 (347)
T ss_pred             ECCCCC
Confidence            999853

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.28  E-value=0.035  Score=52.44  Aligned_cols=77  Identities=19%  Similarity=0.096  Sum_probs=51.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ++.++|+|+|+ |-.|..+++.|.++|++|.+.+..+.......+.....++.++.+...+     ..+.++|.||...|
T Consensus         3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~~-----~~~~~~d~vv~spg   76 (445)
T PRK04308          3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLKD-----ALDNGFDILALSPG   76 (445)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCCH-----HHHhCCCEEEECCC
Confidence            34679999997 6899999999999999999998765432111111101256666554322     13357899999988


Q ss_pred             cCc
Q 035965           89 SME   91 (348)
Q Consensus        89 ~~~   91 (348)
                      ...
T Consensus        77 i~~   79 (445)
T PRK04308         77 ISE   79 (445)
T ss_pred             CCC
Confidence            753

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.26  E-value=0.024  Score=44.04  Aligned_cols=59  Identities=20%  Similarity=0.119  Sum_probs=48.5

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ....+++|+|.|.+.-+|..|+..|.++|.+|+.+.++..                         ++.+.++.+|+|+-+
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~-------------------------~l~~~v~~ADIVvsA   78 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI-------------------------QLQSKVHDADVVVVG   78 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc-------------------------CHHHHHhhCCEEEEe
Confidence            3467899999999999999999999999999988875431                         355677788999988


Q ss_pred             cccC
Q 035965           87 AASM   90 (348)
Q Consensus        87 a~~~   90 (348)
                      .+..
T Consensus        79 tg~~   82 (140)
T cd05212          79 SPKP   82 (140)
T ss_pred             cCCC
Confidence            8754

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.26  E-value=0.032  Score=50.26  Aligned_cols=94  Identities=17%  Similarity=0.151  Sum_probs=54.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHH-CCCe---EEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLE-RGYI---VHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      .++|.|.||||++|..|++.|.+ ...+   +..+....+.........  ..+.+...   |++.    +.++|+||-+
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~--~~l~v~~~---~~~~----~~~~Divf~a   75 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKG--REIIIQEA---KINS----FEGVDIAFFS   75 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCC--cceEEEeC---CHHH----hcCCCEEEEC
Confidence            46899999999999999999985 5666   444443322111111111  12222222   2222    3578999988


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      ++..                        .+..+...+.+.|  ..+|=.||..
T Consensus        76 ~~~~------------------------~s~~~~~~~~~~G--~~VID~Ss~f  102 (347)
T PRK06728         76 AGGE------------------------VSRQFVNQAVSSG--AIVIDNTSEY  102 (347)
T ss_pred             CChH------------------------HHHHHHHHHHHCC--CEEEECchhh
Confidence            7521                        1234555555566  5788788865

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.24  E-value=0.028  Score=47.79  Aligned_cols=35  Identities=29%  Similarity=0.420  Sum_probs=29.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRD   44 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~   44 (348)
                      ++..+|+|.|. |.+|+++++.|+..|. +++++|.+
T Consensus         9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            34678999996 9999999999999996 78888765

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.24  E-value=0.063  Score=48.94  Aligned_cols=104  Identities=14%  Similarity=0.059  Sum_probs=64.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccc--------------------cCCCCC--eEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSK--------------------WTRSDR--LRLFQ   64 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~--------------------~~~~~~--~~~~~   64 (348)
                      .+..+|+|.|+ |.+|+++++.|+..|. +++++|.+.-.. .+.+.                    ....+.  ++.+.
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            35679999997 9999999999999996 788888753111 11110                    001133  34444


Q ss_pred             ccCCCcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           65 ADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        65 ~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      ..++. +...++++++|+||.+....                       ..-..+-++|.+.+  ..+|+.++.+
T Consensus       105 ~~i~~-~~~~~~~~~~DvVvd~~d~~-----------------------~~r~~~n~~c~~~~--ip~v~~~~~g  153 (355)
T PRK05597        105 RRLTW-SNALDELRDADVILDGSDNF-----------------------DTRHLASWAAARLG--IPHVWASILG  153 (355)
T ss_pred             eecCH-HHHHHHHhCCCEEEECCCCH-----------------------HHHHHHHHHHHHcC--CCEEEEEEec
Confidence            44443 45566778999999886421                       11123556677777  4477776654

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.23  E-value=0.0073  Score=54.41  Aligned_cols=76  Identities=22%  Similarity=0.284  Sum_probs=47.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCC---CCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTR---SDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ||+|.|.|+ |-+|+.++..|++.|++|.+++|++... .+......   .++... ...+.-..+..++++++|+||-+
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~vi~~   78 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKL-PDNLRATTDLAEALADADLILVA   78 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCCCEEEEe
Confidence            468999996 9999999999999999999999976543 22221000   000000 00111122445566789999987


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      ..
T Consensus        79 v~   80 (325)
T PRK00094         79 VP   80 (325)
T ss_pred             CC
Confidence            64

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.23  E-value=0.018  Score=50.74  Aligned_cols=80  Identities=16%  Similarity=0.109  Sum_probs=49.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCC---cc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPG---KL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~---~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      ...++++|.|+ |..+++++..|...|. +|++++|+..   +. .+...............++.+.+.+.+.+.++|+|
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv  200 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL  200 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence            35679999997 7779999999999885 8999999853   33 22211111001111122232323344556689999


Q ss_pred             EEcccc
Q 035965           84 FHVAAS   89 (348)
Q Consensus        84 ih~a~~   89 (348)
                      ||+-..
T Consensus       201 INaTp~  206 (288)
T PRK12749        201 TNGTKV  206 (288)
T ss_pred             EECCCC
Confidence            998654

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.22  E-value=0.017  Score=51.66  Aligned_cols=53  Identities=26%  Similarity=0.282  Sum_probs=43.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      .|+|.|.|+ |-+|+.+++.|.+.||+|++.+|+..                        .++.++++++|+||-+..
T Consensus         4 ~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~------------------------~~~~~~~~~advvi~~vp   56 (308)
T PRK14619          4 PKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG------------------------LSLAAVLADADVIVSAVS   56 (308)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC------------------------CCHHHHHhcCCEEEEECC
Confidence            468999985 99999999999999999999998652                        134566678898887754

>PRK07877 hypothetical protein; Provisional

Probab=96.20  E-value=0.026  Score=55.90  Aligned_cols=76  Identities=20%  Similarity=0.177  Sum_probs=52.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-cccccc---------------------CCCCCeEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-QIFSKW---------------------TRSDRLRLFQA   65 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-~~~~~~---------------------~~~~~~~~~~~   65 (348)
                      +..+|+|.|+ | +|++++.+|+..|.  +++++|.+.=.. ++.+..                     +..-+++.+..
T Consensus       106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~  183 (722)
T PRK07877        106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD  183 (722)
T ss_pred             hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence            4679999999 8 99999999999984  788888653211 111110                     01124555555


Q ss_pred             cCCCcchHHHhhcCCCEEEEccc
Q 035965           66 DLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        66 Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      .++ .+.+.++++++|+||.+.-
T Consensus       184 ~i~-~~n~~~~l~~~DlVvD~~D  205 (722)
T PRK07877        184 GLT-EDNVDAFLDGLDVVVEECD  205 (722)
T ss_pred             cCC-HHHHHHHhcCCCEEEECCC
Confidence            555 5678888889999998853

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.20  E-value=0.018  Score=50.64  Aligned_cols=56  Identities=14%  Similarity=0.125  Sum_probs=46.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEE-cCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATV-RDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ...+++|+|.|.+|.+|..++..|+++|++|+++. |+.                          ++.++++.+|+||-+
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~--------------------------~l~e~~~~ADIVIsa  208 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR--------------------------DLPAVCRRADILVAA  208 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC--------------------------CHHHHHhcCCEEEEe
Confidence            45789999999999999999999999999999985 432                          145666788999988


Q ss_pred             ccc
Q 035965           87 AAS   89 (348)
Q Consensus        87 a~~   89 (348)
                      .+.
T Consensus       209 vg~  211 (296)
T PRK14188        209 VGR  211 (296)
T ss_pred             cCC
Confidence            774

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.17  E-value=0.0091  Score=55.70  Aligned_cols=71  Identities=17%  Similarity=0.183  Sum_probs=51.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ..+++|+|.|+ |-+|..+++.|...| .+|++++|+..+. .+....    +...+     +.+++.+.+.++|+||.+
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~----g~~~i-----~~~~l~~~l~~aDvVi~a  247 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL----GGEAV-----KFEDLEEYLAEADIVISS  247 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----CCeEe-----eHHHHHHHHhhCCEEEEC
Confidence            44689999997 999999999999999 7899999987654 232211    11112     223566777889999998


Q ss_pred             ccc
Q 035965           87 AAS   89 (348)
Q Consensus        87 a~~   89 (348)
                      .+.
T Consensus       248 T~s  250 (417)
T TIGR01035       248 TGA  250 (417)
T ss_pred             CCC
Confidence            654

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.17  E-value=0.007  Score=54.06  Aligned_cols=74  Identities=16%  Similarity=0.184  Sum_probs=59.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcc-hHHHhhcCCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEG-SFDKAVMGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~d~Vih~   86 (348)
                      ++++||+.|+ ||+...+++.|.+++ .+|++.+|...++ .+..-    .+++.+..|+.+.+ .+++.++..|.|+-+
T Consensus         1 ~~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~----~~~~av~ldv~~~~~~L~~~v~~~D~viSL   75 (445)
T KOG0172|consen    1 TKKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKG----INIKAVSLDVADEELALRKEVKPLDLVISL   75 (445)
T ss_pred             CCcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhcC----CCccceEEEccchHHHHHhhhcccceeeee
Confidence            3678999995 999999999999875 5888888877665 44332    35888999999988 888888888988866


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      --
T Consensus        76 lP   77 (445)
T KOG0172|consen   76 LP   77 (445)
T ss_pred             cc
Confidence            54

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.17  E-value=0.018  Score=53.06  Aligned_cols=35  Identities=20%  Similarity=0.232  Sum_probs=29.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      |+|.|.| .|++|..++..|. .||+|+++++++.+.
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv   35 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRV   35 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHH
Confidence            3799998 5999999996665 599999999987765

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.17  E-value=0.019  Score=52.93  Aligned_cols=69  Identities=13%  Similarity=0.072  Sum_probs=53.1

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEccc
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAA   88 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~   88 (348)
                      ||+|.|+ |.+|..+++.+.+.|++|++++.++...... .     --.++.+|..|.+.+.++++  ++|.|+-...
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~-~-----ad~~~~~~~~d~~~l~~~~~~~~id~v~~~~e   71 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ-V-----AHRSYVINMLDGDALRAVIEREKPDYIVPEIE   71 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhh-h-----CceEEEcCCCCHHHHHHHHHHhCCCEEEeccC
Confidence            6899996 9999999999999999999999876433111 0     11456678889888888776  6999986543

This enzyme is an alternative to PurN (TIGR00639)

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.16  E-value=0.085  Score=45.43  Aligned_cols=77  Identities=17%  Similarity=0.189  Sum_probs=49.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cccc--------------------ccCCCC--CeEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFS--------------------KWTRSD--RLRLFQA   65 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~--------------------~~~~~~--~~~~~~~   65 (348)
                      +.++|+|.|+ |-+|+++++.|+..|. +++++|.+.-.. .+.+                    +....+  +++.+..
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~  109 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINA  109 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEec
Confidence            4679999997 9999999999999995 777777642111 1100                    000112  3344444


Q ss_pred             cCCCcchHHHhhcCCCEEEEccc
Q 035965           66 DLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        66 Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      .++ .+.+.++++++|+||.+..
T Consensus       110 ~i~-~~~~~~~~~~~DiVi~~~D  131 (245)
T PRK05690        110 RLD-DDELAALIAGHDLVLDCTD  131 (245)
T ss_pred             cCC-HHHHHHHHhcCCEEEecCC
Confidence            444 3456667888999998853

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.15  E-value=0.023  Score=49.53  Aligned_cols=58  Identities=19%  Similarity=0.142  Sum_probs=48.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++|+|.|.+..+|..|+..|+++|..|+++.++..                         ++.+.++.+|+||.++
T Consensus       156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~-------------------------~l~~~~~~ADIvi~av  210 (285)
T PRK10792        156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK-------------------------NLRHHVRNADLLVVAV  210 (285)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC-------------------------CHHHHHhhCCEEEEcC
Confidence            456899999999999999999999999999998876431                         3666778899999998


Q ss_pred             ccC
Q 035965           88 ASM   90 (348)
Q Consensus        88 ~~~   90 (348)
                      |..
T Consensus       211 G~p  213 (285)
T PRK10792        211 GKP  213 (285)
T ss_pred             CCc
Confidence            753

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.14  E-value=0.01  Score=55.55  Aligned_cols=71  Identities=20%  Similarity=0.246  Sum_probs=51.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ..+++|+|+|+ |-+|..+++.|...|. +|++++|++.+. .+....    +.     +..+.+++.+.+.++|+||.+
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~----g~-----~~~~~~~~~~~l~~aDvVI~a  249 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF----GG-----EAIPLDELPEALAEADIVISS  249 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc----CC-----cEeeHHHHHHHhccCCEEEEC
Confidence            45689999996 9999999999999997 799999987654 233221    11     122234566677789999998


Q ss_pred             ccc
Q 035965           87 AAS   89 (348)
Q Consensus        87 a~~   89 (348)
                      .+.
T Consensus       250 T~s  252 (423)
T PRK00045        250 TGA  252 (423)
T ss_pred             CCC
Confidence            764

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.13  E-value=0.0096  Score=53.27  Aligned_cols=70  Identities=17%  Similarity=0.185  Sum_probs=50.7

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ..++|+|.|+ |-+|..+++.|...| .+|++++|++.+. .+....    +...+     +.+++.+.+.++|+||.+.
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~----g~~~~-----~~~~~~~~l~~aDvVi~at  246 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL----GGNAV-----PLDELLELLNEADVVISAT  246 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc----CCeEE-----eHHHHHHHHhcCCEEEECC
Confidence            4689999997 999999999999866 6899999987654 333221    11222     2235666777899999997


Q ss_pred             cc
Q 035965           88 AS   89 (348)
Q Consensus        88 ~~   89 (348)
                      +.
T Consensus       247 ~~  248 (311)
T cd05213         247 GA  248 (311)
T ss_pred             CC
Confidence            74

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.10  E-value=0.022  Score=54.48  Aligned_cols=76  Identities=21%  Similarity=0.160  Sum_probs=48.2

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-------cCCCCCeEEE-EccCCCcchHHHhhcCCCE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-------WTRSDRLRLF-QADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-------~~~~~~~~~~-~~Dl~d~~~~~~~~~~~d~   82 (348)
                      |+|.|.|+ |.+|+.++..|+..|++|++.++++.+. .+...       .......... .+.+.-.+++.++++++|+
T Consensus         5 ~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~   83 (495)
T PRK07531          5 MKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW   83 (495)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence            58999985 9999999999999999999999987654 21110       0000000000 0111112356677889999


Q ss_pred             EEEccc
Q 035965           83 VFHVAA   88 (348)
Q Consensus        83 Vih~a~   88 (348)
                      |+-+..
T Consensus        84 Vieavp   89 (495)
T PRK07531         84 IQESVP   89 (495)
T ss_pred             EEEcCc
Confidence            997653

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.10  E-value=0.027  Score=47.28  Aligned_cols=102  Identities=23%  Similarity=0.391  Sum_probs=64.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-----cccccc----------------CCCCCeEEEE-cc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-----QIFSKW----------------TRSDRLRLFQ-AD   66 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-----~~~~~~----------------~~~~~~~~~~-~D   66 (348)
                      +..+|+|.|. |.+|++.+++|.+.|. ++++++-+.-..     +...+.                .-.|..++.. -|
T Consensus        29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~  107 (263)
T COG1179          29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND  107 (263)
T ss_pred             hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence            3568999997 9999999999999986 667766532111     111000                0123444443 33


Q ss_pred             CCCcchHHHhhc-CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           67 LQVEGSFDKAVM-GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        67 l~d~~~~~~~~~-~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      .-.++.+.+++. ++|+||.+.-.                       +..=..|+..|.+++    +-++||++
T Consensus       108 f~t~en~~~~~~~~~DyvIDaiD~-----------------------v~~Kv~Li~~c~~~k----i~vIss~G  154 (263)
T COG1179         108 FITEENLEDLLSKGFDYVIDAIDS-----------------------VRAKVALIAYCRRNK----IPVISSMG  154 (263)
T ss_pred             hhCHhHHHHHhcCCCCEEEEchhh-----------------------hHHHHHHHHHHHHcC----CCEEeecc
Confidence            445667777654 69999988532                       222347899998777    35677766

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.10  E-value=0.014  Score=47.60  Aligned_cols=70  Identities=23%  Similarity=0.116  Sum_probs=48.5

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccc-cccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ-IFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ....+++|.|.|. |-||+.+++.|..-|.+|++++|...... ....     .+        ...++.++++.+|+|+.
T Consensus        32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~-----~~--------~~~~l~ell~~aDiv~~   97 (178)
T PF02826_consen   32 RELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEF-----GV--------EYVSLDELLAQADIVSL   97 (178)
T ss_dssp             S-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHT-----TE--------EESSHHHHHHH-SEEEE
T ss_pred             cccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccc-----cc--------eeeehhhhcchhhhhhh
Confidence            3456899999995 99999999999999999999999875431 1110     11        12356777888999887


Q ss_pred             ccccC
Q 035965           86 VAASM   90 (348)
Q Consensus        86 ~a~~~   90 (348)
                      +....
T Consensus        98 ~~plt  102 (178)
T PF02826_consen   98 HLPLT  102 (178)
T ss_dssp             -SSSS
T ss_pred             hhccc
Confidence            76643

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.09  E-value=0.11  Score=46.28  Aligned_cols=101  Identities=20%  Similarity=0.300  Sum_probs=62.2

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cccccc----------------------CCCCCeEEEEccCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKW----------------------TRSDRLRLFQADLQ   68 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~----------------------~~~~~~~~~~~Dl~   68 (348)
                      +|||.|+ |.+|.++++.|+..|. +++++|.+.-.. .+.+..                      +..-.++.+..++.
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            5899996 9999999999999996 678877653221 111110                      01123455566666


Q ss_pred             CcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           69 VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        69 d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      +.....+.++++|+||.+...                       ...-..+-+.|.+.+  ..+|..++.+
T Consensus        80 ~~~~~~~f~~~~DvVv~a~Dn-----------------------~~ar~~in~~c~~~~--ip~I~~gt~G  125 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNALDN-----------------------LAARRHVNKMCLAAD--VPLIESGTTG  125 (312)
T ss_pred             CccchHHHHhcCCEEEECCCC-----------------------HHHHHHHHHHHHHCC--CCEEEEecCc
Confidence            643344667788988877431                       122234556666666  4577777665

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.08  E-value=0.011  Score=52.20  Aligned_cols=77  Identities=16%  Similarity=0.035  Sum_probs=50.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ...++++|.|+ |..|+.++.+|.+.|. +|+++.|+..+. .+......  ......  +...+++...+.++|+||++
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~--~~~~~~--~~~~~~~~~~~~~~DiVIna  197 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ--VGVITR--LEGDSGGLAIEKAAEVLVST  197 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh--cCccee--ccchhhhhhcccCCCEEEEC
Confidence            35678999996 9999999999999996 799999987665 33322110  011111  11112334455679999999


Q ss_pred             cccC
Q 035965           87 AASM   90 (348)
Q Consensus        87 a~~~   90 (348)
                      ....
T Consensus       198 Tp~g  201 (282)
T TIGR01809       198 VPAD  201 (282)
T ss_pred             CCCC
Confidence            7653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.08  E-value=0.023  Score=51.82  Aligned_cols=57  Identities=18%  Similarity=0.172  Sum_probs=43.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      .++|.|.|.+|.||+.+++.|.+. |++|+++++....                      .....+.++++|+||-+...
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~----------------------~~~~~~~v~~aDlVilavPv   61 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG----------------------SLDPATLLQRADVLIFSAPI   61 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc----------------------cCCHHHHhcCCCEEEEeCCH
Confidence            578999999999999999999875 8899998874210                      01234556778888877643

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.06  E-value=0.012  Score=52.26  Aligned_cols=65  Identities=18%  Similarity=0.347  Sum_probs=47.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      +|+|.|.| .|.+|+.+++.|.+.|++|++.+|++.+. .+...     ++.       -..++.++++++|+||-+..
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-----g~~-------~~~~~~e~~~~~d~vi~~vp   67 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-----GAE-------TASTAKAVAEQCDVIITMLP   67 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-----CCe-------ecCCHHHHHhcCCEEEEeCC
Confidence            46899999 59999999999999999999999877544 22211     111       11245566778999998764

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.06  E-value=0.028  Score=53.64  Aligned_cols=74  Identities=15%  Similarity=-0.008  Sum_probs=50.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ..+++|+|.|+ |.+|..+++.|.++|++|+++++++...  ...... ...+++++.++-..      ...++|.||..
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l-~~~gv~~~~~~~~~------~~~~~D~Vv~s   85 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAIL-EALGATVRLGPGPT------LPEDTDLVVTS   85 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHH-HHcCCEEEECCCcc------ccCCCCEEEEC
Confidence            45679999997 9999999999999999999999765322  111100 11256666554322      23468999988


Q ss_pred             cccC
Q 035965           87 AASM   90 (348)
Q Consensus        87 a~~~   90 (348)
                      .|..
T Consensus        86 ~Gi~   89 (480)
T PRK01438         86 PGWR   89 (480)
T ss_pred             CCcC
Confidence            8864

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=96.04  E-value=0.54  Score=37.02  Aligned_cols=36  Identities=22%  Similarity=0.237  Sum_probs=32.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      ..+|+|.||-|-+|+++++++.+++|-|.-++....
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eN   38 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSEN   38 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccc
Confidence            458999999999999999999999999988887654

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.04  E-value=0.049  Score=44.51  Aligned_cols=81  Identities=16%  Similarity=0.117  Sum_probs=53.8

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCC-cchHHHhhcCCCEEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQV-EGSFDKAVMGCDGVFH   85 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~d~Vih   85 (348)
                      ....+|+|+|.|.+.-+|.-|+..|+++|..|+.++.+.-..  ....   .+...-.....| ...+.+.++.+|+||-
T Consensus        58 ~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~~~~---~~~~hs~t~~~~~~~~l~~~~~~ADIVIs  132 (197)
T cd01079          58 NRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--FTRG---ESIRHEKHHVTDEEAMTLDCLSQSDVVIT  132 (197)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--cccc---cccccccccccchhhHHHHHhhhCCEEEE
Confidence            467799999999999999999999999999999997543210  0000   000011111112 1236677889999999


Q ss_pred             ccccCcc
Q 035965           86 VAASMEF   92 (348)
Q Consensus        86 ~a~~~~~   92 (348)
                      ++|....
T Consensus       133 AvG~~~~  139 (197)
T cd01079         133 GVPSPNY  139 (197)
T ss_pred             ccCCCCC
Confidence            9886543

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.03  E-value=0.026  Score=49.30  Aligned_cols=57  Identities=18%  Similarity=0.159  Sum_probs=47.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++|+|.|.++.+|+.|+..|.++|..|+++....                         .++.+.++.+|+||-++
T Consensus       155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t-------------------------~~l~~~~~~ADIVV~av  209 (285)
T PRK14189        155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT-------------------------RDLAAHTRQADIVVAAV  209 (285)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC-------------------------CCHHHHhhhCCEEEEcC
Confidence            35689999999999999999999999999998876432                         13566778899999888


Q ss_pred             cc
Q 035965           88 AS   89 (348)
Q Consensus        88 ~~   89 (348)
                      +.
T Consensus       210 G~  211 (285)
T PRK14189        210 GK  211 (285)
T ss_pred             CC
Confidence            84

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.02  E-value=0.034  Score=44.31  Aligned_cols=35  Identities=20%  Similarity=0.231  Sum_probs=31.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVR   43 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r   43 (348)
                      .+.+++|+|.|| |-+|...++.|++.|++|++++.
T Consensus        10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719         10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            346789999998 99999999999999999998853

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.01  E-value=0.022  Score=52.77  Aligned_cols=66  Identities=24%  Similarity=0.181  Sum_probs=48.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ..+++|+|+|. |.||+.+++.|...|.+|+++++++.+. ....     .++++.        .+.++++++|+||.+.
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-----~G~~v~--------~l~eal~~aDVVI~aT  275 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-----DGFRVM--------TMEEAAELGDIFVTAT  275 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-----cCCEec--------CHHHHHhCCCEEEECC
Confidence            46789999996 9999999999999999999999987654 1111     122211        2456677899999876


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      +
T Consensus       276 G  276 (425)
T PRK05476        276 G  276 (425)
T ss_pred             C
Confidence            4

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=95.99  E-value=0.0041  Score=51.54  Aligned_cols=80  Identities=15%  Similarity=0.146  Sum_probs=54.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCC--eEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDR--LRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      +++.++||+||+|..+|+.+...||+|.-++|+.....-..+ .....  ++....+..|+.....+++++.-++|..+.
T Consensus         3 ~k~~vfgg~gflg~~ic~~a~~sgy~vvsvsrsgas~~snki-d~~~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgi   81 (283)
T KOG4288|consen    3 PKLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSGASPHSNKI-DDKQDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGI   81 (283)
T ss_pred             ccceeecccccchhhhhHHHHhcCceEEEeccccCCCcCCCC-cchhhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeE
Confidence            578899999999999999999999999999886543200000 00012  233445556677777777777777777776


Q ss_pred             Ccc
Q 035965           90 MEF   92 (348)
Q Consensus        90 ~~~   92 (348)
                      ...
T Consensus        82 lse   84 (283)
T KOG4288|consen   82 LSE   84 (283)
T ss_pred             eec
Confidence            543

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.99  E-value=0.016  Score=45.97  Aligned_cols=69  Identities=22%  Similarity=0.250  Sum_probs=45.9

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ..+.+|+++|+|- |.+|+-++++|...|.+|+++..+|-+. +...     ++++..        .+.+++..+|++|-
T Consensus        19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-----dGf~v~--------~~~~a~~~adi~vt   84 (162)
T PF00670_consen   19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAM-----DGFEVM--------TLEEALRDADIFVT   84 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-----TT-EEE---------HHHHTTT-SEEEE
T ss_pred             eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhh-----cCcEec--------CHHHHHhhCCEEEE
Confidence            3456789999995 9999999999999999999999988654 2221     344432        36677888999988


Q ss_pred             cccc
Q 035965           86 VAAS   89 (348)
Q Consensus        86 ~a~~   89 (348)
                      +-|.
T Consensus        85 aTG~   88 (162)
T PF00670_consen   85 ATGN   88 (162)
T ss_dssp             -SSS
T ss_pred             CCCC
Confidence            7664

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.96  E-value=0.11  Score=46.42  Aligned_cols=67  Identities=13%  Similarity=0.191  Sum_probs=50.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++|.|.| .|-||+.+++.|..-|++|++.++.....         +++...    ....++.++++++|+|+.+.
T Consensus       133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~---------~~~~~~----~~~~~l~e~l~~aDvvv~~l  198 (312)
T PRK15469        133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW---------PGVQSF----AGREELSAFLSQTRVLINLL  198 (312)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC---------CCceee----cccccHHHHHhcCCEEEECC
Confidence            45678999999 59999999999999999999999865321         111111    12346888899999998776


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      .
T Consensus       199 P  199 (312)
T PRK15469        199 P  199 (312)
T ss_pred             C
Confidence            5

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.94  E-value=0.12  Score=47.43  Aligned_cols=77  Identities=17%  Similarity=0.217  Sum_probs=50.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccc--c------------------CCCCC--eEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSK--W------------------TRSDR--LRLFQA   65 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~--~------------------~~~~~--~~~~~~   65 (348)
                      +..+|+|.|+ |.+|+++++.|+..|. ++++++.+.-+. .+.+.  .                  ...+.  ++.+..
T Consensus        40 ~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~  118 (370)
T PRK05600         40 HNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRE  118 (370)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeee
Confidence            4578999996 9999999999999995 888888753111 11110  0                  01133  344444


Q ss_pred             cCCCcchHHHhhcCCCEEEEccc
Q 035965           66 DLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        66 Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      .++ .+...++++++|+||.+..
T Consensus       119 ~i~-~~~~~~~~~~~DlVid~~D  140 (370)
T PRK05600        119 RLT-AENAVELLNGVDLVLDGSD  140 (370)
T ss_pred             ecC-HHHHHHHHhCCCEEEECCC
Confidence            444 3456677888999998854

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.92  E-value=0.013  Score=42.38  Aligned_cols=65  Identities=23%  Similarity=0.317  Sum_probs=44.1

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCC---CeEEEE-EcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           13 TFCVTGANGYIGSWLVKTLLERG---YIVHAT-VRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g---~~V~~~-~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ||.|.| +|-+|+.|++.|++.|   ++|... +|++.+. .+....    .+.+...      +..++++.+|+||-+.
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~----~~~~~~~------~~~~~~~~advvilav   69 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY----GVQATAD------DNEEAAQEADVVILAV   69 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC----TTEEESE------EHHHHHHHTSEEEE-S
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh----ccccccC------ChHHhhccCCEEEEEE
Confidence            578886 5999999999999999   999955 8887655 433322    1222221      3455666889999886


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      -
T Consensus        70 ~   70 (96)
T PF03807_consen   70 K   70 (96)
T ss_dssp             -
T ss_pred             C
Confidence            4

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.92  E-value=0.041  Score=45.82  Aligned_cols=72  Identities=14%  Similarity=0.161  Sum_probs=47.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++|+|.|| |-+|...++.|++.|++|+++.+...+. +.... ....+.+..-++.     ...+.++|+||-+.
T Consensus         7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~-l~~l~-~~~~i~~~~~~~~-----~~~l~~adlViaaT   78 (202)
T PRK06718          7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTEN-LVKLV-EEGKIRWKQKEFE-----PSDIVDAFLVIAAT   78 (202)
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHH-HHHHH-hCCCEEEEecCCC-----hhhcCCceEEEEcC
Confidence            456789999998 9999999999999999999998654322 11111 0123555433322     22356788887653

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.91  E-value=0.032  Score=50.36  Aligned_cols=67  Identities=15%  Similarity=-0.004  Sum_probs=49.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++|.|.|- |-||+.+++.|...|.+|++++|.........     .++        ...++.++++.+|+|+-+.
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-----~~~--------~~~~l~ell~~aDiV~l~l  212 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAEKE-----LGA--------EYRPLEELLRESDFVSLHV  212 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhHHH-----cCC--------EecCHHHHHhhCCEEEEeC
Confidence            457899999996 99999999999999999999998654221000     011        1235677888899988776


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      .
T Consensus       213 P  213 (333)
T PRK13243        213 P  213 (333)
T ss_pred             C
Confidence            4

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=95.91  E-value=0.072  Score=47.10  Aligned_cols=81  Identities=12%  Similarity=0.096  Sum_probs=51.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      -||.|.||+||.|..|++.|...- .++..+.-+..                  .+   +.+..++++++|+||-+....
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~------------------~~---~~~~~~~~~~~D~vFlalp~~   60 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR------------------KD---AAERAKLLNAADVAILCLPDD   60 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc------------------cC---cCCHhHhhcCCCEEEECCCHH
Confidence            379999999999999999998763 35544432211                  11   112345556899999776421


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                                              .+..++..+.+.+  .++|=.|+..
T Consensus        61 ------------------------~s~~~~~~~~~~g--~~VIDlSadf   83 (310)
T TIGR01851        61 ------------------------AAREAVSLVDNPN--TCIIDASTAY   83 (310)
T ss_pred             ------------------------HHHHHHHHHHhCC--CEEEECChHH
Confidence                                    0223444454455  5788888864

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.87  E-value=0.012  Score=47.03  Aligned_cols=74  Identities=20%  Similarity=0.268  Sum_probs=46.5

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC---CCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT---RSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ||.|.|| |-.|.+++..|..+|++|....|++... .+.....   ..++...-. .+.-..++.++++++|+|+-+..
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~ad~IiiavP   78 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPE-NIKATTDLEEALEDADIIIIAVP   78 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-SEEEE-S-
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCcccEEEeccc
Confidence            6899997 9999999999999999999999986432 2221110   011111111 11112356778899999997654

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=95.86  E-value=0.034  Score=54.09  Aligned_cols=69  Identities=14%  Similarity=0.091  Sum_probs=53.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      +++|+|+|.|| |.+|+-+++++.+.|++|++++.++...... .     --..+.+|..|.+.+.++.+++|+|.
T Consensus        20 ~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~~-~-----AD~~~v~~~~D~~~l~~~a~~~dvIt   88 (577)
T PLN02948         20 VSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPASS-V-----AARHVVGSFDDRAAVREFAKRCDVLT   88 (577)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhh-h-----CceeeeCCCCCHHHHHHHHHHCCEEE
Confidence            45789999997 8999999999999999999999876422100 0     11345688899888888888888874

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.84  E-value=0.017  Score=50.54  Aligned_cols=66  Identities=20%  Similarity=0.227  Sum_probs=45.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC---CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG---YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g---~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      |||+|.|.|+ |-+|+.+++.|.+.|   ++|.+++|++.+. .+....    ++.     +.  .+..++++++|+||-
T Consensus         1 ~mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~----g~~-----~~--~~~~~~~~~advVil   68 (267)
T PRK11880          1 MMKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEY----GVR-----AA--TDNQEAAQEADVVVL   68 (267)
T ss_pred             CCCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc----CCe-----ec--CChHHHHhcCCEEEE
Confidence            3678999996 999999999999998   7899999976543 222111    111     11  123445567899987


Q ss_pred             cc
Q 035965           86 VA   87 (348)
Q Consensus        86 ~a   87 (348)
                      +.
T Consensus        69 ~v   70 (267)
T PRK11880         69 AV   70 (267)
T ss_pred             Ec
Confidence            64

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=95.84  E-value=1.4  Score=41.62  Aligned_cols=89  Identities=21%  Similarity=0.268  Sum_probs=59.8

Q ss_pred             CCCCeEEEeCCC---ChhHHHHHHHHHHCCC--eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965            9 GRSKTFCVTGAN---GYIGSWLVKTLLERGY--IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus         9 ~~~~~ilVtGat---GfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      ...++|+|.|+|   |-+|..+.+.|.+.||  +|+.+..+....         .+       +.-..++.++-+.+|.+
T Consensus         5 ~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i---------~G-------~~~~~sl~~lp~~~Dla   68 (447)
T TIGR02717         5 FNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEI---------LG-------VKAYPSVLEIPDPVDLA   68 (447)
T ss_pred             cCCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCcc---------CC-------ccccCCHHHCCCCCCEE
Confidence            356899999998   7789999999999998  576666443210         01       11122344444567887


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSV  138 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~  138 (348)
                      +-+...                        ..+..+++.|.+.| ++.+|.+|+-
T Consensus        69 vi~vp~------------------------~~~~~~l~e~~~~g-v~~~vi~s~g   98 (447)
T TIGR02717        69 VIVVPA------------------------KYVPQVVEECGEKG-VKGAVVITAG   98 (447)
T ss_pred             EEecCH------------------------HHHHHHHHHHHhcC-CCEEEEECCC
Confidence            765431                        12456888888888 8888888874

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.84  E-value=0.03  Score=48.89  Aligned_cols=58  Identities=16%  Similarity=0.134  Sum_probs=46.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++|+|.|.+|.+|..++..|+++|+.|+++. +..                        .++.+..+.+|+||-+.
T Consensus       155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~-s~t------------------------~~l~~~~~~ADIVI~av  209 (284)
T PRK14179        155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH-SRT------------------------RNLAEVARKADILVVAI  209 (284)
T ss_pred             CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC-CCC------------------------CCHHHHHhhCCEEEEec
Confidence            35689999999999999999999999999998872 111                        13566777899999888


Q ss_pred             ccC
Q 035965           88 ASM   90 (348)
Q Consensus        88 ~~~   90 (348)
                      +..
T Consensus       210 g~~  212 (284)
T PRK14179        210 GRG  212 (284)
T ss_pred             Ccc
Confidence            753

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.84  E-value=0.037  Score=48.30  Aligned_cols=58  Identities=16%  Similarity=0.149  Sum_probs=47.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++++|.|.+..+|..|+..|.++|..|+++.....                         ++.+..+++|+||.++
T Consensus       161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~-------------------------~l~~~~~~ADIvv~Av  215 (287)
T PRK14176        161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD-------------------------DLKKYTLDADILVVAT  215 (287)
T ss_pred             CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC-------------------------CHHHHHhhCCEEEEcc
Confidence            356899999999999999999999999999988875321                         3566677899999988


Q ss_pred             ccC
Q 035965           88 ASM   90 (348)
Q Consensus        88 ~~~   90 (348)
                      |..
T Consensus       216 G~p  218 (287)
T PRK14176        216 GVK  218 (287)
T ss_pred             CCc
Confidence            853

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=95.82  E-value=0.026  Score=49.43  Aligned_cols=68  Identities=22%  Similarity=0.287  Sum_probs=45.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCc---chHHHhhcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVE---GSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~d~Vih~a   87 (348)
                      +++|+|.| .|.||+.+++.|.++|+.|.+++++........         -...++.|.   +........+|+||-+.
T Consensus         3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~---------a~~lgv~d~~~~~~~~~~~~~aD~Vivav   72 (279)
T COG0287           3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLKA---------ALELGVIDELTVAGLAEAAAEADLVIVAV   72 (279)
T ss_pred             CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHHH---------HhhcCcccccccchhhhhcccCCEEEEec
Confidence            56777777 799999999999999999988888776431111         122333332   11244555789998775


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      -
T Consensus        73 P   73 (279)
T COG0287          73 P   73 (279)
T ss_pred             c
Confidence            4

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.81  E-value=0.015  Score=52.50  Aligned_cols=76  Identities=21%  Similarity=0.194  Sum_probs=47.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC---CCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT---RSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      +|+|.|.|+ |-+|+.++..|++.|++|++.+|++.+. .+.....   ..++... ...+.-..+..++++++|+||-+
T Consensus         4 ~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~-~~~~~~~~~~~e~~~~aD~Vi~~   81 (328)
T PRK14618          4 GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVAL-PAELYPTADPEEALAGADFAVVA   81 (328)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcC-CCCeEEeCCHHHHHcCCCEEEEE
Confidence            458999986 9999999999999999999999976543 2221100   0001000 00011122455566789999877


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      ..
T Consensus        82 v~   83 (328)
T PRK14618         82 VP   83 (328)
T ss_pred             Cc
Confidence            54

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=95.81  E-value=0.033  Score=48.71  Aligned_cols=69  Identities=23%  Similarity=0.270  Sum_probs=44.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC--CCeEEEE-EcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER--GYIVHAT-VRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~-~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      |++++|.|.|. |.||+.+++.|.+.  +++|.++ +|++.+. .+....    +.      ..-..++.+++.++|+|+
T Consensus         4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~----g~------~~~~~~~eell~~~D~Vv   72 (271)
T PRK13302          4 RPELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGL----RR------PPPVVPLDQLATHADIVV   72 (271)
T ss_pred             CCeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhc----CC------CcccCCHHHHhcCCCEEE
Confidence            55689999995 99999999999873  7888744 5554433 221111    00      001123555567899999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      -++.
T Consensus        73 i~tp   76 (271)
T PRK13302         73 EAAP   76 (271)
T ss_pred             ECCC
Confidence            9876

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.78  E-value=0.017  Score=50.56  Aligned_cols=74  Identities=15%  Similarity=0.137  Sum_probs=48.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      .+++++|.|| |..+++++.+|++.| .+|+++.|+.++. .+......... .....+..+.+...    .+|+|||+-
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~-~~~~~~~~~~~~~~----~~dliINaT  198 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA-AVEAAALADLEGLE----EADLLINAT  198 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-cccccccccccccc----ccCEEEECC
Confidence            4688999997 999999999999999 5899999988776 44433221111 11112222211111    589999997


Q ss_pred             cc
Q 035965           88 AS   89 (348)
Q Consensus        88 ~~   89 (348)
                      ..
T Consensus       199 p~  200 (283)
T COG0169         199 PV  200 (283)
T ss_pred             CC
Confidence            65

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.78  E-value=0.023  Score=49.94  Aligned_cols=77  Identities=16%  Similarity=0.269  Sum_probs=49.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccC-CCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWT-RSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ...++++|.|+ |..|++++..|.+.|. +|++++|+..+. .+..... ..+.......+   ...+...+..+|+|||
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~~~~divIN  200 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVIAAADGVVN  200 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHHhhcCEEEE
Confidence            34678999997 9999999999999996 789999987665 3322111 00110111122   2223334457899999


Q ss_pred             cccc
Q 035965           86 VAAS   89 (348)
Q Consensus        86 ~a~~   89 (348)
                      +...
T Consensus       201 aTp~  204 (283)
T PRK14027        201 ATPM  204 (283)
T ss_pred             cCCC
Confidence            8754

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=95.77  E-value=0.067  Score=40.19  Aligned_cols=85  Identities=20%  Similarity=0.237  Sum_probs=51.5

Q ss_pred             CeEEEeCCC---ChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           12 KTFCVTGAN---GYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGat---GfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |+|+|.|+|   +-.|..+.+.|.+.|++|+.+.-+....         .+...       ..++.+.-+.+|.++-+..
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i---------~G~~~-------y~sl~e~p~~iDlavv~~~   64 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEI---------LGIKC-------YPSLAEIPEPIDLAVVCVP   64 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEE---------TTEE--------BSSGGGCSST-SEEEE-S-
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEE---------CcEEe-------eccccCCCCCCCEEEEEcC
Confidence            579999988   7789999999999999999887554321         11111       1223331246788877654


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      .                        .-+..+++.|.+.| ++.+++.++
T Consensus        65 ~------------------------~~~~~~v~~~~~~g-~~~v~~~~g   88 (116)
T PF13380_consen   65 P------------------------DKVPEIVDEAAALG-VKAVWLQPG   88 (116)
T ss_dssp             H------------------------HHHHHHHHHHHHHT--SEEEE-TT
T ss_pred             H------------------------HHHHHHHHHHHHcC-CCEEEEEcc
Confidence            1                        11446888888888 888999888

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=95.76  E-value=0.039  Score=47.95  Aligned_cols=71  Identities=17%  Similarity=0.133  Sum_probs=56.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFH   85 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih   85 (348)
                      ..+||++.| +|=+|..++-.+.+.|.+|+++||-....  +..        -+-+..|..|.+++..+++  ++|+||-
T Consensus        11 ~a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmqVA--------hrs~Vi~MlD~~al~avv~rekPd~IVp   81 (394)
T COG0027          11 QATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--------HRSYVIDMLDGDALRAVVEREKPDYIVP   81 (394)
T ss_pred             CCeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhhhh--------hheeeeeccCHHHHHHHHHhhCCCeeee
Confidence            456899999 59999999999999999999999965432  111        2347789999999999886  5898876


Q ss_pred             cccc
Q 035965           86 VAAS   89 (348)
Q Consensus        86 ~a~~   89 (348)
                      -...
T Consensus        82 EiEA   85 (394)
T COG0027          82 EIEA   85 (394)
T ss_pred             hhhh
Confidence            5543

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.75  E-value=0.13  Score=47.70  Aligned_cols=106  Identities=16%  Similarity=0.065  Sum_probs=63.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccc--------------------cCCCCC--eEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSK--------------------WTRSDR--LRLFQA   65 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~--------------------~~~~~~--~~~~~~   65 (348)
                      +..+|+|.|+ |.+|++++..|+..|. +++++|.+.-.. .+.+.                    ....+.  ++.+..
T Consensus        41 ~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~  119 (392)
T PRK07878         41 KNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF  119 (392)
T ss_pred             hcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence            4578999996 9999999999999996 677777643111 11110                    001123  334444


Q ss_pred             cCCCcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeee
Q 035965           66 DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTIT  142 (348)
Q Consensus        66 Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~  142 (348)
                      .++. +...++++++|+||.+...                       ...-..+-++|.+.+  ..+|+.++.+.++
T Consensus       120 ~i~~-~~~~~~~~~~D~Vvd~~d~-----------------------~~~r~~ln~~~~~~~--~p~v~~~~~g~~G  170 (392)
T PRK07878        120 RLDP-SNAVELFSQYDLILDGTDN-----------------------FATRYLVNDAAVLAG--KPYVWGSIYRFEG  170 (392)
T ss_pred             cCCh-hHHHHHHhcCCEEEECCCC-----------------------HHHHHHHHHHHHHcC--CCEEEEEeccCEE
Confidence            4443 3456677889999977531                       111223556777777  4588877765333

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=95.74  E-value=0.086  Score=47.41  Aligned_cols=73  Identities=23%  Similarity=0.192  Sum_probs=48.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHH---hh--cCCCEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK---AV--MGCDGVFH   85 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---~~--~~~d~Vih   85 (348)
                      +.+++|+|++|-+|..+++.+...|.+|++++++..+.......    ... ...|..+.+....   ..  .++|++++
T Consensus       167 ~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~  241 (342)
T cd08266         167 GETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKEL----GAD-YVIDYRKEDFVREVRELTGKRGVDVVVE  241 (342)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCC-eEEecCChHHHHHHHHHhCCCCCcEEEE
Confidence            56899999999999999999999999999998876543221111    111 1234444333222   22  25899999


Q ss_pred             ccc
Q 035965           86 VAA   88 (348)
Q Consensus        86 ~a~   88 (348)
                      +++
T Consensus       242 ~~g  244 (342)
T cd08266         242 HVG  244 (342)
T ss_pred             CCc
Confidence            987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08293 PTGR2 Prostaglandin reductase

Probab=95.74  E-value=0.065  Score=48.61  Aligned_cols=37  Identities=27%  Similarity=0.183  Sum_probs=32.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL   48 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~   48 (348)
                      .+|||+||+|-+|..+++.+...|. +|+++++++.+.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~  193 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKC  193 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence            6899999999999999998888898 899998876544

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.73  E-value=0.018  Score=50.77  Aligned_cols=65  Identities=22%  Similarity=0.244  Sum_probs=44.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |+|.|.| .|.+|+.++..|.+.|++|++++|++... .....     +.    .+... ... +.++++|+||-+..
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~-----g~----~~~~~-~~~-~~~~~aDlVilavp   66 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIER-----GL----VDEAS-TDL-SLLKDCDLVILALP   66 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-----CC----ccccc-CCH-hHhcCCCEEEEcCC
Confidence            4799998 69999999999999999999999976543 22111     11    01111 112 24578999998864

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.72  E-value=0.04  Score=49.36  Aligned_cols=37  Identities=24%  Similarity=0.338  Sum_probs=32.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      .++|.|.|+ |.+|+.++..|++.|++|+++++++...
T Consensus         4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~   40 (311)
T PRK06130          4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGAL   40 (311)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence            468999996 9999999999999999999999876543

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.71  E-value=0.071  Score=47.89  Aligned_cols=73  Identities=19%  Similarity=0.253  Sum_probs=48.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcc---hHHHhh-cCCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG---SFDKAV-MGCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~-~~~d~Vih~   86 (348)
                      +.+|||+||+|-+|..+++.+...|.+|+++++++.+..+....    +++.+ .|..+.+   .+.+.. .++|+|+++
T Consensus       144 g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~----Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~  218 (329)
T cd08294         144 GETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKEL----GFDAV-FNYKTVSLEEALKEAAPDGIDCYFDN  218 (329)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCCEE-EeCCCccHHHHHHHHCCCCcEEEEEC
Confidence            57899999999999999999988999999998876554222211    22211 2333222   222222 258999988


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      .+
T Consensus       219 ~g  220 (329)
T cd08294         219 VG  220 (329)
T ss_pred             CC
Confidence            76

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	348
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		1e-74
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		2e-64
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		7e-48
1y1p_A	342	X-Ray Structure Of Aldehyde Reductase With Nadph Le		2e-18
1ujm_A	342	Crystal Structure Of Aldehyde Reductase 2 From Spor		4e-18
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		1e-04
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		1e-04

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score =  276 bits (705), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 144/341 (42%), Positives = 210/341 (61%), Gaps = 22/341 (6%)
Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQA 65
           +S+T CVTGA+G+IGSWLV  LLERGY V ATVRDP  ++    +         L L++A
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKA 63
Query: 66  DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           DL  EGSFD+A+ GC GVFHVA  M+F+    +N        VI P I+  L ++K+C  
Sbjct: 64  DLADEGSFDEAIKGCTGVFHVATPMDFESKDPEN-------EVIKPTIEGMLGIMKSCAA 116
Query: 126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEET 185
           +++V+R+V TSS  T+  ++      PV DESC + +     KK + W+Y +SK L+E+ 
Sbjct: 117 AKTVRRLVFTSSAGTVNIQEHQ---LPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQA 173
Query: 186 AFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI 245
           A+K+A EN ID +++I T V GPF+ SS+P S+   LSPITG+   +SI+     R G  
Sbjct: 174 AWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSII-----RQGQ- 227
Query: 246 ALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQT-FEGENQS 304
             VH++D+CNAHI+L EN +A+G+YIC    C I +    L+ +YP   + T F+G +++
Sbjct: 228 -FVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDEN 286
Query: 305 SVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPP 345
                 SS+KL DLGF +K+ +ED+    + +C   G LPP
Sbjct: 287 LKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLPP 327

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score =  242 bits (618), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 135/326 (41%), Positives = 193/326 (59%), Gaps = 11/326 (3%)
Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG---KLQIFSKWTRSDRLRLFQADLQ 68
           KT CV G  G++ S LVK LL++GY V+ TVRDP    K+    +      L++F+ADL 
Sbjct: 10  KTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLT 69
Query: 69  VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
            E SF+  + GCD VFHVA  + F     +N        +I PAIQ  +N++KAC +++S
Sbjct: 70  DELSFEAPIAGCDFVFHVATPVHFASEDPEN-------DMIKPAIQGVVNVMKACTRAKS 122
Query: 129 VKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFK 188
           VKRV+LTSS + +T     G    VVDE   T I  + + K   W Y  SK L+E+ A+K
Sbjct: 123 VKRVILTSSAAAVTINQLDGTGL-VVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWK 181
Query: 189 FANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALV 248
           FA EN IDL++VI T +AG  LTS VPSSI + +S ITG+    + +  +    GS+++ 
Sbjct: 182 FAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIA 241
Query: 249 HIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPS 308
           H+ED+C AHIF+ E + A G+YICC  +  + E    L   YP  K+ T  G+       
Sbjct: 242 HVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPPKSKL 301
Query: 309 VISSEKLKDLGFNYKHGIEDIICQTI 334
           +ISSEKL   GF++K+GIE+I  +++
Sbjct: 302 IISSEKLVKEGFSFKYGIEEIYDESV 327

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score =  187 bits (475), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 184/336 (54%), Gaps = 25/336 (7%)
Query: 15  CVTGANGYIGSWLVKTLLERGYIVHATVR-DPGKLQIFSKWTR----SDRLRLFQADLQV 69
           CVTG  G++GSW++K+LLE GY V+ T+R DP + +  S  T     S++L  F ADL  
Sbjct: 5   CVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSN 64
Query: 70  EGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESV 129
             SF  A+ GC G+FH A+ ++F ++  + I       V    +   L +LKAC+ S++V
Sbjct: 65  PDSFAAAIEGCVGIFHTASPIDFAVSEPEEI-------VTKRTVDGALGILKACVNSKTV 117
Query: 130 KRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKF 189
           KR + TSS S ++    +G+ + V+DES  + +  + + K  GW Y +SK L+E+   +F
Sbjct: 118 KRFIYTSSGSAVSF---NGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEF 174
Query: 190 ANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVH 249
             +N ID+V++I   + G F+   +P SI+  L  + G  +   +            +VH
Sbjct: 175 GEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVT--------RFHMVH 226
Query: 250 IEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFE--GENQSSVP 307
           ++D+  AHI+L+EN    G+Y C     PI E    L  +YP  ++ T +   E + +  
Sbjct: 227 VDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARL 286
Query: 308 SVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFL 343
             ++++KL D GF++K+ IED+    I  C + G+L
Sbjct: 287 PDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL 322

>pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 96/193 (49%), Gaps = 25/193 (12%)
Query: 15  CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSK-WTRSDRLRLFQA---DLQVE 70
            VTGANG++ S +V+ LLE GY V  T R   KL    K W      R   A   D+  +
Sbjct: 15  LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ 74
Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
           G++D+ + G  GV H+A+ + F  N  D         V+ PAI  TLN L+A   + SVK
Sbjct: 75  GAYDEVIKGAAGVAHIASVVSFS-NKYDE--------VVTPAIGGTLNALRAAAATPSVK 125
Query: 131 RVVLTSS-VSTITAKDS-------SGEWR-PVVDESCQTPIHHVWNKKASGWVYVLSKLL 181
           R VLTSS VS +  K +          W    +D++   P     + + S WVY  SK  
Sbjct: 126 RFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPES---DPQKSLWVYAASKTE 182
Query: 182 SEETAFKFANENK 194
           +E  A+KF +ENK
Sbjct: 183 AELAAWKFMDENK 195

>pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/193 (36%), Positives = 95/193 (49%), Gaps = 25/193 (12%)
Query: 15  CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSK-WTRSDRLRLFQA---DLQVE 70
            VTGANG++ S +V+ LLE GY V  T R   KL    K W      R   A   D   +
Sbjct: 15  LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDXLKQ 74
Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
           G++D+ + G  GV H+A+ + F  N  D         V+ PAI  TLN L+A   + SVK
Sbjct: 75  GAYDEVIKGAAGVAHIASVVSFS-NKYDE--------VVTPAIGGTLNALRAAAATPSVK 125
Query: 131 RVVLTSS-VSTITAKDS-------SGEWR-PVVDESCQTPIHHVWNKKASGWVYVLSKLL 181
           R VLTSS VS +  K +          W    +D++   P     + + S WVY  SK  
Sbjct: 126 RFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPES---DPQKSLWVYAASKTE 182
Query: 182 SEETAFKFANENK 194
           +E  A+KF +ENK
Sbjct: 183 AELAAWKFXDENK 195

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 56/145 (38%), Gaps = 16/145 (11%)
Query: 14  FCVTGANGYIGSWLVKTLLERGY--------IVHATVRDPGKLQIFSKWTRSDRLRLFQA 65
             VTG  G+IGS  V+ LL   Y        IV  ++   G     +      RLR    
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62
Query: 66  DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           D++  G   + + G D + H AA    D ++         S      +Q T  LL+ C  
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAG------ASVFTETNVQGTQTLLQ-CAV 115
Query: 126 SESVKRVVLTSSVSTITAKDSSGEW 150
              V RVV  S+     + D SG W
Sbjct: 116 DAGVGRVVHVSTNQVYGSID-SGSW 139

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 56/145 (38%), Gaps = 16/145 (11%)
Query: 14  FCVTGANGYIGSWLVKTLLERGY--------IVHATVRDPGKLQIFSKWTRSDRLRLFQA 65
             VTG  G+IGS  V+ LL   Y        IV  ++   G     +      RLR    
Sbjct: 3   LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62
Query: 66  DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           D++  G   + + G D + H AA    D ++         S      +Q T  LL+ C  
Sbjct: 63  DIRDAGLLARELRGVDAIVHFAAESHVDRSIAG------ASVFTETNVQGTQTLLQ-CAV 115
Query: 126 SESVKRVVLTSSVSTITAKDSSGEW 150
              V RVV  S+     + D SG W
Sbjct: 116 DAGVGRVVHVSTDEVYGSID-SGSW 139

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	348
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-134
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-130
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-125
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	1e-95
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	3e-55
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-53
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	1e-25
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-23
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	3e-23
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	2e-22
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	5e-21
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	2e-20
1xq6_A	253	Unknown protein; structural genomics, protein stru	4e-18
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	7e-18
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	9e-18
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	9e-18
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	2e-17
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	4e-17
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	4e-17
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	6e-17
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	9e-17
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-16
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	2e-16
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-16
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	2e-16
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	8e-16
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-15
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	5e-15
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	1e-14
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	2e-14
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	2e-14
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	6e-14
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	3e-13
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	3e-13
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	4e-13
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	1e-12
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	7e-12
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	1e-11
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	3e-11
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	4e-11
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	1e-10
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	2e-10
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	3e-10
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	4e-10
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	9e-10
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	1e-09
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	2e-09
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	4e-09
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	7e-09
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	1e-08
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	3e-08
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	3e-08
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	4e-08
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	4e-08
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	4e-08
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	1e-06
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	2e-06
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	2e-06
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-06
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-06
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	4e-06
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	6e-06
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	8e-06
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	9e-06
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	2e-05
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	5e-05
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	9e-05
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	1e-04
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	3e-04
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	3e-04
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	5e-04
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	7e-04

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  384 bits (988), Expect = e-134
 Identities = 135/346 (39%), Positives = 196/346 (56%), Gaps = 15/346 (4%)

Query: 4   PEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG---KLQIFSKWTRSDRL 60
             +     KT CV G  G++ S LVK LL++GY V+ TVRDP    K+    +      L
Sbjct: 2   ATQHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDL 61

Query: 61  RLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLL 120
           ++F+ADL  E SF+  + GCD VFHVA         +D      ++ +I PAIQ  +N++
Sbjct: 62  KIFRADLTDELSFEAPIAGCDFVFHVATP--VHFASEDP-----ENDMIKPAIQGVVNVM 114

Query: 121 KACLKSESVKRVVLTSSVSTITAKDSSGEWRP--VVDESCQTPIHHVWNKKASGWVYVLS 178
           KAC +++SVKRV+LTSS + +T    +       VVDE   T I  + + K   W Y  S
Sbjct: 115 KACTRAKSVKRVILTSSAAAVTI---NQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPAS 171

Query: 179 KLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSV 238
           K L+E+ A+KFA EN IDL++VI T +AG  LTS VPSSI + +S ITG+    + +  +
Sbjct: 172 KTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGM 231

Query: 239 SNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTF 298
               GS+++ H+ED+C AHIF+ E + A G+YICC  +  + E    L   YP  K+ T 
Sbjct: 232 QMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTD 291

Query: 299 EGENQSSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP 344
            G+       +ISSEKL   GF++K+GIE+I  +++      G L 
Sbjct: 292 FGDFPPKSKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLLQ 337

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  374 bits (963), Expect = e-130
 Identities = 143/342 (41%), Positives = 208/342 (60%), Gaps = 22/342 (6%)

Query: 9   GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQ 64
            +S+T CVTGA+G+IGSWLV  LLERGY V ATVRDP  ++    +         L L++
Sbjct: 3   SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWK 62

Query: 65  ADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL 124
           ADL  EGSFD+A+ GC GVFHVA  M+F+   KD      ++ VI P I+  L ++K+C 
Sbjct: 63  ADLADEGSFDEAIKGCTGVFHVATPMDFE--SKDP-----ENEVIKPTIEGMLGIMKSCA 115

Query: 125 KSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEE 184
            +++V+R+V TSS  T+  ++      PV DESC + +     KK + W+Y +SK L+E+
Sbjct: 116 AAKTVRRLVFTSSAGTVNIQEHQL---PVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQ 172

Query: 185 TAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS 244
            A+K+A EN ID +++I T V GPF+ SS+P S+   LSPITG+   +SI       +  
Sbjct: 173 AAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSI-------IRQ 225

Query: 245 IALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQS 304
              VH++D+CNAHI+L EN +A+G+YIC    C I +    L+ +YP   + T       
Sbjct: 226 GQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDE 285

Query: 305 SVPSV-ISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLPP 345
           ++ SV  SS+KL DLGF +K+ +ED+    + +C   G LPP
Sbjct: 286 NLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLPP 327

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  361 bits (928), Expect = e-125
 Identities = 111/339 (32%), Positives = 181/339 (53%), Gaps = 25/339 (7%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVR-DPGKLQIFSKWTR----SDRLRLFQAD 66
              CVTG  G++GSW++K+LLE GY V+ T+R DP + +  S  T     S++L  F AD
Sbjct: 2   GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNAD 61

Query: 67  LQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS 126
           L    SF  A+ GC G+FH A+    D  V +      +  V    +   L +LKAC+ S
Sbjct: 62  LSNPDSFAAAIEGCVGIFHTASP--IDFAVSEP-----EEIVTKRTVDGALGILKACVNS 114

Query: 127 ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETA 186
           ++VKR + TSS S ++    +G+ + V+DES  + +  + + K  GW Y +SK L+E+  
Sbjct: 115 KTVKRFIYTSSGSAVSF---NGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAV 171

Query: 187 FKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIA 246
            +F  +N ID+V++I   + G F+   +P SI+  L  + G  +   +            
Sbjct: 172 LEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVT--------RFH 223

Query: 247 LVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFE--GENQS 304
           +VH++D+  AHI+L+EN    G+Y C     PI E    L  +YP  ++ T +   E + 
Sbjct: 224 MVHVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKG 283

Query: 305 SVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFL 343
           +    ++++KL D GF++K+ IED+    I  C + G+L
Sbjct: 284 ARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL 322

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  286 bits (735), Expect = 1e-95
 Identities = 86/347 (24%), Positives = 135/347 (38%), Gaps = 35/347 (10%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK----LQIFSKWTRSDRLRLFQA 65
                 VTGANG++ S +V+ LLE GY V  T R   K     + +              
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69

Query: 66  DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           D+  +G++D+ + G  GV H+A+ + F     +         V+ PAI  TLN L+A   
Sbjct: 70  DMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDE---------VVTPAIGGTLNALRAAAA 120

Query: 126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDESC-------QTPIHHVWNKKASGWVYVLS 178
           + SVKR VLTSS  +      + E    +DE         +       + + S WVY  S
Sbjct: 121 TPSVKRFVLTSSTVSALIPKPNVEGI-YLDEKSWNLESIDKAKTLPESDPQKSLWVYAAS 179

Query: 179 KLLSEETAFKFANENK--IDLVSVITTTVAGPFLTSSVP--SSIQVLLSPITGDSKFFSI 234
           K  +E  A+KF +ENK    L +V+     G          S+   ++S   G+      
Sbjct: 180 KTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVS---- 235

Query: 235 LSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQ-YICCVKSCPISEFIDHLKLEYPSS 293
                  M     V   DI   H+  +   + + +       +   +  +   +  YPS 
Sbjct: 236 --PALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSK 293

Query: 294 KMQTF---EGENQSSVPSVISSEKLKDLGFNYKHGIEDIICQTIASC 337
                   +G++ S   +  S E LK LG      IE+ I   + S 
Sbjct: 294 TFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSE 340

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  179 bits (456), Expect = 3e-55
 Identities = 45/262 (17%), Positives = 83/262 (31%), Gaps = 49/262 (18%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           K   + GA+G++GS L+   L RG+ V A VR P K++       ++ L++ +AD+    
Sbjct: 5   KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK-----IENEHLKVKKADVSSLD 59

Query: 72  SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR 131
              +   G D V         +              + +  I+  L ++    K+  V R
Sbjct: 60  EVCEVCKGADAVISAFNPGWNN------------PDIYDETIKVYLTIIDGVKKA-GVNR 106

Query: 132 VVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFAN 191
            ++     ++           ++D             +    +    K L E        
Sbjct: 107 FLMVGGAGSLFIAPG----LRLMDS-----------GEVPENILPGVKALGEFYLNFLMK 151

Query: 192 ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIE 251
           E +ID V         P                 TG  +       V     S   + +E
Sbjct: 152 EKEIDWVFFSPAADMRP--------------GVRTGRYRLGKDDMIVDIVGNSH--ISVE 195

Query: 252 DICNAHIFLMENDRAQGQYICC 273
           D   A I  +E+ +   +    
Sbjct: 196 DYAAAMIDELEHPKHHQERFTI 217

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  178 bits (454), Expect = 1e-53
 Identities = 55/371 (14%), Positives = 112/371 (30%), Gaps = 61/371 (16%)

Query: 2   EKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLR 61
           E+P    G    + V GA G +G    + +   G+ +    R   ++Q            
Sbjct: 4   EQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----AYLEPE 59

Query: 62  LFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLK 121
              A++      ++A+ G DGV   A             +  V       A+  T     
Sbjct: 60  CRVAEMLDHAGLERALRGLDGVIFSAGYYPSR---PRRWQEEVA-----SALGQTNPFYA 111

Query: 122 ACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLL 181
           ACL++  V R++   S   +              E       +          YVL K  
Sbjct: 112 ACLQA-RVPRILYVGSAYAMPRHPQ----GLPGHEGL----FYDSLPSGKSS-YVLCKWA 161

Query: 182 SEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNR 241
            +E A + A    + +V  I   V G       P++ +V+ +   G  +    ++     
Sbjct: 162 LDEQAREQARNG-LPVVIGIPGMVLGELDIG--PTTGRVITAIGNG--EMTHYVA----- 211

Query: 242 MGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLK-------------- 287
            G   ++   +     +  +E  R   +Y+    +  +++    +               
Sbjct: 212 -GQRNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMA 270

Query: 288 -------LEYPSSKMQ------TFEGENQSSVPSVISSEK-LKDLGFNYKHGIEDIICQT 333
                  L     ++               +    +   K  ++LGF     ++D + + 
Sbjct: 271 MARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRA 330

Query: 334 IASCVDCGFLP 344
           I    D G+  
Sbjct: 331 IDWFRDNGYFN 341

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  102 bits (257), Expect = 1e-25
 Identities = 40/193 (20%), Positives = 63/193 (32%), Gaps = 31/193 (16%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           VTGA G +G  + + L     I+      P                  Q DL    + + 
Sbjct: 8   VTGAAGQLGRVMRERLAPMAEILRLADLSPLD-------PAGPNEECVQCDLADANAVNA 60

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
            V GCDG+ H+       I+V+   E  +Q    N  I    NL +A        R+V  
Sbjct: 61  MVAGCDGIVHLGG-----ISVEKPFEQILQG---N--IIGLYNLYEAARAHG-QPRIVFA 109

Query: 136 SSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKI 195
           SS  TI       +   +  +    P            +Y +SK   E  A  + ++   
Sbjct: 110 SSNHTI---GYYPQTERLGPDVPARPDG----------LYGVSKCFGENLARMYFDKFGQ 156

Query: 196 DLVSVITTTVAGP 208
           +   V   +    
Sbjct: 157 ETALVRIGSCTPE 169

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 97.0 bits (242), Expect = 2e-23
 Identities = 40/185 (21%), Positives = 65/185 (35%), Gaps = 31/185 (16%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           VTGA G +GS +   L    + V   + D     I           +   DL    +   
Sbjct: 7   VTGAAGGVGSAIRPHLGTLAHEV--RLSD-----IVDLGAAEAHEEIVACDLADAQAVHD 59

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
            V  CDG+ H+       ++V+      +Q    N  I    NL +A        R+V  
Sbjct: 60  LVKDCDGIIHLGG-----VSVERPWNDILQ---AN--IIGAYNLYEAARNLG-KPRIVFA 108

Query: 136 SSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKI 195
           SS  TI           +  E  + P            +Y LSK   E+ A  + ++  I
Sbjct: 109 SSNHTI---GYYPRTTRIDTEVPRRPDS----------LYGLSKCFGEDLASLYYHKFDI 155

Query: 196 DLVSV 200
           + +++
Sbjct: 156 ETLNI 160

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 97.0 bits (242), Expect = 3e-23
 Identities = 56/339 (16%), Positives = 121/339 (35%), Gaps = 60/339 (17%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           VTG++G IG+ LV  L E+    +    D     I  +   +  ++    D+      D+
Sbjct: 4   VTGSSGQIGTELVPYLAEKYGKKNVIASD-----IVQR--DTGGIKFITLDVSNRDEIDR 56

Query: 76  AV--MGCDGVFHVAA-----SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
           AV     D +FH+A        +       +     +   +N  +  T N+L+A  K   
Sbjct: 57  AVEKYSIDAIFHLAGILSAKGEK-------DPALAYK---VN--MNGTYNILEAA-KQHR 103

Query: 129 VKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFK 188
           V++VV+ S++              V   +   P            ++ ++K+ +E     
Sbjct: 104 VEKVVIPSTIGVF---GPETPKNKVPSITITRPRT----------MFGVTKIAAELLGQY 150

Query: 189 FANENKIDLVSVITTTVAGPF-----LTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMG 243
           +  +  +D+ S+    +          T+     I      +  +   +    + +  + 
Sbjct: 151 YYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEI--FYYAVKREK--YKCYLAPNRAL- 205

Query: 244 SIALVHIEDICNAHIFLMENDRAQGQ----YICCVKSCPISEFIDHLKLEYPSSKMQTFE 299
              ++++ D   A + L E DR +      Y     +   SE    +K   P  +++  E
Sbjct: 206 --PMMYMPDALKALVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKE 263

Query: 300 GENQS---SVPSVISSEK-LKDLGFNYKHGIEDIICQTI 334
                   + P  + S +   + GF+ ++ ++  I   I
Sbjct: 264 DFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMI 302

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 94.9 bits (237), Expect = 2e-22
 Identities = 74/345 (21%), Positives = 126/345 (36%), Gaps = 72/345 (20%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
               VTG  G+IGS +V  L E    +   V D   L   ++   ++  RL +ADL    
Sbjct: 2   SLIVVTGGAGFIGSHVVDKLSE-SNEI--VVID--NLSSGNEEFVNEAARLVKADLA-AD 55

Query: 72  SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPA------IQSTLNLLKACLK 125
                + G + V+H+AA+              V+    NP       + +T  LL+A  K
Sbjct: 56  DIKDYLKGAEEVWHIAAN------------PDVRIGAENPDEIYRNNVLATYRLLEAMRK 103

Query: 126 SESVKRVVLTSSVSTITAKDSSGE--WRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSE 183
           +  V R+V TS+ +        GE    P  ++    PI           +Y  SKL  E
Sbjct: 104 AG-VSRIVFTSTSTVY------GEAKVIPTPEDYPTHPIS----------LYGASKLACE 146

Query: 184 ETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSI--QVLLSP----ITGD---SKFFSI 234
                + +   +         V G   T  V      ++  +P    I G+   +K +  
Sbjct: 147 ALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSY-- 204

Query: 235 LSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQY-ICCVKSCPISEFIDHLKLEYPSS 293
                        ++I D  +A +F +  D     + I       +    + +  E   S
Sbjct: 205 -------------IYISDCVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLS 251

Query: 294 KMQTFEGENQSS---VP-SVISSEKLKDLGFNYKHGIEDIICQTI 334
               F G ++     VP  ++S EKLK LG+  ++  E+ +   +
Sbjct: 252 PRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAV 296

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 91.1 bits (227), Expect = 5e-21
 Identities = 65/351 (18%), Positives = 110/351 (31%), Gaps = 86/351 (24%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRD---PGKLQIFSKWTRSDRLRLFQADLQ 68
           K   +TG  G IGS + + LLERG  V     D    G+ +          L   +  + 
Sbjct: 22  KKVFITGICGQIGSHIAELLLERGDKV--VGIDNFATGRREHLKDH---PNLTFVEGSIA 76

Query: 69  VEGSFDKAVMGC--DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS 126
                ++ +     D V H AAS +       + + +   T+ N       N+++A  K+
Sbjct: 77  DHALVNQLIGDLQPDAVVHTAASYK-------DPDDWYNDTLTN--CVGGSNVVQAAKKN 127

Query: 127 ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI--HHVWNKKASGWVYVLSKLLSEE 184
             V R V   +          G       +  Q P+   H  N   S   Y +SK  +E+
Sbjct: 128 N-VGRFVYFQTALCY------G------VKPIQQPVRLDHPRNPANS--SYAISKSANED 172

Query: 185 ---------TAFKFANENKIDLVSVITTTVAGPFLTSSV-PSSIQVLLS--PIT-GDSK- 230
                      F+ AN             V GP   S   P   Q L          ++ 
Sbjct: 173 YLEYSGLDFVTFRLAN-------------VVGPRNVSGPLPIFFQRLSEGKKCFVTKARR 219

Query: 231 -FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQY-ICCVKSCPISEFIDHLK- 287
            F                V ++D+  A +  ++     G Y         I E  D +  
Sbjct: 220 DF----------------VFVKDLARATVRAVDGV-GHGAYHFSSGTDVAIKELYDAVVE 262

Query: 288 -LEYPSSKMQTFEGENQSSVP-SVISSEKL-KDLGFNYKHGIEDIICQTIA 335
            +  PS              P  ++   +  +D G      +++ +   +A
Sbjct: 263 AMALPSYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVA 313

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 89.2 bits (222), Expect = 2e-20
 Identities = 47/343 (13%), Positives = 108/343 (31%), Gaps = 71/343 (20%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVE 70
           S    VTG  G++G ++V+++   G      +               +      +D  +E
Sbjct: 2   SLKIAVTGGTGFLGQYVVESIKNDGNTP--IILTR-----SIGNKAINDYEYRVSDYTLE 54

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
                 +   D V H+AA+       +  I  +      N     T NL  AC ++  + 
Sbjct: 55  -DLINQLNDVDAVVHLAAT----RGSQGKISEF----HDN--EILTQNLYDACYENN-IS 102

Query: 131 RVVLTSSVSTITAKDSS----GEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETA 186
            +V  S+         S        P  ++    P            +Y +SKL  E   
Sbjct: 103 NIVYAST--------ISAYSDETSLPWNEKELPLPDL----------MYGVSKLACEHIG 144

Query: 187 FKFANENKIDLVSVITTTVAGPFLTSS--VPSSIQVLLS----PITGDSK----FFSILS 236
             ++ +  + + ++    + G    ++  +    +         +  +S     F     
Sbjct: 145 NIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREF----- 199

Query: 237 SVSNRMGSIALVHIEDICNAHIFLMENDRAQGQY-ICCVKSCPISEFIDHLKLEYPSSKM 295
                      ++ +D   + I+ ++ ++  G + I    +    E  + +   + +   
Sbjct: 200 -----------LYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDN 248

Query: 296 QTFEGENQSSVP--SVISSEKLK-DLGFNYKHGIEDIICQTIA 335
              +  N +     S + S K K  L F+  +     + +   
Sbjct: 249 LLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHL 291

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 81.8 bits (202), Expect = 4e-18
 Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 15/140 (10%)

Query: 8   TGRSKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQIFSKWTRSDRLRLFQA 65
           +    T  VTGA+G  G  + K L E    ++    VR     +            +F  
Sbjct: 1   SANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----GGEADVFIG 55

Query: 66  DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAI-------QSTLN 118
           D+    S + A  G D +  + +++       D  +      +                N
Sbjct: 56  DITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKN 115

Query: 119 LLKACLKSESVKRVVLTSSV 138
            + A  K   VK +V+  S+
Sbjct: 116 QIDAA-KVAGVKHIVVVGSM 134

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 81.8 bits (203), Expect = 7e-18
 Identities = 65/348 (18%), Positives = 109/348 (31%), Gaps = 78/348 (22%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           VTG  G+IGS LV  L+E GY V   V D   L    +   +    L   DL+       
Sbjct: 5   VTGGAGFIGSHLVDKLVELGYEV--VVVD--NLSSGRREFVNPSAELHVRDLKDYSWGAG 60

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
                D VFH AA+      V+ +    +     N  + +T N+L+   ++  V+ VV  
Sbjct: 61  I--KGDVVFHFAAN----PEVRLSTTEPIVHFNEN--VVATFNVLEWARQT-GVRTVVFA 111

Query: 136 SSVSTITAKDSSGE--WRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN 193
           SS +        G+    P  +E    PI           VY  +K   E     +A   
Sbjct: 112 SSSTVY------GDADVIPTPEEEPYKPIS----------VYGAAKAAGEVMCATYARLF 155

Query: 194 KIDLVSVITTTVAGPFLTSSV-----------PSSIQVLLSPITGD---SKFFSILSSVS 239
            +  ++V    V GP L   V           P+ ++VL     GD    K +       
Sbjct: 156 GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVL-----GDGTQRKSY------- 203

Query: 240 NRMGSIALVHIEDICNAHIFLMENDRAQGQY-----ICCVKSCPISEFIDHLKLEYPSSK 294
                   +++ D   A +   +             +  V +  + +    +        
Sbjct: 204 --------LYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRP 255

Query: 295 MQTFEGENQSSVP-------SVISSEKLKD-LGFNYKHGIEDIICQTI 334
                                 ++  KL    G+       + + +T 
Sbjct: 256 EIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTA 303

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 79.7 bits (197), Expect = 9e-18
 Identities = 28/142 (19%), Positives = 46/142 (32%), Gaps = 19/142 (13%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           + GA G  G   +   ++ GY V   VRD  +L             +   D+      DK
Sbjct: 8   IFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR----PAHVVVGDVLQAADVDK 63

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
            V G D V  +  +     N         +            N++ A  K+  V +VV  
Sbjct: 64  TVAGQDAVIVLLGT----RNDLSPTTVMSEGAR---------NIVAAM-KAHGVDKVVAC 109

Query: 136 SSVSTIT-AKDSSGEWRPVVDE 156
           +S   +          + V D+
Sbjct: 110 TSAFLLWDPTKVPPRLQAVTDD 131

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 82.3 bits (204), Expect = 9e-18
 Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 32/213 (15%)

Query: 5   EESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVH-----ATVRDP--GKLQIFSKWTRS 57
           +E   + K + +TG  G+IGS L++TLL+    V      AT       +++      + 
Sbjct: 21  KELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQW 80

Query: 58  DRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTL 117
              +  Q D++     + A  G D V H AA      +V  +I   + S   N  I   L
Sbjct: 81  SNFKFIQGDIRNLDDCNNACAGVDYVLHQAAL----GSVPRSINDPITSNATN--IDGFL 134

Query: 118 NLLKACLKSESVKRVVLTSSVSTITAKDSSG--EWRPVVDESCQTPIHHVWNKKASGWVY 175
           N+L A   ++ V+     +S ST       G     P V+++   P+            Y
Sbjct: 135 NMLIAARDAK-VQSFTYAASSSTY------GDHPGLPKVEDTIGKPLS----------PY 177

Query: 176 VLSKLLSEETAFKFANENKIDLVSVITTTVAGP 208
            ++K ++E  A  F+       + +    V G 
Sbjct: 178 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGR 210

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 81.6 bits (202), Expect = 2e-17
 Identities = 56/286 (19%), Positives = 100/286 (34%), Gaps = 62/286 (21%)

Query: 1   MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRL 60
           +E+ +     +    +TGA G+I S + + L   G+ V     D  K +  ++    D  
Sbjct: 19  LEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYV--IASDWKKNEHMTEDMFCDEF 76

Query: 61  RLFQADLQVEGSFDKAVMGCDGVFHVAASME-FDINVKDNIETYVQSTVINPAIQSTLNL 119
            L   DL+V  +  K   G D VF++AA M        ++      +T+I+       N+
Sbjct: 77  HL--VDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMIS------FNM 128

Query: 120 LKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGW------ 173
           ++A   +  +KR    SS               +  E  Q    +V  K++  W      
Sbjct: 129 IEAARIN-GIKRFFYASSAC-------------IYPEFKQLETTNVSLKESDAWPAEPQD 174

Query: 174 VYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLT-----SSVPSSI--QVLLS--P 224
            + L KL +EE    +  +  I+        + GPF T        P++   +   S   
Sbjct: 175 AFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDR 234

Query: 225 IT--GDSK----FFSILSSVSNRMGSIALVHIEDICNAHIFLMEND 264
               GD      F                  I++     + L ++D
Sbjct: 235 FEMWGDGLQTRSF----------------TFIDECVEGVLRLTKSD 264

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 79.4 bits (196), Expect = 4e-17
 Identities = 50/337 (14%), Positives = 97/337 (28%), Gaps = 84/337 (24%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
               + G  G +G  L + L  +G+ V    R    +           ++   AD+    
Sbjct: 4   SKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMP--------AGVQTLIADVTRPD 54

Query: 72  SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR 131
           +    V     +     +   + + +    +YV         +   N L A L+   ++ 
Sbjct: 55  TLASIVHLRPEILVYCVAAS-EYSDEHYRLSYV---------EGLRNTLSA-LEGAPLQH 103

Query: 132 VVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFAN 191
           V   SS           EW   +DE   TP         SG       +L  E       
Sbjct: 104 VFFVSSTGVY--GQEVEEW---LDED--TPPIAK---DFSGKR-----MLEAEALL---- 144

Query: 192 ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS-----KFFSILSSVSNRMGSIA 246
                               ++  S+I +  S I G       +          R     
Sbjct: 145 --------------------AAYSSTI-LRFSGIYGPGRLRMIRQAQTPEQWPARNAWTN 183

Query: 247 LVHIEDICNAHIFLMEND---RAQGQYICC-VKSCPISEFIDH----LKLEYPSSKMQTF 298
            +H +D      +L++       +  YI    +  P+ + +        + YP+      
Sbjct: 184 RIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAG-ATPP 242

Query: 299 EGENQSSVPSVISSEKLKDLGF-----NYKHGIEDII 330
              N+      +S+ +L   G+     +Y  G   ++
Sbjct: 243 VQGNK-----KLSNARLLASGYQLIYPDYVSGYGALL 274

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 78.5 bits (194), Expect = 4e-17
 Identities = 29/141 (20%), Positives = 51/141 (36%), Gaps = 18/141 (12%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           V GANG +  +L+  L  +G+   A VR+  +     +   SD   +  A+L  E  F  
Sbjct: 26  VVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASD---IVVANL--EEDFSH 80

Query: 76  AVMGCDGVFHVA-ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL 134
           A    D V   A +      +    I+               +  ++   +   +KR ++
Sbjct: 81  AFASIDAVVFAAGSGPHTGADKTILIDL-----------WGAIKTIQEA-EKRGIKRFIM 128

Query: 135 TSSVSTITAKDSSGEWRPVVD 155
            SSV T+         R  + 
Sbjct: 129 VSSVGTVDPDQGPMNMRHYLV 149

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 79.7 bits (197), Expect = 6e-17
 Identities = 67/368 (18%), Positives = 108/368 (29%), Gaps = 78/368 (21%)

Query: 5   EESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHAT--------VRDPGKLQIFSKWTR 56
           E    +     + GA G +G  L + L++ G +            V  P           
Sbjct: 8   ENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEA-----PAGF 62

Query: 57  SDRLRLFQADLQVEGSFDKAV-MGCDGVFHVAASM------EFDINVKDNIETYVQSTVI 109
           S  +    ADL   G  +K V    D +FH+AA +      +FD   + N++        
Sbjct: 63  SGAVDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLD-------- 114

Query: 110 NPAIQSTLNLLKAC----LKSESVKRVVLTSSVST--ITAKDSSGEWRPVVDESCQTPIH 163
                 T  L  A      K     RVV TSS++              P+ DE   TP+ 
Sbjct: 115 -----GTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPY------PIPDEFHTTPLT 163

Query: 164 HVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPF-----LTSSVPSSI 218
                      Y   K + E     ++     D + +   T+           S   S+I
Sbjct: 164 ----------SYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNI 213

Query: 219 QVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQG----QYICCV 274
             L  P+ G      +    S R                I     D  +           
Sbjct: 214 --LREPLVGQE--AVLPVPESIRHW---HASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG 266

Query: 275 KSCPISEFIDHLKLEYPSSKMQTFEGENQ-------SSVPSVISSEKLKDLGFNYKHGIE 327
            S  + E I+ L+       +     E                 +++ ++LGF  +   E
Sbjct: 267 LSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKRARELGFTAESSFE 326

Query: 328 DIICQTIA 335
           +II   I 
Sbjct: 327 EIIQVHIE 334

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 79.3 bits (196), Expect = 9e-17
 Identities = 51/277 (18%), Positives = 94/277 (33%), Gaps = 40/277 (14%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVR--DPGKLQIFSKW--TRSDRLRLFQA 65
            +    V G  G++GS LVK LLE G      V   D   L    K        +R  + 
Sbjct: 31  ANTNVMVVGGAGFVGSNLVKRLLELGV---NQVHVVD--NLLSAEKINVPDHPAVRFSET 85

Query: 66  DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
            +  +          D VFH+A         + +I   +     N    +TL L +    
Sbjct: 86  SITDDALLASLQDEYDYVFHLATY----HGNQSSIHDPLADHENN--TLTTLKLYERLKH 139

Query: 126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEET 185
            + +K+VV +++  +I       E     D++  T    + +   +   Y +SK+  E  
Sbjct: 140 FKRLKKVVYSAAGCSI------AE--KTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFY 191

Query: 186 AFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI 245
           +  +  ++++  V      V GP        + +   +P T           +   +  +
Sbjct: 192 SVYYHKQHQLPTVRARFQNVYGPGEI---LGAGRWRGTPATVWRNVTPTF--IYKALKGM 246

Query: 246 AL------------VHIEDICNAHIFLMENDRAQGQY 270
            L            + +ED+ N  I    +    G Y
Sbjct: 247 PLPLENGGVATRDFIFVEDVANGLIACAADGTPGGVY 283

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 76.6 bits (189), Expect = 1e-16
 Identities = 26/125 (20%), Positives = 51/125 (40%), Gaps = 20/125 (16%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           + G+ G +G  L+K+L    Y ++A  R   ++  ++          F  D   E    K
Sbjct: 5   IVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVK----AVHFDVDWTPE-EMAK 59

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
            + G D + +V+ S       K  ++  +   V          L++A  +   VKR +L 
Sbjct: 60  QLHGMDAIINVSGSGG-----KSLLKVDLYGAV---------KLMQAA-EKAEVKRFILL 104

Query: 136 SSVST 140
           S++ +
Sbjct: 105 STIFS 109

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 76.8 bits (189), Expect = 2e-16
 Identities = 22/137 (16%), Positives = 43/137 (31%), Gaps = 26/137 (18%)

Query: 2   EKPEESTGRSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKLQIFSKWTRSDRL 60
            +     G  K   + GA G I   ++  L ++         R P K+            
Sbjct: 14  RENLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP----YPTNS 69

Query: 61  RLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLL 120
           ++   D+    +  +A+ G D V+      + D                        +++
Sbjct: 70  QIIMGDVLNHAALKQAMQGQDIVYANLTGEDLD--------------------IQANSVI 109

Query: 121 KACLKSESVKRVVLTSS 137
            A  K+  VKR++   S
Sbjct: 110 AAM-KACDVKRLIFVLS 125

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 78.5 bits (194), Expect = 2e-16
 Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 26/144 (18%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIV-----HATVRDPG--KLQIFSKWTRSDRLRL 62
             KT+ +TG  G+IGS L++ LL+   +V      +T       +++      +  R   
Sbjct: 24  SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCF 83

Query: 63  FQADLQVEGSFDKAVMGCDGVFHVAA------SMEFDINVKDNIETYVQSTVINPAIQST 116
            + D++   + ++ + G D V H AA      S+        +  T   +   N  I   
Sbjct: 84  IEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIV-------DPITTNAT---N--ITGF 131

Query: 117 LNLLKACLKSESVKRVVLTSSVST 140
           LN+L A  K+  V+     +S ST
Sbjct: 132 LNILHAA-KNAQVQSFTYAASSST 154

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 77.6 bits (192), Expect = 2e-16
 Identities = 73/367 (19%), Positives = 119/367 (32%), Gaps = 113/367 (30%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRD---PGKLQIFSKWTRSDRLRLFQADLQVEGS 72
           VTG  G+IGS +V+ LL RG  V   V D    GK     +      +  F+ DL+ +  
Sbjct: 5   VTGGAGFIGSHIVEDLLARGLEV--AVLDNLATGK-----RENVPKGVPFFRVDLRDKEG 57

Query: 73  FDKAVMGC--DGVFHVAASMEFDINVKDNIETYVQSTVINPA------IQSTLNLLKACL 124
            ++A        V H AA               V+ +V +P       +   LNLL+AC 
Sbjct: 58  VERAFREFRPTHVSHQAAQ------------ASVKVSVEDPVLDFEVNLLGGLNLLEACR 105

Query: 125 KSESVKRVVLTSSVSTITAKDSSGEW--RPVVDESC-QTPIHHVWNKKASGWVYVLSKLL 181
           +   V+++V  S+   I      GE       +E+    P     +       Y  SK  
Sbjct: 106 QY-GVEKLVFASTGGAI-----YGEVPEGERAEETWPPRPK----S------PYAASKAA 149

Query: 182 SEE-------------TAFKFANENKIDLVSVITTTVAGPFLTSS-----VPSSIQVLLS 223
            E               + ++ N             V GP          V    + +L 
Sbjct: 150 FEHYLSVYGQSYGLKWVSLRYGN-------------VYGPRQDPHGEAGVVAIFAERVLK 196

Query: 224 --PIT-------GDSK----FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQY 270
             P+T       GD      +                V++ D+  AH   +     +G Y
Sbjct: 197 GLPVTLYARKTPGDEGCVRDY----------------VYVGDVAEAHALALF--SLEGIY 238

Query: 271 -ICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVP-SVISSEKLKDLGFNYKHGIED 328
            +   +     E +  +      +            +  SV+S  KL   G+  K G ++
Sbjct: 239 NVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKLMAHGWRPKVGFQE 298

Query: 329 IICQTIA 335
            I  T+ 
Sbjct: 299 GIRLTVD 305

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 76.4 bits (188), Expect = 8e-16
 Identities = 40/270 (14%), Positives = 67/270 (24%), Gaps = 69/270 (25%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQ-VE 70
           KT  V GA G  G+ L++     G+ V A V     L    +      + LFQ  L    
Sbjct: 6   KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI-AEELQAIPNVTLFQGPLLNNV 64

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
              D    G    F                     ++     I    +L  A  ++ +++
Sbjct: 65  PLMDTLFEGAHLAFI------------------NTTSQAGDEIAIGKDLADAAKRAGTIQ 106

Query: 131 RVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK-------KASG--WVYVLSKLL 181
             +     S++      G W           +     K       +  G    +V     
Sbjct: 107 HYIY----SSMPDHSLYGPW---------PAVPMWAPKFTVENYVRQLGLPSTFVY---- 149

Query: 182 SEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNR 241
                    N          T+     F    +P       +P   D     +     + 
Sbjct: 150 ---AGIYNNN---------FTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWL--DAEHD 195

Query: 242 MGSIALVHIEDICNAHIFLMENDRAQGQYI 271
           +G              IF     +  G  I
Sbjct: 196 VGPAL---------LQIFKDGPQKWNGHRI 216

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 73.9 bits (181), Expect = 2e-15
 Identities = 33/256 (12%), Positives = 73/256 (28%), Gaps = 54/256 (21%)

Query: 15  CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFD 74
            + GA G  GS +++    RG+ V A VR+ GK+           + + Q D  +     
Sbjct: 4   GIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-----HKDINILQKD--IFDLTL 56

Query: 75  KAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL 134
             +   + V              D  E +V S           +L+          R+++
Sbjct: 57  SDLSDQNVVVDAYGI------SPDEAEKHVTSLD---------HLISVL-NGTVSPRLLV 100

Query: 135 TSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENK 194
               +++       +   +++        +    +A                   +++ +
Sbjct: 101 VGGAASL---QIDEDGNTLLESKGLREAPYYPTARAQAKQL----------EHLKSHQAE 147

Query: 195 IDLVSVITTTVAGPF-LTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDI 253
                +  + +  P   T         LL    G+S                  + +ED 
Sbjct: 148 FSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSF-----------------ISMEDY 190

Query: 254 CNAHIFLMENDRAQGQ 269
             A +  +E      +
Sbjct: 191 AIAVLDEIERPNHLNE 206

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 74.4 bits (182), Expect = 5e-15
 Identities = 35/279 (12%), Positives = 75/279 (26%), Gaps = 30/279 (10%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYI-----VHATVRDPGKLQIFSKWTRSDRLRLFQA 65
           S    + G  G IG+ L + L           V+   R          W   + +   Q 
Sbjct: 1   SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTR-----PAWHEDNPINYVQC 55

Query: 66  DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           D+         +     V HV      +   +   +   ++       +   N+L A + 
Sbjct: 56  DISDPDDSQAKLSPLTDVTHVFYVTWAN---RSTEQENCEANS-----KMFRNVLDAVIP 107

Query: 126 -SESVKRVVLTSSVSTITAKDSSGEWR-PVVDESCQTPIHHVWNKKASGWVYVLSKLLSE 183
              ++K + L +       K   G +      ES   P      +      Y   +   +
Sbjct: 108 NCPNLKHISLQTG-----RKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLE---D 159

Query: 184 ETAFKFANENKIDLVSVITTTVAGPFLTS--SVPSSIQVLLSPITGDSKFFSILSSVSNR 241
               +   +  +         + G    S  ++  ++ V  +    + K        +  
Sbjct: 160 IMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAW 219

Query: 242 MGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPIS 280
            G       + I   HI+   +  A+ +           
Sbjct: 220 DGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFK 258

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 52/296 (17%), Positives = 95/296 (32%), Gaps = 83/296 (28%)

Query: 1   MEKPEESTG-----RSKTFCVTGANGYIGSWLVKTLLERGYIVHATV-----RDPGKLQI 50
           M+ P+  TG       +   VTG  G+IGS +VK L ++G      +     +D  K   
Sbjct: 31  MDSPDLGTGGGSGIEGRMIIVTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTKFVN 88

Query: 51  FSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVIN 110
                 +D +   + D  ++    +     + +FH  A      +  +    Y+     N
Sbjct: 89  LVDLNIADYMD--KEDFLIQIMAGEEFGDVEAIFHEGAC----SSTTEWDGKYMMDN--N 140

Query: 111 PAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA 170
              Q +  LL  CL+ E     +  SS +T            +     + P++       
Sbjct: 141 --YQYSKELLHYCLERE--IPFLYASSAATY----GGRTSDFIESREYEKPLN------- 185

Query: 171 SGWVYVLSKLLSEETAFKFANENKIDLV-------------------SVITTTVAGPFLT 211
              V+  SK L +E   +   E    +V                   SV         L 
Sbjct: 186 ---VFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVA------FHLN 236

Query: 212 SSVPSSIQVLLSPITGDSKF---FSILSSVSNRMGSIALVHIEDICNAHIFLMEND 264
           + + +     L    G   F   F               V++ D+ + +++ +EN 
Sbjct: 237 TQLNNGESPKL--FEGSENFKRDF---------------VYVGDVADVNLWFLENG 275

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 72.2 bits (178), Expect = 2e-14
 Identities = 40/201 (19%), Positives = 68/201 (33%), Gaps = 48/201 (23%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRD------PGKLQIFSKWTRSDRLRLFQ 64
                +TG  G+IG  L + L+  G  V  TV D          +   K+     L L +
Sbjct: 7   KHRILITGGAGFIGGHLARALVASGEEV--TVLDDLRVPPMIPPEGTGKFLEKPVLELEE 64

Query: 65  ADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL 124
            DL               V+H+A+      +V  + +  +   + N  + S  +LL  C 
Sbjct: 65  RDLS----------DVRLVYHLASH----KSVPRSFKQPL-DYLDN--VDSGRHLLALCT 107

Query: 125 KSESVKRVVLTSSVSTITAKDSS----GEWRPVVDESCQTPIHHVWNKKASGWVYVLSKL 180
               V +VV+ S+               +  P  ++S  +P         S   Y  SK+
Sbjct: 108 SVG-VPKVVVGST--------CEVYGQADTLPTPEDSPLSPR--------S--PYAASKV 148

Query: 181 LSEETAFKFANENKIDLVSVI 201
             E  A      +    V ++
Sbjct: 149 GLEMVAGAHQRASVAPEVGIV 169

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 72.3 bits (177), Expect = 2e-14
 Identities = 46/323 (14%), Positives = 97/323 (30%), Gaps = 73/323 (22%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           +TGA G++G  L   L                +    + T+ + L             + 
Sbjct: 5   ITGAKGFVGKNLKADLTSTTDHH---------IFEVHRQTKEEEL-------------ES 42

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
           A++  D + H+A      +N  ++ + +    V         ++L    ++     ++L+
Sbjct: 43  ALLKADFIVHLAG-----VNRPEHDKEFSLGNVSY-----LDHVLDILTRNTKKPAILLS 92

Query: 136 SSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKI 195
           SS                      T  +           Y  SKL  E+   ++A E   
Sbjct: 93  SS-------------------IQATQDNP----------YGESKLQGEQLLREYAEEYGN 123

Query: 196 DLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICN 255
            +       + G +   +  S I      I  + +       V++R   + L +++DI  
Sbjct: 124 TVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEI-----QVNDRNVELTLNYVDDIVA 178

Query: 256 AHIFLMENDRAQGQYIC---CVKSCPISEFIDHLKLEYPSSKMQTFE----GENQSSVPS 308
                +E        +     V    + E +D L     S   +T         +    +
Sbjct: 179 EIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYST 238

Query: 309 VISSEKLKDLGFNYKHGIEDIIC 331
            +S     D  +     ++D   
Sbjct: 239 YLSYLPSTDFSYPLLMNVDDRGS 261

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 69.3 bits (169), Expect = 6e-14
 Identities = 38/256 (14%), Positives = 71/256 (27%), Gaps = 50/256 (19%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           V GA G  GS +V     RG+ V A VRDP K              +     +     + 
Sbjct: 5   VLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA------ADRLGATVATLVKEPLVLTEA 58

Query: 76  AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT 135
            +   D V    +          +++                +L+   L++     V + 
Sbjct: 59  DLDSVDAVVDALSVPWGSGRGYLHLD-------------FATHLVSL-LRNSDTLAVFIL 104

Query: 136 SSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKI 195
            S S        G   P++ +  ++     W   A    Y    L              +
Sbjct: 105 GSASLAM----PGADHPMILDFPESAASQPWYDGALYQYYEYQFLQM---------NANV 151

Query: 196 DLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICN 255
           + + +  +        +S  +    LL    G S                  +   ++  
Sbjct: 152 NWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSH-----------------ITTGNMAL 194

Query: 256 AHIFLMENDRAQGQYI 271
           A +  +E+  A    I
Sbjct: 195 AILDQLEHPTAIRDRI 210

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 68.4 bits (167), Expect = 3e-13
 Identities = 55/348 (15%), Positives = 105/348 (30%), Gaps = 87/348 (25%)

Query: 7   STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQAD 66
           S   + T    G  GY    L + L  +G+ +  T R+P +++      R+         
Sbjct: 1   SNAMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAI----RASGAEPLLWP 55

Query: 67  LQVEGSFDKAVMGCDG-VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
            +     + ++ G    +   A     D                 P + +  + + A  +
Sbjct: 56  GE-----EPSLDGVTHLLISTAPDSGGD-----------------PVLAALGDQIAA--R 91

Query: 126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEET 185
           +   + V   S+ +     D  G W   VDE+            A G   V         
Sbjct: 92  AAQFRWVGYLSTTAVY--GDHDGAW---VDETTPLTPTA-----ARGRWRV-------MA 134

Query: 186 AFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI 245
             ++     + L       + GP                  G  +       V +R    
Sbjct: 135 EQQWQAVPNLPLHVFRLAGIYGP--------GRGPFSKLGKGGIRRIIKPGQVFSR---- 182

Query: 246 ALVHIEDICNAHIFLMENDRAQGQY-ICCVKSCPISEFIDH----LKLEYP--------- 291
             +H+EDI       M        Y +C  +  P  + I +      L  P         
Sbjct: 183 --IHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKAD 240

Query: 292 -SSKMQTFEGENQSSVPSVISSEKLK-DLGF-----NYKHGIEDIICQ 332
            +   ++F  EN+      + ++++K +LG      NY+ G+E +   
Sbjct: 241 LTPMARSFYSENK-----RVRNDRIKEELGVRLKYPNYRVGLEALQAD 283

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 69.6 bits (170), Expect = 3e-13
 Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 40/203 (19%)

Query: 7   STGRSKTFCVTGANGYIGSWLVKTLLERGYI---VHATVR---------------DPGKL 48
            +   +T  +TGA G++G +LV  LL R  +   +   VR               D G  
Sbjct: 69  PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDP 128

Query: 49  QIFSKWTR--SDRLRLFQADLQVEG------SFDKAVMGCDGVFHVAASMEFDINVKDNI 100
           ++   +    +DRL +   D            + +     D +   AA +          
Sbjct: 129 ELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFP------ 182

Query: 101 ETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT 160
             Y +    N  +  T  L++  L +  +K     S+     A + S  +    D    +
Sbjct: 183 --YHELFGPN--VAGTAELIRIALTT-KLKPFTYVSTADVGAAIEPSA-FTEDADIRVIS 236

Query: 161 PIHHVWNKKASGWVYVLSKLLSE 183
           P   V    A G  Y  SK   E
Sbjct: 237 PTRTVDGGWAGG--YGTSKWAGE 257

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 68.0 bits (167), Expect = 4e-13
 Identities = 49/276 (17%), Positives = 88/276 (31%), Gaps = 78/276 (28%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATV-----RDPGKLQIFSKWTRSDRLRLFQADLQVE 70
           VTG  G+IGS +VK L ++G      +     +D  K         +D +   + D  ++
Sbjct: 4   VTGGAGFIGSNIVKALNDKGI--TDILVVDNLKDGTKFVNLVDLNIADYMD--KEDFLIQ 59

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
               +     + +FH  A      +  +    Y+     N   Q +  LL  CL+ E   
Sbjct: 60  IMAGEEFGDVEAIFHEGAC----SSTTEWDGKYMMDN--N--YQYSKELLHYCLERE--I 109

Query: 131 RVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFA 190
             +  SS +T            +     + P++          VY  SK L +E   +  
Sbjct: 110 PFLYASSAATY----GGRTSDFIESREYEKPLN----------VYGYSKFLFDEYVRQIL 155

Query: 191 NENKIDLV-------------------SVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF 231
            E    +V                   SV         L + + +     L    G   F
Sbjct: 156 PEANSQIVGFRYFNVYGPREGHKGSMASVA------FHLNTQLNNGESPKL--FEGSENF 207

Query: 232 ---FSILSSVSNRMGSIALVHIEDICNAHIFLMEND 264
              F               V++ D+ + +++ +EN 
Sbjct: 208 KRDF---------------VYVGDVADVNLWFLENG 228

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 49/272 (18%), Positives = 76/272 (27%), Gaps = 76/272 (27%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVE 70
           K   V G  G  G  + +TLLE G + V    R+P K    +K  R     + Q D   +
Sbjct: 6   KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA--AKELRLQGAEVVQGDQDDQ 63

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
              + A+ G    F V                Y +S      ++    L     +   + 
Sbjct: 64  VIMELALNGAYATFIVT--------------NYWESCSQEQEVKQGKLLADLA-RRLGLH 108

Query: 131 RVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK-------KASG--WVYVLSKLL 181
            VV +   +    K ++G               H   K       +  G     V     
Sbjct: 109 YVVYSGLEN--IKKLTAGRL----------AAAHFDGKGEVEEYFRDIGVPMTSVR---- 152

Query: 182 SEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNR 241
                  F N             +   FL    P     LLS  TGD             
Sbjct: 153 ---LPCYFEN-------------LLSHFLPQKAPDGKSYLLSLPTGDVP----------- 185

Query: 242 MGSIALVHIEDI--CNAHIFLMENDRAQGQYI 271
              +  + + D+      +  M  ++  GQ I
Sbjct: 186 ---MDGMSVSDLGPVVLSLLKMP-EKYVGQNI 213

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 64.5 bits (158), Expect = 7e-12
 Identities = 47/279 (16%), Positives = 84/279 (30%), Gaps = 86/279 (30%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRD---PGKLQIFSKWTRSDRLRLFQADLQVEGS 72
           +TG  G +GS L++  L +G+ +   V D    GK ++         L + +  +   G 
Sbjct: 25  ITGGAGCLGSNLIEHWLPQGHEI--LVIDNFATGKREVLP---PVAGLSVIEGSVTDAGL 79

Query: 73  FDKAVMGC--DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
            ++A        V H AA+ +      D+      + V       ++N+ KA  K+  VK
Sbjct: 80  LERAFDSFKPTHVVHSAAAYK----DPDDWAEDAATNVQG-----SINVAKAASKA-GVK 129

Query: 131 RVVLTSSVSTITAKDSSGEWRPV---VDESC-QTPIHHVWNKKASGWVYVLSKLLSEE-- 184
           R++   +          G   P    +       P             Y +SK   E   
Sbjct: 130 RLLNFQTALCY------GR--PATVPIPIDSPTAPFT----------SYGISKTAGEAFL 171

Query: 185 -------TAFKFANENKIDLVSVITTTVAGPFLTSSV-PSSIQVLLS--PITGDSK---F 231
                   + + AN             V GP L     P+  + L +            F
Sbjct: 172 MMSDVPVVSLRLAN-------------VTGPRLAIGPIPTFYKRLKAGQKCFCSDTVRDF 218

Query: 232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQY 270
                           + + D        ++  R  G +
Sbjct: 219 ----------------LDMSDFLAIADLSLQEGRPTGVF 241

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 62.3 bits (151), Expect = 1e-11
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 16 VTGANGYIGSWLVKTLLER-GYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFD 74
          + GA G I   L  TLL      +    R      I  +    +R+ + +   Q  G  +
Sbjct: 10 ILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTR-IPPEIIDHERVTVIEGSFQNPGXLE 68

Query: 75 KAVMGCDGVFH 85
          +AV   + VF 
Sbjct: 69 QAVTNAEVVFV 79

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 62.9 bits (153), Expect = 3e-11
 Identities = 51/297 (17%), Positives = 100/297 (33%), Gaps = 63/297 (21%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRD---PGKLQIFSKWTRSDRLRLFQAD 66
           ++K   + G NG+IG  L K +LE                +L       + +R+  F+ D
Sbjct: 23  KAKKVLILGVNGFIGHHLSKRILETTDWE--VFGMDMQTDRL---GDLVKHERMHFFEGD 77

Query: 67  LQVEGSFDKAVMG-CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           + +   + +  +  CD +  + A       VK  +             ++ L ++++ +K
Sbjct: 78  ITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRV------FELDFEANLPIVRSAVK 131

Query: 126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEET 185
               K +V  S+ S +    +  ++ P        PI    NK    W+Y  SK L +  
Sbjct: 132 YG--KHLVFPST-SEVYGMCADEQFDPDASALTYGPI----NK--PRWIYACSKQLMDRV 182

Query: 186 AFKFANENKIDLVSVITTTVA------GPFLTSS----------VPSSIQVLLS--PIT- 226
            + +  E        +  T+       GP L S           V   +  ++    I+ 
Sbjct: 183 IWGYGMEG-------LNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISL 235

Query: 227 -GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEF 282
                          R    A  +++D  +A + ++EN              P + F
Sbjct: 236 VDGGS--------QKR----AFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNF 280

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 61.9 bits (151), Expect = 4e-11
 Identities = 49/351 (13%), Positives = 110/351 (31%), Gaps = 71/351 (20%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYI--VHATVRDPGKLQIFSKWTRSDRLRLFQADLQ 68
           +    + GA G IG+ L + L +      V A+        + +             +  
Sbjct: 2   NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSG------PFEVVNAL 55

Query: 69  VEGSFDKAV--MGCDGVFHVAASMEFDINVK--DNIETYVQSTVINPAIQSTLNLLKACL 124
                +  V       ++ +AA +    +     N         +N  + S  ++L    
Sbjct: 56  DFNQIEHLVEVHKITDIYLMAALL----SATAEKNPAFAWD---LN--MNSLFHVLNLA- 105

Query: 125 KSESVKRVVLTSSVSTI---TAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLL 181
           K++ +K++   SS++     T K+           +   P         +  VY +SK  
Sbjct: 106 KAKKIKKIFWPSSIAVFGPTTPKE------NTPQYTIMEPS--------T--VYGISKQA 149

Query: 182 SEETAFKFANENKIDLVSVITTTVAGPFL-----TSSVPSSIQVLLSPITGDSKFFSILS 236
            E     + N   +D+ S+    +          T+     I            F+  ++
Sbjct: 150 GERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDI------------FYKAIA 197

Query: 237 S---VSNRMGSIAL--VHIEDICNAHIFLMENDRAQGQYICCVKSCPIS----EFIDHLK 287
                        +  ++++D  +A I +M+    + +         +S    E  + +K
Sbjct: 198 DKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIK 257

Query: 288 LEYPSSKMQ---TFEGENQSSVPSVISSEKL-KDLGFNYKHGIEDIICQTI 334
              P   +     F  +   S P+ I   +  +D  + +   +E +    I
Sbjct: 258 KHIPEFTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMI 308

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 41/199 (20%), Positives = 65/199 (32%), Gaps = 39/199 (19%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRD------------PGKLQIFSKWTRS 57
            ++T  +TG  G++GS L     E        V D            P  L  F      
Sbjct: 9   ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGF 68

Query: 58  DRLRLFQADLQVEGSFDKAVM-GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQST 116
            +  +  AD+       +      D +FH AA    D  + +           N   Q+ 
Sbjct: 69  -KGEVIAADINNPLDLRRLEKLHFDYLFHQAAVS--DTTMLNQELV----MKTN--YQAF 119

Query: 117 LNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYV 176
           LNLL+     +   +V+  SS        +     P V    ++P +          VY 
Sbjct: 120 LNLLEIARSKK--AKVIYASSAGVYGNTKA-----PNVVGKNESPEN----------VYG 162

Query: 177 LSKLLSEETAFKFANENKI 195
            SKL  +E     +N+N  
Sbjct: 163 FSKLCMDEFVLSHSNDNVQ 181

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 25/137 (18%)

Query: 16  VTGANGYIGSWLVKTLLER--GYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSF 73
           +TGA G +G +++++L++      + A VR+P K Q  +    +  + + QAD   E + 
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----AQGITVRQADYGDEAAL 59

Query: 74  DKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVV 133
             A+ G + +  +++S                            N++ A  K+  VK + 
Sbjct: 60  TSALQGVEKLLLISSSEVGQ------------------RAPQHRNVINAA-KAAGVKFIA 100

Query: 134 LTSSVSTITAKDSSGEW 150
            TS +   T+     + 
Sbjct: 101 YTSLLHADTSPLGLADE 117

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 59.5 bits (144), Expect = 3e-10
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 26/146 (17%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLR-----LFQADLQVE 70
           + GA GYIG  + K  L+ G+     VR+        K    +  +     +    +   
Sbjct: 9   LIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDH 68

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
            S  +AV   D V                      STV +  I+S +N++KA  +  +VK
Sbjct: 69  ASLVEAVKNVDVVI---------------------STVGSLQIESQVNIIKAIKEVGTVK 107

Query: 131 RVVLTSSVSTITAKDSSGEWRPVVDE 156
           R   +   + +    +    + V + 
Sbjct: 108 RFFPSEFGNDVDNVHAVEPAKSVFEV 133

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 59.2 bits (144), Expect = 4e-10
 Identities = 22/125 (17%), Positives = 41/125 (32%), Gaps = 22/125 (17%)

Query: 16  VTGANGYIGSWLVKTLLERGYI-VHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFD 74
           +TGA G++G+ +    +       H  VR+  K+          ++ + Q D   + S  
Sbjct: 5   LTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----WRGKVSVRQLDYFNQESMV 60

Query: 75  KAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL 134
           +A  G D V  + +                        I    NL+ A  K   V  ++ 
Sbjct: 61  EAFKGMDTVVFIPSI----------------IHPSFKRIPEVENLVYAA-KQSGVAHIIF 103

Query: 135 TSSVS 139
               +
Sbjct: 104 IGYYA 108

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 58.0 bits (140), Expect = 9e-10
 Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 21/151 (13%)

Query: 6   ESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQA 65
           E  G      + G  GYIG+ +VK  L+ G+  +   R            +S    + + 
Sbjct: 6   EENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKG 65

Query: 66  DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           +L       + +   D V                      S +  P I     +L+A   
Sbjct: 66  ELDEHEKLVELMKKVDVVI---------------------SALAFPQILDQFKILEAIKV 104

Query: 126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDE 156
           + ++KR + +         ++   +  +++ 
Sbjct: 105 AGNIKRFLPSDFGVEEDRINALPPFEALIER 135

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 57.3 bits (139), Expect = 1e-09
 Identities = 24/137 (17%), Positives = 42/137 (30%), Gaps = 23/137 (16%)

Query: 16  VTGANGYIGSWLVKTLLER--GYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSF 73
           VTGA G +G  +++ LL++     + A VR+  K            + +   D     S 
Sbjct: 5   VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTL----ADQGVEVRHGDYNQPESL 60

Query: 74  DKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVV 133
            KA  G   +  ++                         I    N++KA  +   VK + 
Sbjct: 61  QKAFAGVSKLLFISGP----------------HYDNTLLIVQHANVVKAA-RDAGVKHIA 103

Query: 134 LTSSVSTITAKDSSGEW 150
            T       +       
Sbjct: 104 YTGYAFAEESIIPLAHV 120

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 57.5 bits (139), Expect = 2e-09
 Identities = 56/383 (14%), Positives = 99/383 (25%), Gaps = 91/383 (23%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVH-------------------ATVRDPGKLQIFSKWTR 56
           V G +GY G      L ++ Y V                      +          K   
Sbjct: 16  VIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT 75

Query: 57  SDRLRLFQADLQVEGSFDKAVMG-------CDGVFHVAA------SMEFDINVKDNIETY 103
              + L+  D+      D   +         D V H         SM   I+    + T 
Sbjct: 76  GKSIELYVGDIC-----DFEFLAESFKSFEPDSVVHFGEQRSAPYSM---IDRSRAVYTQ 127

Query: 104 VQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTI-TAKDSSGEWRPVVDESCQTPI 162
                 N  +  TLN+L A  +      +V   ++    T      E    +  + +T  
Sbjct: 128 ----HNN--VIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDT 181

Query: 163 HHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLL 222
                + +S   Y LSK+              I    +    V G     +     + L 
Sbjct: 182 LPYPKQASS--FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDET--EMHEELR 237

Query: 223 SPITGDSKFFSILSSVSNRMGSIALV-----------------HIEDICNAHIFLMENDR 265
           + +  D+ F + L    NR    A V                  I D        + N  
Sbjct: 238 NRLDYDAVFGTAL----NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA 293

Query: 266 AQGQY--------ICCVKSCPISEFIDHLKLEYPSSKMQTF------EGENQSSVPSVIS 311
             G++           V    ++  +     +      +        E E          
Sbjct: 294 KAGEFRVFNQFTEQFSVNE--LASLVTKAGSKLGLDVKKMTVPNPRVEAEEHY---YNAK 348

Query: 312 SEKLKDLGFNYKHGIEDIICQTI 334
             KL +LG    +  + ++   +
Sbjct: 349 HTKLMELGLEPHYLSDSLLDSLL 371

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 56.6 bits (137), Expect = 4e-09
 Identities = 36/197 (18%), Positives = 72/197 (36%), Gaps = 26/197 (13%)

Query: 15  CVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSF 73
            + G NG+IG+ L + LL    Y V     D G   I S++         + D+ +   +
Sbjct: 4   LILGVNGFIGNHLTERLLREDHYEV--YGLDIGSDAI-SRFLNHPHFHFVEGDISIHSEW 60

Query: 74  DKAVMG-CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRV 132
            +  +  CD V  + A        ++ +             +  L +++ C+K    KR+
Sbjct: 61  IEYHVKKCDVVLPLVAIATPIEYTRNPLRV------FELDFEENLRIIRYCVKYR--KRI 112

Query: 133 VLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE 192
           +  S+ S +    S   +          P++         W+Y +SK L +   + +  +
Sbjct: 113 IFPST-SEVYGMCSDKYFDEDHSNLIVGPVN------KPRWIYSVSKQLLDRVIWAYGEK 165

Query: 193 NKIDLVSVITTTVAGPF 209
             +        T+  PF
Sbjct: 166 EGLQ------FTLFRPF 176

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 55.0 bits (133), Expect = 7e-09
 Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 8  TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADL 67
          +  +K + VTGA+   G  + +  +  G  V  T R    L         DR      D+
Sbjct: 2  SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVA-AYPDRAEAISLDV 60

Query: 68 ----QVEGSFDKAV 77
              +++      +
Sbjct: 61 TDGERIDVVAADVL 74

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 55.1 bits (134), Expect = 1e-08
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 35/139 (25%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
            +  + G  GYIGS  VK L++ G  V   V D   LQ   +   ++  + +  DL+   
Sbjct: 2   NSILICGGAGYIGSHAVKKLVDEGLSV--VVVD--NLQTGHEDAITEGAKFYNGDLR--- 54

Query: 72  SFDKAVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPA------IQSTLN 118
             DKA +         + V H AA             + V  ++  P       +   L 
Sbjct: 55  --DKAFLRDVFTQENIEAVMHFAAD------------SLVGVSMEKPLQYYNNNVYGALC 100

Query: 119 LLKACLKSESVKRVVLTSS 137
           LL+   +   V + + +S+
Sbjct: 101 LLEVMDEF-KVDKFIFSST 118

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 29/148 (19%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVR-------DPGKLQIFSKWTRSDRLRLFQADLQ 68
           + G  G IG  +V   ++ G   +A VR          K ++   + +S  + L + D+ 
Sbjct: 7   ILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNY-QSLGVILLEGDIN 65

Query: 69  VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
              +  KA+   D V                             I+  + ++KA  ++ +
Sbjct: 66  DHETLVKAIKQVDIVI---------------------CAAGRLLIEDQVKIIKAIKEAGN 104

Query: 129 VKRVVLTSSVSTITAKDSSGEWRPVVDE 156
           VK+   +     +   D+    R V +E
Sbjct: 105 VKKFFPSEFGLDVDRHDAVEPVRQVFEE 132

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 31/139 (22%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATV--RDPGKLQIFSKWTRSDRLRLFQADLQV 69
           +T  +TG  G  G   V+ +L+        V  RD  K    +      R+R F  D++ 
Sbjct: 22  QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD 81

Query: 70  EGSFDKAVMGCDGVFHVAA-----SMEFDINVKDNIETYVQSTVINP--AIQS----TLN 118
               + A+ G D   H AA       E+                 NP   I++      N
Sbjct: 82  LERLNYALEGVDICIHAAALKHVPIAEY-----------------NPLECIKTNIMGASN 124

Query: 119 LLKACLKSESVKRVVLTSS 137
           ++ ACLK+  + +V+  S+
Sbjct: 125 VINACLKNA-ISQVIALST 142

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 53.4 bits (128), Expect = 4e-08
 Identities = 19/126 (15%), Positives = 41/126 (32%), Gaps = 26/126 (20%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLR-----LFQADLQVE 70
           + G  GYIG ++V+  L   +      R        S     +  R     + + +++  
Sbjct: 9   IYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEH 68

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
                 +   D V                      S +  P I S ++++ A   + ++K
Sbjct: 69  EKMVSVLKQVDIVI---------------------SALPFPMISSQIHIINAIKAAGNIK 107

Query: 131 RVVLTS 136
           R + + 
Sbjct: 108 RFLPSD 113

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 53.0 bits (127), Expect = 4e-08
 Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 23/126 (18%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLR-----LFQADLQVE 70
           + G  GYIG  +V   +  G+  +   R P  +    K       +     L +A L   
Sbjct: 9   IVGGTGYIGKRIVNASISLGHPTYVLFR-PEVVSNIDKVQMLLYFKQLGAKLIEASLDDH 67

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
                A+   D V    A      ++ + +                  L++A  ++ ++K
Sbjct: 68  QRLVDALKQVDVVISALAGGVLSHHILEQL-----------------KLVEAIKEAGNIK 110

Query: 131 RVVLTS 136
           R + + 
Sbjct: 111 RFLPSE 116

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 53.1 bits (127), Expect = 4e-08
 Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 24/145 (16%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVR----DPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           + GA G+IG ++    L+     +   R     P K +IF          +    +  + 
Sbjct: 15  IAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKAL-EDKGAIIVYGLINEQE 73

Query: 72  SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR 131
           + +K +   +                      V STV   +I   + L+KA     ++KR
Sbjct: 74  AMEKILKEHEIDI-------------------VVSTVGGESILDQIALVKAMKAVGTIKR 114

Query: 132 VVLTSSVSTITAKDSSGEWRPVVDE 156
            + +     +   D       +  E
Sbjct: 115 FLPSEFGHDVNRADPVEPGLNMYRE 139

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 48.7 bits (117), Expect = 1e-06
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 10/75 (13%)

Query: 16 VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
          +TG  G++G +L   L E+   V  T R+           +   + +   D+       K
Sbjct: 17 ITGVAGFVGKYLANHLTEQNVEVFGTSRNNE--------AKLPNVEMISLDIMDSQRVKK 68

Query: 76 AVMGC--DGVFHVAA 88
           +     D +FH+AA
Sbjct: 69 VISDIKPDYIFHLAA 83

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 9/125 (7%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDP-GKLQIFSKWTRSDRLRLFQADLQVEGSFD 74
           VTG  G+ G WL   L   G  V            +F     +D ++    D++ +    
Sbjct: 14  VTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLL 73

Query: 75  KAVMGC--DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRV 132
           +++     + VFH+AA     ++  + +ETY      +  +  T+ LL+A      VK V
Sbjct: 74  ESIREFQPEIVFHMAAQPLVRLSYSEPVETY------STNVMGTVYLLEAIRHVGGVKAV 127

Query: 133 VLTSS 137
           V  +S
Sbjct: 128 VNITS 132

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 22/131 (16%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRD---PGKLQIFSKWTRSDRLRLFQADLQ 68
           K   +TG  G++GS L   L+  G+ V  TV D    G+ +    W   +   L   D+ 
Sbjct: 28  KRILITGGAGFVGSHLTDKLMMDGHEV--TVVDNFFTGRKRNVEHWIGHENFELINHDVV 85

Query: 69  VEGSFDKAVMGCDGVFHVA--ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS 126
                +   +  D ++H+A  AS        + +   +++   N     TLN+L    + 
Sbjct: 86  -----EPLYIEVDQIYHLASPAS------PPNYMYNPIKTLKTN--TIGTLNMLGLAKRV 132

Query: 127 ESVKRVVLTSS 137
               R++L S+
Sbjct: 133 G--ARLLLAST 141

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 18/137 (13%)

Query: 5   EESTGRSKTFCVTGANGYIGSWLVKTLLERGYI--VHATVRDPGKLQIFSKWTRSDRLRL 62
           E+   ++K+  + GA+G  G  L+K +LE+G    V    R                +  
Sbjct: 12  EDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD----EEAYKNVNQ 67

Query: 63  FQADLQVEGSFDKAVMGCDGVFH-VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLK 121
              D +    +  A  G D  F  +  +       K   E +V+           L   +
Sbjct: 68  EVVDFEKLDDYASAFQGHDVGFCCLGTTRG-----KAGAEGFVRVDR-----DYVLKSAE 117

Query: 122 ACLKSESVKRVVLTSSV 138
              K+   K   L SS 
Sbjct: 118 LA-KAGGCKHFNLLSSK 133

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWT-------RSDRLRLF 63
           K   +TGA+   G    + L   G+ V+A++RD       +              LR  
Sbjct: 5  KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTL 64

Query: 64 QADLQVEGSFDKAV 77
          + D+Q + S D+A+
Sbjct: 65 ELDVQSQVSVDRAI 78

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 31/166 (18%)

Query: 12  KTFCVTGANGYIGSWLVKTLL---ERGYIVHATVRDPGK---LQIFSKWTRSDRLRLFQA 65
            +  +TG N  +G  LVK LL   +    +  T R+  +   L+  +K      + + + 
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK--NHSNIHILEI 79

Query: 66  DLQVEGSFDKAV---------MGCDGVFHVAASMEFDINVKD-NIETYVQSTVIN---P- 111
           DL+   ++DK V          G + +F+ A        +     +  + +   N   P 
Sbjct: 80  DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI 139

Query: 112 -AIQSTLNLLKACLKSESVKR--------VVLTSSVSTITAKDSSG 148
              ++ L LLK   K+   +         + ++S + +I      G
Sbjct: 140 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGG 185

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 46.2 bits (110), Expect = 6e-06
 Identities = 38/168 (22%), Positives = 60/168 (35%), Gaps = 26/168 (15%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQ 68
             +  VTGAN  IG  LV+ L++      + AT RD  K        +  R+ +    + 
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-IKDSRVHVLPLTVT 61

Query: 69  VEGSFDKAV---------MGCDGVFHVAA-SMEFDINVKDNIETYVQSTVIN---PA--I 113
            + S D  V          G   + + A   + +  N + N     +   +N        
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 114 QSTLNLLKA-------CLKSESVKRVV-LTSSVSTITAKDSSGEWRPV 153
           Q  L LLK           S S   V+ ++S + +IT   S     PV
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPV 169

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 46.6 bits (111), Expect = 8e-06
 Identities = 42/214 (19%), Positives = 80/214 (37%), Gaps = 36/214 (16%)

Query: 3   KPEESTGRSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLR 61
           +P  +  R     + G NG+IG+ L + LL    Y V+    D G   I S++       
Sbjct: 307 QPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGL--DIGSDAI-SRFLNHPHFH 363

Query: 62  LFQADLQVEGSFDKAVMG-CDGVFHVAASMEFDINVKDNIET---YVQS--TVINPAIQS 115
             + D+ +   + +  +  CD V  + A           I T   Y ++   V     + 
Sbjct: 364 FVEGDISIHSEWIEYHVKKCDVVLPLVA-----------IATPIEYTRNPLRVFELDFEE 412

Query: 116 TLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVY 175
            L +++ C+K    KR++  S+ S +    S   +          P++         W+Y
Sbjct: 413 NLRIIRYCVKYR--KRIIFPST-SEVYGMCSDKYFDEDHSNLIVGPVNK------PRWIY 463

Query: 176 VLSKLLSEETAFKFANENKIDLVSVITTTVAGPF 209
            +SK L +   + +  +  +        T+  PF
Sbjct: 464 SVSKQLLDRVIWAYGEKEGLQ------FTLFRPF 491

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 28/156 (17%), Positives = 46/156 (29%), Gaps = 52/156 (33%)

Query: 16  VTGANGYIGSWLVKTLL-ERGYIV-------------------HATVRDPGKLQIFSKWT 55
           V G  GYIGS  V+ LL +  + V                       R   +        
Sbjct: 7   VCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPW 66

Query: 56  RSDRLRLFQADLQVEGSFDKAVM--------GCDGVFHVAASMEFDINVKDNIETYVQST 107
                 L   D++     ++  +          D V H+ A               V  +
Sbjct: 67  ADRYAALEVGDVR-----NEDFLNGVFTRHGPIDAVVHMCAF------------LAVGES 109

Query: 108 VINPA------IQSTLNLLKACLKSESVKRVVLTSS 137
           V +P       +   L LL+A L      +++ +SS
Sbjct: 110 VRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSS 144

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 43.9 bits (104), Expect = 5e-05
 Identities = 39/162 (24%), Positives = 54/162 (33%), Gaps = 52/162 (32%)

Query: 1   MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIF--SKWTRSD 58
           M    +S   SK   VTG  GYIGS  V  L+E GY     V D         S +    
Sbjct: 1   MTAQLQSESTSKIVLVTGGAGYIGSHTVVELIENGYDC--VVAD-----NLSNSTYDSVA 53

Query: 59  RLR--------LFQADL----QVEGSFDKAVMGCDGVFHVAA------SME-----FDIN 95
           RL          ++ DL     +E  F +     D V H A       S +     +  N
Sbjct: 54  RLEVLTKHHIPFYEVDLCDRKGLEKVFKEY--KIDSVIHFAGLKAVGESTQIPLRYYHNN 111

Query: 96  VKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS 137
           +                   T+ LL+   +   V + V +SS
Sbjct: 112 I-----------------LGTVVLLELMQQYN-VSKFVFSSS 135

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 42.8 bits (101), Expect = 9e-05
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 8/74 (10%)

Query: 12 KTFCVTGANGYIGSWLVKTLLE---RGYIVHATVRDPGKLQIF-----SKWTRSDRLRLF 63
              +TG +  IG  L   L     + + V+AT+RD            +       L   
Sbjct: 3  TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 64 QADLQVEGSFDKAV 77
          Q D++   S   A 
Sbjct: 63 QLDVRDSKSVAAAR 76

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 29/143 (20%), Positives = 47/143 (32%), Gaps = 33/143 (23%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRD----PGKLQIFSKWTRSDRLRLFQADL 67
               +TG  G++GS L    L +G  +   V D     G        +          D+
Sbjct: 2   AKLLITGGCGFLGSNLASFALSQGIDL--IVFDNLSRKGATDNLHWLSSLGNFEFVHGDI 59

Query: 68  ----QVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPA------IQSTL 117
                V     K     D  FH+A             +  + +++ NP       +  TL
Sbjct: 60  RNKNDVTRLITKY--MPDSCFHLAG------------QVAMTTSIDNPCMDFEINVGGTL 105

Query: 118 NLLKACLKSESVKRVVLTSSVST 140
           NLL+A  +  S   ++     ST
Sbjct: 106 NLLEAVRQYNSNCNIIY---SST 125

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 14/72 (19%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           +TG+ G +G  L   L   G+ V   VR   K      W              +  + D 
Sbjct: 152 ITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRF-WD------------PLNPASD- 197

Query: 76  AVMGCDGVFHVA 87
            + G D + H+A
Sbjct: 198 LLDGADVLVHLA 209

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 41/293 (13%), Positives = 99/293 (33%), Gaps = 68/293 (23%)

Query: 85  HVAASMEFDINV-----KDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS 139
           H    M+F+        KD +  +  + V N   +   ++ K+ L  E +  ++++    
Sbjct: 2   HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61

Query: 140 --------TITAKDSSGEWRPVVDESCQ-------TPIHHVWNKKA---SGWVYVLSKLL 181
                   T+ +K      +  V+E  +       +PI     + +     ++    +L 
Sbjct: 62  SGTLRLFWTLLSKQEEMVQK-FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 182 SEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNR 241
           ++   F   N +++     +        L    P+   VL+  + G  K  + ++     
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQA-----LLELRPAKN-VLIDGVLGSGK--TWVAL---- 168

Query: 242 MGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISE-FIDHL-KLEYPSSKMQTFE 299
                     D+C ++    + D     +   +K+C   E  ++ L KL Y      T  
Sbjct: 169 ----------DVCLSYKVQCKMDF--KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216

Query: 300 GENQSSVPSVISSEKLKDLGF----NYKHG------------IE--DIICQTI 334
            ++ S++   I S + +         Y++                 ++ C+ +
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL 269

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 41.3 bits (98), Expect = 3e-04
 Identities = 36/139 (25%), Positives = 53/139 (38%), Gaps = 30/139 (21%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVR----DP----GKLQIFSKWTRSDRLRLFQADL 67
           VTG  G+IGS  V+ LL   Y           D     G     +      RLR    D+
Sbjct: 5   VTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDI 64

Query: 68  QVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPA------IQSTLNLLK 121
           +  G   + + G D + H AA            E++V  ++   +      +Q T  LL+
Sbjct: 65  RDAGLLARELRGVDAIVHFAA------------ESHVDRSIAGASVFTETNVQGTQTLLQ 112

Query: 122 ACLKSESVKRVVLTSSVST 140
             + +  V RVV    VST
Sbjct: 113 CAVDAG-VGRVV---HVST 127

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 41.3 bits (98), Expect = 3e-04
 Identities = 34/153 (22%), Positives = 52/153 (33%), Gaps = 48/153 (31%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP---GKLQIFSKWTRSDRLR------ 61
           ++   VTG  GYIGS  V  LLE GY+    V D          S      R++      
Sbjct: 2   AEKVLVTGGAGYIGSHTVLELLEAGYLP--VVIDNFHNAFRGGGSLPESLRRVQELTGRS 59

Query: 62  --LFQADL----QVEGSFDKAVMGCDGVFHVAA------SME-----FDINVKDNIETYV 104
               + D+     ++  F K       V H A       S++     + +N+        
Sbjct: 60  VEFEEMDILDQGALQRLFKKY--SFMAVIHFAGLKAVGESVQKPLDYYRVNL-------- 109

Query: 105 QSTVINPAIQSTLNLLKACLKSESVKRVVLTSS 137
                      T+ LL+       VK +V +SS
Sbjct: 110 ---------TGTIQLLEIMKAHG-VKNLVFSSS 132

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 19/130 (14%), Positives = 36/130 (27%), Gaps = 21/130 (16%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYI--VHATVRDPGKLQIFSKWTRSDRLRLFQADLQ 68
            K   + GA G  G  L+  +L    +  V A  R             ++  RL      
Sbjct: 5   PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL----------AEHPRLDNPVGP 54

Query: 69  VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
           +     +     D  F    +    I    + E +             L + K       
Sbjct: 55  LAELLPQLDGSIDTAFCCLGTT---IKEAGSEEAFRAVDF-----DLPLAVGKRA-LEMG 105

Query: 129 VKRVVLTSSV 138
            +  ++ S++
Sbjct: 106 ARHYLVVSAL 115

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 39.9 bits (93), Expect = 7e-04
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 1  MEKPEESTG-RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ 49
          M +   +T  + +   VTG N  IG  + K L   G +V  T RD  K  
Sbjct: 1  MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGH 50

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	348
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.98
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.98
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.98
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.97
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.97
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.97
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.96
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.96
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.96
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.96
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.96
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.94
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.94
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.94
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.94
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.94
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.94
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.94
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.94
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.94
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.94
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.94
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.94
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.94
1spx_A	278	Short-chain reductase family member (5L265); paral	99.94
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.94
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.94
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.93
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.93
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.93
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.93
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.93
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.93
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.93
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.93
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.93
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.93
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.93
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.93
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.93
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.93
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.93
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.93
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.93
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.93
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.93
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.93
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.93
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.93
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.93
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.92
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.92
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.92
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.92
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.92
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.92
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.92
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.92
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.92
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.92
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.92
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.92
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.92
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.92
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.92
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.92
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.92
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.92
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.92
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.92
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.92
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.92
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.92
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.92
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.92
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.92
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.92
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.92
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.92
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.92
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.92
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.92
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.92
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.92
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.92
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.92
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.92
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.92
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.92
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.92
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.92
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.92
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.92
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.92
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.92
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.92
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.91
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.91
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.91
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.91
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.91
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.91
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.91
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.91
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.91
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.91
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.91
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.91
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.91
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.91
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.91
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.91
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.91
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.91
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.91
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.91
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.91
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.91
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.91
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.91
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.91
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.91
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.91
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.91
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.91
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.91
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.91
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.91
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.91
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.91
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.91
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.91
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.91
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.91
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.91
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.91
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.9
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.9
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.9
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.9
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.9
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.9
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.9
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.9
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.9
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.9
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.9
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.9
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.9
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.9
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.9
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.9
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.9
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.9
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.9
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.9
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.9
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.9
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.9
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.9
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.9
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.9
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.9
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.9
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.9
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.9
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.9
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.9
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.9
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.9
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.9
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.89
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.89
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.89
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.89
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.89
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.89
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.89
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.89
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.89
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.89
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.89
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.89
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.89
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.89
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.89
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.89
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.88
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.88
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.88
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.88
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.88
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.88
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.88
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.88
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.88
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.87
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.87
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.87
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.87
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.87
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.87
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.87
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.87
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.86
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.86
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.85
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.84
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.84
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.84
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.83
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.83
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.83
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.82
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.82
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.82
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.82
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.81
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.78
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.77
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.76
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.73
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.73
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.71
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.63
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.62
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.59
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.57
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.57
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.55
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.54
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.51
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.46
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.34
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.33
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.31
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.22
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.19
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	99.02
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.01
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.94
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.91
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.89
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.8
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.78
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.73
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.71
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.7
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.64
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.59
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.57
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.54
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.53
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.51
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.46
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.46
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.4
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.4
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.35
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.28
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.27
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.24
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.16
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.13
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	98.09
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	98.06
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	98.04
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.99
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.99
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.95
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.94
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.93
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.92
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.9
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.87
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.86
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.86
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.86
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.82
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.82
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.8
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.8
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.79
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.78
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.78
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.77
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.75
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.74
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.72
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.7
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.7
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.69
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.66
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.66
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.65
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.63
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.62
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.59
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.59
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.55
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.55
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.54
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.54
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.53
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.53
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.52
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.51
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.5
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.5
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.49
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.48
1lnq_A	336	MTHK channels, potassium channel related protein;	97.47
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.46
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.46
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.41
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.41
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.4
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.38
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.37
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.37
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.37
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.37
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.34
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.34
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.32
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.31
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.29
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.29
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.28
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.26
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.23
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.23
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.22
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.22
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.22
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.22
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.21
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.2
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.18
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.18
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.16
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	97.16
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.13
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.11
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.11
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.11
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.09
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.07
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.07
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.07
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.05
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.05
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	97.05
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.04
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	97.03
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.03
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.02
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.01
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.0
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.97
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.97
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.95
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.94
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.94
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.94
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.92
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.9
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.89
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.87
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	96.87
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.86
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	96.86
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.83
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	96.82
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.8
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	96.79
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.79
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.78
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	96.77
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.77
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.77
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.76
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.76
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.76
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.75
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.75
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.74
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.74
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.73
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	96.73
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.72
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.71
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.71
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.71
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.71
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.71
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.7
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.69
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	96.69
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.68
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.67
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.65
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.64
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.64
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.63
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.62
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.61
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.6
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.59
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.59
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	96.55
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.55
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.55
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.54
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.54
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.51
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.5
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	96.5
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.5
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	96.49

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=5.9e-48  Score=349.96  Aligned_cols=306  Identities=14%  Similarity=0.163  Sum_probs=237.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhcC--CCE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDG   82 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~   82 (348)
                      +++|+|||||||||||++|+++|+++|  ++|++++|.....  .........++++++.+|++|.+++.+++++  +|+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  101 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV  101 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence            456899999999999999999999999  7888888865322  1111111235899999999999999999986  999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI  162 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~  162 (348)
                      |||+|+.........+     + ..++++|+.++.+++++|++.+ +++|||+||.++|+....    ..+++|+++.. 
T Consensus       102 Vih~A~~~~~~~~~~~-----~-~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~~----~~~~~E~~~~~-  169 (346)
T 4egb_A          102 IVNFAAESHVDRSIEN-----P-IPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLGK----TGRFTEETPLA-  169 (346)
T ss_dssp             EEECCCCC---------------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCCS----SCCBCTTSCCC-
T ss_pred             EEECCcccchhhhhhC-----H-HHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCCc----CCCcCCCCCCC-
Confidence            9999998765433333     3 3789999999999999999998 899999999987766543    35888888654 


Q ss_pred             chhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCccccccccccC
Q 035965          163 HHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSILSSVSNR  241 (348)
Q Consensus       163 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  241 (348)
                              |.+.|+.+|.++|.+++.++++++++++++||++||||+....  ..+. ++.....+....+  .+   .+
T Consensus       170 --------p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~--~~---~~  234 (346)
T 4egb_A          170 --------PNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE--KLIPLMVTNALEGKKLPL--YG---DG  234 (346)
T ss_dssp             --------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT--SHHHHHHHHHHTTCCCEE--ET---TS
T ss_pred             --------CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc--chHHHHHHHHHcCCCcee--eC---CC
Confidence                    7789999999999999999998899999999999999987643  2333 3444555554333  22   34


Q ss_pred             CCCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccChHHHH-H
Q 035965          242 MGSIALVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISSEKLK-D  317 (348)
Q Consensus       242 ~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~  317 (348)
                      .+.++|||++|+|++++.+++++..+++||+++ +.+|+.|+++.+.+.+|.....+......+  .....+|++|++ +
T Consensus       235 ~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  314 (346)
T 4egb_A          235 LNVRDWLHVTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNE  314 (346)
T ss_dssp             CCEECEEEHHHHHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHH
T ss_pred             CeEEeeEEHHHHHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHH
Confidence            478999999999999999999887777898865 589999999999999987322122211111  456778999999 8


Q ss_pred             cCCccccChhHHHHHHHHHHHHcC
Q 035965          318 LGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       318 LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      |||+|+++++|+|+++++|++++.
T Consensus       315 lG~~p~~~~~e~l~~~~~~~~~~~  338 (346)
T 4egb_A          315 FDWEPKYTFEQGLQETVQWYEKNE  338 (346)
T ss_dssp             HCCCCCCCHHHHHHHHHHHHHHCH
T ss_pred             cCCCCCCCHHHHHHHHHHHHHhhh
Confidence            999999999999999999998753

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=2.3e-47  Score=341.08  Aligned_cols=293  Identities=16%  Similarity=0.188  Sum_probs=235.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      |+|+|||||||||||++|+++|+++|++|++++|++....   +    ++++++.+|++ .+++.++++++|+|||+|+.
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~----~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~   72 (311)
T 3m2p_A            1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA---I----NDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT   72 (311)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------------CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc---C----CceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence            4689999999999999999999999999999999833222   1    27899999999 99999999999999999997


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      .....         +. ..+++|+.++.+++++|++.+ +++|||+||.++|+....     .+++|+++..        
T Consensus        73 ~~~~~---------~~-~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~~~-----~~~~E~~~~~--------  128 (311)
T 3m2p_A           73 RGSQG---------KI-SEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDETS-----LPWNEKELPL--------  128 (311)
T ss_dssp             CCSSS---------CG-GGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCGGG-----CSBCTTSCCC--------
T ss_pred             CCCCC---------hH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCC-----CCCCCCCCCC--------
Confidence            65542         43 788999999999999999998 899999999987665433     5788888654        


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCccccccccccCCCCccee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                       |.+.|+.+|.++|.+++.++++.+++++++||++||||+....  ..+. ++.....+....+  .+   .+++.++|+
T Consensus       129 -p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~--~g---~~~~~~~~v  200 (311)
T 3m2p_A          129 -PDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN--YMINRFFRQAFHGEQLTL--HA---NSVAKREFL  200 (311)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C--CHHHHHHHHHHTCCCEEE--SS---BCCCCEEEE
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC--CHHHHHHHHHHcCCCeEE--ec---CCCeEEceE
Confidence             7789999999999999999998999999999999999987653  2333 3344445544332  22   344789999


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCC-C--CCCccccChHHHH-HcCCccc
Q 035965          249 HIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGEN-Q--SSVPSVISSEKLK-DLGFNYK  323 (348)
Q Consensus       249 ~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~-~LG~~p~  323 (348)
                      |++|+|++++.+++++..++.||++ ++.+|+.|+++.+.+.+|. +.+....+. .  ......+|++|++ .|||+|+
T Consensus       201 ~v~Dva~a~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~  279 (311)
T 3m2p_A          201 YAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGN-KDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTD  279 (311)
T ss_dssp             EHHHHHHHHHHHTTCTTCCEEEEECCSCEECHHHHHHHHHHHTTC-TTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCS
T ss_pred             EHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhCC-CCcceecCCCCCCCcCceecCHHHHHHHhCCCcc
Confidence            9999999999999998777889875 5699999999999999987 333322221 1  1567889999999 6999999


Q ss_pred             cChhHHHHHHHHHHHHcCCC
Q 035965          324 HGIEDIICQTIASCVDCGFL  343 (348)
Q Consensus       324 ~~~~e~l~~~~~~~~~~~~~  343 (348)
                      ++++|+|+++++|+++.+..
T Consensus       280 ~~~~~~l~~~~~~~~~~~~~  299 (311)
T 3m2p_A          280 YNFATAVEEIHLLMRGLDDV  299 (311)
T ss_dssp             CCHHHHHHHHHHHHCC----
T ss_pred             cCHHHHHHHHHHHHHhcccC
Confidence            99999999999999887664

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=7.1e-48  Score=348.21  Aligned_cols=320  Identities=44%  Similarity=0.800  Sum_probs=239.7

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc---cccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF---SKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ++++||||||+||||++|+++|+++|++|++++|+.... ...   .+....++++++.+|++|.+++.++++++|+|||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   83 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH   83 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            568999999999999999999999999999999986532 111   1110012588999999999999999999999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +|+.....  ..+     +...++++|+.++.+++++|.+.+.+++|||+||.+++++....   ..+++|+.+.+.+..
T Consensus        84 ~A~~~~~~--~~~-----~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~---~~~~~E~~~~~~~~~  153 (337)
T 2c29_D           84 VATPMDFE--SKD-----PENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ---LPVYDESCWSDMEFC  153 (337)
T ss_dssp             CCCCCCSS--CSS-----HHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSC---CSEECTTCCCCHHHH
T ss_pred             eccccCCC--CCC-----hHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCC---CcccCcccCCchhhh
Confidence            99865221  122     33368899999999999999887657899999999866654331   246788876654432


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                      .+...+.+.|+.||.++|.+++.++++++++++++||++||||+.....+..+......+.|....+.   ..    ..+
T Consensus       154 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~---~~----~~~  226 (337)
T 2c29_D          154 RAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYS---II----RQG  226 (337)
T ss_dssp             HHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHH---HH----TEE
T ss_pred             cccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcccc---cc----CCC
Confidence            22233566899999999999999887779999999999999998655433332222122334332111   11    123


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCCC-CCccccChHHHHHcCCcccc
Q 035965          246 ALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQS-SVPSVISSEKLKDLGFNYKH  324 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~LG~~p~~  324 (348)
                      .|+|++|+|++++.+++++..++.|+++++.+|+.|+++.+.+.++...+|....+... .....+|++|+++|||+|++
T Consensus       227 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~  306 (337)
T 2c29_D          227 QFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKY  306 (337)
T ss_dssp             EEEEHHHHHHHHHHHHHCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCCSCCTTCCTTCCCCEECCHHHHHHTCCCCC
T ss_pred             CEEEHHHHHHHHHHHhcCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCcccCCCccccccHHHHHHcCCCcCC
Confidence            49999999999999998876677898887789999999999998865455543333221 34577899999999999999


Q ss_pred             ChhHHHHHHHHHHHHcCCCCCC
Q 035965          325 GIEDIICQTIASCVDCGFLPPI  346 (348)
Q Consensus       325 ~~~e~l~~~~~~~~~~~~~~~~  346 (348)
                      +++|+|+++++|+++.+.++.+
T Consensus       307 ~l~e~l~~~~~~~~~~~~~~~~  328 (337)
T 2c29_D          307 SLEDMFTGAVDTCRAKGLLPPS  328 (337)
T ss_dssp             CHHHHHHHHHHHHHHTTSSCSC
T ss_pred             CHHHHHHHHHHHHHHcCCCCcc
Confidence            9999999999999999987654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=3.2e-48  Score=352.38  Aligned_cols=306  Identities=18%  Similarity=0.138  Sum_probs=240.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCC-----CCCeEEEEccCCCcchHHHhhcCCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTR-----SDRLRLFQADLQVEGSFDKAVMGCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~d   81 (348)
                      +++|+|||||||||||++|+++|+++|++|++++|+....  ........     .++++++.+|++|.+++.++++++|
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  102 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD  102 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence            4678999999999999999999999999999999976533  11111000     0479999999999999999999999


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTP  161 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~  161 (348)
                      +|||+|+.........+     + ..++++|+.++.+++++|++.+ +++|||+||.++|+....     .+++|+++..
T Consensus       103 ~Vih~A~~~~~~~~~~~-----~-~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~-----~~~~E~~~~~  170 (351)
T 3ruf_A          103 HVLHQAALGSVPRSIVD-----P-ITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDHPA-----LPKVEENIGN  170 (351)
T ss_dssp             EEEECCCCCCHHHHHHC-----H-HHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCC-----SSBCTTCCCC
T ss_pred             EEEECCccCCcchhhhC-----H-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCCCC-----CCCccCCCCC
Confidence            99999997554332233     3 3789999999999999999998 899999999987654433     5888888754


Q ss_pred             cchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCC--chHH-HHHhhhcCCCCcccccccc
Q 035965          162 IHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVP--SSIQ-VLLSPITGDSKFFSILSSV  238 (348)
Q Consensus       162 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~  238 (348)
                               |.+.|+.+|.++|.+++.++++++++++++||++||||+......  ..+. ++.....+....+.  +  
T Consensus       171 ---------p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g--  237 (351)
T 3ruf_A          171 ---------PLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYIN--G--  237 (351)
T ss_dssp             ---------CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEE--S--
T ss_pred             ---------CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEe--C--
Confidence                     778999999999999999998889999999999999998765311  2333 34445556543332  3  


Q ss_pred             ccCCCCcceeeHHHHHHHHHHhhcC--CCCCceEEEe-ccCcChHHHHHHHHHhCCCCCC----CcccCCCCC--CCccc
Q 035965          239 SNRMGSIALVHIEDICNAHIFLMEN--DRAQGQYICC-VKSCPISEFIDHLKLEYPSSKM----QTFEGENQS--SVPSV  309 (348)
Q Consensus       239 ~~~~~~r~~i~v~D~a~~~~~~~~~--~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~----~~~~~~~~~--~~~~~  309 (348)
                       .+.+.++|||++|+|++++.++.+  ...++.||++ ++.+|+.|+++.+.+.+|....    +.......+  .....
T Consensus       238 -~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  316 (351)
T 3ruf_A          238 -DGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQ  316 (351)
T ss_dssp             -SSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCC
T ss_pred             -CCCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceee
Confidence             334789999999999999999987  3346789875 5699999999999999886221    111111111  45678


Q ss_pred             cChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          310 ISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       310 ~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      +|++|++ +|||+|+++++++|+++++|++++
T Consensus       317 ~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  348 (351)
T 3ruf_A          317 ADVTKAIDLLKYRPNIKIREGLRLSMPWYVRF  348 (351)
T ss_dssp             BCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             eCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            9999999 799999999999999999999864

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=2.5e-48  Score=351.32  Aligned_cols=326  Identities=42%  Similarity=0.676  Sum_probs=233.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc---ccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI---FSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      |+|+|||||||||||++|+++|+++||+|++++|+..+. ..   ..+. ..++++++.+|++|.+++.++++++|+|||
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih   86 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGCDFVFH   86 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence            468999999999999999999999999999999976532 11   1111 124688999999999999999999999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +|+......  .+     +...++++|+.++.+++++|.+.+.+++|||+||.+++++...... ..+++|+++.+.++.
T Consensus        87 ~A~~~~~~~--~~-----~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~-~~~~~E~~~~~~~~~  158 (338)
T 2rh8_A           87 VATPVHFAS--ED-----PENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGT-GLVVDEKNWTDIEFL  158 (338)
T ss_dssp             ESSCCCC----------------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCS-CCCCCTTTTTCC---
T ss_pred             eCCccCCCC--CC-----cHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCC-CcccChhhccchhhc
Confidence            998653211  22     3235899999999999999998744789999999875554321110 136788876554332


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                      .+..++.+.|+.||.++|.+++.++++++++++++||++||||+.....+..+..+...+.+....+........+.+.+
T Consensus       159 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  238 (338)
T 2rh8_A          159 TSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSV  238 (338)
T ss_dssp             ----CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSE
T ss_pred             cccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcc
Confidence            22222334699999999999999887779999999999999998765444333333333444332121000000011234


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCCCCCccccChHHHHHcCCccccC
Q 035965          246 ALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLKDLGFNYKHG  325 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~  325 (348)
                      +|+|++|+|++++.+++++..++.|+++++.+|+.|+++.+.+.++...+|....+........+|++|+++|||+|+++
T Consensus       239 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~  318 (338)
T 2rh8_A          239 SIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPPKSKLIISSEKLVKEGFSFKYG  318 (338)
T ss_dssp             EEEEHHHHHHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCCCCCTTSCSSCSCCCCCHHHHHHTCCCSCC
T ss_pred             cEEEHHHHHHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCCcCcceeechHHHHHhCCCCCCC
Confidence            79999999999999998876677899887789999999999998875455543333221223788999999999999999


Q ss_pred             hhHHHHHHHHHHHHcCCCC
Q 035965          326 IEDIICQTIASCVDCGFLP  344 (348)
Q Consensus       326 ~~e~l~~~~~~~~~~~~~~  344 (348)
                      ++|+|+++++|+++.+.++
T Consensus       319 l~~gl~~~~~~~~~~~~~~  337 (338)
T 2rh8_A          319 IEEIYDESVEYFKAKGLLQ  337 (338)
T ss_dssp             HHHHHHHHHHHHHHTTCC-
T ss_pred             HHHHHHHHHHHHHHcCCCC
Confidence            9999999999999988764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-47  Score=345.42  Aligned_cols=310  Identities=16%  Similarity=0.173  Sum_probs=243.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-cc-CCCCCeEEEEccCCCcchHHHhhc--CCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KW-TRSDRLRLFQADLQVEGSFDKAVM--GCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vi   84 (348)
                      ++|+|||||||||||++|+++|+++|++|++++|+..+. .... .. ....+++++.+|++|.+++.++++  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            467999999999999999999999999999999976543 1111 00 012478999999999999999988  899999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      |+|+..........     + ...++.|+.++.++++++++.+ +++|||+||.++|+.. .    ..+++|+.+..   
T Consensus        84 h~A~~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~-~----~~~~~e~~~~~---  148 (341)
T 3enk_A           84 HFAALKAVGESVAK-----P-IEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVP-E----RSPIDETFPLS---  148 (341)
T ss_dssp             ECCCCCCHHHHHHC-----H-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSC-S----SSSBCTTSCCB---
T ss_pred             ECccccccCccccC-----h-HHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCC-C----CCCCCCCCCCC---
Confidence            99997654332233     3 3788999999999999999988 8899999999866443 3    35788887654   


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhCC-CcEEEEecCccccCCCCC------C--CCchHHHHHhhhcCCCCccccc
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANENK-IDLVSVITTTVAGPFLTS------S--VPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~lR~~~v~G~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                            |.+.|+.+|.++|.+++.++++.+ ++++++||++||||+...      .  ...++..+.+...+....+...
T Consensus       149 ------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (341)
T 3enk_A          149 ------ATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVF  222 (341)
T ss_dssp             ------CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEE
T ss_pred             ------CCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEe
Confidence                  678899999999999999998876 999999999999996531      1  1334455556566655455444


Q ss_pred             cc---cccCCCCcceeeHHHHHHHHHHhhcCC---CCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CC
Q 035965          236 SS---VSNRMGSIALVHIEDICNAHIFLMEND---RAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SV  306 (348)
Q Consensus       236 ~~---~~~~~~~r~~i~v~D~a~~~~~~~~~~---~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~  306 (348)
                      |.   ...+++.|+|||++|+|++++.+++++   ..+++||++ ++++|+.|+++.+.+.+|. +.+....+..+  ..
T Consensus       223 g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~  301 (341)
T 3enk_A          223 GSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGR-AVPYELVARRPGDVA  301 (341)
T ss_dssp             CSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCS-CCCEEEECCCTTCCS
T ss_pred             CCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCC-CcceeeCCCCCCCcc
Confidence            41   124568999999999999999999872   456789885 5699999999999999986 44433222222  45


Q ss_pred             ccccChHHHH-HcCCccccChhHHHHHHHHHHHHcC
Q 035965          307 PSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       307 ~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      ...+|++|++ +|||+|+++++|+|+++++|++++.
T Consensus       302 ~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~  337 (341)
T 3enk_A          302 ECYANPAAAAETIGWKAERDLERMCADHWRWQENNP  337 (341)
T ss_dssp             EECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHST
T ss_pred             ccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcC
Confidence            6788999998 8999999999999999999999874

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=4.7e-47  Score=339.34  Aligned_cols=297  Identities=20%  Similarity=0.211  Sum_probs=228.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      ||+|||||||||||++|+++|+++| .|+++++..... ...     ...++++.+|++| +++.++++++|+|||+|+.
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~   73 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----NEAARLVKADLAA-DDIKDYLKGAEEVWHIAAN   73 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----CTTEEEECCCTTT-SCCHHHHTTCSEEEECCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----CCCcEEEECcCCh-HHHHHHhcCCCEEEECCCC
Confidence            5789999999999999999999999 555555543322 211     2478999999999 8899999999999999996


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      ........+     + ..++++|+.++.++++++++.+ +++|||+||.++|+....     .+++|+.+..        
T Consensus        74 ~~~~~~~~~-----~-~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~~~-----~~~~E~~~~~--------  133 (313)
T 3ehe_A           74 PDVRIGAEN-----P-DEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEAKV-----IPTPEDYPTH--------  133 (313)
T ss_dssp             CCCC-CCCC-----H-HHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSCSS-----SSBCTTSCCC--------
T ss_pred             CChhhhhhC-----H-HHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcCCC-----CCCCCCCCCC--------
Confidence            544333333     4 4889999999999999999988 889999999987664332     5788887654        


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVH  249 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~  249 (348)
                       |.+.|+.+|.++|.+++.++++++++++++||++||||+....  .....+.....+.. .+...+   .+++.|+|||
T Consensus       134 -~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~-~~~~~~---~g~~~~~~i~  206 (313)
T 3ehe_A          134 -PISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHG--VIYDFIMKLKRNPE-ELEILG---NGEQNKSYIY  206 (313)
T ss_dssp             -CCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCS--HHHHHHHHHHHCTT-EEEEST---TSCCEECCEE
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcC--hHHHHHHHHHcCCC-ceEEeC---CCCeEEeEEE
Confidence             6788999999999999999999999999999999999987642  22233444444432 222233   3448899999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCC----C-CCCccccChHHHHHcCCccc
Q 035965          250 IEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGEN----Q-SSVPSVISSEKLKDLGFNYK  323 (348)
Q Consensus       250 v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~LG~~p~  323 (348)
                      ++|+|++++.+++....+++||++ ++++|+.|+++.+.+.+|.. .+......    . ......+|++|+++|||+|+
T Consensus       207 v~Dva~a~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~  285 (313)
T 3ehe_A          207 ISDCVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLS-PRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPR  285 (313)
T ss_dssp             HHHHHHHHHHHTTCCSSEEEEECCCSCCEEHHHHHHHHHHHTTCC-CEEEEC------------CCBCCHHHHHHTCCCS
T ss_pred             HHHHHHHHHHHhccCCCCceEEECCCCCeeHHHHHHHHHHHhCCC-CceEECCCccCCccccceeccCHHHHHHcCCCCC
Confidence            999999999999966567789886 46999999999999999862 22222111    1 13457789999999999999


Q ss_pred             cChhHHHHHHHHHHHHcCC
Q 035965          324 HGIEDIICQTIASCVDCGF  342 (348)
Q Consensus       324 ~~~~e~l~~~~~~~~~~~~  342 (348)
                      ++++|+|+++++|++++.-
T Consensus       286 ~~~~e~l~~~~~~~~~~~~  304 (313)
T 3ehe_A          286 YNSEEAVRMAVRDLVEDLD  304 (313)
T ss_dssp             CCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCcc
Confidence            9999999999999987543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=1.4e-46  Score=337.47  Aligned_cols=314  Identities=34%  Similarity=0.638  Sum_probs=230.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc-CCCc---c-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVR-DPGK---L-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r-~~~~---~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      +|+|||||||||||++|+++|+++|++|++++| ++..   . ....+....++++++.+|++|.+++.++++++|+|||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   80 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH   80 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence            478999999999999999999999999999998 5432   1 1111110112578889999999999999999999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      +|+.....  ..+     +...++++|+.++.+++++|.+. + +++|||+||.+++++....   ..+++|+++.+.++
T Consensus        81 ~A~~~~~~--~~~-----~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~---~~~~~e~~~~~~~~  149 (322)
T 2p4h_X           81 TASPIDFA--VSE-----PEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKD---KDVLDESDWSDVDL  149 (322)
T ss_dssp             CCCCC---------------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSC---CSEECTTCCCCHHH
T ss_pred             cCCcccCC--CCC-----hHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCC---CeecCCccccchhh
Confidence            99754211  122     22358999999999999999987 5 8899999998866554321   24778887655433


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCC
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS  244 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (348)
                      ..+..+..+.|+.||.++|.+++.++++++++++++||++||||......+.....+...+.+....+.   .     ..
T Consensus       150 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~---~-----~~  221 (322)
T 2p4h_X          150 LRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIG---V-----TR  221 (322)
T ss_dssp             HHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCC---E-----EE
T ss_pred             hcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCc---C-----CC
Confidence            222222223699999999999999988889999999999999998654333333223333444432222   1     12


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcc--cCCCCCCCccccChHHHHHcCCcc
Q 035965          245 IALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTF--EGENQSSVPSVISSEKLKDLGFNY  322 (348)
Q Consensus       245 r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~LG~~p  322 (348)
                      ++|+|++|+|++++.+++++...|.||++++.+|+.|+++.+.+..+..++|..  ...........+|++|+++|||+|
T Consensus       222 ~~~i~v~Dva~a~~~~~~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p  301 (322)
T 2p4h_X          222 FHMVHVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDAGFDF  301 (322)
T ss_dssp             EEEEEHHHHHHHHHHHHHSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTCCCEECCEECCHHHHHTTCCC
T ss_pred             cCEEEHHHHHHHHHHHhhCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCCCCccccCCCCCcceecccHHHHHhCCcc
Confidence            379999999999999998766567799777799999999999998865445433  222111235778999999999999


Q ss_pred             ccChhHHHHHHHHHHHHcCCC
Q 035965          323 KHGIEDIICQTIASCVDCGFL  343 (348)
Q Consensus       323 ~~~~~e~l~~~~~~~~~~~~~  343 (348)
                      +++++|+|+++++|+++++.+
T Consensus       302 ~~~~~~~l~~~~~~~~~~~~~  322 (322)
T 2p4h_X          302 KYTIEDMFDDAIQCCKEKGYL  322 (322)
T ss_dssp             CCCHHHHHHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHHHHHHhcCCC
Confidence            999999999999999988764

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=9.7e-47  Score=337.11  Aligned_cols=295  Identities=18%  Similarity=0.162  Sum_probs=231.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      |+|||||||||||++|+++|+++|++|++++|+.... ...     ..+++++.+|+.|.+ +.+++++ |+|||+|+..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~   73 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANP   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----CTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----CCCceEEECccccHH-HHhhcCC-CEEEECCCCC
Confidence            5899999999999999999999999999999977644 221     247899999999998 8888887 9999999965


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA  170 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  170 (348)
                      .......+     + ...+++|+.++.+++++|++.+ +++|||+||.++|+....     .+++|+.+..         
T Consensus        74 ~~~~~~~~-----~-~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~~~-----~~~~e~~~~~---------  132 (312)
T 3ko8_A           74 EVRLSTTE-----P-IVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDADV-----IPTPEEEPYK---------  132 (312)
T ss_dssp             SSSGGGSC-----H-HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSS-----SSBCTTSCCC---------
T ss_pred             CchhhhhC-----H-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCCCC-----CCCCCCCCCC---------
Confidence            44433333     4 3788999999999999999988 889999999997665433     5788887654         


Q ss_pred             CcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeH
Q 035965          171 SGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI  250 (348)
Q Consensus       171 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v  250 (348)
                      |.+.|+.+|.++|.+++.++++.+++++++||++||||+....  .....+.....+.. .+...+.   +.+.++|+|+
T Consensus       133 p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~--~~~~~~~~~~~~~~-~~~~~~~---g~~~~~~i~v  206 (312)
T 3ko8_A          133 PISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHG--VIYDFIMKLRRNPN-VLEVLGD---GTQRKSYLYV  206 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSS--HHHHHHHHHHHCTT-EEEEC-------CEECEEEH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCC--hHHHHHHHHHhCCC-CeEEcCC---CCeEEeeEEH
Confidence            7789999999999999999998899999999999999986642  22233434444432 2322333   3478999999


Q ss_pred             HHHHHHHHHhhcC---C-CCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCC-------CC-CCCccccChHHHH-
Q 035965          251 EDICNAHIFLMEN---D-RAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGE-------NQ-SSVPSVISSEKLK-  316 (348)
Q Consensus       251 ~D~a~~~~~~~~~---~-~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~-  316 (348)
                      +|+|++++.++++   + ..++.||++ ++.+|+.|+++.+.+.+|.. .+.....       .. ......+|++|++ 
T Consensus       207 ~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  285 (312)
T 3ko8_A          207 RDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLR-PEIRLVPSTPDGRGWPGDVKYMTLAVTKLMK  285 (312)
T ss_dssp             HHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCC-CEEEEC----------CCCSEECBCCHHHHH
T ss_pred             HHHHHHHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCC-CceeecCccccccCCCCCccccccCHHHHHH
Confidence            9999999999987   3 345679886 46999999999999999862 2221110       01 1446789999997 


Q ss_pred             HcCCccccChhHHHHHHHHHHHHcC
Q 035965          317 DLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       317 ~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      .|||+|+++++|+|+++++|+++++
T Consensus       286 ~lG~~p~~~~~~~l~~~~~~~~~~~  310 (312)
T 3ko8_A          286 LTGWRPTMTSAEAVKKTAEDLAKEL  310 (312)
T ss_dssp             HHCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHhhh
Confidence            8999999999999999999999875

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=7.1e-46  Score=334.10  Aligned_cols=305  Identities=17%  Similarity=0.224  Sum_probs=236.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~   88 (348)
                      ||+|||||||||||++|+++|+++|++|++++|...... ..+   ..+++++.+|++|.+++.++++  ++|+|||+|+
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~   76 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE-DAI---TEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAA   76 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-GGS---CTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch-hhc---CCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCc
Confidence            578999999999999999999999999999999764321 111   1268899999999999999988  8999999999


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      .........+     + ..++++|+.++.+++++|++.+ +++|||+||.++|+.. .    ..+++|+++..       
T Consensus        77 ~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~-~----~~~~~E~~~~~-------  137 (330)
T 2c20_A           77 DSLVGVSMEK-----P-LQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEV-D----VDLITEETMTN-------  137 (330)
T ss_dssp             CCCHHHHHHS-----H-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSC-S----SSSBCTTSCCC-------
T ss_pred             ccCccccccC-----H-HHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCC-C----CCCCCcCCCCC-------
Confidence            7643321122     3 3788999999999999999888 8899999999876543 2    25788887654       


Q ss_pred             CCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC-------CCchHHHHHhhhcCCCCccccccc---c
Q 035965          169 KASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS-------VPSSIQVLLSPITGDSKFFSILSS---V  238 (348)
Q Consensus       169 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~---~  238 (348)
                        |.+.|+.+|.++|.+++.++++++++++++||++||||+....       ...++..+.+...+....+...|.   .
T Consensus       138 --~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  215 (330)
T 2c20_A          138 --PTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNT  215 (330)
T ss_dssp             --CSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSS
T ss_pred             --CCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCcccc
Confidence              6678999999999999999988899999999999999974321       123444455544444333433331   1


Q ss_pred             ccCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccCh
Q 035965          239 SNRMGSIALVHIEDICNAHIFLMENDR---AQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISS  312 (348)
Q Consensus       239 ~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~  312 (348)
                      ..+++.++|||++|+|++++.+++++.   .++.||++ ++++|+.|+++.+.+.+|. +.+....+...  .....+|+
T Consensus       216 ~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~  294 (330)
T 2c20_A          216 PDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNH-EIPAEVAPRRAGDPARLVASS  294 (330)
T ss_dssp             SSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTS-CCCEEEECCCSSCCSEECBCC
T ss_pred             CCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCC-CCceeeCCCCCCcccccccCH
Confidence            134578999999999999999998643   25689886 5699999999999999986 44432222111  34678899


Q ss_pred             HHHH-HcCCcccc-ChhHHHHHHHHHHHHcC
Q 035965          313 EKLK-DLGFNYKH-GIEDIICQTIASCVDCG  341 (348)
Q Consensus       313 ~~~~-~LG~~p~~-~~~e~l~~~~~~~~~~~  341 (348)
                      +|++ +|||+|++ +++|+|+++++|++++.
T Consensus       295 ~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~~  325 (330)
T 2c20_A          295 QKAKEKLGWDPRYVNVKTIIEHAWNWHQKQP  325 (330)
T ss_dssp             HHHHHHHCCCCSCCCHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHhCCCCccCCHHHHHHHHHHHHHHhh
Confidence            9998 89999999 99999999999998754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.7e-46  Score=343.70  Aligned_cols=306  Identities=18%  Similarity=0.247  Sum_probs=235.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCC-CcchHHHhhcCCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQ-VEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~d~Vih   85 (348)
                      |+||+|||||||||||++|+++|+++ |++|++++|+..+. .+..    .++++++.+|++ |.+.+.++++++|+|||
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih   97 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----HERMHFFEGDITINKEWVEYHVKKCDVILP   97 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----STTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----CCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence            56789999999999999999999998 99999999987654 3222    248999999999 99999999999999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +|+......+..+     +. .++++|+.++.+++++|++.+  ++|||+||.++|+....     .+++|+++...  .
T Consensus        98 ~A~~~~~~~~~~~-----~~-~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~~~-----~~~~e~~~~~~--~  162 (372)
T 3slg_A           98 LVAIATPATYVKQ-----PL-RVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCAD-----EQFDPDASALT--Y  162 (372)
T ss_dssp             CBCCCCHHHHHHC-----HH-HHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSCCC-----SSBCTTTCCEE--E
T ss_pred             cCccccHHHHhhC-----HH-HHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCCCC-----CCCCccccccc--c
Confidence            9998765443333     43 788999999999999999988  89999999886654433     46777764310  0


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC------CCchHH-HHHhhhcCCCCcccccccc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS------VPSSIQ-VLLSPITGDSKFFSILSSV  238 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~  238 (348)
                      .+...|.+.|+.+|+++|.+++.++++ +++++++||++||||+....      ....+. ++.....+....+.  +  
T Consensus       163 ~p~~~p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--  237 (372)
T 3slg_A          163 GPINKPRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLV--D--  237 (372)
T ss_dssp             CCTTCTTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEG--G--
T ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEe--C--
Confidence            111236678999999999999999987 99999999999999987631      122333 34455556543332  2  


Q ss_pred             ccCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEec--cCcChHHHHHHHHHhCCCCCCCccc---------C----
Q 035965          239 SNRMGSIALVHIEDICNAHIFLMENDR---AQGQYICCV--KSCPISEFIDHLKLEYPSSKMQTFE---------G----  300 (348)
Q Consensus       239 ~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~--~~~s~~el~~~i~~~~~~~~~~~~~---------~----  300 (348)
                       .+++.|+|||++|+|++++.+++++.   .+++||+++  +.+|+.|+++.+.+.+|.. .+...         .    
T Consensus       238 -~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~  315 (372)
T 3slg_A          238 -GGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEF-PEYADSAKRVKLVETTSGA  315 (372)
T ss_dssp             -GGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHC-TTTHHHHHTCCEEEC----
T ss_pred             -CCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCC-cccccccccceeeeccccc
Confidence             23478999999999999999999874   567898866  4999999999999988752 11100         0    


Q ss_pred             --CC--CCCCccccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          301 --EN--QSSVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       301 --~~--~~~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                        ..  .......+|++|++ .|||+|+++++|+|+++++|++++
T Consensus       316 ~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  360 (372)
T 3slg_A          316 YYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGH  360 (372)
T ss_dssp             ---------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred             cccCCccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence              00  11346778999999 799999999999999999999753

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=6.8e-46  Score=337.85  Aligned_cols=305  Identities=16%  Similarity=0.128  Sum_probs=232.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih   85 (348)
                      +++|+|||||||||||++|+++|+++|++|++++|+..+. ..........+++++.+|++|.+++.+++++  +|+|||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            4568999999999999999999999999999999976543 2221111134789999999999999998875  899999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +|+.........+     + ..++++|+.++.+++++|.+.+.+++|||+||.++|+....    ..+++|+++..    
T Consensus        87 ~A~~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~----~~~~~E~~~~~----  152 (357)
T 1rkx_A           87 MAAQPLVRLSYSE-----P-VETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW----IWGYRENEAMG----  152 (357)
T ss_dssp             CCSCCCHHHHHHC-----H-HHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS----SSCBCTTSCBC----
T ss_pred             CCCCcccccchhC-----H-HHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCc----CCCCCCCCCCC----
Confidence            9996432221122     3 37889999999999999998754789999999987654432    23677776543    


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhC---------CCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCccccc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANEN---------KIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSIL  235 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---------~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  235 (348)
                           |.+.|+.+|.++|.+++.+++++         +++++++||++||||+.... ...+. ++.....+....+.  
T Consensus       153 -----~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~g~~~~~~--  224 (357)
T 1rkx_A          153 -----GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVIIR--  224 (357)
T ss_dssp             -----CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEECS--
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc-ccHHHHHHHHHhcCCCEEEC--
Confidence                 66789999999999999998764         89999999999999986432 22333 33344445443322  


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcC-----CCCCceEEEec---cCcChHHHHHHHHHhCCCCCCCcccCCC-CC--
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMEN-----DRAQGQYICCV---KSCPISEFIDHLKLEYPSSKMQTFEGEN-QS--  304 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~-----~~~~~~y~~~~---~~~s~~el~~~i~~~~~~~~~~~~~~~~-~~--  304 (348)
                          .+.+.|+|||++|+|++++.++++     ...+++||+++   +++|+.|+++.+.+.+|. +.+....+. .+  
T Consensus       225 ----~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~  299 (357)
T 1rkx_A          225 ----NPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGE-GASWQLDGNAHPHE  299 (357)
T ss_dssp             ----CTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCT-TCCEEC-------C
T ss_pred             ----CCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCC-CCccccCCCCCCcC
Confidence                234788999999999999998874     13467899863   589999999999999885 333222111 11  


Q ss_pred             CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          305 SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       305 ~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      .....+|++|++ .|||+|+++++|+|+++++|+++.
T Consensus       300 ~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  336 (357)
T 1rkx_A          300 AHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNW  336 (357)
T ss_dssp             CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             cccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHH
Confidence            456789999999 799999999999999999999764

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=6e-45  Score=328.87  Aligned_cols=303  Identities=17%  Similarity=0.150  Sum_probs=230.7

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCc--c-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGK--L-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~--~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      ++|+|||||||||||++|+++|+++|  ++|++++|....  . .+... ...++++++.+|++|.+++.+++.++|+||
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   80 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDL-EDDPRYTFVKGDVADYELVKELVRKVDGVV   80 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhh-ccCCceEEEEcCCCCHHHHHHHhhCCCEEE
Confidence            34689999999999999999999996  899999997532  1 11111 113478999999999999999999999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      |+|+.........+     + ..++++|+.++.+++++|.+.+..++|||+||.++|+....     .+++|+++..   
T Consensus        81 h~A~~~~~~~~~~~-----~-~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~-----~~~~E~~~~~---  146 (336)
T 2hun_A           81 HLAAESHVDRSISS-----P-EIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILK-----GSFTENDRLM---  146 (336)
T ss_dssp             ECCCCCCHHHHHHC-----T-HHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSS-----SCBCTTBCCC---
T ss_pred             ECCCCcChhhhhhC-----H-HHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCC-----CCcCCCCCCC---
Confidence            99997643221122     3 37899999999999999998863379999999986654322     4788877543   


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCccccccccccCCC
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSILSSVSNRMG  243 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  243 (348)
                            |.+.|+.+|.++|.+++.++++++++++++||++||||+....  ..+. .+.....+....+  .+.   +.+
T Consensus       147 ------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~--~~~---~~~  213 (336)
T 2hun_A          147 ------PSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE--KLIPKTIIRASLGLKIPI--YGT---GKN  213 (336)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT--SHHHHHHHHHHTTCCEEE--ETC------
T ss_pred             ------CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC--chHHHHHHHHHcCCCceE--eCC---CCc
Confidence                  6678999999999999999998999999999999999986532  2222 3334444543222  222   347


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccChHHHH-HcC
Q 035965          244 SIALVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISSEKLK-DLG  319 (348)
Q Consensus       244 ~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~LG  319 (348)
                      .++|+|++|+|++++.+++++..++.||+++ +.+|+.|+++.+.+.+|............+  .....+|++|++ +||
T Consensus       214 ~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  293 (336)
T 2hun_A          214 VRDWLYVEDHVRAIELVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLK  293 (336)
T ss_dssp             CEEEEEHHHHHHHHHHHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHHC
T ss_pred             eeeeEEHHHHHHHHHHHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHhC
Confidence            8899999999999999998766677898865 589999999999999986321111111111  234678999999 799


Q ss_pred             CccccChhHHHHHHHHHHHHc
Q 035965          320 FNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       320 ~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      |+|+++++|+|+++++|++++
T Consensus       294 ~~p~~~~~~~l~~~~~~~~~~  314 (336)
T 2hun_A          294 WRPKYTFDEGIKKTIDWYLKN  314 (336)
T ss_dssp             CCCSSCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHHHHhC
Confidence            999999999999999999864

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=7.8e-46  Score=336.16  Aligned_cols=296  Identities=19%  Similarity=0.221  Sum_probs=234.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ..++|+|||||||||||++|+++|+++|++|++++|+...          .+++++.+|++|.+++.++++++|+|||+|
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~----------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   85 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG----------TGGEEVVGSLEDGQALSDAIMGVSAVLHLG   85 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS----------SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC----------CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence            3457899999999999999999999999999999998753          368899999999999999999999999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      +......  ..     . ..++++|+.++.+++++|++.+ +++|||+||.++|+.....   ..+++|+++..      
T Consensus        86 ~~~~~~~--~~-----~-~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~---~~~~~E~~~~~------  147 (347)
T 4id9_A           86 AFMSWAP--AD-----R-DRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPE---FLPVTEDHPLC------  147 (347)
T ss_dssp             CCCCSSG--GG-----H-HHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCS---SSSBCTTSCCC------
T ss_pred             cccCcch--hh-----H-HHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCC---CCCcCCCCCCC------
Confidence            9765433  11     2 4789999999999999999988 8999999999876653221   35888888654      


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccc-------------cCCCCCC---------CCchHHH-HHhh
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVA-------------GPFLTSS---------VPSSIQV-LLSP  224 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~-------------G~~~~~~---------~~~~~~~-~~~~  224 (348)
                         |.+.|+.+|.++|.+++.++++++++++++||++||             ||+....         ....+.. +...
T Consensus       148 ---~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (347)
T 4id9_A          148 ---PNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSR  224 (347)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred             ---CCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHH
Confidence               778999999999999999999999999999999999             7764321         0122332 3344


Q ss_pred             hcCCCCccccccccccCCCCcce----eeHHHHHHHHHHhhcCC-CCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcc
Q 035965          225 ITGDSKFFSILSSVSNRMGSIAL----VHIEDICNAHIFLMEND-RAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTF  298 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~----i~v~D~a~~~~~~~~~~-~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~  298 (348)
                      ..+.+..+  .+.   +.+.|+|    +|++|+|++++.+++++ ..++.||++ ++.+|+.|+++.+.+.+|. +.+..
T Consensus       225 ~~~~~~~~--~g~---~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~  298 (347)
T 4id9_A          225 DIGEPSHI--LAR---NENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGL-PIVTV  298 (347)
T ss_dssp             CCSSCCEE--EEE---CTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCC-CEEEE
T ss_pred             HcCCCeEE--eCC---CCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCC-CCcee
Confidence            44433222  333   3478899    99999999999999988 457789885 5689999999999999986 43332


Q ss_pred             cCCCCCCCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcC
Q 035965          299 EGENQSSVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      ..+.. .....+|++|++ .|||+|+++++|+|+++++|++++.
T Consensus       299 ~~p~~-~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~  341 (347)
T 4id9_A          299 DFPGD-GVYYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRL  341 (347)
T ss_dssp             ECSSC-CCBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred             eCCCc-ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence            21111 336789999999 7999999999999999999998754

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=9.3e-45  Score=332.87  Aligned_cols=310  Identities=17%  Similarity=0.125  Sum_probs=234.8

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      +..+||+|||||||||||++|+++|+++|++|++++|+..+.....    ..+++++.+|++|.+++.++++++|+|||+
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~  100 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED----MFCDEFHLVDLRVMENCLKVTEGVDHVFNL  100 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG----GTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc----cCCceEEECCCCCHHHHHHHhCCCCEEEEC
Confidence            3446789999999999999999999999999999999865431111    136889999999999999999999999999


Q ss_pred             cccCccccc-cccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           87 AASMEFDIN-VKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        87 a~~~~~~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      |+....... ..+     + ..++++|+.++.+++++|++.+ +++|||+||.++|+..........+++|+++.+    
T Consensus       101 A~~~~~~~~~~~~-----~-~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~----  169 (379)
T 2c5a_A          101 AADMGGMGFIQSN-----H-SVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWP----  169 (379)
T ss_dssp             CCCCCCHHHHTTC-----H-HHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSS----
T ss_pred             ceecCcccccccC-----H-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCCC----
Confidence            997543211 122     3 4789999999999999999888 889999999987654332110013566665211    


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCC--chHH-HHHhhhcCCCCccccccccccCC
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVP--SSIQ-VLLSPITGDSKFFSILSSVSNRM  242 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~  242 (348)
                         ..|.+.|+.+|.++|.+++.++++++++++++||++||||+......  ..+. ++.....+.. .+...+   .+.
T Consensus       170 ---~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g---~g~  242 (379)
T 2c5a_A          170 ---AEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTD-RFEMWG---DGL  242 (379)
T ss_dssp             ---BCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSS-CEEEES---CSC
T ss_pred             ---CCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCC-ceEEeC---CCC
Confidence               12567899999999999999988889999999999999998654221  1232 3334444543 122223   334


Q ss_pred             CCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCC-CCCccccChHHHH-HcC
Q 035965          243 GSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQ-SSVPSVISSEKLK-DLG  319 (348)
Q Consensus       243 ~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~LG  319 (348)
                      +.++|+|++|+|++++.+++++ .++.||++ ++.+|+.|+++.+.+.+|. +.+....+.. ......+|+++++ .||
T Consensus       243 ~~~~~i~v~Dva~ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~p~~~~~~~~~~d~~k~~~~lG  320 (379)
T 2c5a_A          243 QTRSFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEK-KLPIHHIPGPEGVRGRNSDNNLIKEKLG  320 (379)
T ss_dssp             CEECCEEHHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTC-CCCEEEECCCCCCSBCEECCHHHHHHHS
T ss_pred             eeEEEEEHHHHHHHHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCC-CCceeeCCCCCCcccccCCHHHHHHHhC
Confidence            7889999999999999999876 56788875 5699999999999999986 3332211111 1345678999999 799


Q ss_pred             CccccChhHHHHHHHHHHHHc
Q 035965          320 FNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       320 ~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      |+|+++++|+|+++++|++++
T Consensus       321 ~~p~~~l~e~l~~~~~~~~~~  341 (379)
T 2c5a_A          321 WAPNMRLKEGLRITYFWIKEQ  341 (379)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHh
Confidence            999999999999999999764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=3.7e-45  Score=328.15  Aligned_cols=299  Identities=18%  Similarity=0.182  Sum_probs=230.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih   85 (348)
                      ...+|+|||||||||||++|+++|+++|++|++++|+.... .  +     +++++.+|++|.+++.+++++  +|+|||
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~--l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   80 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAK-L--P-----NVEMISLDIMDSQRVKKVISDIKPDYIFH   80 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCC-C--T-----TEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccc-c--c-----eeeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            34578999999999999999999999999999999986531 1  1     688999999999999998875  999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecC-CCCCCCCcccCCCCCCcch
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKD-SSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~-~~~~~~~~~~E~~~~~~~~  164 (348)
                      +|+.........+     + ..++++|+.++.+++++|.+.+..++|||+||.++|+... .    ..+++|+++..   
T Consensus        81 ~A~~~~~~~~~~~-----~-~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~----~~~~~E~~~~~---  147 (321)
T 2pk3_A           81 LAAKSSVKDSWLN-----K-KGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPE----ESPVSEENQLR---  147 (321)
T ss_dssp             CCSCCCHHHHTTC-----H-HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGG----GCSBCTTSCCB---
T ss_pred             cCcccchhhhhhc-----H-HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCC----CCCCCCCCCCC---
Confidence            9997654322223     3 4789999999999999998763378999999998765431 2    25788887653   


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHH-HHhhhc---CCCCcccccccccc
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQV-LLSPIT---GDSKFFSILSSVSN  240 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~  240 (348)
                            |.+.|+.+|.++|.+++.++++++++++++||+++|||+....  ..+.. +.....   |....+...+   .
T Consensus       148 ------~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~---~  216 (321)
T 2pk3_A          148 ------PMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG--FVTQDFAKQIVDIEMEKQEPIIKVG---N  216 (321)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT--SHHHHHHHHHHHHHTTSSCSEEEES---C
T ss_pred             ------CCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC--chHHHHHHHHHHHhcCCCCCeEEeC---C
Confidence                  6778999999999999999888899999999999999987642  12222 223323   4201122222   2


Q ss_pred             CCCCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCCcccCC--CCC--CCccccChHHH
Q 035965          241 RMGSIALVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQTFEGE--NQS--SVPSVISSEKL  315 (348)
Q Consensus       241 ~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~  315 (348)
                      +.+.++|+|++|+|++++.+++++..++.|++++ +.+|+.|+++.+.+.+|. +.+....+  ..+  .....+|++++
T Consensus       217 ~~~~~~~v~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~p~~~~~~~~~~~~~d~~k~  295 (321)
T 2pk3_A          217 LEAVRDFTDVRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANV-KIDTELNPLQLRPSEVPTLIGSNKRL  295 (321)
T ss_dssp             SSCEEEEEEHHHHHHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSS-CCEEEECGGGCCSSCCSBCCBCCHHH
T ss_pred             CCcEEeeEEHHHHHHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCC-CCceeeccccCCCcccchhccCHHHH
Confidence            3478899999999999999998875677898864 599999999999999986 33221111  111  35678899999


Q ss_pred             H-HcCCccccChhHHHHHHHHHHHH
Q 035965          316 K-DLGFNYKHGIEDIICQTIASCVD  339 (348)
Q Consensus       316 ~-~LG~~p~~~~~e~l~~~~~~~~~  339 (348)
                      + .|||+|+++++|+|+++++|+++
T Consensus       296 ~~~lG~~p~~~~~e~l~~~~~~~~~  320 (321)
T 2pk3_A          296 KDSTGWKPRIPLEKSLFEILQSYRQ  320 (321)
T ss_dssp             HHHHCCCCCSCHHHHHHHHHHHHHT
T ss_pred             HHHcCCCcCCCHHHHHHHHHHHHhc
Confidence            9 79999999999999999999975

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=7.4e-45  Score=331.61  Aligned_cols=299  Identities=18%  Similarity=0.134  Sum_probs=230.9

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHH--CCCeEEEEEcCCCcc--------ccccc-cCCCCCeEEEEccCCCcchHHH
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLE--RGYIVHATVRDPGKL--------QIFSK-WTRSDRLRLFQADLQVEGSFDK   75 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~--~g~~V~~~~r~~~~~--------~~~~~-~~~~~~~~~~~~Dl~d~~~~~~   75 (348)
                      +.+++|+|||||||||||++|+++|++  .|++|++++|.....        ..... .....++.++.+|++|.+++.+
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            356678999999999999999999999  899999999966410        00000 0112467999999999999999


Q ss_pred             h-hcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           76 A-VMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        76 ~-~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      + ..++|+|||+|+......  .+     + ..++++|+.++.+++++|++.+ ++ |||+||+++|+.. .     .++
T Consensus        86 ~~~~~~D~vih~A~~~~~~~--~~-----~-~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~-~-----~~~  149 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSDTTM--LN-----Q-ELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNT-K-----APN  149 (362)
T ss_dssp             HTTSCCSEEEECCCCCGGGC--CC-----H-HHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSC-C-----SSB
T ss_pred             hhccCCCEEEECCccCCccc--cC-----H-HHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCC-C-----CCC
Confidence            8 789999999999654421  22     3 4889999999999999999988 55 9999998866533 3     278


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC--CchHH-HHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV--PSSIQ-VLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~-~~~~~~~~~~~~  231 (348)
                      +|+++..         |.+.|+.+|.++|.+++.++++  ++++++||++||||+.....  ...+. ++.....+....
T Consensus       150 ~E~~~~~---------p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (362)
T 3sxp_A          150 VVGKNES---------PENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVK  218 (362)
T ss_dssp             CTTSCCC---------CSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEE
T ss_pred             CCCCCCC---------CCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeE
Confidence            8887654         7789999999999999998775  89999999999999876421  12333 333444444322


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCC-C--CCc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQ-S--SVP  307 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~-~--~~~  307 (348)
                      +  .+   .+.+.++|+|++|+|++++.+++++..+ .||++ ++++|+.|+++.+.+.+|  ..+....+.+ .  ...
T Consensus       219 ~--~~---~g~~~~~~i~v~Dva~ai~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g--~~~~~~~~~~~~~~~~~  290 (362)
T 3sxp_A          219 L--FE---FGEQLRDFVYIEDVIQANVKAMKAQKSG-VYNVGYSQARSYNEIVSILKEHLG--DFKVTYIKNPYAFFQKH  290 (362)
T ss_dssp             C--SG---GGCCEEECEEHHHHHHHHHHHTTCSSCE-EEEESCSCEEEHHHHHHHHHHHHC--CCEEECCC-------CC
T ss_pred             E--EC---CCCeEEccEEHHHHHHHHHHHHhcCCCC-EEEeCCCCCccHHHHHHHHHHHcC--CCceEECCCCCcCcccc
Confidence            2  22   3347899999999999999999987654 99885 569999999999999998  3333222221 1  567


Q ss_pred             cccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          308 SVISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       308 ~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      ..+|++|++ .|||+|+++++|+|+++++|+++.
T Consensus       291 ~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  324 (362)
T 3sxp_A          291 TQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAI  324 (362)
T ss_dssp             CCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC
T ss_pred             eecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            889999997 899999999999999999999753

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.2e-44  Score=328.52  Aligned_cols=304  Identities=17%  Similarity=0.157  Sum_probs=232.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCCCcc---ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDPGKL---QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ||+|||||||||||++|+++|+++  |++|++++|+....   .....  ..++++++.+|++|.+++.++++++|+|||
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   81 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAAKADAIVH   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhhcCCEEEE
Confidence            579999999999999999999999  89999999975321   11111  124789999999999999999999999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCC-------CCCCCcccCCC
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSS-------GEWRPVVDESC  158 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~-------~~~~~~~~E~~  158 (348)
                      +|+.........+     + ..++++|+.++.+++++|.+.+ + +|||+||.++|+.....       .....+++|++
T Consensus        82 ~A~~~~~~~~~~~-----~-~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~  153 (348)
T 1oc2_A           82 YAAESHNDNSLND-----P-SPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET  153 (348)
T ss_dssp             CCSCCCHHHHHHC-----C-HHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS
T ss_pred             CCcccCccchhhC-----H-HHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCCC
Confidence            9997653221122     3 3789999999999999999988 6 99999999876543210       00014677776


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchH-HHHHhhhcCCCCccccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSI-QVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  237 (348)
                      +..         |.+.|+.+|.++|.+++.++++++++++++||++||||+....  ..+ ..+.....+....+  .+ 
T Consensus       154 ~~~---------~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~--~~-  219 (348)
T 1oc2_A          154 NYN---------PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKL--YG-  219 (348)
T ss_dssp             CCC---------CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT--SHHHHHHHHHHHTCCCEE--ET-
T ss_pred             CCC---------CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc--chHHHHHHHHHcCCCceE--ec-
Confidence            543         6678999999999999999888899999999999999987532  222 23334445544322  22 


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccChHH
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISSEK  314 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  314 (348)
                        .+.+.++|+|++|+|++++.+++++..++.||+++ +++|+.|+++.+.+.+|.......+....+  .....+|++|
T Consensus       220 --~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k  297 (348)
T 1oc2_A          220 --EGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASK  297 (348)
T ss_dssp             --TSCCEEECEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHH
T ss_pred             --CCCceEeeEEHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHHH
Confidence              23478899999999999999998766667898865 589999999999999986321111111111  2345689999


Q ss_pred             HH-HcCCccccC-hhHHHHHHHHHHHHc
Q 035965          315 LK-DLGFNYKHG-IEDIICQTIASCVDC  340 (348)
Q Consensus       315 ~~-~LG~~p~~~-~~e~l~~~~~~~~~~  340 (348)
                      ++ .|||+|+++ ++|+|+++++|++++
T Consensus       298 ~~~~lG~~p~~~~~~~~l~~~~~~~~~~  325 (348)
T 1oc2_A          298 LRDELGWTPQFTDFSEGLEETIQWYTDN  325 (348)
T ss_dssp             HHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence            98 799999997 999999999999864

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=5.3e-45  Score=331.36  Aligned_cols=305  Identities=18%  Similarity=0.160  Sum_probs=234.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccccc---C--CCCCeEEEEccCCCcchHHHhhcCCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKW---T--RSDRLRLFQADLQVEGSFDKAVMGCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~---~--~~~~~~~~~~Dl~d~~~~~~~~~~~d   81 (348)
                      ++||+|||||||||||++|+++|+++|++|++++|+....  ......   .  ...+++++.+|++|.+++.++++++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            3578999999999999999999999999999999976421  111100   0  01478999999999999999999999


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTP  161 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~  161 (348)
                      +|||+|+.........+     + ..++++|+.++.+++++|++.+ +++|||+||.++|+....     .+++|+++..
T Consensus       105 ~vih~A~~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~-----~~~~E~~~~~  172 (352)
T 1sb8_A          105 YVLHQAALGSVPRSIND-----P-ITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPG-----LPKVEDTIGK  172 (352)
T ss_dssp             EEEECCSCCCHHHHHHC-----H-HHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCC-----SSBCTTCCCC
T ss_pred             EEEECCcccCchhhhhC-----H-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCCCC-----CCCCCCCCCC
Confidence            99999997543221122     3 3788999999999999999988 899999999987654332     4788887654


Q ss_pred             cchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC--CCchHH-HHHhhhcCCCCcccccccc
Q 035965          162 IHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS--VPSSIQ-VLLSPITGDSKFFSILSSV  238 (348)
Q Consensus       162 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~  238 (348)
                               |.+.|+.+|.++|.+++.++++.+++++++||++||||+....  ....+. ++.....+.+..+.  +  
T Consensus       173 ---------~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g--  239 (352)
T 1sb8_A          173 ---------PLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYIN--G--  239 (352)
T ss_dssp             ---------CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEE--S--
T ss_pred             ---------CCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEe--C--
Confidence                     6778999999999999999888899999999999999987543  112232 33344455443222  2  


Q ss_pred             ccCCCCcceeeHHHHHHHHHHhhcCC--CCCceEEEe-ccCcChHHHHHHHHHhC---CCCCCC--cccCCCCC--CCcc
Q 035965          239 SNRMGSIALVHIEDICNAHIFLMEND--RAQGQYICC-VKSCPISEFIDHLKLEY---PSSKMQ--TFEGENQS--SVPS  308 (348)
Q Consensus       239 ~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~y~~~-~~~~s~~el~~~i~~~~---~~~~~~--~~~~~~~~--~~~~  308 (348)
                       .+++.++|+|++|+|++++.++.+.  ..++.||++ ++++|+.|+++.+.+.+   |. +.+  ..+....+  ....
T Consensus       240 -~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~-~~~~~~~~~~~~~~~~~~~  317 (352)
T 1sb8_A          240 -DGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGV-SYHREPVYRDFREGDVRHS  317 (352)
T ss_dssp             -SSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTC-CCCCCCEEECCCTTCCSBC
T ss_pred             -CCCceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCC-CCCCCceecCCCccchhhc
Confidence             3347899999999999999988862  346789885 56999999999999998   65 222  11111111  3466


Q ss_pred             ccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          309 VISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       309 ~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      .+|++|++ +|||+|+++++|+|+++++|++++
T Consensus       318 ~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  350 (352)
T 1sb8_A          318 LADISKAAKLLGYAPKYDVSAGVALAMPWYIMF  350 (352)
T ss_dssp             CBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            78999998 799999999999999999999864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=5e-45  Score=330.96  Aligned_cols=310  Identities=16%  Similarity=0.184  Sum_probs=234.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc------c--ccccccC-CCCCeEEEEccCCCcchHHHhhc--
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK------L--QIFSKWT-RSDRLRLFQADLQVEGSFDKAVM--   78 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~------~--~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--   78 (348)
                      |+|+|||||||||||++|+++|+++|++|++++|....      .  ....+.. ...+++++.+|++|.+++.++++  
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence            35799999999999999999999999999999986543      1  1111100 12468899999999999999888  


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      ++|+|||+|+.........+     + ..++++|+.++.++++++++.+ +++|||+||.++|+.. .    ..+++|++
T Consensus        81 ~~d~vih~A~~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~-~----~~~~~E~~  148 (348)
T 1ek6_A           81 SFMAVIHFAGLKAVGESVQK-----P-LDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNP-Q----YLPLDEAH  148 (348)
T ss_dssp             CEEEEEECCSCCCHHHHHHC-----H-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSC-S----SSSBCTTS
T ss_pred             CCCEEEECCCCcCccchhhc-----h-HHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCC-C----CCCcCCCC
Confidence            89999999997643221122     3 3789999999999999999887 8899999999866543 2    35788887


Q ss_pred             CCCcchhhccCCC-cchhHhhHHHHHHHHHHHHHh-CCCcEEEEecCccccCCCCC------C--CCchHHHHHhhhcCC
Q 035965          159 QTPIHHVWNKKAS-GWVYVLSKLLSEETAFKFANE-NKIDLVSVITTTVAGPFLTS------S--VPSSIQVLLSPITGD  228 (348)
Q Consensus       159 ~~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~------~--~~~~~~~~~~~~~~~  228 (348)
                      +..         | .+.|+.+|.++|.+++.++++ .+++++++||+++|||+...      .  ...++..+.+...+.
T Consensus       149 ~~~---------p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~  219 (348)
T 1ek6_A          149 PTG---------GCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGR  219 (348)
T ss_dssp             CCC---------CCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTS
T ss_pred             CCC---------CCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhc
Confidence            643         4 678999999999999999887 23999999999999995311      0  123444455555543


Q ss_pred             CCccccccc---cccCCCCcceeeHHHHHHHHHHhhcCC--CCC-ceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCC
Q 035965          229 SKFFSILSS---VSNRMGSIALVHIEDICNAHIFLMEND--RAQ-GQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGE  301 (348)
Q Consensus       229 ~~~~~~~~~---~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~-~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~  301 (348)
                      ...+...|.   ...+.+.|+|||++|+|++++.+++++  ..+ +.||++ ++++|+.|+++.+.+.+|. +++....+
T Consensus       220 ~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~  298 (348)
T 1ek6_A          220 REALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK-KIPYKVVA  298 (348)
T ss_dssp             SSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCS-CCCEEEEC
T ss_pred             CCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCC-CCceeeCC
Confidence            333433331   113458899999999999999999875  334 689885 5689999999999999886 44432211


Q ss_pred             CCC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcC
Q 035965          302 NQS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       302 ~~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      ...  .....+|++|++ +|||+|+++++|+|+++++|++++.
T Consensus       299 ~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~  341 (348)
T 1ek6_A          299 RREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNP  341 (348)
T ss_dssp             CCTTCCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             CCCccchhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcc
Confidence            111  346778999998 7999999999999999999998763

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=1e-44  Score=332.42  Aligned_cols=305  Identities=19%  Similarity=0.202  Sum_probs=227.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      +++|+|||||||||||++|+++|+++| ++|++++|+.... ....   ..++++++.+|++|++++.++++++|+|||+
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~---~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~  106 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP---DHPAVRFSETSITDDALLASLQDEYDYVFHL  106 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC---CCTTEEEECSCTTCHHHHHHCCSCCSEEEEC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc---CCCceEEEECCCCCHHHHHHHhhCCCEEEEC
Confidence            456899999999999999999999999 9999999976543 1111   1347899999999999999999999999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCccc--CCCCCCcc
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVD--ESCQTPIH  163 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~--E~~~~~~~  163 (348)
                      |+.........+     + ..++++|+.++.+++++|++. + +++|||+||.++|+....     .+++  |+++..+ 
T Consensus       107 A~~~~~~~~~~~-----~-~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~~~-----~~~~~~E~~~~~~-  173 (377)
T 2q1s_A          107 ATYHGNQSSIHD-----P-LADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEKTF-----DDAKATEETDIVS-  173 (377)
T ss_dssp             CCCSCHHHHHHC-----H-HHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC-------------------CCCCCCC-
T ss_pred             CCccCchhhhhC-----H-HHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCCCC-----CCcCccccccccc-
Confidence            997654321122     3 378999999999999999988 6 889999999987654322     4677  7763100 


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCC---------CCCC--CchHH-HHHhhhcCCCCc
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFL---------TSSV--PSSIQ-VLLSPITGDSKF  231 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~---------~~~~--~~~~~-~~~~~~~~~~~~  231 (348)
                          ...|.+.|+.+|.++|.+++.++++.+++++++||++||||+.         ....  ...+. ++.....+.+..
T Consensus       174 ----~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~  249 (377)
T 2q1s_A          174 ----LHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLP  249 (377)
T ss_dssp             ----SSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCC
T ss_pred             ----ccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeE
Confidence                0025678999999999999999888899999999999999987         2100  12333 333444554432


Q ss_pred             cccccccccCCCCcceeeHHHHHHH-HHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCCcccCCCCC--CC-
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNA-HIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQTFEGENQS--SV-  306 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~-~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~-  306 (348)
                      +  .+   .+++.++|||++|+|++ ++.+++++.. |.||+++ +++|+.|+++.+.+.+|. +.+....+..+  .. 
T Consensus       250 ~--~g---~g~~~~~~i~v~Dva~a~i~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~p~~~~~~~~  322 (377)
T 2q1s_A          250 L--EN---GGVATRDFIFVEDVANGLIACAADGTPG-GVYNIASGKETSIADLATKINEITGN-NTELDRLPKRPWDNSG  322 (377)
T ss_dssp             C--SG---GGCCEECCEEHHHHHHHHHHHHHHCCTT-EEEECCCCCCEEHHHHHHHHHHHHTC-CSCCCCCCCCGGGCC-
T ss_pred             E--eC---CCCeEEeeEEHHHHHHHHHHHHHhcCCC-CeEEecCCCceeHHHHHHHHHHHhCC-CCCceeCCCCcccccc
Confidence            2  22   33478999999999999 9999988764 4998865 699999999999999886 33322222111  34 


Q ss_pred             ccccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          307 PSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       307 ~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      ...+|++|++ +|||+|+++++|+|+++++|++++
T Consensus       323 ~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  357 (377)
T 2q1s_A          323 KRFGSPEKARRELGFSADVSIDDGLRKTIEWTKAN  357 (377)
T ss_dssp             CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred             ccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence            6789999998 899999999999999999999864

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=7.7e-45  Score=328.02  Aligned_cols=304  Identities=15%  Similarity=0.123  Sum_probs=232.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---ccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vi   84 (348)
                      ++|+|||||||||||++|+++|+++|++|++++|+..+.   ..... ...++++++.+|++|.+++.+++++  +|+||
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL-GIEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT-TCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhc-cccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            468999999999999999999999999999999976542   11111 0124688999999999999998875  79999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCc-ceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESV-KRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      |+|+.........+     + ..++++|+.++.+++++|++.+ + ++|||+||.++|+....     .+++|+++..  
T Consensus        92 h~A~~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~~~-----~~~~E~~~~~--  157 (335)
T 1rpn_A           92 NLAAQSFVGASWNQ-----P-VTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLIQA-----ERQDENTPFY--  157 (335)
T ss_dssp             ECCSCCCHHHHTTS-----H-HHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSCSS-----SSBCTTSCCC--
T ss_pred             ECccccchhhhhhC-----h-HHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCCCC-----CCCCcccCCC--
Confidence            99997554322223     3 3789999999999999999887 5 89999999987654332     4788887654  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC-Cc-hHHHHHhhhcCCCCccccccccccC
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV-PS-SIQVLLSPITGDSKFFSILSSVSNR  241 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~  241 (348)
                             |.+.|+.+|.++|.+++.++++++++++++||+++|||+..... .. +...+.....+....+. .+   .+
T Consensus       158 -------p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~-~g---~g  226 (335)
T 1rpn_A          158 -------PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELR-LG---NV  226 (335)
T ss_dssp             -------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEE-ES---CT
T ss_pred             -------CCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEE-eC---CC
Confidence                   66789999999999999999888999999999999999865431 11 12233344455433222 22   34


Q ss_pred             CCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCC-CCcccCC--CCC--CCccccChHHH
Q 035965          242 MGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSK-MQTFEGE--NQS--SVPSVISSEKL  315 (348)
Q Consensus       242 ~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~-~~~~~~~--~~~--~~~~~~~~~~~  315 (348)
                      ++.++|||++|+|++++.+++++. ++.||++ ++++|+.|+++.+.+.+|... .......  ..+  .....+|++|+
T Consensus       227 ~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  305 (335)
T 1rpn_A          227 DAKRDWGFAGDYVEAMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKA  305 (335)
T ss_dssp             TCEEECEEHHHHHHHHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHH
T ss_pred             cceeceEEHHHHHHHHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHH
Confidence            478999999999999999998875 4789875 558999999999999998621 0111111  111  34567899999


Q ss_pred             H-HcCCccccChhHHHHHHHHHHHHc
Q 035965          316 K-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       316 ~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      + +|||+|+++++|+|+++++|++++
T Consensus       306 ~~~lG~~p~~~l~e~l~~~~~~~~~~  331 (335)
T 1rpn_A          306 QRVLGWKPRTSLDELIRMMVEADLRR  331 (335)
T ss_dssp             HHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             HHhcCCCcCCCHHHHHHHHHHHHHHh
Confidence            9 799999999999999999999864

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=2e-44  Score=325.55  Aligned_cols=299  Identities=20%  Similarity=0.240  Sum_probs=231.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHC---C---CeEEEEEcCCCcc---ccccccCCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLER---G---YIVHATVRDPGKL---QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~---g---~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      |+|||||||||||++|+++|+++   |   ++|++++|.....   .+... ....+++++.+|++|.+++.+++.++|+
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   79 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLARELRGVDA   79 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhc-ccCCCeEEEEcCCCCHHHHHHHhcCCCE
Confidence            47999999999999999999997   8   9999999965321   12111 1124789999999999999999999999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI  162 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~  162 (348)
                      |||+|+.........+     + ..++++|+.++.+++++|.+.+ +++|||+||.++|+....     .+++|+++.. 
T Consensus        80 Vih~A~~~~~~~~~~~-----~-~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~~-----~~~~E~~~~~-  146 (337)
T 1r6d_A           80 IVHFAAESHVDRSIAG-----A-SVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDS-----GSWTESSPLE-  146 (337)
T ss_dssp             EEECCSCCCHHHHHHC-----C-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSS-----SCBCTTSCCC-
T ss_pred             EEECCCccCchhhhhC-----H-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCCC-----CCCCCCCCCC-
Confidence            9999997653221122     3 3789999999999999999988 889999999987654322     4778877543 


Q ss_pred             chhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCccccccccccC
Q 035965          163 HHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSILSSVSNR  241 (348)
Q Consensus       163 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  241 (348)
                              |.+.|+.+|.++|.+++.++++++++++++||+++|||+....  ..+. .+.....+....+  .+   .+
T Consensus       147 --------~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~--~~---~~  211 (337)
T 1r6d_A          147 --------PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPL--YG---DG  211 (337)
T ss_dssp             --------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT--SHHHHHHHHHHTTCCEEE--ET---TS
T ss_pred             --------CCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC--ChHHHHHHHHhcCCCcEE--eC---CC
Confidence                    6678999999999999999988899999999999999986532  2332 3334444543222  22   33


Q ss_pred             CCCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCC-cccCCCCC--CCccccChHHHH-
Q 035965          242 MGSIALVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQ-TFEGENQS--SVPSVISSEKLK-  316 (348)
Q Consensus       242 ~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~-  316 (348)
                      .+.++|+|++|+|++++.+++++..++.||+++ +++|+.|+++.+.+.+|.. .+ ..+....+  .....+|++|++ 
T Consensus       212 ~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~d~~k~~~  290 (337)
T 1r6d_A          212 ANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGAD-WSSVRKVADRKGHDLRYSLDGGKIER  290 (337)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCC-GGGEEEECCCTTCCCBCCBCCHHHHH
T ss_pred             CeeEeeEeHHHHHHHHHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCC-cccceecCCCCCCcceeecCHHHHHH
Confidence            478899999999999999998766677898865 5899999999999998863 22 11111111  234568999998 


Q ss_pred             HcCCccccChhHHHHHHHHHHHHc
Q 035965          317 DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       317 ~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      .|||+|+++++|+|+++++|++++
T Consensus       291 ~lG~~p~~~~~e~l~~~~~~~~~~  314 (337)
T 1r6d_A          291 ELGYRPQVSFADGLARTVRWYREN  314 (337)
T ss_dssp             HHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             HcCCCCCCCHHHHHHHHHHHHHhc
Confidence            799999999999999999999864

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=1.5e-45  Score=329.36  Aligned_cols=296  Identities=14%  Similarity=0.141  Sum_probs=230.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~   86 (348)
                      +|+|||||||||||++|+++|+++  |++|++++|+..+....      ++++++.+|++|.+++.++++  ++|+|||+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~   75 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVV------NSGPFEVVNALDFNQIEHLVEVHKITDIYLM   75 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHH------HSSCEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccccc------CCCceEEecCCCHHHHHHHHhhcCCCEEEEC
Confidence            578999999999999999999999  89999999976543211      257889999999999999988  89999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      |+...... ..+     + ..++++|+.++.+++++|++.+ +++|||+||.++|+....    ..+.+|+.+..     
T Consensus        76 a~~~~~~~-~~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~----~~~~~e~~~~~-----  138 (312)
T 2yy7_A           76 AALLSATA-EKN-----P-AFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTP----KENTPQYTIME-----  138 (312)
T ss_dssp             CCCCHHHH-HHC-----H-HHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTSC----SSSBCSSCBCC-----
T ss_pred             CccCCCch-hhC-----h-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCCC----CCCccccCcCC-----
Confidence            99754321 122     3 4789999999999999999988 889999999987765433    24677776543     


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC---CchHHHHHhhhcCCCCccccccccccCCC
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV---PSSIQVLLSPITGDSKFFSILSSVSNRMG  243 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (348)
                          |.+.|+.+|.++|.+++.++++++++++++||+++|||...+..   ......+.+.+.+....+  .+   .+++
T Consensus       139 ----~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~  209 (312)
T 2yy7_A          139 ----PSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYEC--FL---SSET  209 (312)
T ss_dssp             ----CCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEE--SS---CTTC
T ss_pred             ----CCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEE--ec---CCCc
Confidence                67789999999999999998888999999999999998754321   223344444444443221  22   2347


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCC----CceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCC---CCCCccccChHHHH
Q 035965          244 SIALVHIEDICNAHIFLMENDRA----QGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGEN---QSSVPSVISSEKLK  316 (348)
Q Consensus       244 ~r~~i~v~D~a~~~~~~~~~~~~----~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  316 (348)
                      .++|+|++|+|++++.+++++..    ++.||++++.+|+.|+++.+.+.+|...++......   .......+|++|++
T Consensus       210 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~  289 (312)
T 2yy7_A          210 KMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQAR  289 (312)
T ss_dssp             CEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCTTCEEEECCCTHHHHHTTSCSSBCCHHHH
T ss_pred             eeeeeeHHHHHHHHHHHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCCCCceEeccCccccccccccccCCHHHHH
Confidence            89999999999999999988653    378998878999999999999999853333211100   00234578999999


Q ss_pred             -HcCCccccChhHHHHHHHHHHH
Q 035965          317 -DLGFNYKHGIEDIICQTIASCV  338 (348)
Q Consensus       317 -~LG~~p~~~~~e~l~~~~~~~~  338 (348)
                       +|||+|+++++|+|+++++|++
T Consensus       290 ~~lG~~p~~~l~~~l~~~~~~~k  312 (312)
T 2yy7_A          290 EDWDWKHTFDLESMTKDMIEHLS  312 (312)
T ss_dssp             HHHCCCCCCCHHHHHHHHHHHHC
T ss_pred             HHcCCCCCCCHHHHHHHHHHHhC
Confidence             7999999999999999999984

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=7e-45  Score=324.98  Aligned_cols=302  Identities=20%  Similarity=0.194  Sum_probs=228.5

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAAS   89 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~~   89 (348)
                      |+||||||+||||++|+++|+++|++|++++|...... ...   ..+++++.+|++|.+++.++++  ++|+|||+|+.
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~-~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~   76 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR-ENV---PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQ   76 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG-GGS---CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch-hhc---ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccc
Confidence            47999999999999999999999999999998543221 111   1367889999999999998887  89999999997


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccc-eeeeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSV-STITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~-~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      ........+     + ...+++|+.++.+++++|++.+ +++|||+||. ++|+....    ..+++|+++..       
T Consensus        77 ~~~~~~~~~-----~-~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~~----~~~~~E~~~~~-------  138 (311)
T 2p5y_A           77 ASVKVSVED-----P-VLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVPE----GERAEETWPPR-------  138 (311)
T ss_dssp             CCHHHHHHC-----H-HHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCCT----TCCBCTTSCCC-------
T ss_pred             cCchhhhhC-----H-HHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCCC----CCCcCCCCCCC-------
Confidence            543221122     3 3789999999999999999888 8899999998 64443122    24778877543       


Q ss_pred             CCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC-CchHHH-HHhhhcCCCCccccccccccCCCCcc
Q 035965          169 KASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV-PSSIQV-LLSPITGDSKFFSILSSVSNRMGSIA  246 (348)
Q Consensus       169 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~  246 (348)
                        |.+.|+.+|.++|.+++.++++++++++++||++||||+..... ...+.. +.+...+.+..+......+.+.+.|+
T Consensus       139 --~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  216 (311)
T 2p5y_A          139 --PKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRD  216 (311)
T ss_dssp             --CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEEC
T ss_pred             --CCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEe
Confidence              66789999999999999998888999999999999999875432 122322 33344444322110000013347899


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCC--CCCccccChHHHHHcCCccc
Q 035965          247 LVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQ--SSVPSVISSEKLKDLGFNYK  323 (348)
Q Consensus       247 ~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~LG~~p~  323 (348)
                      |+|++|+|++++.+++++  ++.||++ ++.+|+.|+++.+.+.+|. +.+....+..  ......+|++|+++|||+|+
T Consensus       217 ~i~v~Dva~a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~  293 (311)
T 2p5y_A          217 YVYVGDVAEAHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGK-APEVQPAPPRPGDLERSVLSPLKLMAHGWRPK  293 (311)
T ss_dssp             EEEHHHHHHHHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTC-CCCEEEECCCTTCCSBCCBCCHHHHTTTCCCS
T ss_pred             eEEHHHHHHHHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCC-CCCceeCCCCccchhhccCCHHHHHHCCCCCC
Confidence            999999999999999875  6789875 5689999999999999886 3332221111  13467789999988999999


Q ss_pred             cChhHHHHHHHHHHHHc
Q 035965          324 HGIEDIICQTIASCVDC  340 (348)
Q Consensus       324 ~~~~e~l~~~~~~~~~~  340 (348)
                      ++++|+|+++++|++++
T Consensus       294 ~~~~~~l~~~~~~~~~~  310 (311)
T 2p5y_A          294 VGFQEGIRLTVDHFRGA  310 (311)
T ss_dssp             SCHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHHHhh
Confidence            99999999999999753

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=1.1e-44  Score=324.97  Aligned_cols=291  Identities=17%  Similarity=0.125  Sum_probs=224.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc----c-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK----L-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~----~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      +++|+|||||||||||++|+++|+++|++|++++|+...    . ..... ...++++++.+|+.          ++|+|
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~----------~~d~v   73 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKF-LEKPVLELEERDLS----------DVRLV   73 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEE-ECSCGGGCCHHHHT----------TEEEE
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhh-ccCCCeeEEeCccc----------cCCEE
Confidence            457899999999999999999999999999999997652    1 11111 11234556666655          78999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      ||+|+..........     +. ..++ |+.++.+++++|++.+ +++|||+||.++|+....     .+++|+++..  
T Consensus        74 i~~a~~~~~~~~~~~-----~~-~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~-----~~~~E~~~~~--  138 (321)
T 3vps_A           74 YHLASHKSVPRSFKQ-----PL-DYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADT-----LPTPEDSPLS--  138 (321)
T ss_dssp             EECCCCCCHHHHTTS-----TT-TTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSS-----SSBCTTSCCC--
T ss_pred             EECCccCChHHHHhC-----HH-HHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCC-----CCCCCCCCCC--
Confidence            999998765333333     43 5666 9999999999999998 899999999997665433     5888887654  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhCCC-cEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCccccccccccC
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANENKI-DLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSILSSVSNR  241 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~-~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  241 (348)
                             |.+.|+.+|.++|.+++.+++++++ +++++||+++|||+....  ..+. ++.....+....+  .+   .+
T Consensus       139 -------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~--~~---~~  204 (321)
T 3vps_A          139 -------PRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD--ALVPRLCANLLTRNELPV--EG---DG  204 (321)
T ss_dssp             -------CCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTT--SHHHHHHHHHHHHSEEEE--ET---TS
T ss_pred             -------CCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCC--ChHHHHHHHHHcCCCeEE--eC---CC
Confidence                   6789999999999999999998999 999999999999987652  2333 3334444443222  22   34


Q ss_pred             CCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCC--CCCccccChHHHH-H
Q 035965          242 MGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQ--SSVPSVISSEKLK-D  317 (348)
Q Consensus       242 ~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~  317 (348)
                      ++.++|||++|+|++++.+++++..+ .||++ ++.+|+.|+++.+. .+|. +.+....+..  ......+|++|++ .
T Consensus       205 ~~~~~~v~v~Dva~~~~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~  281 (321)
T 3vps_A          205 EQRRDFTYITDVVDKLVALANRPLPS-VVNFGSGQSLSVNDVIRILQ-ATSP-AAEVARKQPRPNEITEFRADTALQTRQ  281 (321)
T ss_dssp             CCEECEEEHHHHHHHHHHGGGSCCCS-EEEESCSCCEEHHHHHHHHH-TTCT-TCEEEEECCCTTCCSBCCBCCHHHHHH
T ss_pred             CceEceEEHHHHHHHHHHHHhcCCCC-eEEecCCCcccHHHHHHHHH-HhCC-CCccccCCCCCCCcceeeccHHHHHHH
Confidence            47899999999999999999998775 99886 56899999999999 8886 3333221111  1567889999999 7


Q ss_pred             cCCcc-ccChhHHHHHHHHHHHHcCC
Q 035965          318 LGFNY-KHGIEDIICQTIASCVDCGF  342 (348)
Q Consensus       318 LG~~p-~~~~~e~l~~~~~~~~~~~~  342 (348)
                      |||+| +.+++|+|+++++|+++++.
T Consensus       282 lG~~p~~~~~~~~l~~~~~~~~~~~~  307 (321)
T 3vps_A          282 IGERSGGIGIEEGIRLTLEWWQSRDL  307 (321)
T ss_dssp             HCCCSCCCCHHHHHHHHHHHHHTSCT
T ss_pred             hCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence            99999 77999999999999998765

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=1.9e-44  Score=318.32  Aligned_cols=274  Identities=14%  Similarity=0.081  Sum_probs=218.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcC-CCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMG-CDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~d~Vih~a   87 (348)
                      |+||+||||| +||||++|+++|+++|++|++++|+..+.        .++++++.+|++|.+++.+++++ +|+|||+|
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a   71 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM--------PAGVQTLIADVTRPDTLASIVHLRPEILVYCV   71 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC--------CTTCCEEECCTTCGGGCTTGGGGCCSEEEECH
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc--------ccCCceEEccCCChHHHHHhhcCCCCEEEEeC
Confidence            3467999999 59999999999999999999999986541        24789999999999999998887 99999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      +....     +     + ..++++|+.++.+++++|++.+ +++|||+||.++|+...     ..+++|+++..      
T Consensus        72 ~~~~~-----~-----~-~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~-----~~~~~E~~~~~------  128 (286)
T 3gpi_A           72 AASEY-----S-----D-EHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQEV-----EEWLDEDTPPI------  128 (286)
T ss_dssp             HHHHH-----C-----------CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCCC-----SSEECTTSCCC------
T ss_pred             CCCCC-----C-----H-HHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCCC-----CCCCCCCCCCC------
Confidence            86321     1     2 3788999999999999999887 89999999998765443     35888988654      


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcce
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIAL  247 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  247 (348)
                         |.+.|+.+|.++|.+ +.+     ++++++||+++|||+...    +   +.....  . ..  .   ..+++.++|
T Consensus       129 ---p~~~Y~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~~----~---~~~~~~--~-~~--~---~~~~~~~~~  184 (286)
T 3gpi_A          129 ---AKDFSGKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRLR----M---IRQAQT--P-EQ--W---PARNAWTNR  184 (286)
T ss_dssp             ---CCSHHHHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBCH----H---HHHTTC--G-GG--S---CSSBCEECE
T ss_pred             ---CCChhhHHHHHHHHH-Hhc-----CCeEEEecccccCCCchh----H---HHHHHh--c-cc--C---CCcCceeEE
Confidence               778999999999998 553     899999999999997641    1   222222  1 11  1   234578899


Q ss_pred             eeHHHHHHHHHHhhcC---CCCCceEEEec-cCcChHHHHHHHHHhCCCCCCCcccCCCCCCCccccChHHHHHcCCccc
Q 035965          248 VHIEDICNAHIFLMEN---DRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLKDLGFNYK  323 (348)
Q Consensus       248 i~v~D~a~~~~~~~~~---~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~  323 (348)
                      ||++|+|++++.++++   ...+++||+++ +++|+.|+++.+.+.+|. +.+..... .......+|++|+++|||+|+
T Consensus       185 i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~-~~~~~~~~d~~k~~~lG~~p~  262 (286)
T 3gpi_A          185 IHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGI-AYPAGATP-PVQGNKKLSNARLLASGYQLI  262 (286)
T ss_dssp             EEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTC-CCCCSCCC-CBCSSCEECCHHHHHTTCCCS
T ss_pred             EEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCC-CCCCCCCc-ccCCCeEeeHHHHHHcCCCCc
Confidence            9999999999999998   45677898864 689999999999999986 44433322 225678899999999999999


Q ss_pred             c-ChhHHHHHHHHHHHHc
Q 035965          324 H-GIEDIICQTIASCVDC  340 (348)
Q Consensus       324 ~-~~~e~l~~~~~~~~~~  340 (348)
                      + +++|+|+++++|+...
T Consensus       263 ~~~l~e~l~~~~~~~~~~  280 (286)
T 3gpi_A          263 YPDYVSGYGALLAAMREG  280 (286)
T ss_dssp             SCSHHHHHHHHHHHHTC-
T ss_pred             CCcHHHHHHHHHHHHhcc
Confidence            9 7999999999999643

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=4.7e-44  Score=330.29  Aligned_cols=313  Identities=19%  Similarity=0.207  Sum_probs=233.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHH-HCCCeEEEEEcCCCc---------c-ccc----cccCC--CCC---eEEEEccCCCc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLL-ERGYIVHATVRDPGK---------L-QIF----SKWTR--SDR---LRLFQADLQVE   70 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~-~~g~~V~~~~r~~~~---------~-~~~----~~~~~--~~~---~~~~~~Dl~d~   70 (348)
                      +|+|||||||||||++|+++|+ ++|++|++++|....         . .+.    .....  ..+   ++++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3589999999999999999999 999999999997543         1 110    00000  124   88999999999


Q ss_pred             chHHHhhc--C-CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCC
Q 035965           71 GSFDKAVM--G-CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSS  147 (348)
Q Consensus        71 ~~~~~~~~--~-~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~  147 (348)
                      +++.++++  + +|+|||+|+.........+     + ..++++|+.++.+++++|++.+ +++|||+||.++|+.....
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~-----~-~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~  154 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRD-----P-LKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMG  154 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHC-----H-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhh-----H-HHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCcc
Confidence            99998887  6 9999999997654321122     3 3789999999999999999888 8899999998876543310


Q ss_pred             --CCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC-------CCchH
Q 035965          148 --GEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS-------VPSSI  218 (348)
Q Consensus       148 --~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-------~~~~~  218 (348)
                        .....+++|+++..         |.+.|+.+|.++|.+++.++++++++++++||++||||+....       ...++
T Consensus       155 ~~~~~~~~~~E~~~~~---------p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~  225 (397)
T 1gy8_A          155 SVSTNAEPIDINAKKS---------PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLI  225 (397)
T ss_dssp             ----CCCCBCTTSCCB---------CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHH
T ss_pred             cccccccCcCccCCCC---------CCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHH
Confidence              00014778877643         6678999999999999999988899999999999999975311       12344


Q ss_pred             HHHH-----hhhcCCC----------Cccccccc---cccCCCCcceeeHHHHHHHHHHhhcCCCC-C--------ceEE
Q 035965          219 QVLL-----SPITGDS----------KFFSILSS---VSNRMGSIALVHIEDICNAHIFLMENDRA-Q--------GQYI  271 (348)
Q Consensus       219 ~~~~-----~~~~~~~----------~~~~~~~~---~~~~~~~r~~i~v~D~a~~~~~~~~~~~~-~--------~~y~  271 (348)
                      ..+.     +...+..          ..+.+.|.   ...+.+.|+|||++|+|++++.+++++.. +        ++||
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~n  305 (397)
T 1gy8_A          226 PIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFN  305 (397)
T ss_dssp             HHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEE
T ss_pred             HHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEE
Confidence            4443     4444542          23333331   11345889999999999999999986432 2        6898


Q ss_pred             Ee-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccChHHHH-HcCCcccc-ChhHHHHHHHHHHHHc
Q 035965          272 CC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISSEKLK-DLGFNYKH-GIEDIICQTIASCVDC  340 (348)
Q Consensus       272 ~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~LG~~p~~-~~~e~l~~~~~~~~~~  340 (348)
                      ++ ++++|+.|+++.+.+.+|. +.+....+...  .....+|++|++ .|||+|++ +++|+|+++++|++++
T Consensus       306 i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~  378 (397)
T 1gy8_A          306 LGTSRGYSVREVIEVARKTTGH-PIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (397)
T ss_dssp             ESCSCCEEHHHHHHHHHHHHCC-CCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             eCCCCcccHHHHHHHHHHHhCC-CCCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence            85 5699999999999999886 44432222111  346788999998 89999999 9999999999999876

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=7.1e-44  Score=322.11  Aligned_cols=308  Identities=16%  Similarity=0.166  Sum_probs=228.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccC-CCCCeEEEEccCCCcchHHHhhc--CCCEEEEc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWT-RSDRLRLFQADLQVEGSFDKAVM--GCDGVFHV   86 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~   86 (348)
                      |+||||||+||||++|+++|+++|++|++++|.....  ....+.. ...+++++.+|++|.+++.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            4799999999999999999999999999998754321  1111000 02357889999999999988886  59999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      |+.........+     + ..++++|+.++.++++++++.+ +++|||+||.++|+.. .    ..+++|+.+..     
T Consensus        81 A~~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~-~----~~~~~e~~~~~-----  143 (338)
T 1udb_A           81 AGLKAVGESVQK-----P-LEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDN-P----KIPYVESFPTG-----  143 (338)
T ss_dssp             CSCCCHHHHHHC-----H-HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSC-C----SSSBCTTSCCC-----
T ss_pred             CccCccccchhc-----H-HHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCC-C----CCCcCcccCCC-----
Confidence            997543221122     3 3688999999999999999887 8899999999866533 2    25777876532     


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHhC-CCcEEEEecCccccCCCC------CC--CCchHHHHHhhhcCCCCccccccc
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANEN-KIDLVSVITTTVAGPFLT------SS--VPSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~v~G~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                         ++.+.|+.+|.++|.+++.+++++ +++++++||+++|||...      ..  ...+...+.+...+....+...+.
T Consensus       144 ---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  220 (338)
T 1udb_A          144 ---TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGN  220 (338)
T ss_dssp             ---CCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECS
T ss_pred             ---CCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecC
Confidence               135789999999999999998876 899999999999998531      11  123444444544443333333321


Q ss_pred             ---cccCCCCcceeeHHHHHHHHHHhhcCC--CCC-ceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCcc
Q 035965          238 ---VSNRMGSIALVHIEDICNAHIFLMEND--RAQ-GQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPS  308 (348)
Q Consensus       238 ---~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~-~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~  308 (348)
                         ...+.+.|+|||++|+|++++.+++++  ..+ ++||++ ++++|+.|+++.+.+.+|. +++.......+  ....
T Consensus       221 ~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~  299 (338)
T 1udb_A          221 DYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAY  299 (338)
T ss_dssp             CSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTS-CCCEEEECCCTTCCSBC
T ss_pred             cccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCC-CCcceeCCCCCCchhhh
Confidence               123557899999999999999998763  233 579885 5689999999999999885 44432221111  3456


Q ss_pred             ccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          309 VISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       309 ~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      .+|++|++ +|||+|+++++|+|+++++|++++
T Consensus       300 ~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~  332 (338)
T 1udb_A          300 WADASKADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_dssp             CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             hcCHHHHHHHcCCCcCCCHHHHHHHHHHHHHhc
Confidence            78999998 899999999999999999999875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.9e-43  Score=319.78  Aligned_cols=295  Identities=18%  Similarity=0.250  Sum_probs=225.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ++|+|||||||||||++|+++|+++|++|++++|++.+. .+..     .+++++.+|++|.+++.++++++|+|||+|+
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~   86 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY-----LEPECRVAEMLDHAGLERALRGLDGVIFSAG   86 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG-----GCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc-----CCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            346999999999999999999999999999999987654 2221     2688999999999999999999999999999


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      ......  .+     + ..++++|+.++.+++++|.+.+ +++|||+||.++|+.....   ..+ +|+++..       
T Consensus        87 ~~~~~~--~~-----~-~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~---~~~-~E~~~~~-------  146 (342)
T 2x4g_A           87 YYPSRP--RR-----W-QEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQG---LPG-HEGLFYD-------  146 (342)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTS---SCB-CTTCCCS-------
T ss_pred             cCcCCC--CC-----H-HHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCC---CCC-CCCCCCC-------
Confidence            654211  22     3 4789999999999999999988 8999999999877654331   134 7777654       


Q ss_pred             CCC----cchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCC-CCCCCchHHHHHhhhcCCCCccccccccccCCC
Q 035965          169 KAS----GWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFL-TSSVPSSIQVLLSPITGDSKFFSILSSVSNRMG  243 (348)
Q Consensus       169 ~~~----~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (348)
                        |    .+.|+.+|.++|.+++.+++. +++++++||+++|||+. ...   ....+.....+....+        +++
T Consensus       147 --p~~~~~~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~--------~~~  212 (342)
T 2x4g_A          147 --SLPSGKSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPT---TGRVITAIGNGEMTHY--------VAG  212 (342)
T ss_dssp             --SCCTTSCHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCS---TTHHHHHHHTTCCCEE--------ECC
T ss_pred             --ccccccChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCcccc---HHHHHHHHHcCCCccc--------cCC
Confidence              4    678999999999999999887 99999999999999986 321   2222334444443322        235


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCC---CCccc---------------C-----
Q 035965          244 SIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSK---MQTFE---------------G-----  300 (348)
Q Consensus       244 ~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~---~~~~~---------------~-----  300 (348)
                      .++|+|++|+|++++.+++++..++.||+++..+|+.|+++.+.+.+|...   +|...               +     
T Consensus       213 ~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  292 (342)
T 2x4g_A          213 QRNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLL  292 (342)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHSCTTCEEEECCEEEEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC-----------
T ss_pred             CcceeeHHHHHHHHHHHHhCCCCCceEEEcCCcccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCC
Confidence            778999999999999999887667789875433999999999999987521   12110               0     


Q ss_pred             --C-CCC-CCccccChHHHH-HcCC-ccccChhHHHHHHHHHHHHcCCCC
Q 035965          301 --E-NQS-SVPSVISSEKLK-DLGF-NYKHGIEDIICQTIASCVDCGFLP  344 (348)
Q Consensus       301 --~-~~~-~~~~~~~~~~~~-~LG~-~p~~~~~e~l~~~~~~~~~~~~~~  344 (348)
                        . ... .....+|+++++ .||| +| .+++|+|+++++|+++++.++
T Consensus       293 ~~~~~~~~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g~~~  341 (342)
T 2x4g_A          293 DETAIEVMAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDNGYFN  341 (342)
T ss_dssp             -----CCTTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTTCCC
T ss_pred             CHHHHHHHhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcCCCC
Confidence              0 000 246778999999 7999 99 699999999999999999875

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.7e-44  Score=323.01  Aligned_cols=296  Identities=16%  Similarity=0.076  Sum_probs=224.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih   85 (348)
                      .++||+|||||||||||++|+++|+++|+      +...  ..       ..++++.+|++|.+++.+++++  +|+|||
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~--~~-------~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih   67 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE--DW-------VFVSSKDADLTDTAQTRALFEKVQPTHVIH   67 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC--EE-------EECCTTTCCTTSHHHHHHHHHHSCCSEEEE
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc--cc-------cccCceecccCCHHHHHHHHhhcCCCEEEE
Confidence            46688999999999999999999999998      2111  11       1344567999999999999886  999999


Q ss_pred             ccccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           86 VAASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        86 ~a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      +|+..... ....+     + ..++++|+.++.+++++|++.+ +++|||+||.++|+...     ..+++|+++.... 
T Consensus        68 ~A~~~~~~~~~~~~-----~-~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~~~-----~~~~~E~~~~~~~-  134 (319)
T 4b8w_A           68 LAAMVGGLFRNIKY-----N-LDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPDKT-----TYPIDETMIHNGP-  134 (319)
T ss_dssp             CCCCCCCHHHHTTC-----H-HHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCSSC-----CSSBCGGGGGBSC-
T ss_pred             CceecccccccccC-----H-HHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCCCC-----CCCccccccccCC-
Confidence            99985421 11122     3 3789999999999999999998 89999999998665433     2578887632100 


Q ss_pred             hhccCCCcc-hhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC--CchHHHHH-h----hhcCCCCcccccc
Q 035965          165 VWNKKASGW-VYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV--PSSIQVLL-S----PITGDSKFFSILS  236 (348)
Q Consensus       165 ~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~-~----~~~~~~~~~~~~~  236 (348)
                          ..|.+ .|+.+|.++|.+++.++++++++++++||++||||+.....  ...+..+. +    ...+....+  .+
T Consensus       135 ----~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  208 (319)
T 4b8w_A          135 ----PHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTV--WG  208 (319)
T ss_dssp             ----CCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEE--ES
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEE--eC
Confidence                11334 69999999999999999888999999999999999876431  22332222 2    344544322  23


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCCC--CceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccC
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDRA--QGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVIS  311 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~  311 (348)
                         .+.+.|+|||++|+|++++.+++++..  ++.||++ ++.+|+.|+++.+.+.+|. +.+....+..+  .....+|
T Consensus       209 ---~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d  284 (319)
T 4b8w_A          209 ---TGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDF-HGEVTFDTTKSDGQFKKTAS  284 (319)
T ss_dssp             ---CSCCEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTC-CSCEEEETTSCCCCSCCCBC
T ss_pred             ---CCCeeEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCC-CCcEEeCCCCCcCcccccCC
Confidence               344789999999999999999987543  4578775 5799999999999999986 43333322221  4456799


Q ss_pred             hHHHH-HcCCccccChhHHHHHHHHHHHHcC
Q 035965          312 SEKLK-DLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       312 ~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      ++|++ .|||.|.++++|+|+++++|++++.
T Consensus       285 ~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~  315 (319)
T 4b8w_A          285 NSKLRTYLPDFRFTPFKQAVKETCAWFTDNY  315 (319)
T ss_dssp             CHHHHHHCTTCCCCCHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence            99999 7999999999999999999998764

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-44  Score=326.03  Aligned_cols=309  Identities=15%  Similarity=0.125  Sum_probs=226.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---ccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVFH   85 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih   85 (348)
                      ||+|||||||||||++|+++|+++|++|++++|.....   ....+. ..++++++.+|++|.+++.+++++  +|+|||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKYMPDSCFH   79 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhc-cCCceEEEEcCCCCHHHHHHHHhccCCCEEEE
Confidence            47899999999999999999999999999999853211   111111 123688999999999999999887  999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcc-eEEEeccceeeeecCCCC-----------CCCCc
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK-RVVLTSSVSTITAKDSSG-----------EWRPV  153 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~v~~SS~~~~~~~~~~~-----------~~~~~  153 (348)
                      +|+.........+     + ..++++|+.++.+++++|++.+ ++ +|||+||.++|+......           ....+
T Consensus        80 ~A~~~~~~~~~~~-----~-~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~  152 (347)
T 1orr_A           80 LAGQVAMTTSIDN-----P-CMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNG  152 (347)
T ss_dssp             CCCCCCHHHHHHC-----H-HHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTC
T ss_pred             CCcccChhhhhhC-----H-HHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcCCcccccccccccccccC
Confidence            9997543221122     3 3789999999999999999988 54 999999998765432200           00012


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC-CchHH-HHHhhhcCCC--
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV-PSSIQ-VLLSPITGDS--  229 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~-~~~~~-~~~~~~~~~~--  229 (348)
                      ++|+.+.         .|.+.|+.+|.++|.+++.++++++++++++||++||||+..... ...+. ++.+.+.+..  
T Consensus       153 ~~e~~~~---------~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (347)
T 1orr_A          153 YDESTQL---------DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGI  223 (347)
T ss_dssp             BCTTSCC---------CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTC
T ss_pred             ccccCCC---------CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccC
Confidence            3444332         266789999999999999998888999999999999999865421 11222 2333333331  


Q ss_pred             -CccccccccccCCCCcceeeHHHHHHHHHHhhcCC--CCCceEEEecc---CcChHHHHHHHHHhCCCCCCCcccCCCC
Q 035965          230 -KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQYICCVK---SCPISEFIDHLKLEYPSSKMQTFEGENQ  303 (348)
Q Consensus       230 -~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~y~~~~~---~~s~~el~~~i~~~~~~~~~~~~~~~~~  303 (348)
                       ..+...+   .+++.|+|+|++|+|++++.+++++  ..++.|++++.   ++|+.|+++.+.+.+|. +.+....+..
T Consensus       224 ~~~~~~~g---~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~  299 (347)
T 1orr_A          224 NKPFTISG---NGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI-DMRFTNLPVR  299 (347)
T ss_dssp             CCCEEEES---SSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTC-CCCEEEECCC
T ss_pred             CCCeEEec---CCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCC-CCCceeCCCC
Confidence             0222222   3458899999999999999999862  23558988654   49999999999999986 3332221111


Q ss_pred             C--CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          304 S--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       304 ~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      +  .....+|++|++ .|||+|+++++|+|+++++|+++.
T Consensus       300 ~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  339 (347)
T 1orr_A          300 ESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI  339 (347)
T ss_dssp             SSCCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             CCCcceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHH
Confidence            1  345678999998 899999889999999999999874

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=1.4e-43  Score=321.00  Aligned_cols=307  Identities=17%  Similarity=0.231  Sum_probs=230.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCc-chHHHhhcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVE-GSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~d~Vih~a~   88 (348)
                      |+|||||||||||++|+++|+++ |++|++++|+..+. .+.    ...+++++.+|++|. +.+.++++++|+|||+|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~   76 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----TCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh----cCCCeEEEeccccCcHHHHHhhccCCCEEEEccc
Confidence            58999999999999999999998 89999999987644 221    124789999999985 467788889999999999


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      .........+     + ..++++|+.++.+++++|++.+  ++|||+||.++|+....     .+++|+++.....  +.
T Consensus        77 ~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~~-----~~~~e~~~~~~~~--~~  141 (345)
T 2bll_A           77 IATPIEYTRN-----P-LRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSD-----KYFDEDHSNLIVG--PV  141 (345)
T ss_dssp             CCCHHHHHHS-----H-HHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCC-----SSBCTTTCCCBCC--CT
T ss_pred             ccCccchhcC-----H-HHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCCC-----CCcCCcccccccC--cc
Confidence            7654322222     3 3788999999999999999887  79999999986654332     4678876532110  11


Q ss_pred             CCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC------CCchH-HHHHhhhcCCCCccccccccccC
Q 035965          169 KASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS------VPSSI-QVLLSPITGDSKFFSILSSVSNR  241 (348)
Q Consensus       169 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  241 (348)
                      ..|.+.|+.+|.++|.+++.++++++++++++||++||||+....      ....+ ..+.....+....+  .+   .+
T Consensus       142 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~g  216 (345)
T 2bll_A          142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL--ID---GG  216 (345)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEE--GG---GS
T ss_pred             cCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEE--EC---CC
Confidence            135678999999999999999888899999999999999986531      11122 23344555554322  22   33


Q ss_pred             CCCcceeeHHHHHHHHHHhhcCCC---CCceEEEec-c-CcChHHHHHHHHHhCCCCCCCcccCCC--------------
Q 035965          242 MGSIALVHIEDICNAHIFLMENDR---AQGQYICCV-K-SCPISEFIDHLKLEYPSSKMQTFEGEN--------------  302 (348)
Q Consensus       242 ~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~-~-~~s~~el~~~i~~~~~~~~~~~~~~~~--------------  302 (348)
                      ++.++|+|++|+|++++.+++++.   .++.||+++ + .+|+.|+++.+.+.+|...........              
T Consensus       217 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  296 (345)
T 2bll_A          217 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGK  296 (345)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC--------
T ss_pred             CEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccc
Confidence            478999999999999999998763   356898865 3 799999999999988752211111100              


Q ss_pred             --CCCCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcCC
Q 035965          303 --QSSVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCGF  342 (348)
Q Consensus       303 --~~~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~~  342 (348)
                        .......+|++|++ +|||+|+++++++|+++++|++++.-
T Consensus       297 ~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~  339 (345)
T 2bll_A          297 GYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD  339 (345)
T ss_dssp             ----CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred             cccchhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcCC
Confidence              01245678999998 89999999999999999999987644

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=1.7e-43  Score=327.32  Aligned_cols=315  Identities=14%  Similarity=0.102  Sum_probs=226.7

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-c-----------------cccc-cCCCCCeEEEEccC
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-Q-----------------IFSK-WTRSDRLRLFQADL   67 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~-----------------~~~~-~~~~~~~~~~~~Dl   67 (348)
                      ....|++|||||||||||++|+++|+++|++|++++|..... .                 .... .....+++++.+|+
T Consensus         7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl   86 (404)
T 1i24_A            7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI   86 (404)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred             cccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence            345688999999999999999999999999999999854321 0                 0000 00124689999999


Q ss_pred             CCcchHHHhhcC--CCEEEEccccCccccccccccccchh--hhhhhhhHHHHHHHHHHHhhcCCc-ceEEEeccceeee
Q 035965           68 QVEGSFDKAVMG--CDGVFHVAASMEFDINVKDNIETYVQ--STVINPAIQSTLNLLKACLKSESV-KRVVLTSSVSTIT  142 (348)
Q Consensus        68 ~d~~~~~~~~~~--~d~Vih~a~~~~~~~~~~~~~~~~~~--~~~~~~nv~~~~~ll~~~~~~~~~-~~~v~~SS~~~~~  142 (348)
                      +|.+++.+++++  +|+|||+||.........+     +.  ..++++|+.++.+++++|++.+ . ++|||+||.++|+
T Consensus        87 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~-----~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg  160 (404)
T 1i24_A           87 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMID-----RSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYG  160 (404)
T ss_dssp             TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSC-----HHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGC
T ss_pred             CCHHHHHHHHhccCCCEEEECCCCCCccchhhC-----ccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhC
Confidence            999999998887  9999999997644322222     21  2478999999999999999887 5 5999999998665


Q ss_pred             ecCCCCCCCCcccCCCCCCcc-----hhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC----
Q 035965          143 AKDSSGEWRPVVDESCQTPIH-----HVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS----  213 (348)
Q Consensus       143 ~~~~~~~~~~~~~E~~~~~~~-----~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~----  213 (348)
                      ...      .+++|+.+....     .......|.+.|+.||.++|.+++.++++++++++++||++||||+....    
T Consensus       161 ~~~------~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~  234 (404)
T 1i24_A          161 TPN------IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHE  234 (404)
T ss_dssp             CCS------SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSG
T ss_pred             CCC------CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccc
Confidence            332      256665321100     00001236678999999999999999888899999999999999986421    


Q ss_pred             -----------CCchH-HHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC-C--ceEEEeccCcC
Q 035965          214 -----------VPSSI-QVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA-Q--GQYICCVKSCP  278 (348)
Q Consensus       214 -----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~-~--~~y~~~~~~~s  278 (348)
                                 ....+ .++.....+....+  .+   .+.+.|+|||++|+|++++.+++++.. +  ++||++++++|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~g---~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s  309 (404)
T 1i24_A          235 ELRNRLDYDAVFGTALNRFCVQAAVGHPLTV--YG---KGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFS  309 (404)
T ss_dssp             GGCCCCCCSTTTCCHHHHHHHHHHHTCCEEE--ET---TSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEE
T ss_pred             ccccccccccchhhHHHHHHHHHHcCCeeEE--eC---CCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCc
Confidence                       01222 33445555544222  23   334789999999999999999988764 4  47988778899


Q ss_pred             hHHHHHHHHHh---CCCCCCCccc-CCCC---CCCccccChHHHHHcCCccccChhHHHHHHHHHHHH
Q 035965          279 ISEFIDHLKLE---YPSSKMQTFE-GENQ---SSVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVD  339 (348)
Q Consensus       279 ~~el~~~i~~~---~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~LG~~p~~~~~e~l~~~~~~~~~  339 (348)
                      +.|+++.+.+.   +|. +.+... ....   ......+|++|+++|||+|+++++++++++++|++.
T Consensus       310 ~~e~~~~i~~~~~~~g~-~~~~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~  376 (404)
T 1i24_A          310 VNELASLVTKAGSKLGL-DVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQ  376 (404)
T ss_dssp             HHHHHHHHHHHHHTTTC-CCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCC-CccccccCcccCccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHh
Confidence            99999999998   664 333211 1111   123466799999999999999999999999999964

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=7e-43  Score=316.26  Aligned_cols=303  Identities=16%  Similarity=0.174  Sum_probs=226.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      +++|+|||||||||||++|+++|+++|++|++++|..... ..........+++++.+|+.|..     +.++|+|||+|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vih~A   99 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----YIEVDQIYHLA   99 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----CCCCSEEEECC
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----hcCCCEEEECc
Confidence            4578999999999999999999999999999999975432 11111111247899999998863     56899999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      +.........+     + ..++++|+.++.+++++|++.+ + +|||+||.++|+....     .+++|+.+.....   
T Consensus       100 ~~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~-----~~~~E~~~~~~~~---  163 (343)
T 2b69_A          100 SPASPPNYMYN-----P-IKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEV-----HPQSEDYWGHVNP---  163 (343)
T ss_dssp             SCCSHHHHTTC-----H-HHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSS-----SSBCTTCCCBCCS---
T ss_pred             cccCchhhhhC-----H-HHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCCCC-----CCCcccccccCCC---
Confidence            97654322223     3 3778999999999999999888 5 9999999986654332     4778875432111   


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchH-HHHHhhhcCCCCccccccccccCCCCcc
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSI-QVLLSPITGDSKFFSILSSVSNRMGSIA  246 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~  246 (348)
                       ..|.+.|+.+|.++|.+++.++++.+++++++||++||||+........+ .++...+.+....+  .+   .+++.++
T Consensus       164 -~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~  237 (343)
T 2b69_A          164 -IGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV--YG---SGSQTRA  237 (343)
T ss_dssp             -SSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEE--ES---SSCCEEE
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceE--cC---CCCeEEe
Confidence             12567899999999999999988889999999999999998654322233 23444555554322  22   3347899


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCCcccCCC--CCCCccccChHHHH-HcCCcc
Q 035965          247 LVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQTFEGEN--QSSVPSVISSEKLK-DLGFNY  322 (348)
Q Consensus       247 ~i~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~LG~~p  322 (348)
                      |+|++|+|++++.+++.+. ++.||+++ +++|+.|+++.+.+.+|. +.+....+.  ........|++|++ .|||+|
T Consensus       238 ~v~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~p~~~~~~~~~~~d~~k~~~~lG~~p  315 (343)
T 2b69_A          238 FQYVSDLVNGLVALMNSNV-SSPVNLGNPEEHTILEFAQLIKNLVGS-GSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP  315 (343)
T ss_dssp             CEEHHHHHHHHHHHHTSSC-CSCEEESCCCEEEHHHHHHHHHHHHTC-CCCEEEECCCTTCCCCCCBCCHHHHHHHCCCC
T ss_pred             eEeHHHHHHHHHHHHhcCC-CCeEEecCCCCCcHHHHHHHHHHHhCC-CCCceeCCCCCCCCceecCCHHHHHHHcCCCC
Confidence            9999999999999998763 67888764 689999999999999986 322211111  11346678999998 899999


Q ss_pred             ccChhHHHHHHHHHHHHc
Q 035965          323 KHGIEDIICQTIASCVDC  340 (348)
Q Consensus       323 ~~~~~e~l~~~~~~~~~~  340 (348)
                      +++++|+|+++++|++++
T Consensus       316 ~~~l~e~l~~~~~~~~~~  333 (343)
T 2b69_A          316 VVPLEEGLNKAIHYFRKE  333 (343)
T ss_dssp             CSCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHH
Confidence            889999999999999864

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=3.2e-44  Score=322.05  Aligned_cols=292  Identities=16%  Similarity=0.169  Sum_probs=222.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a   87 (348)
                      ++|+|||||||||||++|+++|+++|++|++++|+.                  .+|+.|.+++.++++  ++|+|||+|
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~------------------~~D~~d~~~~~~~~~~~~~d~vih~a   63 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------------ELNLLDSRAVHDFFASERIDQVYLAA   63 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc------------------cCCccCHHHHHHHHHhcCCCEEEEcC
Confidence            457999999999999999999999999999988753                  179999999999998  899999999


Q ss_pred             ccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           88 ASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        88 ~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      +..... ....+     + ..++++|+.++.+++++|++.+ +++|||+||.++|+....     .+++|+++....   
T Consensus        64 ~~~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~~~-----~~~~E~~~~~~~---  128 (321)
T 1e6u_A           64 AKVGGIVANNTY-----P-ADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAK-----QPMAESELLQGT---  128 (321)
T ss_dssp             CCCCCHHHHHHC-----H-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCC-----SSBCGGGTTSSC---
T ss_pred             eecCCcchhhhC-----H-HHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCCCC-----CCcCccccccCC---
Confidence            975421 11122     3 3788999999999999999988 889999999987654322     477777642100   


Q ss_pred             ccCCC-cchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC--CchHHHHH-hhhcC---CCCccccccccc
Q 035965          167 NKKAS-GWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV--PSSIQVLL-SPITG---DSKFFSILSSVS  239 (348)
Q Consensus       167 ~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~-~~~~~---~~~~~~~~~~~~  239 (348)
                        ..| .+.|+.+|.++|.+++.++++++++++++||++||||+.....  ...+..+. ....+   ....+...+   
T Consensus       129 --~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---  203 (321)
T 1e6u_A          129 --LEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWG---  203 (321)
T ss_dssp             --CCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEES---
T ss_pred             --CCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcC---
Confidence              113 3589999999999999998888999999999999999875321  12333233 23221   111222223   


Q ss_pred             cCCCCcceeeHHHHHHHHHHhhcCCCC---------CceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCC--CCCc
Q 035965          240 NRMGSIALVHIEDICNAHIFLMENDRA---------QGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQ--SSVP  307 (348)
Q Consensus       240 ~~~~~r~~i~v~D~a~~~~~~~~~~~~---------~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~--~~~~  307 (348)
                      .+.+.++|||++|+|++++.+++++..         +++||++ ++++|+.|+++.+.+.+|. +.+.......  ....
T Consensus       204 ~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~  282 (321)
T 1e6u_A          204 SGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGY-KGRVVFDASKPDGTPR  282 (321)
T ss_dssp             CSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTC-CSEEEEETTSCCCCSB
T ss_pred             CCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCC-CCceEeCCCCCCCccc
Confidence            344789999999999999999988654         4789885 5689999999999999886 3222111111  1446


Q ss_pred             cccChHHHHHcCCccccChhHHHHHHHHHHHHc
Q 035965          308 SVISSEKLKDLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       308 ~~~~~~~~~~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      ..+|++|+++|||+|+++++|+|+++++|++++
T Consensus       283 ~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~  315 (321)
T 1e6u_A          283 KLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN  315 (321)
T ss_dssp             CCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             ccCCHHHHHhcCCccCCcHHHHHHHHHHHHHHH
Confidence            788999998899999999999999999999875

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-43  Score=320.84  Aligned_cols=304  Identities=17%  Similarity=0.185  Sum_probs=230.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---ccccccC-----CCCCeEEEEccCCCcchHHHhhcC--C
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSKWT-----RSDRLRLFQADLQVEGSFDKAVMG--C   80 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~--~   80 (348)
                      ||+||||||+||||++|+++|+++|++|++++|+....   ....+..     ...+++++.+|++|.+++.+++++  +
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  103 (375)
T 1t2a_A           24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP  103 (375)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999976531   1111100     124688999999999999988875  7


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCc---ceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESV---KRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      |+|||+|+.........+     + ...+++|+.++.+++++|.+.+ +   ++|||+||.++|+....     .+++|+
T Consensus       104 d~vih~A~~~~~~~~~~~-----~-~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~~-----~~~~E~  171 (375)
T 1t2a_A          104 TEIYNLGAQSHVKISFDL-----A-EYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQE-----IPQKET  171 (375)
T ss_dssp             SEEEECCSCCCHHHHHHS-----H-HHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSS-----SSBCTT
T ss_pred             CEEEECCCcccccccccC-----H-HHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCCC-----CCCCcc
Confidence            999999997554321122     3 3789999999999999999887 5   79999999987654332     478888


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCC-c-hHHHHHhhhcCCCCccccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVP-S-SIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~  235 (348)
                      ++..         |.+.|+.+|.++|.+++.++++++++++++||+++|||+...... . +...+.....+....+. .
T Consensus       172 ~~~~---------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~-~  241 (375)
T 1t2a_A          172 TPFY---------PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFS-L  241 (375)
T ss_dssp             SCCC---------CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEE-E
T ss_pred             CCCC---------CCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeE-e
Confidence            7643         667899999999999999998889999999999999998654211 1 11223344445433222 2


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCC------CCcc----------
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSK------MQTF----------  298 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~------~~~~----------  298 (348)
                      +   .+++.++|||++|+|++++.+++++. .+.||++ ++++|+.|+++.+.+.+|...      +|..          
T Consensus       242 g---~~~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~  317 (375)
T 1t2a_A          242 G---NLDAKRDWGHAKDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVH  317 (375)
T ss_dssp             S---CTTCEECCEEHHHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEE
T ss_pred             C---CCCceeeeEEHHHHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccce
Confidence            2   33478999999999999999998865 4788775 568999999999999998621      1110          


Q ss_pred             --cCC--CCC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          299 --EGE--NQS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       299 --~~~--~~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                        ...  ..+  .....+|++|++ +|||+|+++++|+|+++++|+++.
T Consensus       318 ~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  366 (375)
T 1t2a_A          318 VTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVEL  366 (375)
T ss_dssp             EEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             eecCcccCCcccchhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHh
Confidence              111  111  334667999999 799999999999999999999864

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-43  Score=319.51  Aligned_cols=304  Identities=15%  Similarity=0.205  Sum_probs=226.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---ccccccC----CCCCeEEEEccCCCcchHHHhhcC--CC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSKWT----RSDRLRLFQADLQVEGSFDKAVMG--CD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~--~d   81 (348)
                      ||+|||||||||||++|+++|+++|++|++++|+..+.   .+..+..    ...+++++.+|++|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            57899999999999999999999999999999976431   1111110    124688999999999999988875  79


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCc---ceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESV---KRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      +|||+|+.........+     + ...+++|+.++.++++++.+.+ +   ++|||+||.++|+....     .+++|++
T Consensus        81 ~vih~A~~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~~~-----~~~~E~~  148 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFES-----P-EYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQE-----IPQKETT  148 (372)
T ss_dssp             EEEECCCCCTTTTTTSC-----H-HHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCS-----SSBCTTS
T ss_pred             EEEECCcccCccccccC-----H-HHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCCCC-----CCCCccC
Confidence            99999997654332233     3 3778999999999999999887 6   79999999987654322     4788887


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC-CchH-HHHHhhhcCCCCcccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV-PSSI-QVLLSPITGDSKFFSILS  236 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~  236 (348)
                      +..         |.+.|+.+|.++|.+++.++++++++++++|++++|||+..... ...+ ..+.....|....+. .+
T Consensus       149 ~~~---------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~-~g  218 (372)
T 1db3_A          149 PFY---------PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLY-LG  218 (372)
T ss_dssp             CCC---------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEE-ES
T ss_pred             CCC---------CCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCcee-ec
Confidence            654         66789999999999999999888999999999999999865421 1112 223334445432222 23


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCC-------cc----------
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQ-------TF----------  298 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~-------~~----------  298 (348)
                         .+++.|+|+|++|+|++++.+++++. ++.||++ ++++|+.|+++.+.+.+|. +.+       ..          
T Consensus       219 ---~~~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~p~~~~~~~~~~~~  293 (372)
T 1db3_A          219 ---NMDSLRDWGHAKDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGI-KLRFEGTGVEEKGIVVSVTGHD  293 (372)
T ss_dssp             ---CTTCEECCEEHHHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTE-EEEEESCGGGCEEEEEEECSSS
T ss_pred             ---CCCceeeeeEHHHHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCC-Cccccccccccccccccccccc
Confidence               33478999999999999999998765 4789875 5689999999999999875 211       00          


Q ss_pred             ------------cCC--CCC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcC
Q 035965          299 ------------EGE--NQS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       299 ------------~~~--~~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                                  ..+  ..+  .....+|++|++ +|||+|+++++|+|+++++|+++..
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~  353 (372)
T 1db3_A          294 APGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAA  353 (372)
T ss_dssp             CTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred             ccccccccceeeccccccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhh
Confidence                        001  111  235667999998 7999999999999999999997643

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=5.3e-43  Score=319.20  Aligned_cols=304  Identities=17%  Similarity=0.165  Sum_probs=228.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCC--cc-ccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPG--KL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFH   85 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~--~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih   85 (348)
                      |+||||||+||||++|+++|+++ |++|++++|+..  .. .+..+ ....+++++.+|++|.+++.++++  ++|+|||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhh-hcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            47999999999999999999998 799999999752  11 22111 113478999999999999999987  8999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcc-------eEEEeccceeeeecCCCC-----CCC
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVK-------RVVLTSSVSTITAKDSSG-----EWR  151 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~-------~~v~~SS~~~~~~~~~~~-----~~~  151 (348)
                      +|+.........+     + ..++++|+.++.+++++|.+.  + ++       +|||+||.++|+......     ...
T Consensus        80 ~A~~~~~~~~~~~-----~-~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~  152 (361)
T 1kew_A           80 LAAESHVDRSITG-----P-AAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTL  152 (361)
T ss_dssp             CCSCCCHHHHHHC-----T-HHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCC
T ss_pred             CCCCcChhhhhhC-----H-HHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccC
Confidence            9997653221122     3 378999999999999999987  6 55       999999998665432100     000


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSK  230 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~  230 (348)
                      .+++|+++..         |.+.|+.+|.++|.+++.++++++++++++||++||||+....  ..+. .+.....+...
T Consensus       153 ~~~~E~~~~~---------~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~  221 (361)
T 1kew_A          153 PLFTETTAYA---------PSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPL  221 (361)
T ss_dssp             CCBCTTSCCC---------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT--SHHHHHHHHHHHTCCE
T ss_pred             CCCCCCCCCC---------CCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc--cHHHHHHHHHHcCCCc
Confidence            1567776543         6678999999999999999988899999999999999986532  2222 33344455432


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCCc--------ccCC
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQT--------FEGE  301 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~--------~~~~  301 (348)
                      .+  .+   .+.+.++|+|++|+|++++.+++++..++.||+++ +++|+.|+++.+.+.+|. +.|.        ....
T Consensus       222 ~~--~~---~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~-~~~~~~p~~~~~~~~~  295 (361)
T 1kew_A          222 PI--YG---KGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDE-IVPKATSYREQITYVA  295 (361)
T ss_dssp             EE--ET---TSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHH-HSCCSSCGGGGEEEEC
T ss_pred             eE--cC---CCceeEeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCC-cCccccccccceeecC
Confidence            22  22   33478899999999999999998776667898865 589999999999998764 1110        0101


Q ss_pred             CCC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          302 NQS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       302 ~~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      ..+  .....+|++|++ +|||+|+++++|+|+++++|++++
T Consensus       296 ~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  337 (361)
T 1kew_A          296 DRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             CCTTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             CCCcccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence            111  235678999999 799999999999999999999865

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=1.5e-42  Score=312.46  Aligned_cols=296  Identities=19%  Similarity=0.180  Sum_probs=225.7

Q ss_pred             CcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc--CCC
Q 035965            5 EESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCD   81 (348)
Q Consensus         5 ~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d   81 (348)
                      .+..+++|+||||||+||||++|+++|+++|++|++++|+.... ....   ...+++++.+|++|.+++.++++  ++|
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~l~~v~~~~~Dl~d~~~~~~~~~~~~~D   90 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP---PVAGLSVIEGSVTDAGLLERAFDSFKPT   90 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC---SCTTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh---ccCCceEEEeeCCCHHHHHHHHhhcCCC
Confidence            44556678999999999999999999999999999999965432 1111   11478999999999999999998  999


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTP  161 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~  161 (348)
                      +|||+|+..... ...+     +  . +++|+.++.+++++|.+.+ +++|||+||.++|+.....   ..+++|++  .
T Consensus        91 ~vih~A~~~~~~-~~~~-----~--~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~---~~~~~E~~--~  155 (330)
T 2pzm_A           91 HVVHSAAAYKDP-DDWA-----E--D-AATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATV---PIPIDSPT--A  155 (330)
T ss_dssp             EEEECCCCCSCT-TCHH-----H--H-HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSS---SBCTTCCC--C
T ss_pred             EEEECCccCCCc-cccC-----h--h-HHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccC---CCCcCCCC--C
Confidence            999999976542 1111     1  3 8999999999999999887 8899999999876433220   11677765  1


Q ss_pred             cchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHH-HHhhhcCCCCcccccccccc
Q 035965          162 IHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQV-LLSPITGDSKFFSILSSVSN  240 (348)
Q Consensus       162 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  240 (348)
                               |.+.|+.+|.++|.+++.+    +++++++||+++|||+...   ..+.. +.....+. ..+   +   .
T Consensus       156 ---------~~~~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~~---~~~~~~~~~~~~~~-~~~---~---~  212 (330)
T 2pzm_A          156 ---------PFTSYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLAI---GPIPTFYKRLKAGQ-KCF---C---S  212 (330)
T ss_dssp             ---------CCSHHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCCS---SHHHHHHHHHHTTC-CCC---E---E
T ss_pred             ---------CCChHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCCC---CHHHHHHHHHHcCC-EEe---C---C
Confidence                     5678999999999998876    7999999999999998621   23322 23333443 211   1   2


Q ss_pred             CCCCcceeeHHHHHH-HHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCCcccCCCC-CCCccccChHHH--
Q 035965          241 RMGSIALVHIEDICN-AHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQTFEGENQ-SSVPSVISSEKL--  315 (348)
Q Consensus       241 ~~~~r~~i~v~D~a~-~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--  315 (348)
                      +. .++|+|++|+|+ +++.+++++. ++.|++++ +++|+.|+++.+.+.+|..  ++...+.. ......+|++|+  
T Consensus       213 ~~-~~~~i~~~Dva~~a~~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~--~~~~~~~~~~~~~~~~d~~k~~~  288 (330)
T 2pzm_A          213 DT-VRDFLDMSDFLAIADLSLQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGAT--LAEPVPVVAPGADDVPSVVLDPS  288 (330)
T ss_dssp             SC-EECEEEHHHHHHHHHHHTSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC--CSSCCCEECCCTTSCSEECBCCH
T ss_pred             CC-EecceeHHHHHHHHHHHHhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCC--CceeCCCCcchhhccCCHHHHhh
Confidence            23 678999999999 9999998866 77898865 5999999999999998864  32221111 133456677776  


Q ss_pred             ---HHcCCccccChhHHHHHHHHHHHHcCCCCC
Q 035965          316 ---KDLGFNYKHGIEDIICQTIASCVDCGFLPP  345 (348)
Q Consensus       316 ---~~LG~~p~~~~~e~l~~~~~~~~~~~~~~~  345 (348)
                         ++|||+|+++++|+|+++++|+++.+.+.+
T Consensus       289 ~~l~~lG~~p~~~~~~~l~~~~~~~~~~~~~~~  321 (330)
T 2pzm_A          289 KTETEFGWKAKVDFKDTITGQLAWYDKYGVTDI  321 (330)
T ss_dssp             HHHHHHCCCCCCCHHHHHHHHHHHHHHHCSCSC
T ss_pred             chHHHcCCcccCCHHHHHHHHHHHHHhhCcccc
Confidence               889999988999999999999999988743

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=7.4e-43  Score=312.63  Aligned_cols=295  Identities=18%  Similarity=0.222  Sum_probs=227.7

Q ss_pred             eEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEccc
Q 035965           13 TFCVTGANGYIGSWLVKTLLER--GYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAA   88 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~   88 (348)
                      +|||||||||||++|+++|+++  |++|++++|+..+.         .+++++.+|++|.+++.++++  ++|+|||+|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~---------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~   71 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT---------GGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAG   71 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC---------TTCCEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc---------cCceEEEecCCCHHHHHHHHhhcCCcEEEECCc
Confidence            5999999999999999999998  89999999875432         146789999999999999887  8999999999


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      ...... ..+     + ..++++|+.++.+++++|++.+ +++|||+||.++|+....    ..+.+|+.+..       
T Consensus        72 ~~~~~~-~~~-----~-~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~----~~~~~e~~~~~-------  132 (317)
T 3ajr_A           72 ILSAKG-EKD-----P-ALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETP----KNKVPSITITR-------  132 (317)
T ss_dssp             CCHHHH-HHC-----H-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTSC----SSSBCSSSCCC-------
T ss_pred             ccCCcc-ccC-----h-HHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCCC----CCCccccccCC-------
Confidence            754321 112     3 3789999999999999999988 889999999987654322    23566666543       


Q ss_pred             CCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC---CchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          169 KASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV---PSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       169 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                        |.+.|+.+|.++|.+++.++++++++++++||+.+||+...+..   ......+.+.+.+.....  .+   .+.+.+
T Consensus       133 --p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~  205 (317)
T 3ajr_A          133 --PRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKC--YL---APNRAL  205 (317)
T ss_dssp             --CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEE--CS---CTTCCE
T ss_pred             --CCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCcee--ec---Ccccee
Confidence              67889999999999999998888999999999999998653321   223333444444443222  22   234789


Q ss_pred             ceeeHHHHHHHHHHhhcCCCC----CceEEEeccCcChHHHHHHHHHhCCCCCCCcccCC---CCCCCccccChHHHH-H
Q 035965          246 ALVHIEDICNAHIFLMENDRA----QGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGE---NQSSVPSVISSEKLK-D  317 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~----~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~  317 (348)
                      +|+|++|+|++++.+++++..    ++.||++++.+|+.|+++.+.+.+|...++.....   ........+|++|++ +
T Consensus       206 ~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~~~  285 (317)
T 3ajr_A          206 PMMYMPDALKALVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEASNE  285 (317)
T ss_dssp             EEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCCSCCEEECCCHHHHHHTTSCSCBCCHHHHHH
T ss_pred             eeeEHHHHHHHHHHHHhCCccccccCceEecCCccccHHHHHHHHHHHCCccccccccccchhhccccccccCHHHHHHH
Confidence            999999999999999987642    46899887889999999999999885333221110   000234568999999 7


Q ss_pred             cCCccccChhHHHHHHHHHHHHcCC
Q 035965          318 LGFNYKHGIEDIICQTIASCVDCGF  342 (348)
Q Consensus       318 LG~~p~~~~~e~l~~~~~~~~~~~~  342 (348)
                      |||+|+++++|+|+++++|++++-.
T Consensus       286 lG~~p~~~~~~~l~~~~~~~~~~~~  310 (317)
T 3ajr_A          286 WGFSIEYDLDRTIDDMIDHISEKLG  310 (317)
T ss_dssp             HCCCCCCCHHHHHHHHHHHHHHHTT
T ss_pred             cCCCCCCCHHHHHHHHHHHHHhhhc
Confidence            9999999999999999999987544

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=1.5e-42  Score=314.17  Aligned_cols=304  Identities=15%  Similarity=0.157  Sum_probs=229.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccc---cccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ---IFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vi   84 (348)
                      ++|+|||||||||||++|+++|+++|++|++++|+..+..   +... ...++++++.+|++|.+++.+++++  +|+||
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKEL-GIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHT-TCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhc-cccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            4579999999999999999999999999999999865431   1111 1124689999999999999988875  69999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCc-ceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESV-KRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      |+|+.........+     + ..++++|+.++.+++++|.+.+ + ++|||+||.++|+....     .+++|+.+..  
T Consensus        81 h~A~~~~~~~~~~~-----~-~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~-----~~~~e~~~~~--  146 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQ-----P-ILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKVQE-----IPQTEKTPFY--  146 (345)
T ss_dssp             ECCCCCCHHHHTTS-----H-HHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSCSS-----SSBCTTSCCC--
T ss_pred             ECCCCcchhhhhhC-----H-HHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCCC-----CCCCccCCCC--
Confidence            99997643321222     3 4789999999999999999877 5 79999999987654332     4778877543  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC-CchH-HHHHhhhcCCCCccccccccccC
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV-PSSI-QVLLSPITGDSKFFSILSSVSNR  241 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~  241 (348)
                             |.+.|+.+|.++|.+++.++++++++++++|++++|||+..... ...+ ..+.+...+....+. .+.   +
T Consensus       147 -------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~  215 (345)
T 2z1m_A          147 -------PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLV-LGN---L  215 (345)
T ss_dssp             -------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEE-ESC---T
T ss_pred             -------CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeee-eCC---C
Confidence                   66789999999999999999888999999999999999865321 1111 122233344332211 222   3


Q ss_pred             CCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCC------CCc------------ccCC-
Q 035965          242 MGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSK------MQT------------FEGE-  301 (348)
Q Consensus       242 ~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~------~~~------------~~~~-  301 (348)
                      .+.|+|+|++|+|++++.+++++. ++.||++ ++.+|+.|+++.+.+.+|...      +|.            .... 
T Consensus       216 ~~~~~~~~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  294 (345)
T 2z1m_A          216 NAKRDWGYAPEYVEAMWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEE  294 (345)
T ss_dssp             TCEECCEEHHHHHHHHHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGG
T ss_pred             CceeeeEEHHHHHHHHHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcc
Confidence            478899999999999999998765 4788875 569999999999999998621      110            0110 


Q ss_pred             -CCC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          302 -NQS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       302 -~~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                       ..+  .....+|++|++ +|||+|+++++|+|+++++|++++
T Consensus       295 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  337 (345)
T 2z1m_A          295 FFRPAEVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKR  337 (345)
T ss_dssp             GSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCcceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence             011  334567999998 799999999999999999999864

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=7.2e-43  Score=308.38  Aligned_cols=270  Identities=17%  Similarity=0.131  Sum_probs=216.2

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAAS   89 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~~   89 (348)
                      |+|||||||||||++|+++|+++|++|++++|..                   +|+.|.+++.++++  ++|+|||+|+.
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-------------------~D~~d~~~~~~~~~~~~~d~vi~~a~~   66 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKL-------------------LDITNISQVQQVVQEIRPHIIIHCAAY   66 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT-------------------SCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEecccc-------------------cCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence            4899999999999999999999999999999932                   89999999999888  69999999998


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      ........+     + ...+++|+.++.+++++|++.+ + +|||+||.++|++...     .+++|+++..        
T Consensus        67 ~~~~~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~~~-----~~~~E~~~~~--------  125 (287)
T 3sc6_A           67 TKVDQAEKE-----R-DLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGDRP-----EGYDEFHNPA--------  125 (287)
T ss_dssp             CCHHHHTTC-----H-HHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCCCS-----SCBCTTSCCC--------
T ss_pred             cChHHHhcC-----H-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCCCC-----CCCCCCCCCC--------
Confidence            765443333     4 3889999999999999999988 5 7999999987655433     5889988654        


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhh-cCCCCccccccccccCCCCccee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPI-TGDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                       |.+.|+.+|.++|.+++.++.    +++++||++||||+...    .+..+.... .+..  +...+     ++.++|+
T Consensus       126 -p~~~Y~~sK~~~E~~~~~~~~----~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~--~~~~~-----~~~~~~i  189 (287)
T 3sc6_A          126 -PINIYGASKYAGEQFVKELHN----KYFIVRTSWLYGKYGNN----FVKTMIRLGKEREE--ISVVA-----DQIGSPT  189 (287)
T ss_dssp             -CCSHHHHHHHHHHHHHHHHCS----SEEEEEECSEECSSSCC----HHHHHHHHHTTCSE--EEEEC-----SCEECCE
T ss_pred             -CCCHHHHHHHHHHHHHHHhCC----CcEEEeeeeecCCCCCc----HHHHHHHHHHcCCC--eEeec-----CcccCce
Confidence             778999999999999998754    78999999999997543    333333333 3332  22222     2678899


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCCCCccc------CCC-CCCCccccChHHHHHcCC
Q 035965          249 HIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQTFE------GEN-QSSVPSVISSEKLKDLGF  320 (348)
Q Consensus       249 ~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~LG~  320 (348)
                      |++|+|++++.+++++. ++.||+++ +.+|+.|+++.+.+.+|. +.+...      ... .......+|++|+++|||
T Consensus       190 ~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~  267 (287)
T 3sc6_A          190 YVADLNVMINKLIHTSL-YGTYHVSNTGSCSWFEFAKKIFSYANM-KVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGF  267 (287)
T ss_dssp             EHHHHHHHHHHHHTSCC-CEEEECCCBSCEEHHHHHHHHHHHHTC-CCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTC
T ss_pred             EHHHHHHHHHHHHhCCC-CCeEEEcCCCcccHHHHHHHHHHHcCC-CcceeeeehhhcCcccCCCCcccccHHHHHhhCC
Confidence            99999999999999987 78998864 589999999999999986 222211      111 114567899999999999


Q ss_pred             ccccChhHHHHHHHHHHHH
Q 035965          321 NYKHGIEDIICQTIASCVD  339 (348)
Q Consensus       321 ~p~~~~~e~l~~~~~~~~~  339 (348)
                      .|.++++|+|+++++|+++
T Consensus       268 ~p~~~~~~~l~~~~~~~~~  286 (287)
T 3sc6_A          268 LQMPSWEEGLERFFIETKS  286 (287)
T ss_dssp             CCCCBHHHHHHHHHHHTC-
T ss_pred             CCCccHHHHHHHHHHHHhc
Confidence            9999999999999999864

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=2.1e-42  Score=317.60  Aligned_cols=302  Identities=17%  Similarity=0.174  Sum_probs=227.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---ccccccC----CCC-CeEEEEccCCCcchHHHhhcC--C
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSKWT----RSD-RLRLFQADLQVEGSFDKAVMG--C   80 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~----~~~-~~~~~~~Dl~d~~~~~~~~~~--~   80 (348)
                      +|+||||||+||||++|+++|+++|++|++++|+..+.   .+.....    ..+ +++++.+|++|.+++.+++++  +
T Consensus        28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  107 (381)
T 1n7h_A           28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP  107 (381)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence            37999999999999999999999999999999976541   1111110    012 688999999999999988875  6


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcc-----eEEEeccceeeeecCCCCCCCCccc
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK-----RVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-----~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      |+|||+|+.........+     + ..++++|+.++.+++++|.+.+ ++     +|||+||.++|+.. .    . +++
T Consensus       108 d~Vih~A~~~~~~~~~~~-----~-~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~-~----~-~~~  174 (381)
T 1n7h_A          108 DEVYNLAAQSHVAVSFEI-----P-DYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGST-P----P-PQS  174 (381)
T ss_dssp             SEEEECCSCCCHHHHHHS-----H-HHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTS-C----S-SBC
T ss_pred             CEEEECCcccCccccccC-----H-HHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCC-C----C-CCC
Confidence            999999997654321122     3 3788999999999999999876 55     99999999866432 2    2 778


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCC-ch-HHHHHhhhcCCCCccc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVP-SS-IQVLLSPITGDSKFFS  233 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~-~~-~~~~~~~~~~~~~~~~  233 (348)
                      |+++..         |.+.|+.+|.++|.+++.++++++++++++|++++|||+...... .. ...+.....+....+.
T Consensus       175 E~~~~~---------~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~  245 (381)
T 1n7h_A          175 ETTPFH---------PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLF  245 (381)
T ss_dssp             TTSCCC---------CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEE
T ss_pred             CCCCCC---------CCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEE
Confidence            877543         667899999999999999998889999999999999998654211 11 1223334445432222


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCC--cccCC--CCC--CC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQ--TFEGE--NQS--SV  306 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~--~~~~~--~~~--~~  306 (348)
                       .+   .+++.++|+|++|+|++++.+++++. ++.||++ ++.+|+.|+++.+.+.+|.. .+  .....  ..+  ..
T Consensus       246 -~g---~~~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~  319 (381)
T 1n7h_A          246 -LG---NLQASRDWGFAGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLN-WKDYVEIDQRYFRPAEVD  319 (381)
T ss_dssp             -ES---CTTCEEECEEHHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCC-GGGTEEECGGGSCSSCCC
T ss_pred             -eC---CCCceeeeEEHHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCC-cccccccCcccCCccccc
Confidence             22   33478999999999999999998865 4788875 55899999999999999862 11  11111  111  34


Q ss_pred             ccccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          307 PSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       307 ~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      ...+|++|++ .|||+|+++++|+|+++++|+++.
T Consensus       320 ~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  354 (381)
T 1n7h_A          320 NLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL  354 (381)
T ss_dssp             BCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHhh
Confidence            5667999999 799999889999999999999753

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=1.1e-41  Score=307.23  Aligned_cols=292  Identities=18%  Similarity=0.161  Sum_probs=221.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih   85 (348)
                      ++||+|||||||||||++|+++|+++|++|++++|+.... ....   ..++++++.+|++|.+++.+++++  +|+|||
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih   95 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK---DHPNLTFVEGSIADHALVNQLIGDLQPDAVVH   95 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC---CCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh---hcCCceEEEEeCCCHHHHHHHHhccCCcEEEE
Confidence            4678999999999999999999999999999999976432 1111   114789999999999999999887  999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +|+..... ...+     +  . +++|+.++.+++++|.+.+ +++|||+||.++|+..+...  ..+++|++  .    
T Consensus        96 ~A~~~~~~-~~~~-----~--~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~--~~~~~E~~--~----  157 (333)
T 2q1w_A           96 TAASYKDP-DDWY-----N--D-TLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQ--PVRLDHPR--N----  157 (333)
T ss_dssp             CCCCCSCT-TCHH-----H--H-HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSS--SBCTTSCC--C----
T ss_pred             CceecCCC-ccCC-----h--H-HHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccC--CCCcCCCC--C----
Confidence            99976543 1112     2  3 8999999999999999987 88999999988664211111  12666765  1    


Q ss_pred             hccCCCc-chhHhhHHHHHHHHHH-HHHhCCCcEEEEecCccccCCCCCCCCchHHH-HHhhhcCCCCccccccccccCC
Q 035965          166 WNKKASG-WVYVLSKLLSEETAFK-FANENKIDLVSVITTTVAGPFLTSSVPSSIQV-LLSPITGDSKFFSILSSVSNRM  242 (348)
Q Consensus       166 ~~~~~~~-~~Y~~sK~~~E~~~~~-~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  242 (348)
                           |. +.|+.+|.++|.+++. ++     +++++||+++|||+..   ...+.. +.....+.  .+  .+    +.
T Consensus       158 -----p~~~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~---~~~~~~~~~~~~~~~--~~--~~----~~  216 (333)
T 2q1w_A          158 -----PANSSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV---SGPLPIFFQRLSEGK--KC--FV----TK  216 (333)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC---SSHHHHHHHHHHTTC--CC--EE----EE
T ss_pred             -----CCCCchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc---CcHHHHHHHHHHcCC--ee--eC----CC
Confidence                 55 7899999999999988 64     7999999999999832   223332 33334443  22  22    23


Q ss_pred             CCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCC-C-----CCccccChHHH
Q 035965          243 GSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQ-S-----SVPSVISSEKL  315 (348)
Q Consensus       243 ~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~  315 (348)
                      +.++|+|++|+|++++.+++++. ++.|+++ ++.+|+.|+++.+.+.+|..  ++...+.. .     .....+|++|+
T Consensus       217 ~~~~~i~v~Dva~ai~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~--~~~~~~~~~~~~~~~~~~~~~d~~k~  293 (333)
T 2q1w_A          217 ARRDFVFVKDLARATVRAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALP--SYPEPEIRELGPDDAPSILLDPSRTI  293 (333)
T ss_dssp             CEECEEEHHHHHHHHHHHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCS--SCCCCEEEECCTTSCCCCCBCCHHHH
T ss_pred             ceEeeEEHHHHHHHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCC--CceeCCCCCcccccccccccCCHHHH
Confidence            67889999999999999999876 7789886 46999999999999999863  22111110 0     25678999999


Q ss_pred             HHcCCccccChhHHHHHHHHHHHHcCCCCC
Q 035965          316 KDLGFNYKHGIEDIICQTIASCVDCGFLPP  345 (348)
Q Consensus       316 ~~LG~~p~~~~~e~l~~~~~~~~~~~~~~~  345 (348)
                      +.+||+|+++++|+|+++++|+++.+.+++
T Consensus       294 ~~~G~~p~~~~~~~l~~~~~~~~~~~~~~~  323 (333)
T 2q1w_A          294 QDFGKIEFTPLKETVAAAVAYFREYGVSGG  323 (333)
T ss_dssp             HHHCCCCCCCHHHHHHHHHHHHHHHCC---
T ss_pred             HhcCCCcCCCHHHHHHHHHHHHHHHCCCCC
Confidence            945999999999999999999999998754

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=3.4e-42  Score=313.43  Aligned_cols=295  Identities=17%  Similarity=0.185  Sum_probs=223.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-----CCCEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-----GCDGV   83 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~V   83 (348)
                      ++|+|||||||||||++|+++|+++| ++|++++|+.........    .++. +.+|++|.+.+..+++     ++|+|
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~----~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~V  119 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL----VDLN-IADYMDKEDFLIQIMAGEEFGDVEAI  119 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT----TTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc----cCce-EeeecCcHHHHHHHHhhcccCCCCEE
Confidence            34789999999999999999999999 999999997654211111    1333 6789999988988887     59999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      ||+|+......  .+     + ..++++|+.++.+++++|.+.+ + +|||+||.++|+....     .+++|+++..  
T Consensus       120 ih~A~~~~~~~--~~-----~-~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~~-----~~~~E~~~~~--  182 (357)
T 2x6t_A          120 FHEGACSSTTE--WD-----G-KYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTS-----DFIESREYEK--  182 (357)
T ss_dssp             EECCSCCCTTC--CC-----H-HHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCSS-----CCCSSGGGCC--
T ss_pred             EECCcccCCcc--CC-----H-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCCC-----CCcCCcCCCC--
Confidence            99999765411  22     3 4789999999999999999988 6 9999999987654322     4677776543  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC--CCchHHH-HHhhhcCCCCcccccccccc
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS--VPSSIQV-LLSPITGDSKFFSILSSVSN  240 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~  240 (348)
                             |.+.|+.+|.++|.+++.++++.+++++++||++||||+....  ....+.. +.....+....+  .+.   
T Consensus       183 -------p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---  250 (357)
T 2x6t_A          183 -------PLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKL--FEG---  250 (357)
T ss_dssp             -------CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEE--ETT---
T ss_pred             -------CCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEE--eCC---
Confidence                   6678999999999999999988899999999999999986532  1123333 334444443222  222   


Q ss_pred             CCC-CcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCC----CCCCccccChHH
Q 035965          241 RMG-SIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGEN----QSSVPSVISSEK  314 (348)
Q Consensus       241 ~~~-~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  314 (348)
                      +.+ .++|+|++|+|++++.+++++. ++.||++ ++.+|+.|+++.+.+.+|...++......    .......+|+++
T Consensus       251 ~~~~~~~~i~v~Dva~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k  329 (357)
T 2x6t_A          251 SENFKRDFVYVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTN  329 (357)
T ss_dssp             GGGCEECEEEHHHHHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGTTSCCSBCCCCCHH
T ss_pred             CCcceEccEEHHHHHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccccccccccccCHHH
Confidence            336 7889999999999999999876 7789885 56999999999999999863121111110    003456788999


Q ss_pred             HHHcCC-ccccChhHHHHHHHHHHHH
Q 035965          315 LKDLGF-NYKHGIEDIICQTIASCVD  339 (348)
Q Consensus       315 ~~~LG~-~p~~~~~e~l~~~~~~~~~  339 (348)
                      +++||| .|..+++|+|+++++|+++
T Consensus       330 ~~~lG~~~~~~~l~e~l~~~~~~~~~  355 (357)
T 2x6t_A          330 LRAAGYDKPFKTVAEGVTEYMAWLNR  355 (357)
T ss_dssp             HHHTTCCCCCCCHHHHHHHHHHHHC-
T ss_pred             HHHcCCCCCCCCHHHHHHHHHHHHhh
Confidence            999999 7888999999999999965

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=6.9e-42  Score=301.94  Aligned_cols=265  Identities=15%  Similarity=0.116  Sum_probs=207.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      .|||+|||||| ||||++|+++|+++|++|++++|++.+. .+..     .+++++.+|+.|.+     ++++|+|||+|
T Consensus         3 ~m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~-----~~~~d~vi~~a   71 (286)
T 3ius_A            3 AMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-----SGAEPLLWPGEEPS-----LDGVTHLLIST   71 (286)
T ss_dssp             --CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-----TTEEEEESSSSCCC-----CTTCCEEEECC
T ss_pred             CCcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-----CCCeEEEecccccc-----cCCCCEEEECC
Confidence            35689999998 9999999999999999999999987654 2221     37999999999955     67899999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh--cCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK--SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~--~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +......         +          .+.++++++++  .+ +++|||+||.++|+...     ..+++|+++..    
T Consensus        72 ~~~~~~~---------~----------~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~-----~~~~~E~~~~~----  122 (286)
T 3ius_A           72 APDSGGD---------P----------VLAALGDQIAARAAQ-FRWVGYLSTTAVYGDHD-----GAWVDETTPLT----  122 (286)
T ss_dssp             CCBTTBC---------H----------HHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCT-----TCEECTTSCCC----
T ss_pred             Ccccccc---------H----------HHHHHHHHHHhhcCC-ceEEEEeecceecCCCC-----CCCcCCCCCCC----
Confidence            9654321         2          25688999988  45 88999999998665433     25889988654    


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                           |.+.|+.+|+++|.+++.+   .+++++++||+++|||+...        +.....+....+.      .+.+.+
T Consensus       123 -----p~~~Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~--------~~~~~~~~~~~~~------~~~~~~  180 (286)
T 3ius_A          123 -----PTAARGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGP--------FSKLGKGGIRRII------KPGQVF  180 (286)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSS--------STTSSSSCCCEEE------CTTCCB
T ss_pred             -----CCCHHHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchH--------HHHHhcCCccccC------CCCccc
Confidence                 6788999999999999987   58999999999999998553        2233344433332      223688


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCccc--CC--CCC------CCccccChHH
Q 035965          246 ALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFE--GE--NQS------SVPSVISSEK  314 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~--~~--~~~------~~~~~~~~~~  314 (348)
                      +|||++|+|++++.+++++..++.||++ ++++|+.|+++.+.+.+|. +.+...  ..  ..+      .....+|++|
T Consensus       181 ~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  259 (286)
T 3ius_A          181 SRIHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGL-PLPPAVDFDKADLTPMARSFYSENKRVRNDR  259 (286)
T ss_dssp             CEEEHHHHHHHHHHHHHSCCTTCEEEECCSCCBCHHHHHHHHHHHHTC-CCCCEEEGGGSCCCHHHHHTTSCCCEECCHH
T ss_pred             ceEEHHHHHHHHHHHHhCCCCCCEEEEeCCCCccHHHHHHHHHHHcCC-CCCcccchhhhccChhHHHhhcCCceeehHH
Confidence            9999999999999999998877799886 5689999999999999986 332211  11  111      2577889999


Q ss_pred             HH-HcCCcccc-ChhHHHHHHHHH
Q 035965          315 LK-DLGFNYKH-GIEDIICQTIAS  336 (348)
Q Consensus       315 ~~-~LG~~p~~-~~~e~l~~~~~~  336 (348)
                      ++ .|||+|++ +++|+|+++++.
T Consensus       260 ~~~~lG~~p~~p~~~e~l~~~~~~  283 (286)
T 3ius_A          260 IKEELGVRLKYPNYRVGLEALQAD  283 (286)
T ss_dssp             HHHTTCCCCSCSSHHHHHHHHHHT
T ss_pred             HHHHhCCCCCcCCHHHHHHHHHHh
Confidence            99 69999999 799999999864

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-42  Score=308.58  Aligned_cols=293  Identities=17%  Similarity=0.191  Sum_probs=211.5

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcC-----CCEEEEc
Q 035965           13 TFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMG-----CDGVFHV   86 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~d~Vih~   86 (348)
                      +|||||||||||++|+++|+++| ++|++++|...........    ++. +.+|++|.+.+..++++     +|+|||+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~----~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~   75 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV----DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHE   75 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH----TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC----cce-eccccccHHHHHHHHhccccCCCcEEEEC
Confidence            59999999999999999999999 9999999976542111111    233 67899999889888875     9999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      |+......  .+     + ..++++|+.++.+++++|++.+ + +|||+||.++|+....     .+++|+++..     
T Consensus        76 a~~~~~~~--~~-----~-~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~-----~~~~E~~~~~-----  135 (310)
T 1eq2_A           76 GACSSTTE--WD-----G-KYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTS-----DFIESREYEK-----  135 (310)
T ss_dssp             CSCCCTTC--CC-----H-HHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCS-----CBCSSGGGCC-----
T ss_pred             cccccCcc--cC-----H-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCCC-----CCCCCCCCCC-----
Confidence            99765411  22     3 4789999999999999999988 7 9999999986654322     4677776443     


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC--CCchHHH-HHhhhcCCCCccccccccccCCC
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS--VPSSIQV-LLSPITGDSKFFSILSSVSNRMG  243 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  243 (348)
                          |.+.|+.+|.++|.+++.++++++++++++||++||||+....  ....+.. +.....+....+  .+   .+.+
T Consensus       136 ----p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~g~~  206 (310)
T 1eq2_A          136 ----PLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKL--FE---GSEN  206 (310)
T ss_dssp             ----CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-----------------
T ss_pred             ----CCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEE--ec---CCCc
Confidence                6778999999999999999988899999999999999986521  1123332 334444443222  22   3347


Q ss_pred             -CcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCccc-CC-CC--CCCccccChHHHHH
Q 035965          244 -SIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFE-GE-NQ--SSVPSVISSEKLKD  317 (348)
Q Consensus       244 -~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~-~~-~~--~~~~~~~~~~~~~~  317 (348)
                       .++|+|++|+|++++.+++++. ++.||++ ++++|+.|+++.+.+.+|...++... .. ..  ......+|++++++
T Consensus       207 ~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (310)
T 1eq2_A          207 FKRDFVYVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRA  285 (310)
T ss_dssp             -CBCEEEHHHHHHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHH
T ss_pred             ceEccEEHHHHHHHHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhhcccccccccchHHHHh
Confidence             8899999999999999999876 7789885 56999999999999998863121111 00 00  03456789999999


Q ss_pred             cCC-ccccChhHHHHHHHHHHHHc
Q 035965          318 LGF-NYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       318 LG~-~p~~~~~e~l~~~~~~~~~~  340 (348)
                      ||| .|..+++|+|+++++|++++
T Consensus       286 lG~~~~~~~l~~~l~~~~~~~~~~  309 (310)
T 1eq2_A          286 AGYDKPFKTVAEGVTEYMAWLNRD  309 (310)
T ss_dssp             TTCCCCCCCHHHHHHHHHHHTC--
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHhc
Confidence            999 78889999999999998653

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=2.4e-41  Score=333.25  Aligned_cols=324  Identities=16%  Similarity=0.142  Sum_probs=232.2

Q ss_pred             CCCCCcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-c-ccccc-CCCCCeEEEEccCCCcchHHHhh
Q 035965            1 MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-Q-IFSKW-TRSDRLRLFQADLQVEGSFDKAV   77 (348)
Q Consensus         1 m~~~~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~-~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~   77 (348)
                      |.....+.+++|+||||||+||||++|+++|+++|++|++++|+.... . ...+. ....+++++.+|++|.+++.+++
T Consensus         1 m~~~~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~   80 (699)
T 1z45_A            1 MTAQLQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVF   80 (699)
T ss_dssp             ----------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHH
T ss_pred             CCcccccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHH
Confidence            443333455678999999999999999999999999999999976432 1 11100 01246889999999999999988


Q ss_pred             c--CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           78 M--GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        78 ~--~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +  ++|+|||+|+..........     + ..++++|+.++.+++++|++.+ +++|||+||.++|+...... ...+++
T Consensus        81 ~~~~~D~Vih~A~~~~~~~~~~~-----~-~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~-~~~~~~  152 (699)
T 1z45_A           81 KEYKIDSVIHFAGLKAVGESTQI-----P-LRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFP-NMIPIP  152 (699)
T ss_dssp             HHSCCCEEEECCSCCCHHHHHHS-----H-HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGST-TCCSBC
T ss_pred             HhCCCCEEEECCcccCcCccccC-----H-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCcccc-ccCCcc
Confidence            8  89999999997653322122     3 3688999999999999999887 88999999998765432100 013667


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh--CCCcEEEEecCccccCCCCCC--------CCchHHHHHhhh
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE--NKIDLVSVITTTVAGPFLTSS--------VPSSIQVLLSPI  225 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~--------~~~~~~~~~~~~  225 (348)
                      |+.+..         |.+.|+.+|.++|.+++.++++  .+++++++||++||||.....        ...++..+.+..
T Consensus       153 E~~~~~---------p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~  223 (699)
T 1z45_A          153 EECPLG---------PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVA  223 (699)
T ss_dssp             TTSCCC---------CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHH
T ss_pred             ccCCCC---------CCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHH
Confidence            776543         6678999999999999998877  689999999999999864310        123444455555


Q ss_pred             cCCCCccccccc---cccCCCCcceeeHHHHHHHHHHhhcCC-------CCCceEEEe-ccCcChHHHHHHHHHhCCCCC
Q 035965          226 TGDSKFFSILSS---VSNRMGSIALVHIEDICNAHIFLMEND-------RAQGQYICC-VKSCPISEFIDHLKLEYPSSK  294 (348)
Q Consensus       226 ~~~~~~~~~~~~---~~~~~~~r~~i~v~D~a~~~~~~~~~~-------~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~  294 (348)
                      .+....+...|.   ...+.+.|+|||++|+|++++.++++.       ..+++||++ ++.+|+.|+++.+++.+|. +
T Consensus       224 ~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~-~  302 (699)
T 1z45_A          224 VGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI-D  302 (699)
T ss_dssp             TTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTC-C
T ss_pred             hcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCC-C
Confidence            443323333331   113457899999999999999988742       123578875 5689999999999999886 4


Q ss_pred             CCcccCCCCC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcCC
Q 035965          295 MQTFEGENQS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCGF  342 (348)
Q Consensus       295 ~~~~~~~~~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~~  342 (348)
                      .+........  .....+|++|++ +|||+|+++++|+|+++++|++++..
T Consensus       303 ~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~  353 (699)
T 1z45_A          303 LPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPF  353 (699)
T ss_dssp             CCC---------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             CCceecCCCCCccccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCc
Confidence            4432222111  446788999998 89999999999999999999988754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.5e-41  Score=304.96  Aligned_cols=302  Identities=18%  Similarity=0.138  Sum_probs=228.4

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCC-------CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERG-------YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   78 (348)
                      ..+++|+||||||+||||++|+++|+++|       ++|++++|+..+...    ....+++++.+|++|.+++.++++ 
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~   85 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA----GFSGAVDARAADLSAPGEAEKLVEA   85 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT----TCCSEEEEEECCTTSTTHHHHHHHT
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc----ccCCceeEEEcCCCCHHHHHHHHhc
Confidence            34567899999999999999999999999       899999997653311    012468899999999999999884 


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC----CcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE----SVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|+|||+|+...... ..+     + ..++++|+.++.+++++|++.+    .+++|||+||.++|+....     .++
T Consensus        86 ~~d~vih~A~~~~~~~-~~~-----~-~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~-----~~~  153 (342)
T 2hrz_A           86 RPDVIFHLAAIVSGEA-ELD-----F-DKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLP-----YPI  153 (342)
T ss_dssp             CCSEEEECCCCCHHHH-HHC-----H-HHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCC-----SSB
T ss_pred             CCCEEEECCccCcccc-ccc-----H-HHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCC-----CCc
Confidence            8999999999754211 112     3 4789999999999999998765    3689999999986654322     478


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCcccc-CCCCCCC-CchHH-HHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAG-PFLTSSV-PSSIQ-VLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G-~~~~~~~-~~~~~-~~~~~~~~~~~~  231 (348)
                      +|+++..         |.+.|+.+|.++|.+++.++++++++.+++|++.+|| |+..... ...+. .+.....+....
T Consensus       154 ~E~~~~~---------~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~  224 (342)
T 2hrz_A          154 PDEFHTT---------PLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAV  224 (342)
T ss_dssp             CTTCCCC---------CSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEE
T ss_pred             CCCCCCC---------CcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCee
Confidence            8887654         6678999999999999999988889999999999999 6643221 12222 233444554433


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC----CCceEEEeccCcChHHHHHHHHHhCCCCCC-CcccCCCCC--
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR----AQGQYICCVKSCPISEFIDHLKLEYPSSKM-QTFEGENQS--  304 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~----~~~~y~~~~~~~s~~el~~~i~~~~~~~~~-~~~~~~~~~--  304 (348)
                      ++..     +...++++|++|+|++++.+++.+.    .++.||++++.+|+.|+++.+.+.+|.... .+...+...  
T Consensus       225 ~~~~-----~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~  299 (342)
T 2hrz_A          225 LPVP-----ESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVALIRREPNEMIM  299 (342)
T ss_dssp             ECSC-----TTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHH
T ss_pred             ccCC-----CccceeeEehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcCcccccceeeccCcchh
Confidence            3311     1256679999999999999998764    356899877789999999999999875221 111111100  


Q ss_pred             ----CCccccChHHHHHcCCccccChhHHHHHHHHHHH
Q 035965          305 ----SVPSVISSEKLKDLGFNYKHGIEDIICQTIASCV  338 (348)
Q Consensus       305 ----~~~~~~~~~~~~~LG~~p~~~~~e~l~~~~~~~~  338 (348)
                          .....+|++|+++|||+|+++++|+|+++++|++
T Consensus       300 ~~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~  337 (342)
T 2hrz_A          300 RMCEGWAPGFEAKRARELGFTAESSFEEIIQVHIEDEL  337 (342)
T ss_dssp             HHHTTSCCCBCCHHHHHTTCCCCSSHHHHHHHHHHHHS
T ss_pred             hhhcccccccChHHHHHcCCCCCCCHHHHHHHHHHHhc
Confidence                1223579999989999999899999999999997

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=1.6e-41  Score=307.04  Aligned_cols=314  Identities=25%  Similarity=0.305  Sum_probs=228.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC--CCCCeEEE-EccCCCcchHHHhhcCCCEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT--RSDRLRLF-QADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~--~~~~~~~~-~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      .+++|+||||||+||||++|+++|+++|++|++++|+..+. .......  ...+++++ .+|++|.+++.++++++|+|
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   87 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence            45678999999999999999999999999999999976543 2111100  01468888 89999999999999999999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      ||+|+......   +     + ..++++|+.++.+++++|.+...+++|||+||.++++...... .+.+++|+++....
T Consensus        88 ih~A~~~~~~~---~-----~-~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~-~~~~~~E~~~~~~~  157 (342)
T 1y1p_A           88 AHIASVVSFSN---K-----Y-DEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNV-EGIYLDEKSWNLES  157 (342)
T ss_dssp             EECCCCCSCCS---C-----H-HHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTC-CCCEECTTCCCHHH
T ss_pred             EEeCCCCCCCC---C-----H-HHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCC-CCcccCccccCchh
Confidence            99999765431   2     3 3789999999999999998533378999999998775432100 02478888753311


Q ss_pred             hhh-------ccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCC--chHHHHHhhhcCCCCcc
Q 035965          164 HVW-------NKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVP--SSIQVLLSPITGDSKFF  232 (348)
Q Consensus       164 ~~~-------~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~  232 (348)
                      ...       ....|.+.|+.+|.++|.+++.+++++  +++++++||+++|||.......  ....++.....+....+
T Consensus       158 ~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (342)
T 1y1p_A          158 IDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA  237 (342)
T ss_dssp             HHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHH
T ss_pred             hhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccc
Confidence            100       001245789999999999999998774  7899999999999998764321  22233445555554332


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCc-eEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCCCCCccccC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQG-QYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVIS  311 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  311 (348)
                      .  +.   + +.|+|+|++|+|++++.+++++...+ .|+++++.+|+.|+++.+.+.+|...++...... ......+|
T Consensus       238 ~--~~---~-~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~-~~~~~~~d  310 (342)
T 1y1p_A          238 L--AL---M-PPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQ-GQDLSKFD  310 (342)
T ss_dssp             H--HT---C-CSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCC-CCCCCEEC
T ss_pred             c--cc---C-CcCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCcc-ccccccCC
Confidence            2  21   1 47889999999999999998765444 4566677899999999999999864333222111 12346789


Q ss_pred             hHHHH-HcCC---ccccChhHHHHHHHHHHH
Q 035965          312 SEKLK-DLGF---NYKHGIEDIICQTIASCV  338 (348)
Q Consensus       312 ~~~~~-~LG~---~p~~~~~e~l~~~~~~~~  338 (348)
                      ++|++ .|||   .+..+++|+|+++++|++
T Consensus       311 ~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~  341 (342)
T 1y1p_A          311 TAPSLEILKSLGRPGWRSIEESIKDLVGSET  341 (342)
T ss_dssp             CHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred             hHHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence            99998 7887   444599999999999874

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=8e-41  Score=327.15  Aligned_cols=311  Identities=18%  Similarity=0.263  Sum_probs=233.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcch-HHHhhcCCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGS-FDKAVMGCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~d~Vih   85 (348)
                      +++|+|||||||||||++|+++|+++ |++|++++|+..+. .+.    ...+++++.+|++|.++ +.++++++|+|||
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~----~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih  388 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----NHPHFHFVEGDISIHSEWIEYHVKKCDVVLP  388 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT----TCTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc----cCCceEEEECCCCCcHHHHHHhhcCCCEEEE
Confidence            35789999999999999999999998 89999999987543 221    12478999999999865 7778889999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +|+.........+     + ..++++|+.++.+++++|.+.+  ++|||+||.++|+....     .+++|+++....  
T Consensus       389 ~Aa~~~~~~~~~~-----~-~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~~~-----~~~~E~~~~~~~--  453 (660)
T 1z7e_A          389 LVAIATPIEYTRN-----P-LRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSD-----KYFDEDHSNLIV--  453 (660)
T ss_dssp             CCCCCCTHHHHHS-----H-HHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCS-----SSBCTTTCCEEE--
T ss_pred             CceecCccccccC-----H-HHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCCCC-----cccCCCcccccc--
Confidence            9997654322222     3 3788999999999999999887  89999999987654332     467887753211  


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC------CCchH-HHHHhhhcCCCCcccccccc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS------VPSSI-QVLLSPITGDSKFFSILSSV  238 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~  238 (348)
                      .+...|.+.|+.+|.++|.+++.++++.+++++++||++||||+....      ....+ .++.+...+.+..+  .+  
T Consensus       454 ~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~g--  529 (660)
T 1z7e_A          454 GPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL--ID--  529 (660)
T ss_dssp             CCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEE--EG--
T ss_pred             CcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEE--eC--
Confidence            011236678999999999999999888899999999999999986420      11222 23344555544322  22  


Q ss_pred             ccCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEec-c-CcChHHHHHHHHHhCCCCCC----Cccc----------
Q 035965          239 SNRMGSIALVHIEDICNAHIFLMENDR---AQGQYICCV-K-SCPISEFIDHLKLEYPSSKM----QTFE----------  299 (348)
Q Consensus       239 ~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~-~-~~s~~el~~~i~~~~~~~~~----~~~~----------  299 (348)
                       .+++.|+|+|++|+|++++.+++++.   .++.||+++ + ++|+.|+++.+.+.+|....    |...          
T Consensus       530 -~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~  608 (660)
T 1z7e_A          530 -GGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSY  608 (660)
T ss_dssp             -GGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHH
T ss_pred             -CCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhcccc
Confidence             23478999999999999999998764   356788865 4 79999999999998764221    2110          


Q ss_pred             -CC-CCCCCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcCCC
Q 035965          300 -GE-NQSSVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCGFL  343 (348)
Q Consensus       300 -~~-~~~~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~~~  343 (348)
                       .. ........+|++|++ +|||+|+++++|+|+++++|++++..+
T Consensus       609 ~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~~  655 (660)
T 1z7e_A          609 YGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL  655 (660)
T ss_dssp             HCTTCCCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSCC
T ss_pred             ccccccchhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhccc
Confidence             00 011345678999998 799999989999999999999987654

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=1.1e-41  Score=302.64  Aligned_cols=277  Identities=14%  Similarity=0.032  Sum_probs=215.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEEEcccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVFHVAAS   89 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih~a~~   89 (348)
                      |+|||||||||||++|+++|+ +|++|++++|+..               ++.+|+.|.+++.+++++  +|+|||+|+.
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~---------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~   64 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK---------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAH   64 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS---------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc---------------cccccCCCHHHHHHHHHhcCCCEEEECccc
Confidence            489999999999999999999 8999999999752               256899999999998876  9999999997


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      ........+     + ..++++|+.++.+++++|++.+ + +|||+||.++|+....     .+++|+++..        
T Consensus        65 ~~~~~~~~~-----~-~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~-----~~~~E~~~~~--------  123 (299)
T 1n2s_A           65 TAVDKAESE-----P-ELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGD-----IPWQETDATS--------  123 (299)
T ss_dssp             CCHHHHTTC-----H-HHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTT-----CCBCTTSCCC--------
T ss_pred             CCHhhhhcC-----H-HHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCC-----CCCCCCCCCC--------
Confidence            654322223     3 3789999999999999999888 5 8999999987665432     5788887654        


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHH-HHhhhcCCCCccccccccccCCCCccee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQV-LLSPITGDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                       |.+.|+.+|.++|.+++.++.    +++++||+++|||+...    .+.. +.....+...  ...+     ++.++|+
T Consensus       124 -p~~~Y~~sK~~~E~~~~~~~~----~~~ilRp~~v~G~~~~~----~~~~~~~~~~~~~~~--~~~~-----~~~~~~i  187 (299)
T 1n2s_A          124 -PLNVYGKTKLAGEKALQDNCP----KHLIFRTSWVYAGKGNN----FAKTMLRLAKERQTL--SVIN-----DQYGAPT  187 (299)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHCS----SEEEEEECSEECSSSCC----HHHHHHHHHHHCSEE--EEEC-----SCEECCE
T ss_pred             -CccHHHHHHHHHHHHHHHhCC----CeEEEeeeeecCCCcCc----HHHHHHHHHhcCCCE--Eeec-----CcccCCe
Confidence             677899999999999988743    89999999999997642    3332 3333344332  2122     2578899


Q ss_pred             eHHHHHHHHHHhhcCC--C--CCceEEEec-cCcChHHHHHHHHHhCCCCCC----C-ccc---CCC----CCCCccccC
Q 035965          249 HIEDICNAHIFLMEND--R--AQGQYICCV-KSCPISEFIDHLKLEYPSSKM----Q-TFE---GEN----QSSVPSVIS  311 (348)
Q Consensus       249 ~v~D~a~~~~~~~~~~--~--~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~----~-~~~---~~~----~~~~~~~~~  311 (348)
                      |++|+|++++.+++++  .  .++.||+++ +.+|+.|+++.+.+.+|....    + ...   ...    .......+|
T Consensus       188 ~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  267 (299)
T 1n2s_A          188 GAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLN  267 (299)
T ss_dssp             EHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBC
T ss_pred             eHHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeee
Confidence            9999999999999876  2  367898865 699999999999998864210    1 100   000    114567899


Q ss_pred             hHHHH-HcCCccccChhHHHHHHHHHHHHcCC
Q 035965          312 SEKLK-DLGFNYKHGIEDIICQTIASCVDCGF  342 (348)
Q Consensus       312 ~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~~  342 (348)
                      ++|++ .|||+|+ +++|+|+++++|++++..
T Consensus       268 ~~k~~~~lG~~p~-~~~~~l~~~~~~~~~~~~  298 (299)
T 1n2s_A          268 TEKFQRNFDLILP-QWELGVKRMLTEMFTTTT  298 (299)
T ss_dssp             CHHHHHHHTCCCC-BHHHHHHHHHHHHHSCCC
T ss_pred             HHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCC
Confidence            99999 7999999 999999999999998764

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=4.2e-41  Score=301.01  Aligned_cols=284  Identities=14%  Similarity=0.120  Sum_probs=192.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih~a   87 (348)
                      |+|+|||||||||||++|+++|+++|++|++++|+..+          ++  ++.+|++|.+++.+++++  +|+|||+|
T Consensus         1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A   68 (315)
T 2ydy_A            1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA   68 (315)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------CHHHHHHHCCSEEEECC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence            35799999999999999999999999999999986542          12  788999999988888874  89999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      +.........+     + ..++++|+.++.+++++|.+.+ . +|||+||.++|++ .     ..+++|+++..      
T Consensus        69 ~~~~~~~~~~~-----~-~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~-~-----~~~~~E~~~~~------  128 (315)
T 2ydy_A           69 AERRPDVVENQ-----P-DAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDG-T-----NPPYREEDIPA------  128 (315)
T ss_dssp             -------------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCS-S-----SCSBCTTSCCC------
T ss_pred             cccChhhhhcC-----H-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCC-C-----CCCCCCCCCCC------
Confidence            97654322222     3 4789999999999999999988 5 9999999997665 2     24788887654      


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHH-hhh-cCCCCccccccccccCCCCc
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLL-SPI-TGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~r  245 (348)
                         |.+.|+.+|.++|.+++.+    +++++++||+.|||+...... ..+..+. ... .+..  +...     +++.+
T Consensus       129 ---~~~~Y~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~--~~~~-----~~~~~  193 (315)
T 2ydy_A          129 ---PLNLYGKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEE-SAVTVMFDKVQFSNKS--ANMD-----HWQQR  193 (315)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGG-STTGGGHHHHHCCSSC--EEEE-----CSSBB
T ss_pred             ---CcCHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccc-cHHHHHHHHHHhcCCC--eeec-----cCceE
Confidence               6678999999999999886    467899999999999876210 1111122 222 3332  2211     23678


Q ss_pred             ceeeHHHHHHHHHHhhcCC----CCCceEEEec-cCcChHHHHHHHHHhCCCCCC---Cccc-CC--CCCCCccccChHH
Q 035965          246 ALVHIEDICNAHIFLMEND----RAQGQYICCV-KSCPISEFIDHLKLEYPSSKM---QTFE-GE--NQSSVPSVISSEK  314 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~----~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~~---~~~~-~~--~~~~~~~~~~~~~  314 (348)
                      +|+|++|+|++++.+++++    ..++.||+++ +++|+.|+++.+.+.+|....   +... ..  ........+|++|
T Consensus       194 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  273 (315)
T 2ydy_A          194 FPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSK  273 (315)
T ss_dssp             CCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHH
T ss_pred             CcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHH
Confidence            8999999999999998764    4577898754 699999999999999986321   1111 11  1113567889999


Q ss_pred             HHHcCCccccChhHHHHHHHHHHHHc
Q 035965          315 LKDLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       315 ~~~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      ++.+||+|.++++|+|+++++|++++
T Consensus       274 ~~~~G~~p~~~~~~~l~~~~~~~~~~  299 (315)
T 2ydy_A          274 LETLGIGQRTPFRIGIKESLWPFLID  299 (315)
T ss_dssp             HHHTTCCCCCCHHHHHHHHHGGGCC-
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHccc
Confidence            99559999999999999999999765

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=1e-40  Score=295.25  Aligned_cols=270  Identities=16%  Similarity=0.082  Sum_probs=210.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a   87 (348)
                      ..++|||||||||||++|+++|+++|++|++++|+.                   +|++|.+++.++++  ++|+|||+|
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-------------------~Dl~d~~~~~~~~~~~~~d~vih~A   71 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-------------------LDITNVLAVNKFFNEKKPNVVINCA   71 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-------------------CCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc-------------------CCCCCHHHHHHHHHhcCCCEEEECC
Confidence            357999999999999999999999999999999852                   79999999999888  799999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      +.........+     + ..++++|+.++.+++++|++.+ + +|||+||.++|+....     .+++|+++..      
T Consensus        72 ~~~~~~~~~~~-----~-~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~~~-----~~~~E~~~~~------  132 (292)
T 1vl0_A           72 AHTAVDKCEEQ-----Y-DLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGEAK-----EPITEFDEVN------  132 (292)
T ss_dssp             CCCCHHHHHHC-----H-HHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSCCS-----SCBCTTSCCC------
T ss_pred             ccCCHHHHhcC-----H-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCCCC-----CCCCCCCCCC------
Confidence            97654221122     3 4789999999999999999988 6 9999999987654432     4788887654      


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHH-hhhcCCCCccccccccccCCCCcc
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLL-SPITGDSKFFSILSSVSNRMGSIA  246 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~  246 (348)
                         |.+.|+.+|.++|.+++.++    .+++++||++|||| ..    ..+..+. ....+....+  .+     ++.++
T Consensus       133 ---~~~~Y~~sK~~~E~~~~~~~----~~~~~lR~~~v~G~-~~----~~~~~~~~~~~~~~~~~~--~~-----~~~~~  193 (292)
T 1vl0_A          133 ---PQSAYGKTKLEGENFVKALN----PKYYIVRTAWLYGD-GN----NFVKTMINLGKTHDELKV--VH-----DQVGT  193 (292)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHHC----SSEEEEEECSEESS-SS----CHHHHHHHHHHHCSEEEE--ES-----SCEEC
T ss_pred             ---CccHHHHHHHHHHHHHHhhC----CCeEEEeeeeeeCC-Cc----ChHHHHHHHHhcCCcEEe--ec-----CeeeC
Confidence               66789999999999998864    37999999999999 32    1232232 3333432222  22     25788


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEec-cCcChHHHHHHHHHhCCCCC----CCcccCCCC--CCCccccChHHHH-Hc
Q 035965          247 LVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSK----MQTFEGENQ--SSVPSVISSEKLK-DL  318 (348)
Q Consensus       247 ~i~v~D~a~~~~~~~~~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~-~L  318 (348)
                      |+|++|+|++++.+++++ .++.||+++ +++|+.|+++.+.+.+|...    +|.......  ......+|+++++ .|
T Consensus       194 ~i~v~Dva~~~~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  272 (292)
T 1vl0_A          194 PTSTVDLARVVLKVIDEK-NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTT  272 (292)
T ss_dssp             CEEHHHHHHHHHHHHHHT-CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTT
T ss_pred             CccHHHHHHHHHHHHhcC-CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHc
Confidence            999999999999999887 677898754 69999999999999988621    111110011  1346779999999 69


Q ss_pred             CCccccChhHHHHHHHHHHH
Q 035965          319 GFNYKHGIEDIICQTIASCV  338 (348)
Q Consensus       319 G~~p~~~~~e~l~~~~~~~~  338 (348)
                      ||+|+ +++|+|+++++|++
T Consensus       273 G~~p~-~~~~~l~~~~~~~~  291 (292)
T 1vl0_A          273 GDITR-EWKESLKEYIDLLQ  291 (292)
T ss_dssp             CCCCC-BHHHHHHHHHHHHT
T ss_pred             CCCCC-CHHHHHHHHHHHhc
Confidence            99999 99999999999985

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=1.9e-39  Score=295.99  Aligned_cols=300  Identities=14%  Similarity=0.102  Sum_probs=224.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC-----CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcC---CCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG-----YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMG---CDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~d~   82 (348)
                      +|+|||||||||||++|+++|+++|     ++|++++|+..+...     ...+++++.+|++|.+++.+++++   +|+
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~   75 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWH-----EDNPINYVQCDISDPDDSQAKLSPLTDVTH   75 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCC-----CSSCCEEEECCTTSHHHHHHHHTTCTTCCE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCcccc-----ccCceEEEEeecCCHHHHHHHHhcCCCCCE
Confidence            3689999999999999999999999     999999998654321     124789999999999999999987   999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEE-------EeccceeeeecCCCCCCCCc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVV-------LTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v-------~~SS~~~~~~~~~~~~~~~~  153 (348)
                      |||+|+....     +     + ..++++|+.++.+++++|++.  + +++||       |+||.++|+.... .  ..+
T Consensus        76 vih~a~~~~~-----~-----~-~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vyg~~~~-~--~~~  140 (364)
T 2v6g_A           76 VFYVTWANRS-----T-----E-QENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESYGKIES-H--DPP  140 (364)
T ss_dssp             EEECCCCCCS-----S-----H-HHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGTTTSCC-C--CSS
T ss_pred             EEECCCCCcc-----h-----H-HHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhcccccc-C--CCC
Confidence            9999997531     2     3 478999999999999999987  5 88997       7999886654321 1  247


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCC-CcEEEEecCccccCCCCCCCCchHHH-HHhhh---cCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENK-IDLVSVITTTVAGPFLTSSVPSSIQV-LLSPI---TGD  228 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~lR~~~v~G~~~~~~~~~~~~~-~~~~~---~~~  228 (348)
                      ++|+++..        ++.+.|    ..+|.+++.++++++ ++++++||++||||+........... +.+.+   .+.
T Consensus       141 ~~E~~~~~--------~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~  208 (364)
T 2v6g_A          141 YTEDLPRL--------KYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGK  208 (364)
T ss_dssp             BCTTSCCC--------SSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTC
T ss_pred             CCccccCC--------ccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCC
Confidence            88887543        124567    458999999887777 99999999999999876432322222 23333   454


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC-CCceEEEec-cCcChHHHHHHHHHhCCCCC------CCcc--
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR-AQGQYICCV-KSCPISEFIDHLKLEYPSSK------MQTF--  298 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~-~~~~y~~~~-~~~s~~el~~~i~~~~~~~~------~~~~--  298 (348)
                      +..+.  +.........+++|++|+|++++.+++++. .++.||+++ +++|+.|+++.+.+.+|...      +|..  
T Consensus       209 ~~~~~--g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~  286 (364)
T 2v6g_A          209 VLRFT--GCKAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQ  286 (364)
T ss_dssp             CBCCC--SCHHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHH
T ss_pred             ceecC--CCcccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHH
Confidence            43322  222101234678899999999999999875 355898865 48999999999999987522      2211  


Q ss_pred             ---------------cCC-CCC-----C----------Cc-cccChHHHHHcCCccccChhHHHHHHHHHHHHcCCCC
Q 035965          299 ---------------EGE-NQS-----S----------VP-SVISSEKLKDLGFNYKHGIEDIICQTIASCVDCGFLP  344 (348)
Q Consensus       299 ---------------~~~-~~~-----~----------~~-~~~~~~~~~~LG~~p~~~~~e~l~~~~~~~~~~~~~~  344 (348)
                                     ... .+.     .          .. ..+|++|+++|||+|.++++|+|+++++|+++.+.+|
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~lp  364 (364)
T 2v6g_A          287 DLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP  364 (364)
T ss_dssp             HHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTSCC
T ss_pred             HHHhhhHHHHHHHHHHhCCCccccccccccchhhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence                           000 010     1          34 5789999999999998899999999999999999875

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.3e-39  Score=286.44  Aligned_cols=277  Identities=18%  Similarity=0.169  Sum_probs=200.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccCc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASME   91 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~~   91 (348)
                      |||||||||||||++|+++|+++||+|++++|++.+.          .   +..|    +...+.++++|+|||+|+...
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----------~---~~~~----~~~~~~l~~~d~vihla~~~i   63 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----------R---ITWD----ELAASGLPSCDAAVNLAGENI   63 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------E---EEHH----HHHHHCCCSCSEEEECCCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----------e---eecc----hhhHhhccCCCEEEEeccCcc
Confidence            6899999999999999999999999999999976532          1   2222    223455778999999998532


Q ss_pred             ccc---ccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           92 FDI---NVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        92 ~~~---~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      ...   +...     ....+++.|+.+|.+|+++++..+ ...++|+.||+++|+....     .+.+|+++..      
T Consensus        64 ~~~~~~~~~~-----~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~-----~~~~E~~p~~------  127 (298)
T 4b4o_A           64 LNPLRRWNET-----FQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLT-----AEYDEDSPGG------  127 (298)
T ss_dssp             SCTTSCCCHH-----HHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSS-----CCBCTTCCCS------
T ss_pred             cchhhhhhhh-----hhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCC-----CcccccCCcc------
Confidence            221   1111     224678899999999999998876 2445888999886554433     5788887654      


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcce
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIAL  247 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  247 (348)
                         +.+.|+..|...|...  .....+++++++||+.||||+...    ....+.....+....+      +.+++.++|
T Consensus       128 ---~~~~~~~~~~~~e~~~--~~~~~~~~~~~~r~~~v~g~~~~~----~~~~~~~~~~~~~~~~------g~g~~~~~~  192 (298)
T 4b4o_A          128 ---DFDFFSNLVTKWEAAA--RLPGDSTRQVVVRSGVVLGRGGGA----MGHMLLPFRLGLGGPI------GSGHQFFPW  192 (298)
T ss_dssp             ---CSSHHHHHHHHHHHHH--CCSSSSSEEEEEEECEEECTTSHH----HHHHHHHHHTTCCCCB------TTSCSBCCE
T ss_pred             ---ccchhHHHHHHHHHHH--HhhccCCceeeeeeeeEEcCCCCc----hhHHHHHHhcCCccee------cccCceeec
Confidence               5567888777777543  334568999999999999997431    1222222333333222      255689999


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCC---CCccc-----CCCCC---CCccccChHHH
Q 035965          248 VHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSK---MQTFE-----GENQS---SVPSVISSEKL  315 (348)
Q Consensus       248 i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~---~~~~~-----~~~~~---~~~~~~~~~~~  315 (348)
                      ||++|+|+++..+++++...|+||++ ++++|+.|+++.+++.+++..   +|.+.     ++...   ..+...+++|+
T Consensus       193 ihv~Dva~a~~~~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl  272 (298)
T 4b4o_A          193 IHIGDLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRT  272 (298)
T ss_dssp             EEHHHHHHHHHHHHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHH
T ss_pred             CcHHHHHHHHHHHHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHH
Confidence            99999999999999999888999885 569999999999999998622   22111     11100   23456788999


Q ss_pred             HHcCCcccc-ChhHHHHHHHHH
Q 035965          316 KDLGFNYKH-GIEDIICQTIAS  336 (348)
Q Consensus       316 ~~LG~~p~~-~~~e~l~~~~~~  336 (348)
                      +++||+++| +++++|+++++.
T Consensus       273 ~~~Gf~f~yp~l~~al~~l~~~  294 (298)
T 4b4o_A          273 LATGYQYSFPELGAALKEIAEN  294 (298)
T ss_dssp             HHTTCCCSCCSHHHHHHHHHHC
T ss_pred             HHCCCCCCCCCHHHHHHHHHHh
Confidence            999999999 799999988874

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.7e-37  Score=295.15  Aligned_cols=281  Identities=13%  Similarity=0.112  Sum_probs=203.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      +|+|||||||||||++|+++|+++|++|++++|+..+.            ..+.+|+.+.  +.++++++|+|||+|+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~------------~~v~~d~~~~--~~~~l~~~D~Vih~A~~~  212 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP------------GKRFWDPLNP--ASDLLDGADVLVHLAGEP  212 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT------------TCEECCTTSC--CTTTTTTCSEEEECCCC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc------------cceeecccch--hHHhcCCCCEEEECCCCc
Confidence            78999999999999999999999999999999987532            2266787753  456678999999999975


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHH-HhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKA-CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~-~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      ........     ....++++|+.++.+++++ +++.+ +++|||+||+++|+....    ..+++|+.+.         
T Consensus       213 ~~~~~~~~-----~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~~~----~~~~~E~~~~---------  273 (516)
T 3oh8_A          213 IFGRFNDS-----HKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHDRG----DEILTEESES---------  273 (516)
T ss_dssp             ----CCGG-----GHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSEEE----EEEECTTSCC---------
T ss_pred             cccccchh-----HHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCCCC----CCccCCCCCC---------
Confidence            43321122     2247889999999999999 55555 899999999997652222    2478888753         


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhc-CCCCccccccccccCCCCccee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPIT-GDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                       +.+.|+.+|...|..+.. ++..|++++++||++||||+..     .+..+..... +....      .+.+++.++||
T Consensus       274 -~~~~y~~~~~~~E~~~~~-~~~~gi~~~ilRp~~v~Gp~~~-----~~~~~~~~~~~g~~~~------~g~g~~~~~~i  340 (516)
T 3oh8_A          274 -GDDFLAEVCRDWEHATAP-ASDAGKRVAFIRTGVALSGRGG-----MLPLLKTLFSTGLGGK------FGDGTSWFSWI  340 (516)
T ss_dssp             -CSSHHHHHHHHHHHTTHH-HHHTTCEEEEEEECEEEBTTBS-----HHHHHHHTTC---CCC------CTTSCCEECEE
T ss_pred             -CcChHHHHHHHHHHHHHH-HHhCCCCEEEEEeeEEECCCCC-----hHHHHHHHHHhCCCcc------cCCCCceEceE
Confidence             456799999999987655 4557999999999999999742     3333333332 22221      22445889999


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCC---CCccc-----CCC--CC--CCccccChHHH
Q 035965          249 HIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSK---MQTFE-----GEN--QS--SVPSVISSEKL  315 (348)
Q Consensus       249 ~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~---~~~~~-----~~~--~~--~~~~~~~~~~~  315 (348)
                      |++|+|++++.+++++..++.||++ ++.+|+.|+++.+++.+|...   +|...     ++.  ..  .....++++++
T Consensus       341 ~v~Dva~ai~~~l~~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl  420 (516)
T 3oh8_A          341 AIDDLTDIYYRAIVDAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAAL  420 (516)
T ss_dssp             EHHHHHHHHHHHHHCTTCCEEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHH
T ss_pred             eHHHHHHHHHHHHhCcccCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHH
Confidence            9999999999999988778899875 569999999999999887522   22111     111  00  23456788999


Q ss_pred             HHcCCccccC-hhHHHHHHHHHH
Q 035965          316 KDLGFNYKHG-IEDIICQTIASC  337 (348)
Q Consensus       316 ~~LG~~p~~~-~~e~l~~~~~~~  337 (348)
                      ++|||+|+++ ++++|+++++..
T Consensus       421 ~~lG~~~~~~~l~e~l~~~l~~~  443 (516)
T 3oh8_A          421 ENLSHTFRYTDIGAAIAHELGYE  443 (516)
T ss_dssp             HHTTCCCSCSSHHHHHHHHHTCC
T ss_pred             HHCCCCCCCCCHHHHHHHHhCcc
Confidence            9999999996 999999998753

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=3.6e-36  Score=280.06  Aligned_cols=305  Identities=12%  Similarity=0.112  Sum_probs=213.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc----cccc----------ccCCCCCeEEEEccCCCcchHH
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL----QIFS----------KWTRSDRLRLFQADLQVEGSFD   74 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~----------~~~~~~~~~~~~~Dl~d~~~~~   74 (348)
                      +.+|+|||||||||||++|+++|++.|++|++++|+....    .+..          ......++.++.+|++|++.+.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            4567999999999999999999999999999999987622    1100          0001257999999999988887


Q ss_pred             HhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           75 KAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        75 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                       .+.++|+|||+|+......         .....+++|+.++.+++++|.+ + .++|||+||.++ +..........++
T Consensus       147 -~~~~~d~Vih~A~~~~~~~---------~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~-G~~~~~~~~~~~~  213 (427)
T 4f6c_A          147 -LPENMDTIIHAGARTDHFG---------DDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV-GTYFDIDTEDVTF  213 (427)
T ss_dssp             -CSSCCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGG-GSEECSSCSCCEE
T ss_pred             -CcCCCCEEEECCcccCCCC---------CHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHh-CCCccCCCCCccc
Confidence             7778999999999765332         2248899999999999999998 5 799999999986 3221111114578


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCC-----chH-HHHHhhhcCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVP-----SSI-QVLLSPITGD  228 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~-----~~~-~~~~~~~~~~  228 (348)
                      +|+++...      ..+.+.|+.+|+++|.+++.+++ .+++++++||++|||+.......     ..+ ..+.....+.
T Consensus       214 ~E~~~~~~------~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (427)
T 4f6c_A          214 SEADVYKG------QLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLD  286 (427)
T ss_dssp             CTTCSCSS------CCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSS
T ss_pred             cccccccC------CCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcC
Confidence            88876321      12678899999999999999865 68999999999999998765311     112 2233333333


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcc--c-----C
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTF--E-----G  300 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~--~-----~  300 (348)
                      .  ++ .+   .+++.++|+|++|+|++++.++..+..+++||++ ++++++.|+++.+.+ ++-..++..  .     .
T Consensus       287 ~--~~-~~---~~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g~~~~~~~~~~~~l~~~  359 (427)
T 4f6c_A          287 C--IG-VS---MAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KEIELVSDESFNEILQKQ  359 (427)
T ss_dssp             E--EE-HH---HHTCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SCCEEECHHHHHHHHHHT
T ss_pred             C--CC-Cc---cccceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cCCcccCHHHHHHHHHhc
Confidence            2  22 11   1347889999999999999999988777789875 569999999999998 441111110  0     0


Q ss_pred             CCC----------CCCccccChHHH----HHcCCccccChhHHHHHHHHHHHHc
Q 035965          301 ENQ----------SSVPSVISSEKL----KDLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       301 ~~~----------~~~~~~~~~~~~----~~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      ...          ......+|+++.    +++||.+....++.++++++++++.
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~  413 (427)
T 4f6c_A          360 DMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI  413 (427)
T ss_dssp             TCHHHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred             CchhhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            000          012345555553    4689998855566899999988764

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=4.6e-36  Score=255.62  Aligned_cols=221  Identities=19%  Similarity=0.229  Sum_probs=172.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      ||+|||||||||||++|+++|+++|++|++++|++.+....     .++++++.+|++|.+++.++++++|+|||+|+..
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~   78 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-----NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG   78 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-----CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-----cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence            57999999999999999999999999999999987654111     1479999999999999999999999999999754


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA  170 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  170 (348)
                      ..           . ..++++|+.++.++++++++.+ +++|||+||.++++..+.      ...|+.+.         .
T Consensus        79 ~~-----------~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~------~~~~~~~~---------~  130 (227)
T 3dhn_A           79 WN-----------N-PDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPG------LRLMDSGE---------V  130 (227)
T ss_dssp             -----------------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETT------EEGGGTTC---------S
T ss_pred             CC-----------C-hhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCC------CccccCCc---------c
Confidence            21           1 2578999999999999999998 889999999987776654      22333322         2


Q ss_pred             CcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeH
Q 035965          171 SGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI  250 (348)
Q Consensus       171 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v  250 (348)
                      |.+.|+.+|.++|.+++.++++.+++++++||+++|||+.....         ...+....+.      .+ ..++|+|+
T Consensus       131 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~---------~~~~~~~~~~------~~-~~~~~i~~  194 (227)
T 3dhn_A          131 PENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGR---------YRLGKDDMIV------DI-VGNSHISV  194 (227)
T ss_dssp             CGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCC---------CEEESSBCCC------CT-TSCCEEEH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCccccc---------eeecCCCccc------CC-CCCcEEeH
Confidence            66789999999999999998888999999999999999865431         1112222222      11 12779999


Q ss_pred             HHHHHHHHHhhcCCCC-CceEEEec-cCcChH
Q 035965          251 EDICNAHIFLMENDRA-QGQYICCV-KSCPIS  280 (348)
Q Consensus       251 ~D~a~~~~~~~~~~~~-~~~y~~~~-~~~s~~  280 (348)
                      +|+|++++.+++++.. +++|++++ ++.++.
T Consensus       195 ~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          195 EDYAAAMIDELEHPKHHQERFTIGYLEHHHHH  226 (227)
T ss_dssp             HHHHHHHHHHHHSCCCCSEEEEEECCSCCC--
T ss_pred             HHHHHHHHHHHhCccccCcEEEEEeehhcccC
Confidence            9999999999999876 55787754 576654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=6.5e-36  Score=261.81  Aligned_cols=261  Identities=15%  Similarity=0.101  Sum_probs=198.2

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEEEcccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVFHVAAS   89 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih~a~~   89 (348)
                      |+|||||||||||++++++|+ +|++|++++|++...         ++   +.+|++|++++.+++++  +|+|||+|+.
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~---------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~   67 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ---------GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAM   67 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT---------TC---EECCTTSHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC---------CC---ceeccCCHHHHHHHHHhcCCCEEEECCcc
Confidence            479999999999999999999 589999999976421         12   88999999999998875  9999999997


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      ........+     + ...+++|+.++.++++++++.+ . +|||+||.++|++..      .+++|+++..        
T Consensus        68 ~~~~~~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~------~~~~e~~~~~--------  125 (273)
T 2ggs_A           68 TDVDKCEIE-----K-EKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEK------GNYKEEDIPN--------  125 (273)
T ss_dssp             CCHHHHHHC-----H-HHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSS------CSBCTTSCCC--------
T ss_pred             cChhhhhhC-----H-HHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCC------CCcCCCCCCC--------
Confidence            654321122     3 4789999999999999999887 4 999999998765432      2677877543        


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHH-HhhhcCCCCccccccccccCCCCccee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVL-LSPITGDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                       |.+.|+.+|.++|.+++.      ++++++||+.|||+  .    .....+ .....+....+.  +     . .++++
T Consensus       126 -~~~~Y~~sK~~~e~~~~~------~~~~~iR~~~v~G~--~----~~~~~~~~~~~~~~~~~~~--~-----~-~~~~~  184 (273)
T 2ggs_A          126 -PINYYGLSKLLGETFALQ------DDSLIIRTSGIFRN--K----GFPIYVYKTLKEGKTVFAF--K-----G-YYSPI  184 (273)
T ss_dssp             -CSSHHHHHHHHHHHHHCC------TTCEEEEECCCBSS--S----SHHHHHHHHHHTTCCEEEE--S-----C-EECCC
T ss_pred             -CCCHHHHHHHHHHHHHhC------CCeEEEeccccccc--c----HHHHHHHHHHHcCCCEEee--c-----C-CCCce
Confidence             667899999999998866      57899999999982  1    122222 233334332221  1     1 56799


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcc----cCCCCC--CCccccChHHHH-HcCCc
Q 035965          249 HIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTF----EGENQS--SVPSVISSEKLK-DLGFN  321 (348)
Q Consensus       249 ~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~-~LG~~  321 (348)
                      |++|+|++++.+++++. ++.|+++++.+|+.|+++.+.+.+|.. .+..    .....+  .....+|++|++ .|||+
T Consensus       185 ~~~dva~~i~~~~~~~~-~g~~~i~~~~~s~~e~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~  262 (273)
T 2ggs_A          185 SARKLASAILELLELRK-TGIIHVAGERISRFELALKIKEKFNLP-GEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTD  262 (273)
T ss_dssp             BHHHHHHHHHHHHHHTC-CEEEECCCCCEEHHHHHHHHHHHTTCC-SCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSC
T ss_pred             EHHHHHHHHHHHHhcCc-CCeEEECCCcccHHHHHHHHHHHhCCC-hhhcccccccccccCCCcccccCHHHHHHHhCCC
Confidence            99999999999998764 668988668999999999999999862 2211    101111  456789999999 79999


Q ss_pred             c-ccChhHHH
Q 035965          322 Y-KHGIEDII  330 (348)
Q Consensus       322 p-~~~~~e~l  330 (348)
                      | .++++++|
T Consensus       263 p~~~~l~~~~  272 (273)
T 2ggs_A          263 FYTLDLDGMV  272 (273)
T ss_dssp             CCSCCGGGCC
T ss_pred             CCCccccccc
Confidence            9 57998865

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=1.5e-35  Score=281.65  Aligned_cols=304  Identities=13%  Similarity=0.130  Sum_probs=215.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-------------ccCCCCCeEEEEccCCCcchHHH
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-------------KWTRSDRLRLFQADLQVEGSFDK   75 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-------------~~~~~~~~~~~~~Dl~d~~~~~~   75 (348)
                      .+|+|||||||||||++|+++|++.|++|++++|+..+. ...+             .....++++++.+|+.|++.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            468999999999999999999998899999999987632 1000             0012358999999999988777 


Q ss_pred             hhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           76 AVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        76 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +..++|+|||+|+......         +...++++|+.++.+++++|.+ + .++|||+||.++ +..........+++
T Consensus       228 ~~~~~D~Vih~Aa~~~~~~---------~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~v-G~~~~~~~~~~~~~  295 (508)
T 4f6l_B          228 LPENMDTIIHAGARTDHFG---------DDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV-GTYFDIDTEDVTFS  295 (508)
T ss_dssp             CSSCCSEEEECCCC-----------------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCT-TSEECTTCSCCEEC
T ss_pred             CccCCCEEEECCceecCCC---------CHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhh-ccCCccCCcCcccc
Confidence            6778999999999765332         3347889999999999999998 4 689999999986 22111111135788


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC-----CchHH-HHHhhhcCCC
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV-----PSSIQ-VLLSPITGDS  229 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~-----~~~~~-~~~~~~~~~~  229 (348)
                      |+++...      ..+.+.|+.+|+++|.+++.+++ .|++++++||++|||+......     ...+. .+.....+. 
T Consensus       296 E~~~~~~------~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~-  367 (508)
T 4f6l_B          296 EADVYKG------QLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLD-  367 (508)
T ss_dssp             TTCSCSS------BCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCS-
T ss_pred             ccccccc------ccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcC-
Confidence            8876321      12668899999999999999865 6999999999999999876531     11232 233333332 


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCc--cc-----CC
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQT--FE-----GE  301 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~--~~-----~~  301 (348)
                       .++ .+   .+++.++|+|++|+|++++.++.++..+++||++ ++++++.|+++.+.+.. -..++.  +.     ..
T Consensus       368 -~~~-~~---~g~~~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~-~~~~~~~~w~~~l~~~~  441 (508)
T 4f6l_B          368 -CIG-VS---MAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE-IELVSDESFNEILQKQD  441 (508)
T ss_dssp             -EEE-TT---GGGSEEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC-CEEECHHHHHHHHHTTC
T ss_pred             -CCC-CC---ccCceEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC-CcccCHHHHHHHHHhcC
Confidence             222 11   1347889999999999999999988777789875 56899999999999764 111110  00     00


Q ss_pred             CC----------CCCccccChHH----HHHcCCccccChhHHHHHHHHHHHHc
Q 035965          302 NQ----------SSVPSVISSEK----LKDLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       302 ~~----------~~~~~~~~~~~----~~~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      ..          ......+|+++    ++++||.+....++.++++++|+++.
T Consensus       442 ~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~  494 (508)
T 4f6l_B          442 MYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI  494 (508)
T ss_dssp             CHHHHHHHHTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHH
T ss_pred             CccchhcccccccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence            00          01234455555    44689998866688899999988763

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=9.5e-36  Score=269.13  Aligned_cols=236  Identities=17%  Similarity=0.207  Sum_probs=187.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC-CC-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER-GY-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~-g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      +++|+|||||||||||++|+++|+++ |+ +|++++|++.+. ...... ...+++++.+|++|.+++.++++++|+|||
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih   97 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEF-NDPRMRFFIGDVRDLERLNYALEGVDICIH   97 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHH-CCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence            45689999999999999999999999 97 999999986543 221111 124799999999999999999999999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +||..........     + ..++++|+.++.+++++|.+.+ +++||++||..++.                       
T Consensus        98 ~Aa~~~~~~~~~~-----~-~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~~-----------------------  147 (344)
T 2gn4_A           98 AAALKHVPIAEYN-----P-LECIKTNIMGASNVINACLKNA-ISQVIALSTDKAAN-----------------------  147 (344)
T ss_dssp             CCCCCCHHHHHHS-----H-HHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSS-----------------------
T ss_pred             CCCCCCCCchhcC-----H-HHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccCC-----------------------
Confidence            9997653322222     4 3789999999999999999998 89999999975321                       


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHH-hhhcCC-CCcccccccccc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLL-SPITGD-SKFFSILSSVSN  240 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~  240 (348)
                           |.+.|+.+|.++|.+++.++++   .+++++++||++|||+...     .+..+. ....|. +..+.      .
T Consensus       148 -----p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~-----~i~~~~~~~~~g~~~~~i~------~  211 (344)
T 2gn4_A          148 -----PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS-----VVPFFKKLVQNKASEIPIT------D  211 (344)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS-----HHHHHHHHHHHTCCCEEES------C
T ss_pred             -----CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC-----HHHHHHHHHHcCCCceEEe------C
Confidence                 3467999999999999998864   5799999999999998642     333333 333444 22222      2


Q ss_pred             CCCCcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCC
Q 035965          241 RMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYP  291 (348)
Q Consensus       241 ~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~  291 (348)
                      +.+.|+|+|++|+|++++.+++++..+++|++++..+|+.|+++.+.+.++
T Consensus       212 ~~~~r~~i~v~D~a~~v~~~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          212 IRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKALAPNTP  262 (344)
T ss_dssp             TTCEEEEECHHHHHHHHHHHHHHCCSSCEEEECCCEEEHHHHHHHHCTTCC
T ss_pred             CCeEEeeEEHHHHHHHHHHHHhhccCCCEEecCCCcEEHHHHHHHHHHhCC
Confidence            346789999999999999999987656689988778999999999987653

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=2.2e-35  Score=257.73  Aligned_cols=236  Identities=17%  Similarity=0.111  Sum_probs=187.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      ||+|||||||||||++|+++|+++|++|++++|++.+..       ..+++++.+|++|.+++.++++++|+|||+|+..
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~   74 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-------EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVS   74 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-------CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-------CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCC
Confidence            679999999999999999999999999999999765321       1367899999999999999999999999999975


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA  170 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  170 (348)
                      ..    ..     . ...+++|+.++.++++++++.+ +++|||+||..+++..+.    ..+++|+++..         
T Consensus        75 ~~----~~-----~-~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~----~~~~~E~~~~~---------  130 (267)
T 3ay3_A           75 VE----RP-----W-NDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPR----TTRIDTEVPRR---------  130 (267)
T ss_dssp             SC----CC-----H-HHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBT----TSCBCTTSCCC---------
T ss_pred             CC----CC-----H-HHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCC----CCCCCCCCCCC---------
Confidence            21    11     2 4789999999999999999887 889999999987755433    35788887654         


Q ss_pred             CcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeH
Q 035965          171 SGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI  250 (348)
Q Consensus       171 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v  250 (348)
                      |.+.|+.+|..+|.+++.++++++++++++||+++|+...                        .     +...++|+|+
T Consensus       131 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~------------------------~-----~~~~~~~~~~  181 (267)
T 3ay3_A          131 PDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK------------------------D-----ARMMATWLSV  181 (267)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC------------------------S-----HHHHHHBCCH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC------------------------C-----CCeeeccccH
Confidence            6678999999999999999888899999999999994210                        0     0124569999


Q ss_pred             HHHHHHHHHhhcCCCCC-ceEEEeccCcChHHHHHHHHHhCCCCCCCcccCCCCCCCccccChHHHHHcCCccccChhHH
Q 035965          251 EDICNAHIFLMENDRAQ-GQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLKDLGFNYKHGIEDI  329 (348)
Q Consensus       251 ~D~a~~~~~~~~~~~~~-~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~~p~~~~~e~  329 (348)
                      +|+|++++.+++++..+ ++|++.++.                             .....+..+++.|||+|+++++++
T Consensus       182 ~dva~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~d~~~~~~lg~~p~~~~~~~  232 (267)
T 3ay3_A          182 DDFMRLMKRAFVAPKLGCTVVYGASAN-----------------------------TESWWDNDKSAFLGWVPQDSSEIW  232 (267)
T ss_dssp             HHHHHHHHHHHHSSCCCEEEEEECCSC-----------------------------SSCCBCCGGGGGGCCCCCCCGGGG
T ss_pred             HHHHHHHHHHHhCCCCCceeEecCCCc-----------------------------cccccCHHHHHHcCCCCCCCHHHH
Confidence            99999999999987553 456553210                             012234444477999999999999


Q ss_pred             HHHHHH
Q 035965          330 ICQTIA  335 (348)
Q Consensus       330 l~~~~~  335 (348)
                      ++++.+
T Consensus       233 ~~~~~~  238 (267)
T 3ay3_A          233 REEIEQ  238 (267)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            988765

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.5e-34  Score=270.81  Aligned_cols=265  Identities=16%  Similarity=0.153  Sum_probs=191.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC---CCeEEEEEcCCCcc-cccc---ccC-------------CCCCeEEEEccCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER---GYIVHATVRDPGKL-QIFS---KWT-------------RSDRLRLFQADLQ   68 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~---g~~V~~~~r~~~~~-~~~~---~~~-------------~~~~~~~~~~Dl~   68 (348)
                      ..+|+|||||||||||++|+++|+++   |++|++++|+.... ....   ...             ...+++++.+|++
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            45789999999999999999999999   99999999987643 1111   000             1257999999998


Q ss_pred             ------CcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeee
Q 035965           69 ------VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTIT  142 (348)
Q Consensus        69 ------d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~  142 (348)
                            |.+.+.++++++|+|||+|+.... .         +....+++|+.++.+++++|.+.+ +++|||+||.++|+
T Consensus       151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-~---------~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~  219 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNA-F---------PYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGA  219 (478)
T ss_dssp             SGGGGCCHHHHHHHHHHCCEEEECCSSCSB-S---------SCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGT
T ss_pred             CcccCCCHHHHHHHHcCCCEEEECccccCC-c---------CHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcC
Confidence                  556788888899999999998765 2         224788999999999999999988 88999999998654


Q ss_pred             ecCCCCCCCCcccCCCCCCcchh--hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC---CCch
Q 035965          143 AKDSSGEWRPVVDESCQTPIHHV--WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS---VPSS  217 (348)
Q Consensus       143 ~~~~~~~~~~~~~E~~~~~~~~~--~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~---~~~~  217 (348)
                      .. .    ..+++|+.+..+...  .......+.|+.+|+++|.+++.++++.+++++++||++|||+.....   ...+
T Consensus       220 ~~-~----~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~  294 (478)
T 4dqv_A          220 AI-E----PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDW  294 (478)
T ss_dssp             TS-C----TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBH
T ss_pred             cc-C----CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHH
Confidence            33 2    246777764321100  000112356999999999999999987899999999999999865221   2223


Q ss_pred             HHHHH-hhhc-CCC-Ccccc-ccccccCCCCcceeeHHHHHHHHHHhhcC----C-CCCceEEEec-cC--cChHHHHHH
Q 035965          218 IQVLL-SPIT-GDS-KFFSI-LSSVSNRMGSIALVHIEDICNAHIFLMEN----D-RAQGQYICCV-KS--CPISEFIDH  285 (348)
Q Consensus       218 ~~~~~-~~~~-~~~-~~~~~-~~~~~~~~~~r~~i~v~D~a~~~~~~~~~----~-~~~~~y~~~~-~~--~s~~el~~~  285 (348)
                      +..+. .... |.. ..+.. .+....+++.++|||++|+|++++.++.+    + ..+++||+++ +.  +|+.|+++.
T Consensus       295 ~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~  374 (478)
T 4dqv_A          295 VTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDW  374 (478)
T ss_dssp             HHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHH
T ss_pred             HHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHH
Confidence            32222 2222 221 11111 11111235788999999999999999875    3 3356798865 45  999999999


Q ss_pred             HHHh
Q 035965          286 LKLE  289 (348)
Q Consensus       286 i~~~  289 (348)
                      +.+.
T Consensus       375 l~~~  378 (478)
T 4dqv_A          375 LIEA  378 (478)
T ss_dssp             HHHT
T ss_pred             HHHc
Confidence            9996

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=1.2e-34  Score=255.64  Aligned_cols=254  Identities=16%  Similarity=0.175  Sum_probs=192.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |+|||||||||||++|+++|+++  |++|++++|++.+. .+..     .+++++.+|++|++++.++++++|+|||+|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   75 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-----QGVEVRHGDYNQPESLQKAFAGVSKLLFISG   75 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-----TTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-----cCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence            57999999999999999999998  99999999987654 2211     3688999999999999999999999999998


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      ..   .         .  .  +.|+.++.+++++|++.+ +++|||+||.+++.   .                      
T Consensus        76 ~~---~---------~--~--~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~---~----------------------  113 (287)
T 2jl1_A           76 PH---Y---------D--N--TLLIVQHANVVKAARDAG-VKHIAYTGYAFAEE---S----------------------  113 (287)
T ss_dssp             CC---S---------C--H--HHHHHHHHHHHHHHHHTT-CSEEEEEEETTGGG---C----------------------
T ss_pred             CC---c---------C--c--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCC---C----------------------
Confidence            52   1         1  1  568999999999999988 89999999987531   1                      


Q ss_pred             CCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCccee
Q 035965          169 KASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       169 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                        | ..|+.+|..+|.+++.    .+++++++||+.++|+...    ..+   ...+......+.      .+++.++|+
T Consensus       114 --~-~~y~~~K~~~E~~~~~----~~~~~~ilrp~~~~~~~~~----~~~---~~~~~~~~~~~~------~~~~~~~~i  173 (287)
T 2jl1_A          114 --I-IPLAHVHLATEYAIRT----TNIPYTFLRNALYTDFFVN----EGL---RASTESGAIVTN------AGSGIVNSV  173 (287)
T ss_dssp             --C-STHHHHHHHHHHHHHH----TTCCEEEEEECCBHHHHSS----GGG---HHHHHHTEEEES------CTTCCBCCB
T ss_pred             --C-CchHHHHHHHHHHHHH----cCCCeEEEECCEeccccch----hhH---HHHhhCCceecc------CCCCccCcc
Confidence              1 2599999999998864    6899999999998886421    121   122221211111      234678899


Q ss_pred             eHHHHHHHHHHhhcCCCC-CceEEEec-cCcChHHHHHHHHHhCCCCCCCcccCC------------CCC----------
Q 035965          249 HIEDICNAHIFLMENDRA-QGQYICCV-KSCPISEFIDHLKLEYPSSKMQTFEGE------------NQS----------  304 (348)
Q Consensus       249 ~v~D~a~~~~~~~~~~~~-~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~~~~------------~~~----------  304 (348)
                      |++|+|++++.+++++.. ++.|++++ +.+|+.|+++.+.+.+|. +.+....+            .+.          
T Consensus       174 ~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (287)
T 2jl1_A          174 TRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGK-KVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIY  252 (287)
T ss_dssp             CHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSS-CCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCC-cceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence            999999999999988654 55788865 599999999999999886 33221111            010          


Q ss_pred             ----CCccccChHHHH-HcCCccccChhHHHHHHHH
Q 035965          305 ----SVPSVISSEKLK-DLGFNYKHGIEDIICQTIA  335 (348)
Q Consensus       305 ----~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~  335 (348)
                          ......|+++++ .||  |..+++|+|+++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~  286 (287)
T 2jl1_A          253 DAISKGEASKTSDDLQKLIG--SLTPLKETVKQALK  286 (287)
T ss_dssp             HHHHTTTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred             HHHhCCCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence                023556788988 799  55599999999875

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=9.9e-34  Score=247.12  Aligned_cols=214  Identities=17%  Similarity=0.111  Sum_probs=176.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |+||+||||||+||||++|+++|+++|++|++++|++.+..       ..+++++.+|++|.+++.++++++|+|||+||
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag   73 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-------GPNEECVQCDLADANAVNAMVAGCDGIVHLGG   73 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-------CTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence            34689999999999999999999999999999999875432       24789999999999999999999999999999


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      .....          +...++++|+.++.++++++++.+ .++|||+||..+++....    ..+++|+.+..       
T Consensus        74 ~~~~~----------~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~----~~~~~e~~~~~-------  131 (267)
T 3rft_A           74 ISVEK----------PFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQ----TERLGPDVPAR-------  131 (267)
T ss_dssp             CCSCC----------CHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBT----TSCBCTTSCCC-------
T ss_pred             CcCcC----------CHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCC----CCCCCCCCCCC-------
Confidence            74221          224889999999999999999888 889999999987754444    35788877654       


Q ss_pred             CCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCccee
Q 035965          169 KASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       169 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                        |.+.|+.||.++|.+++.++++++++++++||+.|||+....                             ...++|+
T Consensus       132 --~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~-----------------------------~~~~~~~  180 (267)
T 3rft_A          132 --PDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNNY-----------------------------RMLSTWF  180 (267)
T ss_dssp             --CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCST-----------------------------THHHHBC
T ss_pred             --CCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCCC-----------------------------CceeeEE
Confidence              678899999999999999998899999999999999873221                             1245599


Q ss_pred             eHHHHHHHHHHhhcCCCCCc-eE-EEeccCcChHHH
Q 035965          249 HIEDICNAHIFLMENDRAQG-QY-ICCVKSCPISEF  282 (348)
Q Consensus       249 ~v~D~a~~~~~~~~~~~~~~-~y-~~~~~~~s~~el  282 (348)
                      |++|+++++..+++.+..++ ++ ++++++.++.++
T Consensus       181 ~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  216 (267)
T 3rft_A          181 SHDDFVSLIEAVFRAPVLGCPVVWGASANDAGWWDN  216 (267)
T ss_dssp             CHHHHHHHHHHHHHCSCCCSCEEEECCCCTTCCBCC
T ss_pred             cHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCcccC
Confidence            99999999999999887654 44 556666665554

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=100.00  E-value=1.7e-34  Score=263.75  Aligned_cols=246  Identities=16%  Similarity=0.149  Sum_probs=190.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      |+|||||||||||++|+++|+++|+ +|++++|+                       .|++++.++++++|+|||+|+..
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-----------------------~d~~~l~~~~~~~d~Vih~a~~~   57 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-----------------------TKEEELESALLKADFIVHLAGVN   57 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-----------------------CCHHHHHHHHHHCSEEEECCCSB
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-----------------------CCHHHHHHHhccCCEEEECCcCC
Confidence            5899999999999999999999998 77766653                       56778888898999999999976


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcc-eEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK-RVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      ....         + ..+++.|+.++.+++++|++.+ ++ +|||+||.++++                           
T Consensus        58 ~~~~---------~-~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~---------------------------   99 (369)
T 3st7_A           58 RPEH---------D-KEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ---------------------------   99 (369)
T ss_dssp             CTTC---------S-TTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS---------------------------
T ss_pred             CCCC---------H-HHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC---------------------------
Confidence            5432         3 3788999999999999999988 55 999999988543                           


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHh-hhcCCCCccccccccccCCCCccee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLS-PITGDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                        .+.|+.+|.++|.+++.++++.+++++++||+++||++..+.....+..+.. ...+....+.      .+++.++|+
T Consensus       100 --~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i  171 (369)
T 3st7_A          100 --DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVN------DRNVELTLN  171 (369)
T ss_dssp             --CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCS------CTTCEEEEE
T ss_pred             --CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEec------CCCeEEEEE
Confidence              1469999999999999999988999999999999999877654445544443 4444443322      345789999


Q ss_pred             eHHHHHHHHHHhhcCCCC--CceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCCCCccccChHHHH-HcCCcccc
Q 035965          249 HIEDICNAHIFLMENDRA--QGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVPSVISSEKLK-DLGFNYKH  324 (348)
Q Consensus       249 ~v~D~a~~~~~~~~~~~~--~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~LG~~p~~  324 (348)
                      |++|+|++++.+++++..  ++.|+++ ++.+|+.|+++.+.+.+|. +.+......+    ......... .|||.|..
T Consensus       172 ~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~----~~~~~~l~~~~l~~~p~~  246 (369)
T 3st7_A          172 YVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQS-RLDRTLPKLD----NLFEKDLYSTYLSYLPST  246 (369)
T ss_dssp             EHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHH-HHHTCCCCTT----SHHHHHHHHHHHHTSCTT
T ss_pred             EHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCC-CcccccCCCC----CHHHHHHHHHHhcccCCc
Confidence            999999999999999877  6788876 4699999999999998875 2222211111    111123334 58999987


Q ss_pred             ChhHHHH
Q 035965          325 GIEDIIC  331 (348)
Q Consensus       325 ~~~e~l~  331 (348)
                      ++++.++
T Consensus       247 ~~~~~l~  253 (369)
T 3st7_A          247 DFSYPLL  253 (369)
T ss_dssp             CSCCCCC
T ss_pred             ceeechh
Confidence            7765543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=3.7e-34  Score=252.34  Aligned_cols=253  Identities=16%  Similarity=0.169  Sum_probs=186.9

Q ss_pred             eEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           13 TFCVTGANGYIGSWLVKTLLER--GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      +|||||||||||++|+++|+++  |++|++++|++.+. .+..     .+++++.+|++|++++.++++++|+|||+|+.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-----QGITVRQADYGDEAALTSALQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-----TTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-----CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            5899999999999999999998  99999999987654 2221     36889999999999999999999999999984


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      .             +     ..|+.++.+++++|++.+ +++|||+||.+++   ..                       
T Consensus        76 ~-------------~-----~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~---~~-----------------------  110 (286)
T 2zcu_A           76 E-------------V-----GQRAPQHRNVINAAKAAG-VKFIAYTSLLHAD---TS-----------------------  110 (286)
T ss_dssp             ------------------------CHHHHHHHHHHHHT-CCEEEEEEETTTT---TC-----------------------
T ss_pred             C-------------c-----hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC---CC-----------------------
Confidence            2             1     136778999999999988 8999999998743   11                       


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVH  249 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~  249 (348)
                       | ..|+.+|..+|.+++.    .+++++++||+.++++...     .   +.....+....++      .+++.++|+|
T Consensus       111 -~-~~y~~sK~~~e~~~~~----~~~~~~ilrp~~~~~~~~~-----~---~~~~~~~~~~~~~------~~~~~~~~i~  170 (286)
T 2zcu_A          111 -P-LGLADEHIETEKMLAD----SGIVYTLLRNGWYSENYLA-----S---APAALEHGVFIGA------AGDGKIASAT  170 (286)
T ss_dssp             -C-STTHHHHHHHHHHHHH----HCSEEEEEEECCBHHHHHT-----T---HHHHHHHTEEEES------CTTCCBCCBC
T ss_pred             -c-chhHHHHHHHHHHHHH----cCCCeEEEeChHHhhhhHH-----H---hHHhhcCCceecc------CCCCcccccc
Confidence             1 2599999999998865    4899999999877665321     1   1222222221111      2346789999


Q ss_pred             HHHHHHHHHHhhcCCCC-CceEEEecc-CcChHHHHHHHHHhCCCCCCCcccCC------------CCC-----------
Q 035965          250 IEDICNAHIFLMENDRA-QGQYICCVK-SCPISEFIDHLKLEYPSSKMQTFEGE------------NQS-----------  304 (348)
Q Consensus       250 v~D~a~~~~~~~~~~~~-~~~y~~~~~-~~s~~el~~~i~~~~~~~~~~~~~~~------------~~~-----------  304 (348)
                      ++|+|++++.+++++.. ++.|+++++ .+|+.|+++.+.+.+|. +.+....+            .+.           
T Consensus       171 ~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (286)
T 2zcu_A          171 RADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGK-QVTYQNLSEADFAAALKSVGLPDGLADMLADSDV  249 (286)
T ss_dssp             HHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSS-CCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCC-CCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            99999999999988644 567988655 99999999999999886 22211100            010           


Q ss_pred             ---CCccccChHHHH-HcCCccccChhHHHHHHHHHH
Q 035965          305 ---SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASC  337 (348)
Q Consensus       305 ---~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~  337 (348)
                         ......|+++++ .|||.|+ +++|+|+++++|+
T Consensus       250 ~~~~~~~~~~~~~~~~~lg~~~~-~~~e~l~~~~~~~  285 (286)
T 2zcu_A          250 GASKGGLFDDSKTLSKLIGHPTT-TLAESVSHLFNVN  285 (286)
T ss_dssp             HHHTTTTCCCCCHHHHHHTSCCC-CHHHHHHGGGC--
T ss_pred             HHhCCCCccCchHHHHHhCcCCC-CHHHHHHHHHhhc
Confidence               012456788888 7998666 9999999999987

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=4.2e-33  Score=238.78  Aligned_cols=216  Identities=18%  Similarity=0.230  Sum_probs=168.3

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCe-EEEEccCCCcchHHHhhcCCCEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRL-RLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      ..+++|+|||||||||||++|+++|+++|++|++++|++.+. .+..     .++ +++.+|++  +++.++++++|+||
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-----~~~~~~~~~Dl~--~~~~~~~~~~D~vi   89 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-----RGASDIVVANLE--EDFSHAFASIDAVV   89 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-----TTCSEEEECCTT--SCCGGGGTTCSEEE
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-----CCCceEEEcccH--HHHHHHHcCCCEEE
Confidence            345688999999999999999999999999999999987655 3222     268 99999999  67888889999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      |+|+......         + ...+++|+.++.++++++++.+ +++||++||.+....            +..+     
T Consensus        90 ~~ag~~~~~~---------~-~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~------------~~~~-----  141 (236)
T 3e8x_A           90 FAAGSGPHTG---------A-DKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDP------------DQGP-----  141 (236)
T ss_dssp             ECCCCCTTSC---------H-HHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCG------------GGSC-----
T ss_pred             ECCCCCCCCC---------c-cccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCC------------CCCh-----
Confidence            9999764322         3 4789999999999999999888 899999999543211            1111     


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCC
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS  244 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (348)
                           .+.+.|+.+|.++|.+++    +.+++++++||+.+||+......                  ....   .+.+.
T Consensus       142 -----~~~~~Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~~------------------~~~~---~~~~~  191 (236)
T 3e8x_A          142 -----MNMRHYLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGKV------------------TVSP---HFSEI  191 (236)
T ss_dssp             -----GGGHHHHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSEE------------------EEES---SCSCC
T ss_pred             -----hhhhhHHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCeE------------------Eecc---CCCcc
Confidence                 155789999999999876    46999999999999998643210                  0001   11235


Q ss_pred             cceeeHHHHHHHHHHhhcCCCC-CceEEEeccCcChHHHHHHHH
Q 035965          245 IALVHIEDICNAHIFLMENDRA-QGQYICCVKSCPISEFIDHLK  287 (348)
Q Consensus       245 r~~i~v~D~a~~~~~~~~~~~~-~~~y~~~~~~~s~~el~~~i~  287 (348)
                      ++++|++|+|++++.+++++.. ++.|+++++..++.|+++.++
T Consensus       192 ~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~~~~~~e~~~~i~  235 (236)
T 3e8x_A          192 TRSITRHDVAKVIAELVDQQHTIGKTFEVLNGDTPIAKVVEQLG  235 (236)
T ss_dssp             CCCEEHHHHHHHHHHHTTCGGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred             cCcEeHHHHHHHHHHHhcCccccCCeEEEeCCCcCHHHHHHHhc
Confidence            6799999999999999998754 557888766899999998765

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=2.7e-33  Score=237.15  Aligned_cols=209  Identities=18%  Similarity=0.234  Sum_probs=170.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCC-cchHHHhhcCCCEEEEccccC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQV-EGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      |+|||||||||||++++++|+++|++|++++|++.+....      ++++++.+|++| .+++.++++++|+|||+|+..
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~   74 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY------NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG   74 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC------TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc------CCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence            4899999999999999999999999999999987654111      479999999999 999999999999999999965


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA  170 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  170 (348)
                      .              ...+++|+.++.+++++|++.+ +++|||+||.+++..        .+.+| .+         ..
T Consensus        75 ~--------------~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~--------~~~~e-~~---------~~  121 (219)
T 3dqp_A           75 G--------------KSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQP--------EKWIG-AG---------FD  121 (219)
T ss_dssp             T--------------SSCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCG--------GGCCS-HH---------HH
T ss_pred             C--------------CCcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCC--------Ccccc-cc---------cc
Confidence            3              1567889999999999999988 889999999765432        13333 11         11


Q ss_pred             CcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeH
Q 035965          171 SGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI  250 (348)
Q Consensus       171 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v  250 (348)
                      |.+.|+.+|.++|.+++   +..+++++++||+.+||+.....                  +. .     +++.++++++
T Consensus       122 ~~~~Y~~sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~------------------~~-~-----~~~~~~~i~~  174 (219)
T 3dqp_A          122 ALKDYYIAKHFADLYLT---KETNLDYTIIQPGALTEEEATGL------------------ID-I-----NDEVSASNTI  174 (219)
T ss_dssp             HTHHHHHHHHHHHHHHH---HSCCCEEEEEEECSEECSCCCSE------------------EE-E-----SSSCCCCEEH
T ss_pred             cccHHHHHHHHHHHHHH---hccCCcEEEEeCceEecCCCCCc------------------cc-c-----CCCcCCcccH
Confidence            56789999999999987   45799999999999999865431                  00 0     1356779999


Q ss_pred             HHHHHHHHHhhcCCCC-CceEEEeccCcChHHHHHHH
Q 035965          251 EDICNAHIFLMENDRA-QGQYICCVKSCPISEFIDHL  286 (348)
Q Consensus       251 ~D~a~~~~~~~~~~~~-~~~y~~~~~~~s~~el~~~i  286 (348)
                      +|+|++++.+++++.. ++.|+++++..++.|+.+.-
T Consensus       175 ~Dva~~i~~~l~~~~~~g~~~~i~~g~~~~~e~~~~~  211 (219)
T 3dqp_A          175 GDVADTIKELVMTDHSIGKVISMHNGKTAIKEALESL  211 (219)
T ss_dssp             HHHHHHHHHHHTCGGGTTEEEEEEECSEEHHHHHHTT
T ss_pred             HHHHHHHHHHHhCccccCcEEEeCCCCccHHHHHHHH
Confidence            9999999999998765 55798877779999988753

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.98  E-value=1.7e-31  Score=226.86  Aligned_cols=213  Identities=15%  Similarity=0.081  Sum_probs=160.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      |||||||||||||++|+++|+++|++|++++|++.+. .+.     .++++++.+|++|.++  ++++++|+|||+|+..
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~   73 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-----GATVATLVKEPLVLTE--ADLDSVDAVVDALSVP   73 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-----CTTSEEEECCGGGCCH--HHHTTCSEEEECCCCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-----CCCceEEecccccccH--hhcccCCEEEECCccC
Confidence            4799999999999999999999999999999987654 221     1478999999999988  7788999999999976


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA  170 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  170 (348)
                      .            . ......|+.++.+++++|++.+  +++|++||+++++......  ..+.+|..+.         .
T Consensus        74 ~------------~-~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~--~~~~~~~~~~---------~  127 (224)
T 3h2s_A           74 W------------G-SGRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADH--PMILDFPESA---------A  127 (224)
T ss_dssp             T------------T-SSCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSS--CGGGGCCGGG---------G
T ss_pred             C------------C-cchhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCc--cccccCCCCC---------c
Confidence            1            1 1345679999999999999888  8999999987776554411  1233443321         1


Q ss_pred             CcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeH
Q 035965          171 SGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI  250 (348)
Q Consensus       171 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v  250 (348)
                      |.+.|+.+|..+|. +..+.++.+++++++||+.+||++....   .     .  .+. ..+.      .+.+.++++|+
T Consensus       128 ~~~~y~~sK~~~e~-~~~~~~~~~i~~~ivrp~~v~g~~~~~~---~-----~--~~~-~~~~------~~~~~~~~i~~  189 (224)
T 3h2s_A          128 SQPWYDGALYQYYE-YQFLQMNANVNWIGISPSEAFPSGPATS---Y-----V--AGK-DTLL------VGEDGQSHITT  189 (224)
T ss_dssp             GSTTHHHHHHHHHH-HHHHTTCTTSCEEEEEECSBCCCCCCCC---E-----E--EES-SBCC------CCTTSCCBCCH
T ss_pred             cchhhHHHHHHHHH-HHHHHhcCCCcEEEEcCccccCCCcccC---c-----e--ecc-cccc------cCCCCCceEeH
Confidence            46789999999994 4556666799999999999999954321   0     0  011 1111      11245679999


Q ss_pred             HHHHHHHHHhhcCCCC-CceEEEecc
Q 035965          251 EDICNAHIFLMENDRA-QGQYICCVK  275 (348)
Q Consensus       251 ~D~a~~~~~~~~~~~~-~~~y~~~~~  275 (348)
                      +|+|++++.+++++.. ++.|++++.
T Consensus       190 ~DvA~~~~~~l~~~~~~g~~~~~~~~  215 (224)
T 3h2s_A          190 GNMALAILDQLEHPTAIRDRIVVRDA  215 (224)
T ss_dssp             HHHHHHHHHHHHSCCCTTSEEEEEEC
T ss_pred             HHHHHHHHHHhcCccccCCEEEEecC
Confidence            9999999999999876 557877653

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.98  E-value=1.9e-31  Score=235.44  Aligned_cols=253  Identities=17%  Similarity=0.178  Sum_probs=180.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      |+|||||||||||++++++|++. |++|++++|++.+. .+.     ..+++++.+|++|++++.++++++|+|||+|+.
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-----~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   75 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-----RGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI   75 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-----BTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-----hCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            47999999999999999999998 99999999987655 222     147999999999999999999999999999985


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      ...                ...|+.++.+++++|++.+ +++|||+||.+.   ...                       
T Consensus        76 ~~~----------------~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~---~~~-----------------------  112 (289)
T 3e48_A           76 IHP----------------SFKRIPEVENLVYAAKQSG-VAHIIFIGYYAD---QHN-----------------------  112 (289)
T ss_dssp             CCS----------------HHHHHHHHHHHHHHHHHTT-CCEEEEEEESCC---STT-----------------------
T ss_pred             Ccc----------------chhhHHHHHHHHHHHHHcC-CCEEEEEcccCC---CCC-----------------------
Confidence            421                1237899999999999998 999999999431   111                       


Q ss_pred             CCcchhHhhH--HHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcce
Q 035965          170 ASGWVYVLSK--LLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIAL  247 (348)
Q Consensus       170 ~~~~~Y~~sK--~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  247 (348)
                         .+|..++  ..+|..+    ++.+++++++||+.+||+..        ..+.....+....++      .+++.++|
T Consensus       113 ---~~~~~~~~~~~~e~~~----~~~g~~~~ilrp~~~~~~~~--------~~~~~~~~~~~~~~~------~g~~~~~~  171 (289)
T 3e48_A          113 ---NPFHMSPYFGYASRLL----STSGIDYTYVRMAMYMDPLK--------PYLPELMNMHKLIYP------AGDGRINY  171 (289)
T ss_dssp             ---CCSTTHHHHHHHHHHH----HHHCCEEEEEEECEESTTHH--------HHHHHHHHHTEECCC------CTTCEEEE
T ss_pred             ---CCCccchhHHHHHHHH----HHcCCCEEEEeccccccccH--------HHHHHHHHCCCEecC------CCCceeee
Confidence               0122222  2334433    34589999999999999732        122222222222222      23477899


Q ss_pred             eeHHHHHHHHHHhhcCCCC-CceEEEeccCcChHHHHHHHHHhCCCCCCCccc----------CC-C--CC---------
Q 035965          248 VHIEDICNAHIFLMENDRA-QGQYICCVKSCPISEFIDHLKLEYPSSKMQTFE----------GE-N--QS---------  304 (348)
Q Consensus       248 i~v~D~a~~~~~~~~~~~~-~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~----------~~-~--~~---------  304 (348)
                      +|++|+|++++.++.++.. ++.|+++++.+|+.|+++.+.+.+|. +++...          .. .  ..         
T Consensus       172 i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  250 (289)
T 3e48_A          172 ITRNDIARGVIAIIKNPDTWGKRYLLSGYSYDMKELAAILSEASGT-EIKYEPVSLETFAEMYDEPKGFGALLASMYHAG  250 (289)
T ss_dssp             ECHHHHHHHHHHHHHCGGGTTCEEEECCEEEEHHHHHHHHHHHHTS-CCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHH
T ss_pred             EEHHHHHHHHHHHHcCCCcCCceEEeCCCcCCHHHHHHHHHHHHCC-ceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHH
Confidence            9999999999999998765 66888777799999999999999986 322111          00 0  00         


Q ss_pred             -CCccccChHHHH-HcCCccccChhHHHHHHHH
Q 035965          305 -SVPSVISSEKLK-DLGFNYKHGIEDIICQTIA  335 (348)
Q Consensus       305 -~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~  335 (348)
                       ......++..++ .||+.|+ +++|.+++...
T Consensus       251 ~~g~~~~~~~~~~~~~G~~p~-~~~~~~~~~~~  282 (289)
T 3e48_A          251 ARGLLDQESNDFKQLVNDQPQ-TLQSFLQENIL  282 (289)
T ss_dssp             HTTTTCCCCSHHHHHHSSCCC-CHHHHHHC---
T ss_pred             HCCCccccCchHHHHhCCCCC-CHHHHHHHHHH
Confidence             112223444455 8999999 99887765443

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.98  E-value=1.7e-31  Score=241.68  Aligned_cols=275  Identities=13%  Similarity=0.084  Sum_probs=189.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccc-cCCCCCeEEEEccCCCcchHHHhhc--CCCE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM--GCDG   82 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~   82 (348)
                      .|++|+|||||||||||++|+++|++.|++|++++|++...  ..... .....+++++.+|+.|.+++.++++  ++|+
T Consensus         7 ~M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~   86 (346)
T 3i6i_A            7 PSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDI   86 (346)
T ss_dssp             ----CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCE
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCE
Confidence            35567999999999999999999999999999999976321  11100 0012479999999999999999999  9999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI  162 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~  162 (348)
                      |||+|+..                     |+.++.+++++|++.+.+++||+ |+   ++         ...+|.++.. 
T Consensus        87 Vi~~a~~~---------------------n~~~~~~l~~aa~~~g~v~~~v~-S~---~g---------~~~~e~~~~~-  131 (346)
T 3i6i_A           87 VVSTVGGE---------------------SILDQIALVKAMKAVGTIKRFLP-SE---FG---------HDVNRADPVE-  131 (346)
T ss_dssp             EEECCCGG---------------------GGGGHHHHHHHHHHHCCCSEEEC-SC---CS---------SCTTTCCCCT-
T ss_pred             EEECCchh---------------------hHHHHHHHHHHHHHcCCceEEee-cc---cC---------CCCCccCcCC-
Confidence            99999842                     56668899999998876788886 43   22         1334444322 


Q ss_pred             chhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCC
Q 035965          163 HHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRM  242 (348)
Q Consensus       163 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (348)
                              |.+.|+.+|..+|.+++.    .+++++++||++++|......    .........+  ..+...+   .++
T Consensus       132 --------p~~~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~----~~~~~~~~~~--~~~~~~g---~g~  190 (346)
T 3i6i_A          132 --------PGLNMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYYNN----IHPSEVLPPT--DFFQIYG---DGN  190 (346)
T ss_dssp             --------THHHHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC---------CCCCS--SCEEEET---TSC
T ss_pred             --------CcchHHHHHHHHHHHHHH----cCCCEEEEEecccccccCccc----cccccccCCC--ceEEEcc---CCC
Confidence                    667899999999998876    589999999999999764332    1111111112  2233233   344


Q ss_pred             CCcceeeHHHHHHHHHHhhcCCCC-CceEEEe--ccCcChHHHHHHHHHhCCCCCCCcccCC------------CCC---
Q 035965          243 GSIALVHIEDICNAHIFLMENDRA-QGQYICC--VKSCPISEFIDHLKLEYPSSKMQTFEGE------------NQS---  304 (348)
Q Consensus       243 ~~r~~i~v~D~a~~~~~~~~~~~~-~~~y~~~--~~~~s~~el~~~i~~~~~~~~~~~~~~~------------~~~---  304 (348)
                      +.++|+|++|+|++++.++.++.. ++.|++.  ++.+|+.|+++.+.+.+|. +++....+            .+.   
T Consensus       191 ~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~p~~~~  269 (346)
T 3i6i_A          191 VKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGR-TLPRVTVTEDDLLAAAGENIIPQSVV  269 (346)
T ss_dssp             CCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTS-CCCEEEECHHHHHHHHHTCCTTHHHH
T ss_pred             ceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCC-CCceEecCHHHHHHHHhcCCChhhhH
Confidence            789999999999999999998765 5567664  5799999999999999986 33321100            000   


Q ss_pred             ----------CCccccCh-----HHHH-H-cCCccccChhHHHHHHHHHHHHc
Q 035965          305 ----------SVPSVISS-----EKLK-D-LGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       305 ----------~~~~~~~~-----~~~~-~-LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                                .....++.     ..++ . -+++|+ +++|.++++++|+.++
T Consensus       270 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~t-~~~e~l~~~~~~~~~~  321 (346)
T 3i6i_A          270 AAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSFR-TVEECFGEYIVKMEEK  321 (346)
T ss_dssp             HHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCCC-CHHHHHHHHHCC----
T ss_pred             HHHHHHHhccCCCcccccCCCCcccHHHhCCCCCcC-cHHHHHHHHHHHhhcc
Confidence                      00011111     1233 2 367787 9999999999998764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.97  E-value=2.7e-31  Score=225.06  Aligned_cols=215  Identities=15%  Similarity=0.173  Sum_probs=145.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      |||||||||||||++|+++|+++|++|++++|++.+. .+.      ++++++.+|++|.++  +++.++|+|||+|+..
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~   72 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH------KDINILQKDIFDLTL--SDLSDQNVVVDAYGIS   72 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC------SSSEEEECCGGGCCH--HHHTTCSEEEECCCSS
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc------CCCeEEeccccChhh--hhhcCCCEEEECCcCC
Confidence            5799999999999999999999999999999987654 221      478999999999987  7788999999999963


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA  170 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  170 (348)
                      .               .....|+.++.++++++++.+ .+++|++||..++++...    ..+..|+.+..         
T Consensus        73 ~---------------~~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~----~~~~~~~~~~~---------  123 (221)
T 3ew7_A           73 P---------------DEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDED----GNTLLESKGLR---------  123 (221)
T ss_dssp             T---------------TTTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-------------------------------
T ss_pred             c---------------cccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCC----CccccccCCCC---------
Confidence            1               234568999999999999987 899999999987776554    22444444322         


Q ss_pred             CcchhHhhHHHHHHHHHHHHH-hCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceee
Q 035965          171 SGWVYVLSKLLSEETAFKFAN-ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVH  249 (348)
Q Consensus       171 ~~~~Y~~sK~~~E~~~~~~~~-~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~  249 (348)
                      |.+.|+.+|..+|.+ ..+.+ ..+++++++||+.+||++....  .+      ...+....+.  +.      ..+++|
T Consensus       124 ~~~~y~~~k~~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~--~~------~~~~~~~~~~--~~------~~~~i~  186 (221)
T 3ew7_A          124 EAPYYPTARAQAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTG--DY------QIGKDHLLFG--SD------GNSFIS  186 (221)
T ss_dssp             -CCCSCCHHHHHHHH-HHHHTTTTTSCEEEEECSSCCCCC-------------------------------------CCC
T ss_pred             CHHHHHHHHHHHHHH-HHHHhhccCccEEEEeCcceecCCCccC--ce------Eeccccceec--CC------CCceEe
Confidence            556799999999986 33333 6799999999999999943221  10      0111111111  11      124999


Q ss_pred             HHHHHHHHHHhhcCCCC-CceEEEecc-CcChH
Q 035965          250 IEDICNAHIFLMENDRA-QGQYICCVK-SCPIS  280 (348)
Q Consensus       250 v~D~a~~~~~~~~~~~~-~~~y~~~~~-~~s~~  280 (348)
                      ++|+|++++.+++++.. ++.|++++. ..+..
T Consensus       187 ~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~  219 (221)
T 3ew7_A          187 MEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHH  219 (221)
T ss_dssp             HHHHHHHHHHHHHSCSCTTSEEECCC-------
T ss_pred             HHHHHHHHHHHHhCccccCCEEEECCCCccccc
Confidence            99999999999999876 557887654 54443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.97  E-value=6.6e-31  Score=227.17  Aligned_cols=234  Identities=16%  Similarity=0.118  Sum_probs=172.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      +++|+||||||+||||++|+++|+++  |++|++++|++.+. .+      ..+++++.+|++|.+++.++++++|+|||
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~~~d~vi~   75 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------GGEADVFIGDITDADSINPAFQGIDALVI   75 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------TCCTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc------CCCeeEEEecCCCHHHHHHHHcCCCEEEE
Confidence            45789999999999999999999999  89999999976543 22      24678999999999999999999999999


Q ss_pred             ccccCcccc------cc---ccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           86 VAASMEFDI------NV---KDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        86 ~a~~~~~~~------~~---~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      +|+......      ..   ....+++  ...+++|+.++.++++++++.+ .++|||+||.+++..  .     .+...
T Consensus        76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~--~-----~~~~~  145 (253)
T 1xq6_A           76 LTSAVPKMKPGFDPTKGGRPEFIFEDG--QYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNP--D-----HPLNK  145 (253)
T ss_dssp             CCCCCCEECTTCCTTSSCCCCEECCTT--CSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCT--T-----CGGGG
T ss_pred             eccccccccccccccccccchhhcccc--ccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCCC--C-----Ccccc
Confidence            999754211      00   1111111  2467899999999999999888 889999999864210  0     01100


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                      .             ..+.|+.+|..+|.+++.    .+++++++||+.+||+..... .        ...+....+.  +
T Consensus       146 ~-------------~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~-~--------~~~~~~~~~~--~  197 (253)
T 1xq6_A          146 L-------------GNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVR-E--------LLVGKDDELL--Q  197 (253)
T ss_dssp             G-------------GGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSS-C--------EEEESTTGGG--G
T ss_pred             c-------------cchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchh-h--------hhccCCcCCc--C
Confidence            0             113488899999998764    689999999999999974321 0        1111111111  1


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCCC-CceEEEecc----CcChHHHHHHHHHhCCC
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDRA-QGQYICCVK----SCPISEFIDHLKLEYPS  292 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~-~~~y~~~~~----~~s~~el~~~i~~~~~~  292 (348)
                            ..++++|++|+|++++.+++++.. ++.|+++++    ++|+.|+++.+.+.+|+
T Consensus       198 ------~~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          198 ------TDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             ------SSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             ------CCCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence                  124599999999999999998754 557877543    58999999999998875

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.97  E-value=9.2e-31  Score=232.16  Aligned_cols=268  Identities=16%  Similarity=0.082  Sum_probs=189.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      +|+|||||||||||++++++|+++| ++|++++|++.+.....+.  ..+++++.+|++|++++.++++++|+|||+++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~--~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   82 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR--LQGAEVVQGDQDDQVIMELALNGAYATFIVTNY   82 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCSEEEECCCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH--HCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCC
Confidence            5789999999999999999999999 9999999987643111110  136899999999999999999999999999974


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      ...              ...+.|+.++.+++++|++.+ +++|||+||..++. ...          ..           
T Consensus        83 ~~~--------------~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~-~~~----------~~-----------  125 (299)
T 2wm3_A           83 WES--------------CSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKK-LTA----------GR-----------  125 (299)
T ss_dssp             HHH--------------TCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHH-HTT----------TS-----------
T ss_pred             Ccc--------------ccchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccc-cCC----------Cc-----------
Confidence            211              123467889999999999988 89999987765432 211          11           


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVH  249 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~  249 (348)
                       +...|+.+|..+|.+++.    .+++++++||+.+||+......+.      ....+....+. ..   .+++.++|+|
T Consensus       126 -~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~------~~~~g~~~~~~-~~---~~~~~~~~i~  190 (299)
T 2wm3_A          126 -LAAAHFDGKGEVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQ------KAPDGKSYLLS-LP---TGDVPMDGMS  190 (299)
T ss_dssp             -CCCHHHHHHHHHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCE------ECTTSSSEEEC-CC---CTTSCEEEEC
T ss_pred             -ccCchhhHHHHHHHHHHH----CCCCEEEEeecHHhhhchhhcCCc------ccCCCCEEEEE-ec---CCCCccceec
Confidence             235699999999999876    389999999999999753311110      01112111111 11   2346788999


Q ss_pred             HHHHHHHHHHhhcCCC--CCceEEEeccCcChHHHHHHHHHhCCCCCCCcccC--------CCCC-----------CCcc
Q 035965          250 IEDICNAHIFLMENDR--AQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEG--------ENQS-----------SVPS  308 (348)
Q Consensus       250 v~D~a~~~~~~~~~~~--~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~~~--------~~~~-----------~~~~  308 (348)
                      ++|+|+++..++.++.  .++.|+++++.+|+.|+++.+.+.+|. +++....        ..+.           ....
T Consensus       191 ~~Dva~~~~~~l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  269 (299)
T 2wm3_A          191 VSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRK-VVHDAKMTPEDYEKLGFPGARDLANMFRFYALRP  269 (299)
T ss_dssp             GGGHHHHHHHHHHSHHHHTTCEEECCSEEECHHHHHHHHHHHHSS-CEEECCCCTHHHHTTCSTTHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHcChhhhCCeEEEeeeccCCHHHHHHHHHHHHCC-CceeEecCHHHHHhcCCCcHHHHHHHHHHHHhcC
Confidence            9999999999998752  456788877899999999999999886 2221100        0000           0111


Q ss_pred             ccChHHHHHcCCccccChhHHHHHHH
Q 035965          309 VISSEKLKDLGFNYKHGIEDIICQTI  334 (348)
Q Consensus       309 ~~~~~~~~~LG~~p~~~~~e~l~~~~  334 (348)
                      ..+.+..+.+|..|+ +++|.+++..
T Consensus       270 ~~~~~~~~~~g~~~~-~~~~~~~~~~  294 (299)
T 2wm3_A          270 DRDIELTLRLNPKAL-TLDQWLEQHK  294 (299)
T ss_dssp             CCCHHHHHHHCTTCC-CHHHHHHHHG
T ss_pred             CCCHHHHHHhCCCCC-CHHHHHHhCh
Confidence            122333347888888 8888887653

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=1.3e-30  Score=219.86  Aligned_cols=200  Identities=16%  Similarity=0.071  Sum_probs=156.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |+|+|+|||||||||++++++|+++|+  +|++++|++.+        ..++++++.+|++|.+++.+++  +|+|||+|
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~--------~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a   73 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EHPRLDNPVGPLAELLPQLDGS--IDTAFCCL   73 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CCTTEECCBSCHHHHGGGCCSC--CSEEEECC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc--------cCCCceEEeccccCHHHHHHhh--hcEEEECe
Confidence            467999999999999999999999998  99999998753        1247888999999998888777  99999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      +......  .+     + ..++++|+.++.++++++++.+ .++|||+||..++.   .                     
T Consensus        74 ~~~~~~~--~~-----~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~---~---------------------  120 (215)
T 2a35_A           74 GTTIKEA--GS-----E-EAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADA---K---------------------  120 (215)
T ss_dssp             CCCHHHH--SS-----H-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT---T---------------------
T ss_pred             eeccccC--CC-----H-HHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCC---C---------------------
Confidence            9754321  12     2 4788999999999999999988 88999999987542   1                     


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCc-EEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcc
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKID-LVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIA  246 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~-~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  246 (348)
                         +.+.|+.+|.++|.+++.    .+++ ++++||+.+||+.....   +.    ..+.+....+. .       ..++
T Consensus       121 ---~~~~y~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~---~~----~~~~~~~~~~~-~-------~~~~  178 (215)
T 2a35_A          121 ---SSIFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFR---LA----EILAAPIARIL-P-------GKYH  178 (215)
T ss_dssp             ---CSSHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEE---GG----GGTTCCCC------------CHHH
T ss_pred             ---CccHHHHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcch---HH----HHHHHhhhhcc-C-------CCcC
Confidence               335799999999998876    4899 99999999999976521   11    11111111111 1       2567


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 035965          247 LVHIEDICNAHIFLMENDRAQGQYICCVK  275 (348)
Q Consensus       247 ~i~v~D~a~~~~~~~~~~~~~~~y~~~~~  275 (348)
                      ++|++|+|++++.+++++. ++.|+++++
T Consensus       179 ~i~~~Dva~~~~~~~~~~~-~~~~~i~~~  206 (215)
T 2a35_A          179 GIEACDLARALWRLALEEG-KGVRFVESD  206 (215)
T ss_dssp             HHHHHHHHHHHHHHHTCCC-SEEEEEEHH
T ss_pred             cEeHHHHHHHHHHHHhcCC-CCceEEcHH
Confidence            9999999999999999875 778887653

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.96  E-value=4.4e-29  Score=214.44  Aligned_cols=209  Identities=17%  Similarity=0.083  Sum_probs=159.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      |++|+|+||||+||||++++++|+++|+  +|++++|++.+......    +++.++.+|++|.+++.++++++|+|||+
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~----~~~~~~~~D~~d~~~~~~~~~~~d~vi~~   91 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY----KNVNQEVVDFEKLDDYASAFQGHDVGFCC   91 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG----GGCEEEECCGGGGGGGGGGGSSCSEEEEC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc----CCceEEecCcCCHHHHHHHhcCCCEEEEC
Confidence            3467999999999999999999999999  99999998764411111    36889999999999999999999999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      |+......         ....++++|+.++.++++++++.+ .++||++||.+++.   .                    
T Consensus        92 ag~~~~~~---------~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~---~--------------------  138 (242)
T 2bka_A           92 LGTTRGKA---------GAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADK---S--------------------  138 (242)
T ss_dssp             CCCCHHHH---------HHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT---T--------------------
T ss_pred             CCcccccC---------CcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCC---C--------------------
Confidence            99654322         224788999999999999999888 88999999987542   1                    


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHhCCC-cEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANENKI-DLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~-~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                          +.+.|+.+|.++|.+++.    .++ +++++||+.+||+.....   ....+.....+... .. .+..       
T Consensus       139 ----~~~~Y~~sK~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~~---~~~~~~~~~~~~~~-~~-~~~~-------  198 (242)
T 2bka_A          139 ----SNFLYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESR---PGEWLVRKFFGSLP-DS-WASG-------  198 (242)
T ss_dssp             ----CSSHHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGS---HHHHHHHHHHCSCC-TT-GGGG-------
T ss_pred             ----CcchHHHHHHHHHHHHHh----cCCCCeEEEcCceecCCCCCCc---HHHHHHHHhhcccC-cc-ccCC-------
Confidence                224699999999998866    467 599999999999975321   12222222222111 11 1222       


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEec
Q 035965          246 ALVHIEDICNAHIFLMENDRAQGQYICCV  274 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~~~~y~~~~  274 (348)
                      .+++++|+|++++.++.++...+.|++++
T Consensus       199 ~~~~~~dva~~~~~~~~~~~~~~~~~~~~  227 (242)
T 2bka_A          199 HSVPVVTVVRAMLNNVVRPRDKQMELLEN  227 (242)
T ss_dssp             TEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred             cccCHHHHHHHHHHHHhCccccCeeEeeH
Confidence            29999999999999999887777777654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.96  E-value=4.4e-29  Score=225.97  Aligned_cols=227  Identities=14%  Similarity=0.070  Sum_probs=167.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEcc-CCCcchHHHhhcCCCEEEEcccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQAD-LQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D-l~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      +|+|+|||||||||++|+++|+++|++|++++|++.+.....+. ..++++++.+| ++|++++.++++++|+|||+++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~-~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~   83 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-AIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   83 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH-TSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh-hcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence            57899999999999999999999999999999987643101111 11368999999 99999999999999999999874


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecccee-eeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVST-ITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~-~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      ..                 ...|..+ .+++++|++.+.+++|||+||.+. .+   .         +            
T Consensus        84 ~~-----------------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~---~---------~------------  121 (352)
T 1xgk_A           84 QA-----------------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLY---G---------P------------  121 (352)
T ss_dssp             TT-----------------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGT---S---------S------------
T ss_pred             CC-----------------cHHHHHH-HHHHHHHHHcCCccEEEEeCCcccccc---C---------C------------
Confidence            21                 1235666 899999988764689999999752 11   0         0            


Q ss_pred             CCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhh-hcCCCCccccccccccCCCCcce
Q 035965          169 KASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSP-ITGDSKFFSILSSVSNRMGSIAL  247 (348)
Q Consensus       169 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~  247 (348)
                       .+.+.|+.+|..+|.+++.    .+++++++||+ +||++........   +... .......+...+   .+++.+++
T Consensus       122 -~~~~~y~~sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~~~~~---~~~~~~~~g~~~~~~~~---~~~~~~~~  189 (352)
T 1xgk_A          122 -WPAVPMWAPKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSLPYPL---FQMELMPDGTFEWHAPF---DPDIPLPW  189 (352)
T ss_dssp             -CCCCTTTHHHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSSSCSS---CBEEECTTSCEEEEESS---CTTSCEEE
T ss_pred             -CCCccHHHHHHHHHHHHHH----cCCCEEEEecc-eecCCchhccccc---ccccccCCCceEEeecc---CCCCceee
Confidence             0235699999999999876    48999999976 7898654321111   1111 111111111111   23478899


Q ss_pred             eeH-HHHHHHHHHhhcCCC---CCceEEEeccCcChHHHHHHHHHhCCC
Q 035965          248 VHI-EDICNAHIFLMENDR---AQGQYICCVKSCPISEFIDHLKLEYPS  292 (348)
Q Consensus       248 i~v-~D~a~~~~~~~~~~~---~~~~y~~~~~~~s~~el~~~i~~~~~~  292 (348)
                      +|+ +|+|++++.+++++.   .++.|+++++.+|+.|+++.+.+.+|.
T Consensus       190 i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G~  238 (352)
T 1xgk_A          190 LDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR  238 (352)
T ss_dssp             ECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred             EecHHHHHHHHHHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHCC
Confidence            999 899999999998752   467899888899999999999999886

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.96  E-value=1.1e-27  Score=200.34  Aligned_cols=201  Identities=15%  Similarity=0.136  Sum_probs=151.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      +|+|+|||||||||++++++|+++|++|++++|++.+....    ...+++++.+|++|.+++.++++++|+|||+|+..
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~   78 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE----GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR   78 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS----SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc----cCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence            37899999999999999999999999999999987643111    12478999999999999999999999999999865


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCC
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKA  170 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  170 (348)
                      ...             ...+.|+.++.++++++++.+ +++||++||.++++....     .+.                
T Consensus        79 ~~~-------------~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~-----~~~----------------  123 (206)
T 1hdo_A           79 NDL-------------SPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTK-----VPP----------------  123 (206)
T ss_dssp             TCC-------------SCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTC-----SCG----------------
T ss_pred             CCC-------------CccchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCccc-----ccc----------------
Confidence            431             112478999999999999888 889999999875532221     000                


Q ss_pred             CcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeH
Q 035965          171 SGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI  250 (348)
Q Consensus       171 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v  250 (348)
                      +.+.|+.+|..+|.+++.    .+++++++||+.+ +++....  ...    ....         +. .    .++++|+
T Consensus       124 ~~~~y~~~K~~~e~~~~~----~~i~~~~lrp~~~-~~~~~~~--~~~----~~~~---------~~-~----~~~~i~~  178 (206)
T 1hdo_A          124 RLQAVTDDHIRMHKVLRE----SGLKYVAVMPPHI-GDQPLTG--AYT----VTLD---------GR-G----PSRVISK  178 (206)
T ss_dssp             GGHHHHHHHHHHHHHHHH----TCSEEEEECCSEE-ECCCCCS--CCE----EESS---------SC-S----SCSEEEH
T ss_pred             cchhHHHHHHHHHHHHHh----CCCCEEEEeCCcc-cCCCCCc--ceE----eccc---------CC-C----CCCccCH
Confidence            345799999999998853    6899999999997 4332211  000    0000         00 0    0359999


Q ss_pred             HHHHHHHHHhhcCCCC-CceEEEecc
Q 035965          251 EDICNAHIFLMENDRA-QGQYICCVK  275 (348)
Q Consensus       251 ~D~a~~~~~~~~~~~~-~~~y~~~~~  275 (348)
                      +|+|++++.+++++.. ++.|+++++
T Consensus       179 ~Dva~~~~~~~~~~~~~g~~~~i~~g  204 (206)
T 1hdo_A          179 HDLGHFMLRCLTTDEYDGHSTYPSHQ  204 (206)
T ss_dssp             HHHHHHHHHTTSCSTTTTCEEEEECC
T ss_pred             HHHHHHHHHHhcCccccccceeeecc
Confidence            9999999999998765 456877653

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.96  E-value=7.8e-29  Score=217.75  Aligned_cols=241  Identities=15%  Similarity=0.104  Sum_probs=171.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|+||||||+|+||++++++|+++|++|++++|+..+. .....  ...++.++.+|++|.+++.++++       ++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA--YPDRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH--CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--ccCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            4578999999999999999999999999999999987654 22221  12478999999999998887775       78


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHH----HHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQS----TLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||..........+.++|  ...+++|+.+    ++.+++.+++.+ .++||++||...+.+.            
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------------  145 (281)
T 3m1a_A           81 DVLVNNAGRTQVGAFEETTEREL--RDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSF------------  145 (281)
T ss_dssp             SEEEECCCCEEECCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC------------
T ss_pred             CEEEECCCcCCCCChhhCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCCC------------
Confidence            99999999765443333333334  4789999999    455555555555 6899999998754321            


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCC-------CchHHHHHhhhc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSV-------PSSIQVLLSPIT  226 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~-------~~~~~~~~~~~~  226 (348)
                                   ++.+.|+.||.+.|.+++.++.+   ++++++++|||.|+++......       +........   
T Consensus       146 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---  209 (281)
T 3m1a_A          146 -------------AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGP---  209 (281)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHH---
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHH---
Confidence                         14468999999999999999887   7899999999999887543221       111110000   


Q ss_pred             CCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEecc-CcChHHHHHHHHHhC
Q 035965          227 GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVK-SCPISEFIDHLKLEY  290 (348)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~-~~s~~el~~~i~~~~  290 (348)
                      ..  .+.   .   ....+.+++++|+|++++.+++++..++.|+++++ ...+.+....+.+.+
T Consensus       210 ~~--~~~---~---~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~  266 (281)
T 3m1a_A          210 TR--QLV---Q---GSDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAEL  266 (281)
T ss_dssp             HH--HHH---H---C-----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHH
T ss_pred             HH--HHH---h---hccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHH
Confidence            00  000   0   01234488999999999999999888888877654 666677776666654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.96  E-value=3.1e-28  Score=213.57  Aligned_cols=245  Identities=17%  Similarity=0.159  Sum_probs=174.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|+||||||+|+||++++++|+++|++|++++|+..+. ..........++.++.+|++|.+++.++++       +
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   92 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   92 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999976433 221111112368999999999999888775       7


Q ss_pred             CCEEEEccccCccc--cccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           80 CDGVFHVAASMEFD--INVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        80 ~d~Vih~a~~~~~~--~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +|+|||+||.....  .....+.++|  ...+++|+.++.++++++...   ...++||++||..++.+.+.        
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------  162 (278)
T 2bgk_A           93 LDIMFGNVGVLSTTPYSILEAGNEDF--KRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG--------  162 (278)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT--------
T ss_pred             CCEEEECCcccCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC--------
Confidence            99999999975431  1112222333  478999999999999988763   12579999999876543221        


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      +...|+.+|.+.|.+++.++.+   .+++++++||+.++|+....................+  
T Consensus       163 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--  224 (278)
T 2bgk_A          163 ----------------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA--  224 (278)
T ss_dssp             ----------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC--
T ss_pred             ----------------CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc--
Confidence                            3357999999999999998876   5899999999999999754321111111111111100  


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--C-CceEEEec-cCcChHHHHHHHHHhC
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--A-QGQYICCV-KSCPISEFIDHLKLEY  290 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~-~~~s~~el~~~i~~~~  290 (348)
                                ...+.+++++|+|+++++++....  . +..|++.+ ...++.|+++.+.+.+
T Consensus       225 ----------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          225 ----------NLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             ----------SSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             ----------ccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence                      012348899999999999987542  2 44577754 5899999999887653

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=6.4e-28  Score=208.75  Aligned_cols=233  Identities=14%  Similarity=0.066  Sum_probs=158.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc----CCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM----GCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~Vih~   86 (348)
                      ||+||||||+||||++++++|+++|++|++++|++.+...           .+.+|++|.+++.++++    ++|+|||+
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~   69 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-----------DLSTPGGRETAVAAVLDRCGGVLDGLVCC   69 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------CTTSHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-----------cccCCcccHHHHHHHHHHcCCCccEEEEC
Confidence            4689999999999999999999999999999998754210           15689999988888876    79999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCCCC-CCc
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ-TPI  162 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~-~~~  162 (348)
                      |+......         +....+++|+.++.++++++.+.   ...++||++||..+++....    ..+..|... .+.
T Consensus        70 Ag~~~~~~---------~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~~~~~~~~  136 (255)
T 2dkn_A           70 AGVGVTAA---------NSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAA----ELPMVEAMLAGDE  136 (255)
T ss_dssp             CCCCTTSS---------CHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGG----GCHHHHHHHHTCH
T ss_pred             CCCCCcch---------hHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccccc----ccchhhhhcccch
Confidence            99764221         22488999999999999987754   12589999999987654322    112211100 000


Q ss_pred             chh----hccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccc
Q 035965          163 HHV----WNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       163 ~~~----~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                      ...    .....+.+.|+.+|.+.|.+++.++++   .+++++++||+.++|+....       .+.....+  ....  
T Consensus       137 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~-------~~~~~~~~--~~~~--  205 (255)
T 2dkn_A          137 ARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQA-------SKADPRYG--ESTR--  205 (255)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHH-------HHHCTTTH--HHHH--
T ss_pred             hhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhh-------cccchhhH--HHHH--
Confidence            000    000125568999999999999998876   68999999999999974211       00000000  0000  


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCC--CC-CceEEEecc-CcChHH
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMEND--RA-QGQYICCVK-SCPISE  281 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~-~~~y~~~~~-~~s~~e  281 (348)
                       .. .+ ..+++++++|+|++++.+++.+  .. +..|++++. .+++.|
T Consensus       206 -~~-~~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          206 -RF-VA-PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             -SC-CC-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             -HH-HH-HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence             00 01 2456999999999999999876  23 446777654 555443

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.95  E-value=2.1e-27  Score=205.58  Aligned_cols=234  Identities=14%  Similarity=0.069  Sum_probs=167.6

Q ss_pred             CCCCCcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc
Q 035965            1 MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus         1 m~~~~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      |.....+.+++|+||||||+|+||++++++|+++|++|++++|+..+. ... .+.....++.++.+|++|++++.++++
T Consensus         1 m~~~~~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   80 (255)
T 1fmc_A            1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_dssp             CCCGGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCccCCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence            555566667789999999999999999999999999999999986543 111 111123468899999999998888775


Q ss_pred             -------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCC
Q 035965           79 -------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSS  147 (348)
Q Consensus        79 -------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~  147 (348)
                             ++|+|||+|+....... +.+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+.   
T Consensus        81 ~~~~~~~~~d~vi~~Ag~~~~~~~-~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~---  153 (255)
T 1fmc_A           81 FAISKLGKVDILVNNAGGGGPKPF-DMPMADF--RRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN---  153 (255)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCT-TCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC---
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCC-CCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCC---
Confidence                   79999999997654321 2222333  4789999999999999885    334 6899999998754221   


Q ss_pred             CCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhh
Q 035965          148 GEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSP  224 (348)
Q Consensus       148 ~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  224 (348)
                                            ++...|+.+|.+.|.+++.++++.   +++++++||+.++++.........  .....
T Consensus       154 ----------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~--~~~~~  209 (255)
T 1fmc_A          154 ----------------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE--IEQKM  209 (255)
T ss_dssp             ----------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHH--HHHHH
T ss_pred             ----------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChH--HHHHH
Confidence                                  134579999999999999988763   899999999999987533211111  11111


Q ss_pred             hcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEec-cCcCh
Q 035965          225 ITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR---AQGQYICCV-KSCPI  279 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~-~~~s~  279 (348)
                      ..+.              ..+.+++++|+|+++++++....   .+..|++++ ...|+
T Consensus       210 ~~~~--------------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          210 LQHT--------------PIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HHTC--------------SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             HhcC--------------CcccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence            1111              12237899999999999997643   244687754 45554

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.94  E-value=7.3e-27  Score=208.30  Aligned_cols=230  Identities=16%  Similarity=0.111  Sum_probs=162.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc------ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL------QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      ||+|+|||||||||++++++|+++|++|++++|+....      .+..+  ...+++++.+|++|++++.++++++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~l~~~~~~~d~vi   81 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF--KQLGAKLIEASLDDHQRLVDALKQVDVVI   81 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH--HTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHH--HhCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence            57899999999999999999999999999999985421      11111  12478999999999999999999999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      |+++.....                 .|+.++.+++++|++.+.+++||+ |+   ++....     .+   ..+.    
T Consensus        82 ~~a~~~~~~-----------------~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~~-----~~---~~~~----  128 (313)
T 1qyd_A           82 SALAGGVLS-----------------HHILEQLKLVEAIKEAGNIKRFLP-SE---FGMDPD-----IM---EHAL----  128 (313)
T ss_dssp             ECCCCSSSS-----------------TTTTTHHHHHHHHHHSCCCSEEEC-SC---CSSCTT-----SC---CCCC----
T ss_pred             ECCccccch-----------------hhHHHHHHHHHHHHhcCCCceEEe-cC---CcCCcc-----cc---ccCC----
Confidence            999864321                 145668899999998875789985 32   322111     11   1110    


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCC
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS  244 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (348)
                          .+..+.| .+|..+|.+++.    .+++++++||+.++|+......... .  .....++  .+...+   .+++.
T Consensus       129 ----~p~~~~y-~sK~~~e~~~~~----~g~~~~ilrp~~~~~~~~~~~~~~~-~--~~~~~~~--~~~~~~---~g~~~  191 (313)
T 1qyd_A          129 ----QPGSITF-IDKRKVRRAIEA----ASIPYTYVSSNMFAGYFAGSLAQLD-G--HMMPPRD--KVLIYG---DGNVK  191 (313)
T ss_dssp             ----SSTTHHH-HHHHHHHHHHHH----TTCCBCEEECCEEHHHHTTTSSCTT-C--CSSCCSS--EECCBT---TSCSE
T ss_pred             ----CCCcchH-HHHHHHHHHHHh----cCCCeEEEEeceecccccccccccc-c--cccCCCC--eEEEeC---CCCce
Confidence                0124568 999999998864    5899999999999886432110000 0  0001111  222222   34478


Q ss_pred             cceeeHHHHHHHHHHhhcCCCC-CceEEE-ec-cCcChHHHHHHHHHhCCC
Q 035965          245 IALVHIEDICNAHIFLMENDRA-QGQYIC-CV-KSCPISEFIDHLKLEYPS  292 (348)
Q Consensus       245 r~~i~v~D~a~~~~~~~~~~~~-~~~y~~-~~-~~~s~~el~~~i~~~~~~  292 (348)
                      ++|+|++|+|++++.+++++.. ++.|++ ++ +.+|+.|+++.+.+.+|+
T Consensus       192 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  242 (313)
T 1qyd_A          192 GIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ  242 (313)
T ss_dssp             EEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             EEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCC
Confidence            8999999999999999998754 555654 44 689999999999999886

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.94  E-value=1.3e-25  Score=194.72  Aligned_cols=214  Identities=17%  Similarity=0.154  Sum_probs=160.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +++|+||||||+|+||++++++|+++|++|++++|+..+..       ..++.++.+|++|++++.++++       ++|
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD   98 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-------DPDIHTVAGDISKPETADRIVREGIERFGRID   98 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-------STTEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-------cCceEEEEccCCCHHHHHHHHHHHHHHCCCCC
Confidence            34679999999999999999999999999999999765431       1268899999999999888775       799


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+||........+.+.++|  ...+++|+.++.++++++.    +.+ .+++|++||...+.....           
T Consensus        99 ~lv~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~-----------  164 (260)
T 3un1_A           99 SLVNNAGVFLAKPFVEMTQEDY--DHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMVG-----------  164 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBTT-----------
T ss_pred             EEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCCC-----------
Confidence            9999999865544334444444  5789999999999999873    444 679999999764322211           


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                  .+...|+.||.+.+.+.+.++.+.   |+++..++||.|+++.....   ..    ....+.   .  
T Consensus       165 ------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~----~~~~~~---~--  220 (260)
T 3un1_A          165 ------------MPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE---TH----STLAGL---H--  220 (260)
T ss_dssp             ------------CCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG---GH----HHHHTT---S--
T ss_pred             ------------CccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH---HH----HHHhcc---C--
Confidence                        144679999999999999999886   89999999999999864321   11    111111   1  


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDRAQG-QYICCVK  275 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~  275 (348)
                              ..+.+.+++|+|++++++.+.....| .+++.+.
T Consensus       221 --------p~~r~~~~~dva~av~~L~~~~~itG~~i~vdGG  254 (260)
T 3un1_A          221 --------PVGRMGEIRDVVDAVLYLEHAGFITGEILHVDGG  254 (260)
T ss_dssp             --------TTSSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             --------CCCCCcCHHHHHHHHHHhcccCCCCCcEEEECCC
Confidence                    12337799999999999966555555 5676543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.94  E-value=1.2e-26  Score=205.85  Aligned_cols=243  Identities=14%  Similarity=0.044  Sum_probs=169.1

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCC-CCCeEEEEccCCCcchHHHhhc-----
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTR-SDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~-~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      ..+++|+|+||||+|+||++++++|+++|++|++++|+..+. .... +... ..++.++.+|++|.+++.++++     
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999986543 1111 1000 2468999999999998887765     


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                        .+|+|||+||............++|  ...+++|+.++.++++++...    ...++||++||..++.+.+       
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------  172 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAW--KTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG-------  172 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT-------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC-------
Confidence              4699999999754322222222333  478999999999998887542    2257999999986543211       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCC-CchHHHHHhhhcCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSV-PSSIQVLLSPITGD  228 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~-~~~~~~~~~~~~~~  228 (348)
                                        +...|+.+|.+.|.+++.++.+   .+++++++||+.++++...... +.... ....... 
T Consensus       173 ------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~-  232 (302)
T 1w6u_A          173 ------------------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF-EKEMIGR-  232 (302)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHH-HHHHHTT-
T ss_pred             ------------------CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhh-HHHHHhc-
Confidence                              3457999999999999999887   6899999999999998432211 11110 0111111 


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEecc-CcChHHHHHHHHHhCC
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR---AQGQYICCVK-SCPISEFIDHLKLEYP  291 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~-~~s~~el~~~i~~~~~  291 (348)
                         .+          ...+++++|+|+++++++....   .+..|++.+. ..++.|+++.+.+..+
T Consensus       233 ---~p----------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          233 ---IP----------CGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             ---CT----------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             ---CC----------cCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence               11          1237799999999999987543   2446777554 7788888777776654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.94  E-value=8.5e-26  Score=193.22  Aligned_cols=202  Identities=10%  Similarity=0.082  Sum_probs=138.0

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      ..++||+||||||+|+||++|+++|+++| ++|++++|++.+. ...     ..+++++.+|++|++++.++++++|+||
T Consensus        19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~D~vv   93 (236)
T 3qvo_A           19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-----PTNSQIIMGDVLNHAALKQAMQGQDIVY   93 (236)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-----CTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             ecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-----cCCcEEEEecCCCHHHHHHHhcCCCEEE
Confidence            34567899999999999999999999999 8999999987654 221     2478999999999999999999999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      |+++..             .  .     ...+.++++++++.+ .++||++||..++...+...   .+..+....    
T Consensus        94 ~~a~~~-------------~--~-----~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~---~~~~~~~~~----  145 (236)
T 3qvo_A           94 ANLTGE-------------D--L-----DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKF---VEWNNAVIG----  145 (236)
T ss_dssp             EECCST-------------T--H-----HHHHHHHHHHHHHTT-CCEEEEECCCCC-------------------C----
T ss_pred             EcCCCC-------------c--h-----hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCccc---ccchhhccc----
Confidence            999741             1  1     123668999999888 88999999998765543310   122222211    


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCC
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS  244 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (348)
                               .+...|..+|..++    ..+++++++||+.++++.....         ...... ..           ..
T Consensus       146 ---------~~~~~~~~~~~~l~----~~gi~~~~vrPg~i~~~~~~~~---------~~~~~~-~~-----------~~  191 (236)
T 3qvo_A          146 ---------EPLKPFRRAADAIE----ASGLEYTILRPAWLTDEDIIDY---------ELTSRN-EP-----------FK  191 (236)
T ss_dssp             ---------GGGHHHHHHHHHHH----TSCSEEEEEEECEEECCSCCCC---------EEECTT-SC-----------CS
T ss_pred             ---------chHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCcce---------EEeccC-CC-----------CC
Confidence                     12333444455443    4689999999999999754321         000000 00           01


Q ss_pred             cceeeHHHHHHHHHHhhcCCC--CCceEEEecc
Q 035965          245 IALVHIEDICNAHIFLMENDR--AQGQYICCVK  275 (348)
Q Consensus       245 r~~i~v~D~a~~~~~~~~~~~--~~~~y~~~~~  275 (348)
                      ..+++++|+|++++.++.++.  .++.|++++.
T Consensus       192 ~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~  224 (236)
T 3qvo_A          192 GTIVSRKSVAALITDIIDKPEKHIGENIGINQP  224 (236)
T ss_dssp             CSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECS
T ss_pred             CcEECHHHHHHHHHHHHcCcccccCeeEEecCC
Confidence            238999999999999999876  4567777654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.94  E-value=4.1e-26  Score=198.06  Aligned_cols=228  Identities=15%  Similarity=0.056  Sum_probs=160.6

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +.+++|+|+||||+|+||++++++|+++|++|++++|+..+. ... .+.....++.++.+|++|.+++.++++      
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE   88 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            345678999999999999999999999999999999986533 111 111113468999999999998887765      


Q ss_pred             -CCCEEEEccccCc-cccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 -GCDGVFHVAASME-FDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 -~~d~Vih~a~~~~-~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                       ++|+|||+||... .....+.+.++|  ...+++|+.++.++++++..    .+ ..+||++||...+.+.+.      
T Consensus        89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~------  159 (260)
T 3awd_A           89 GRVDILVACAGICISEVKAEDMTDGQW--LKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRP------  159 (260)
T ss_dssp             SCCCEEEECCCCCCCSCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSS------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHH--HHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccCCC------
Confidence             6899999999754 222122222223  47899999999999998865    24 579999999764322111      


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                       .+...|+.+|.+.|.+++.++++   ++++++++||+.++++........ .........+. 
T Consensus       160 -----------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~-  220 (260)
T 3awd_A          160 -----------------QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEK-PELYDAWIAGT-  220 (260)
T ss_dssp             -----------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTC-HHHHHHHHHTC-
T ss_pred             -----------------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCC-hHHHHHHHhcC-
Confidence                             13367999999999999999887   689999999999999864310000 01111111111 


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                                   ..+.+++++|+|++++.++....  ..| .|++.+.
T Consensus       221 -------------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  256 (260)
T 3awd_A          221 -------------PMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAG  256 (260)
T ss_dssp             -------------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -------------CcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCc
Confidence                         12237899999999999987532  234 5677654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.94  E-value=4.1e-26  Score=196.18  Aligned_cols=222  Identities=19%  Similarity=0.122  Sum_probs=159.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGV   83 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~V   83 (348)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+..+. .....   ..+++++.+|++|.+++.++++   .+|+|
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE---CPGIEPVCVDLGDWDATEKALGGIGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---STTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---ccCCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence            35678999999999999999999999999999999976543 22211   1357888999999999998876   47999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ||+|+..........+.++|  ...+++|+.++.++++++.+.    +..++||++||..++.+.+              
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------  144 (244)
T 1cyd_A           81 VNNAALVIMQPFLEVTKEAF--DRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP--------------  144 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------------
T ss_pred             EECCcccCCCCcccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC--------------
Confidence            99999765433222222333  478999999999999988754    2147899999987543211              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                 +...|+.+|.+.|.+++.++++   .+++++++||+.++++........ ...+.....+         
T Consensus       145 -----------~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~---------  203 (244)
T 1cyd_A          145 -----------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD-PEFARKLKER---------  203 (244)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC-HHHHHHHHHH---------
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC-HHHHHHHHhc---------
Confidence                       3457999999999999998877   589999999999999743210000 0011111111         


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCV  274 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  274 (348)
                           ...+++++++|+|++++++++.+.  ..| .+++.+
T Consensus       204 -----~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  239 (244)
T 1cyd_A          204 -----HPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDA  239 (244)
T ss_dssp             -----STTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred             -----CCccCCCCHHHHHHHHHHHhCchhhcccCCEEEECC
Confidence                 123569999999999999998653  234 455544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.94  E-value=4.6e-26  Score=202.64  Aligned_cols=223  Identities=22%  Similarity=0.254  Sum_probs=159.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc----c---cccccCCCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL----Q---IFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~----~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      ||+|+|||||||||++|+++|+++|++|++++|+....    .   +..+  ...+++++.+|++|++++.++++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l--~~~~v~~v~~D~~d~~~l~~~~~~~d~v   81 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF--KASGANIVHGSIDDHASLVEAVKNVDVV   81 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH--HTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH--HhCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence            57899999999999999999999999999999975421    0   1111  1247899999999999999999999999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      ||+++...                     +.++.+++++|++.+.+++||+ |+   ++..         .+|..+..  
T Consensus        82 i~~a~~~~---------------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~---------~~~~~~~~--  125 (308)
T 1qyc_A           82 ISTVGSLQ---------------------IESQVNIIKAIKEVGTVKRFFP-SE---FGND---------VDNVHAVE--  125 (308)
T ss_dssp             EECCCGGG---------------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSC---------TTSCCCCT--
T ss_pred             EECCcchh---------------------hhhHHHHHHHHHhcCCCceEee-cc---cccC---------ccccccCC--
Confidence            99998532                     2235689999988765788884 43   2211         11222111  


Q ss_pred             hhhccCCC-cchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCC
Q 035965          164 HVWNKKAS-GWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRM  242 (348)
Q Consensus       164 ~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (348)
                             | .+.| .+|..+|.+++.    .+++++++||+.++|.........    ......+  ..+...+   .++
T Consensus       126 -------p~~~~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~---~~~  184 (308)
T 1qyc_A          126 -------PAKSVF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQA----GLTAPPR--DKVVILG---DGN  184 (308)
T ss_dssp             -------THHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCT----TCSSCCS--SEEEEET---TSC
T ss_pred             -------cchhHH-HHHHHHHHHHHh----cCCCeEEEEeceeccccccccccc----cccCCCC--CceEEec---CCC
Confidence                   2 3568 999999998865    479999999999988643221100    0000111  1222222   344


Q ss_pred             CCcceeeHHHHHHHHHHhhcCCCC-CceEEE-e-ccCcChHHHHHHHHHhCCC
Q 035965          243 GSIALVHIEDICNAHIFLMENDRA-QGQYIC-C-VKSCPISEFIDHLKLEYPS  292 (348)
Q Consensus       243 ~~r~~i~v~D~a~~~~~~~~~~~~-~~~y~~-~-~~~~s~~el~~~i~~~~~~  292 (348)
                      +.++|+|++|+|+++..+++++.. ++.|++ + ++.+|+.|+++.+.+.+|.
T Consensus       185 ~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  237 (308)
T 1qyc_A          185 ARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK  237 (308)
T ss_dssp             CEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred             ceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCC
Confidence            788999999999999999988754 455654 4 4689999999999999986

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.94  E-value=4.1e-26  Score=197.38  Aligned_cols=232  Identities=14%  Similarity=0.058  Sum_probs=160.9

Q ss_pred             CCCCCcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCe-EEEEccCCCcchHHHhh-
Q 035965            1 MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRL-RLFQADLQVEGSFDKAV-   77 (348)
Q Consensus         1 m~~~~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~-   77 (348)
                      |.....+.+++++|+||||+|+||++++++|+++|++|++++|+..+. ......  ..++ .++.+|++|.+++.+++ 
T Consensus         1 m~~~~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~   78 (254)
T 2wsb_A            1 MDYRTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL--GAAVAARIVADVTDAEAMTAAAA   78 (254)
T ss_dssp             CCTTTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--GGGEEEEEECCTTCHHHHHHHHH
T ss_pred             CCcccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--cccceeEEEEecCCHHHHHHHHH
Confidence            454444556678999999999999999999999999999999986543 211110  1245 88999999999888776 


Q ss_pred             -----cCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCC
Q 035965           78 -----MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSG  148 (348)
Q Consensus        78 -----~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  148 (348)
                           .++|+|||+||........+...++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+.+.  
T Consensus        79 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~--  153 (254)
T 2wsb_A           79 EAEAVAPVSILVNSAGIARLHDALETDDATW--RQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNRP--  153 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCSTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSS--
T ss_pred             HHHhhCCCcEEEECCccCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCCCC--
Confidence                 36899999999765443333333333  4788999999887777664    344 689999999875432211  


Q ss_pred             CCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhh
Q 035965          149 EWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPI  225 (348)
Q Consensus       149 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~  225 (348)
                                           .+...|+.+|.+.|.+++.++++.   +++++++||+.++++....... .........
T Consensus       154 ---------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~  211 (254)
T 2wsb_A          154 ---------------------QFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE-RPELFETWL  211 (254)
T ss_dssp             ---------------------SCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT-CHHHHHHHH
T ss_pred             ---------------------CcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc-ChHHHHHHH
Confidence                                 133679999999999999988774   8999999999999874321000 000011111


Q ss_pred             cCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          226 TGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ...              ..+.+++++|+|+++++++....  ..| .+++.+.
T Consensus       212 ~~~--------------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          212 DMT--------------PMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             HTS--------------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hcC--------------CCCCCCCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            110              12338899999999999987532  234 4566544

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.94  E-value=1.2e-26  Score=194.54  Aligned_cols=198  Identities=15%  Similarity=0.070  Sum_probs=150.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEEEEcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGVFHVA   87 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~Vih~a   87 (348)
                      |+|+||||+|+||++++++|+++  +|++++|++.+. ......   .. +++.+|++|++++.++++   ++|+|||+|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~---~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV---GA-RALPADLADELEAKALLEEAGPLDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH---TC-EECCCCTTSHHHHHHHHHHHCSEEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc---cC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECC
Confidence            57999999999999999999988  999999976543 222111   12 788999999999999887   899999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      |........+.+.++|  ...+++|+.++.++++++++.+ .++||++||..++.+.                       
T Consensus        75 g~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~~~-----------------------  128 (207)
T 2yut_A           75 GKAGRASVREAGRDLV--EEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYVQV-----------------------  128 (207)
T ss_dssp             CCCCCBCSCC---CHH--HHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHHSS-----------------------
T ss_pred             CcCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhccCC-----------------------
Confidence            9764432222223333  4789999999999999997666 7899999998754321                       


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCC
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS  244 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (348)
                        .+.+.|+.+|.+.|.+++.++++   .+++++++||+.++++...               +            .+...
T Consensus       129 --~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~---------------~------------~~~~~  179 (207)
T 2yut_A          129 --PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA---------------P------------LGGPP  179 (207)
T ss_dssp             --TTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG---------------G------------GTSCC
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc---------------c------------cCCCC
Confidence              14467999999999999998877   6899999999999987411               0            00123


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCceE
Q 035965          245 IALVHIEDICNAHIFLMENDRAQGQY  270 (348)
Q Consensus       245 r~~i~v~D~a~~~~~~~~~~~~~~~y  270 (348)
                      +.+++++|+|++++.+++++..+.++
T Consensus       180 ~~~~~~~dva~~~~~~~~~~~~~~~~  205 (207)
T 2yut_A          180 KGALSPEEAARKVLEGLFREPVPALL  205 (207)
T ss_dssp             TTCBCHHHHHHHHHHHHC--CCCSCC
T ss_pred             CCCCCHHHHHHHHHHHHhCCCCcccc
Confidence            55999999999999999987654443

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.94  E-value=5.4e-26  Score=197.14  Aligned_cols=231  Identities=16%  Similarity=0.131  Sum_probs=164.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..+. .....  ...++.++.+|++|.+++.++++       ++
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE--IGPAAYAVQMDVTRQDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--HCTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--hCCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999999976544 22211  12468899999999998888776       79


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||........+.+.++|  ...+++|+.++.++++++...    +...+||++||...+.+.+           
T Consensus        84 d~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  150 (259)
T 4e6p_A           84 DILVNNAALFDLAPIVEITRESY--EKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA-----------  150 (259)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-----------
T ss_pred             CEEEECCCcCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC-----------
Confidence            99999999865544334444445  578999999999999988643    2146899999987543221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcC-CCCcc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG-DSKFF  232 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~  232 (348)
                                    +...|+.||.+.+.+.+.++.+.   ++++..++|+.|+++....    ....+...... .....
T Consensus       151 --------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~  212 (259)
T 4e6p_A          151 --------------LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG----VDALFARYENRPRGEKK  212 (259)
T ss_dssp             --------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH----HHHHHHHHHTCCTTHHH
T ss_pred             --------------CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh----hhhhhhhhccCChHHHH
Confidence                          33579999999999999998764   8999999999999985321    10111111111 01111


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  275 (348)
                      ...+   .....+.+.+++|+|+++++++.....   +..|++.+.
T Consensus       213 ~~~~---~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG  255 (259)
T 4e6p_A          213 RLVG---EAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGG  255 (259)
T ss_dssp             HHHH---HHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             HHHh---ccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcC
Confidence            1111   112456799999999999998875432   446777554

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.94  E-value=4.3e-26  Score=203.85  Aligned_cols=220  Identities=19%  Similarity=0.170  Sum_probs=158.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-c-cccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-Q-IFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |+++|+|||||||||++++++|+++|++|++++|++... . +..+  ...+++++.+|+.|++++.++++++|+|||++
T Consensus        10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l--~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a   87 (318)
T 2r6j_A           10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEF--QSLGAIIVKGELDEHEKLVELMKKVDVVISAL   87 (318)
T ss_dssp             CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHH--HHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHh--hcCCCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            346899999999999999999999999999999987522 1 1111  11368999999999999999999999999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      +...                     +.++.+++++|++.+.+++||+ |+   ++..         .+|.....      
T Consensus        88 ~~~~---------------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~---------~~~~~~~~------  127 (318)
T 2r6j_A           88 AFPQ---------------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVE---------EDRINALP------  127 (318)
T ss_dssp             CGGG---------------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSC---------TTTCCCCH------
T ss_pred             chhh---------------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccC---------cccccCCC------
Confidence            8431                     2336789999988765788884 43   2211         12211110      


Q ss_pred             cCCC-cchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhh-hcCCCCccccccccccCCCCc
Q 035965          168 KKAS-GWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSP-ITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       168 ~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r  245 (348)
                         | ...| .+|..+|.+++.    .+++++++||+.+++..        ...+... ..+.  .+...+   .+++.+
T Consensus       128 ---p~~~~y-~sK~~~e~~~~~----~~~~~~~lr~~~~~~~~--------~~~~~~~~~~~~--~~~~~~---~~~~~~  186 (318)
T 2r6j_A          128 ---PFEALI-ERKRMIRRAIEE----ANIPYTYVSANCFASYF--------INYLLRPYDPKD--EITVYG---TGEAKF  186 (318)
T ss_dssp             ---HHHHHH-HHHHHHHHHHHH----TTCCBEEEECCEEHHHH--------HHHHHCTTCCCS--EEEEET---TSCCEE
T ss_pred             ---CcchhH-HHHHHHHHHHHh----cCCCeEEEEcceehhhh--------hhhhccccCCCC--ceEEec---CCCcee
Confidence               2 3468 999999988764    58999999999877641        1112211 1222  222222   334788


Q ss_pred             ceeeHHHHHHHHHHhhcCCCC-CceEEE-e-ccCcChHHHHHHHHHhCCC
Q 035965          246 ALVHIEDICNAHIFLMENDRA-QGQYIC-C-VKSCPISEFIDHLKLEYPS  292 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~-~~~y~~-~-~~~~s~~el~~~i~~~~~~  292 (348)
                      +|+|++|++++++.+++++.. ++.|++ + ++.+|+.|+++.+.+.+|.
T Consensus       187 ~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  236 (318)
T 2r6j_A          187 AMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGK  236 (318)
T ss_dssp             EEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             eEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCC
Confidence            999999999999999988754 455554 4 4689999999999999886

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.94  E-value=2.8e-26  Score=191.46  Aligned_cols=192  Identities=16%  Similarity=0.111  Sum_probs=147.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcC---CCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMG---CDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~d~Vih~a~   88 (348)
                      |+|+||||+|+||++++++|+ +|++|++++|+..               ++.+|++|.+++.+++++   +|+|||+|+
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~---------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag   67 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG---------------DVTVDITNIDSIKKMYEQVGKVDAIVSATG   67 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS---------------SEECCTTCHHHHHHHHHHHCCEEEEEECCC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc---------------ceeeecCCHHHHHHHHHHhCCCCEEEECCC
Confidence            479999999999999999999 9999999999753               377999999999888764   899999999


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      ..........+.++|  ...+++|+.++.++++++.+.- ..++||++||...+.+.                       
T Consensus        68 ~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-----------------------  122 (202)
T 3d7l_A           68 SATFSPLTELTPEKN--AVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI-----------------------  122 (202)
T ss_dssp             CCCCCCGGGCCHHHH--HHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC-----------------------
T ss_pred             CCCCCChhhCCHHHH--HHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC-----------------------
Confidence            754433223322333  4678999999999999998761 12689999997643211                       


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                        ++...|+.+|.+.|.+++.++.+.  +++++++||+.++++...            .  +         .   ....+
T Consensus       123 --~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~------------~--~---------~---~~~~~  174 (202)
T 3d7l_A          123 --VQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK------------L--E---------P---FFEGF  174 (202)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH------------H--G---------G---GSTTC
T ss_pred             --CccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh------------h--h---------h---hcccc
Confidence              134579999999999999988764  899999999999987421            0  0         0   01235


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEE
Q 035965          246 ALVHIEDICNAHIFLMENDRAQGQYIC  272 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~~~~y~~  272 (348)
                      ++++++|+|++++.++.+...++.|++
T Consensus       175 ~~~~~~dva~~~~~~~~~~~~G~~~~v  201 (202)
T 3d7l_A          175 LPVPAAKVARAFEKSVFGAQTGESYQV  201 (202)
T ss_dssp             CCBCHHHHHHHHHHHHHSCCCSCEEEE
T ss_pred             CCCCHHHHHHHHHHhhhccccCceEec
Confidence            599999999999998865444556665

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.94  E-value=8.5e-26  Score=196.77  Aligned_cols=225  Identities=17%  Similarity=0.148  Sum_probs=145.9

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhh-------
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAV-------   77 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~-------   77 (348)
                      +.+++|+||||||+|+||+++++.|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.+++       
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            345678999999999999999999999999999999976543 2111 1112246889999999998887776       


Q ss_pred             -cCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCC
Q 035965           78 -MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        78 -~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                       .++|+|||+||........+.+.++|  ...+++|+.++.++++++.    +.+ .++||++||..++.+.+       
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-------  159 (266)
T 1xq1_A           90 GGKLDILINNLGAIRSKPTLDYTAEDF--SFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSAS-------  159 (266)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCCC-------
Confidence             46899999999764433222333333  4789999999999999884    445 68999999987553221       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        +...|+.+|.+.|.+++.++++.   +++++++||+.++++.......   ..+......  
T Consensus       160 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~--  216 (266)
T 1xq1_A          160 ------------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD---DEFKKVVIS--  216 (266)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC---HHHHHHHHh--
Confidence                              23579999999999999988774   8999999999999986442110   000000000  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                       ..+          ...+++++|+|+++.+++....  ..| .+++.+.
T Consensus       217 -~~~----------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  254 (266)
T 1xq1_A          217 -RKP----------LGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG  254 (266)
T ss_dssp             ------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred             -cCC----------CCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence             011          1237899999999999987532  234 5666543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=8.6e-26  Score=198.00  Aligned_cols=240  Identities=18%  Similarity=0.146  Sum_probs=156.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-c---cCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-K---WTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~---~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      +++|+++||||+|+||++++++|+++|++|++++|+..+. .... +   .....++.++.+|++|.+++.++++     
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999986543 2111 1   1112368899999999998888776     


Q ss_pred             --CCCEEEEccccCcccccccc----ccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEecccee-eeecCCCC
Q 035965           79 --GCDGVFHVAASMEFDINVKD----NIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVST-ITAKDSSG  148 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~-~~~~~~~~  148 (348)
                        ++|+|||+||........+.    +.++|  ...+++|+.++.++++++...   . .++||++||... +.+.+   
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~---  157 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESY--DATLNLNLRSVIALTKKAVPHLSST-KGEIVNISSIASGLHATP---  157 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTTSSSSCCT---
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHhhc-CCeEEEEecccccccCCC---
Confidence              79999999997543221122    33344  578999999999999988764   1 279999999864 32111   


Q ss_pred             CCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCC---Cch---HH
Q 035965          149 EWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSV---PSS---IQ  219 (348)
Q Consensus       149 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~---~~~---~~  219 (348)
                                            +...|+.||.+.+.+.+.++.+   ++++++++||+.|+++......   +..   ..
T Consensus       158 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  215 (278)
T 1spx_A          158 ----------------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYS  215 (278)
T ss_dssp             ----------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HH
T ss_pred             ----------------------CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhH
Confidence                                  3357999999999999998866   5899999999999998543210   000   00


Q ss_pred             HHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC---C-CceEEEec-cCcChHHHHHHHHHhC
Q 035965          220 VLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR---A-QGQYICCV-KSCPISEFIDHLKLEY  290 (348)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~-~~~y~~~~-~~~s~~el~~~i~~~~  290 (348)
                      .......    ..+          .+.+++++|+|+++++++..+.   . +..+++.+ ...++.|+++.+.+.+
T Consensus       216 ~~~~~~~----~~p----------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          216 TMATMKE----CVP----------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             HHHHHHH----HCT----------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             HHHHHHh----cCC----------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            0001100    011          1237899999999999987542   3 44567754 4899999999988753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.94  E-value=1.4e-25  Score=192.96  Aligned_cols=222  Identities=16%  Similarity=0.115  Sum_probs=161.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+....  .... +.....++.++.+|++|.+++.++++       
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3568999999999999999999999999999998854322  1111 11123468899999999998887775       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|++||+||........+.+.++|  ...+++|+.++.++++++    ++.+ .++||++||...+.+.+         
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  149 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEW--DDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNP---------  149 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT---------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCC---------
Confidence            7899999999865544334444444  578999999999999998    3444 57999999987654321         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      +...|+.||.+.+.+.+.++.+   +++++..++|+.|.++......+..   ........   
T Consensus       150 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~---~~~~~~~~---  207 (246)
T 3osu_A          150 ----------------GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDEL---KEQMLTQI---  207 (246)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHH---HHHHHTTC---
T ss_pred             ----------------CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHH---HHHHHhcC---
Confidence                            3357999999999999998874   5899999999999998654321111   11111111   


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  275 (348)
                       +          .+.+.+++|+|+++.+++.....   +..+++.+.
T Consensus       208 -p----------~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG  243 (246)
T 3osu_A          208 -P----------LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG  243 (246)
T ss_dssp             -T----------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -C----------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence             1          22267899999999999876533   345666544

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.94  E-value=1.5e-25  Score=199.25  Aligned_cols=223  Identities=18%  Similarity=0.134  Sum_probs=158.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC-------Ccc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP-------GKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~-------~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      ||+|+|||||||||++|+++|+++|++|++++|++       .+. .+..+  ...+++++.+|++|++++.++++++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l--~~~~v~~v~~D~~d~~~l~~~~~~~d~   79 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNY--QSLGVILLEGDINDHETLVKAIKQVDI   79 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHH--HHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHH--HhCCCEEEEeCCCCHHHHHHHHhCCCE
Confidence            57899999999999999999999999999999986       111 11111  113689999999999999999999999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI  162 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~  162 (348)
                      |||+++...                     +.++.+++++|++.+.+++||+ |+   ++..         .+|..+.. 
T Consensus        80 vi~~a~~~~---------------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~---------~~~~~~~~-  124 (307)
T 2gas_A           80 VICAAGRLL---------------------IEDQVKIIKAIKEAGNVKKFFP-SE---FGLD---------VDRHDAVE-  124 (307)
T ss_dssp             EEECSSSSC---------------------GGGHHHHHHHHHHHCCCSEEEC-SC---CSSC---------TTSCCCCT-
T ss_pred             EEECCcccc---------------------cccHHHHHHHHHhcCCceEEee-cc---cccC---------cccccCCC-
Confidence            999998532                     2336789999988765788883 32   2211         11211111 


Q ss_pred             chhhccCCC-cchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccC
Q 035965          163 HHVWNKKAS-GWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNR  241 (348)
Q Consensus       163 ~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (348)
                              | .+.| .+|..+|.+++.    .+++++++||+.++++........    ......+  ..+...+   .+
T Consensus       125 --------p~~~~y-~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~---~~  182 (307)
T 2gas_A          125 --------PVRQVF-EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLRNLAQL----DATDPPR--DKVVILG---DG  182 (307)
T ss_dssp             --------THHHHH-HHHHHHHHHHHH----HTCCBEEEECCEETTTTGGGTTCT----TCSSCCS--SEEEEET---TS
T ss_pred             --------cchhHH-HHHHHHHHHHHH----cCCCeEEEEcceeecccccccccc----ccccCCC--CeEEEec---CC
Confidence                    2 3579 999999998865    489999999999988643211000    0000111  1222222   33


Q ss_pred             CCCcceeeHHHHHHHHHHhhcCCCC-CceEEE-e-ccCcChHHHHHHHHHhCCC
Q 035965          242 MGSIALVHIEDICNAHIFLMENDRA-QGQYIC-C-VKSCPISEFIDHLKLEYPS  292 (348)
Q Consensus       242 ~~~r~~i~v~D~a~~~~~~~~~~~~-~~~y~~-~-~~~~s~~el~~~i~~~~~~  292 (348)
                      ++.++|+|++|+|++++.+++++.. ++.|++ + ++.+|+.|+++.+.+.+|.
T Consensus       183 ~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~  236 (307)
T 2gas_A          183 NVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGK  236 (307)
T ss_dssp             CSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred             CcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCC
Confidence            4778999999999999999988754 445544 4 3689999999999999886

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.94  E-value=2.6e-25  Score=191.15  Aligned_cols=221  Identities=19%  Similarity=0.157  Sum_probs=159.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGV   83 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~V   83 (348)
                      .+++++|+||||+|+||++++++|+++|++|++++|+..+. .....   ..+++++.+|++|.+++.++++   ++|+|
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE---CPGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---STTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCCCEEEEeCCCHHHHHHHHHHcCCCCEE
Confidence            35578999999999999999999999999999999976543 22111   1256788999999999998886   58999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ||+||........+...++|  ...+++|+.++.++++++...    +..++||++||...+.+.               
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------  143 (244)
T 3d3w_A           81 VNNAAVALLQPFLEVTKEAF--DRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV---------------  143 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---------------
T ss_pred             EECCccCCCcchhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC---------------
Confidence            99999765432222222333  578999999999999988653    214789999998643211               


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCC--CCchHHHHHhhhcCCCCcccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSS--VPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                ++.+.|+.||.+.|.+++.++++   .+++++++||+.|+++.....  .+....   .....       
T Consensus       144 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~-------  203 (244)
T 3d3w_A          144 ----------TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAK---TMLNR-------  203 (244)
T ss_dssp             ----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHH---HHHHT-------
T ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHH---HHHhh-------
Confidence                      13467999999999999998876   479999999999999853210  011111   11111       


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                             ...+.+++++|+|+++++++....  ..| .|++.+.
T Consensus       204 -------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 3d3w_A          204 -------IPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             -------CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -------CCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence                   123448899999999999998642  234 5777554

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.93  E-value=1.3e-25  Score=195.36  Aligned_cols=228  Identities=18%  Similarity=0.077  Sum_probs=156.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCC-------CCeEEEEccCCCcchHHHhhc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRS-------DRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~-------~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      .+++++|+||||+|+||+++++.|+++|++|++++|+..+. .... +....       .++.++.+|++|.+++.++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            35678999999999999999999999999999999976543 2111 11111       468899999999998887765


Q ss_pred             C-------C-CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCC
Q 035965           79 G-------C-DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDS  146 (348)
Q Consensus        79 ~-------~-d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~  146 (348)
                      .       + |+|||+||..........+.++|  ...+++|+.++.++++++...    +..++||++||...+.+.+ 
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-  160 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDW--DKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV-  160 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT-
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHH--HHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC-
Confidence            3       4 99999999765432222223333  578999999999999998764    1136899999986543221 


Q ss_pred             CCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHh
Q 035965          147 SGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLS  223 (348)
Q Consensus       147 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~  223 (348)
                                              +...|+.+|.+.|.+++.++.+   .+++++++||+.++++......+..   ...
T Consensus       161 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~  213 (264)
T 2pd6_A          161 ------------------------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKV---VDK  213 (264)
T ss_dssp             ------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------C
T ss_pred             ------------------------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHH---HHH
Confidence                                    3457999999999999998877   6899999999999998643211100   000


Q ss_pred             hhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc-CcCh
Q 035965          224 PITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK-SCPI  279 (348)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~-~~s~  279 (348)
                      ...+    .          ....+++++|+|++++.++....  ..| .+++.+. ..+.
T Consensus       214 ~~~~----~----------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  259 (264)
T 2pd6_A          214 ITEM----I----------PMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAE  259 (264)
T ss_dssp             TGGG----C----------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC----
T ss_pred             HHHh----C----------CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceecc
Confidence            0000    1          11237899999999999987532  334 4666544 4443

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.93  E-value=1.8e-25  Score=200.03  Aligned_cols=220  Identities=17%  Similarity=0.156  Sum_probs=158.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC-Cc-----c-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP-GK-----L-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~-~~-----~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      +||+|+|||||||||++|+++|+++|++|++++|++ ..     . .+..+  ...+++++.+|++|++++.++++++|+
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~v~~v~~D~~d~~~l~~a~~~~d~   80 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEF--RSMGVTIIEGEMEEHEKMVSVLKQVDI   80 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHH--HHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHh--hcCCcEEEEecCCCHHHHHHHHcCCCE
Confidence            467899999999999999999999999999999986 21     1 11100  114789999999999999999999999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI  162 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~  162 (348)
                      |||+++...                     +.++.+++++|++.+.+++||+ |+   ++.         ..+|..+.. 
T Consensus        81 vi~~a~~~~---------------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~---------~~~~~~~~~-  125 (321)
T 3c1o_A           81 VISALPFPM---------------------ISSQIHIINAIKAAGNIKRFLP-SD---FGC---------EEDRIKPLP-  125 (321)
T ss_dssp             EEECCCGGG---------------------SGGGHHHHHHHHHHCCCCEEEC-SC---CSS---------CGGGCCCCH-
T ss_pred             EEECCCccc---------------------hhhHHHHHHHHHHhCCccEEec-cc---ccc---------CccccccCC-
Confidence            999998532                     2335789999988765788883 32   221         112222111 


Q ss_pred             chhhccCCC-cchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhh----hcCCCCccccccc
Q 035965          163 HHVWNKKAS-GWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSP----ITGDSKFFSILSS  237 (348)
Q Consensus       163 ~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  237 (348)
                              | .+.| .+|..+|.+++.    .+++++++||+.++|+..        ..+...    ..+.  .+...+ 
T Consensus       126 --------p~~~~y-~sK~~~e~~~~~----~~~~~~~lrp~~~~~~~~--------~~~~~~~~~~~~~~--~~~~~~-  181 (321)
T 3c1o_A          126 --------PFESVL-EKKRIIRRAIEA----AALPYTYVSANCFGAYFV--------NYLLHPSPHPNRND--DIVIYG-  181 (321)
T ss_dssp             --------HHHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHH--------HHHHCCCSSCCTTS--CEEEET-
T ss_pred             --------CcchHH-HHHHHHHHHHHH----cCCCeEEEEeceeccccc--------cccccccccccccC--ceEEec-
Confidence                    2 3579 999999998864    479999999999887521        111111    1121  222222 


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCCCC-CceEEE-e-ccCcChHHHHHHHHHhCCC
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMENDRA-QGQYIC-C-VKSCPISEFIDHLKLEYPS  292 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~~~-~~~y~~-~-~~~~s~~el~~~i~~~~~~  292 (348)
                        .+++.++|+|++|+|++++.++.++.. ++.|++ + ++.+|+.|+++.+.+.+|.
T Consensus       182 --~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~  237 (321)
T 3c1o_A          182 --TGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGL  237 (321)
T ss_dssp             --TSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred             --CCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCC
Confidence              344788999999999999999988754 455655 4 4699999999999999886

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.93  E-value=9.3e-26  Score=197.33  Aligned_cols=236  Identities=17%  Similarity=0.073  Sum_probs=160.5

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc-CCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVR-DPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r-~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      +.+++|+||||||+|+||++++++|+++|++|++++| +..+. ... .+.....++.++.+|++|.+++.++++     
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999 43322 111 111123468899999999998888776     


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCccc
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                        ++|+|||+|+..........+.++|  ...+++|+.++.++++++.+.- ..++||++||..+++....         
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------  165 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELF--DKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP---------  165 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC---------
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCC---------
Confidence              7899999999765432222223333  4789999999999999887641 1269999999875411111         


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.+|.+.|.+++.++++.   +++++++||+.++++....       .............
T Consensus       166 ---------------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~-------~~~~~~~~~~~~~  223 (274)
T 1ja9_A          166 ---------------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDE-------NSWHYAPGGYKGM  223 (274)
T ss_dssp             ---------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH-------HGGGTSTTCCTTC
T ss_pred             ---------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhc-------ccccccccccccC
Confidence                           33579999999999999988774   8999999999998863221       0000000000000


Q ss_pred             c---cccccccCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 035965          233 S---ILSSVSNRMGSIALVHIEDICNAHIFLMENDR---AQGQYICCVK  275 (348)
Q Consensus       233 ~---~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~  275 (348)
                      .   .......+...+.+++++|+|+++++++..+.   .+..|++++.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          224 PQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             CHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             chHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence            0   00000111234569999999999999997643   2446777654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.93  E-value=6.9e-26  Score=198.89  Aligned_cols=243  Identities=18%  Similarity=0.148  Sum_probs=171.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-c---cCCCCCeEEEEccCCCcchHHHhhc----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-K---WTRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~---~~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..+. .... +   .....++.++.+|++|.+++.++++    
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999986543 2111 1   1112268899999999998887765    


Q ss_pred             ---CCCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhcC---CcceEEEeccceeeeecCCCCCCC
Q 035965           79 ---GCDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE---SVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                         ++|++||+||.... ....+.+.++|  ...+++|+.++.++++++...-   ...+||++||...+.+..      
T Consensus        88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  159 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIGPITQVDSEAW--RRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR------  159 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC------
Confidence               68999999997332 22223333444  5789999999999999876531   146999999987653221      


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                                         +...|+.||.+.+.+.+.++.+.   ++++..++||.|+++........ .......... 
T Consensus       160 -------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~-  218 (281)
T 3svt_A          160 -------------------WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES-AELSSDYAMC-  218 (281)
T ss_dssp             -------------------TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC-HHHHHHHHHH-
T ss_pred             -------------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC-HHHHHHHHhc-
Confidence                               33579999999999999998774   59999999999988743210000 0000011000 


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEec-cCcC-hHHHHHHHHHhCCC
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCV-KSCP-ISEFIDHLKLEYPS  292 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~-~~~s-~~el~~~i~~~~~~  292 (348)
                         .          ..+.+.+++|+|+++++++.....   +..+++.+ ...+ ..|+.+++.+.++.
T Consensus       219 ---~----------p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~  274 (281)
T 3svt_A          219 ---T----------PLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGR  274 (281)
T ss_dssp             ---C----------SSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCT
T ss_pred             ---C----------CCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCC
Confidence               0          122367999999999999876432   44577754 4555 77888888888775

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.93  E-value=6.6e-26  Score=196.46  Aligned_cols=224  Identities=17%  Similarity=0.143  Sum_probs=158.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcC-CCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRD-PGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~-~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+|+||||+|+||++++++|+++|++|++++|+ +.+. .... +.....++.++.+|++|.+++.++++       
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            456899999999999999999999999999999998 5433 2111 11113468899999999999888776       


Q ss_pred             CCCEEEEcccc-CccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----C----CcceEEEeccceeeeecCCCCC
Q 035965           79 GCDGVFHVAAS-MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----E----SVKRVVLTSSVSTITAKDSSGE  149 (348)
Q Consensus        79 ~~d~Vih~a~~-~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~----~~~~~v~~SS~~~~~~~~~~~~  149 (348)
                      ++|+|||+|+. .........+.++|  ...+++|+.++.++++++...    +    ...+||++||...+.. ..   
T Consensus        85 ~id~vi~~Ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~---  158 (258)
T 3afn_B           85 GIDVLINNAGGLVGRKPLPEIDDTFY--DAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-GG---  158 (258)
T ss_dssp             SCSEEEECCCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-CC---
T ss_pred             CCCEEEECCCCcCCcCccccCCHHHH--HHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-CC---
Confidence            79999999996 33222122222223  468899999999999877532    1    1278999999764321 11   


Q ss_pred             CCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhc
Q 035965          150 WRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPIT  226 (348)
Q Consensus       150 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~  226 (348)
                                          ++...|+.+|.+.|.+++.++++.   +++++++||+.++++......+.   .......
T Consensus       159 --------------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~  215 (258)
T 3afn_B          159 --------------------PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQD---VRDRISN  215 (258)
T ss_dssp             --------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHH---HHHHHHT
T ss_pred             --------------------CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHH---HHHHHhc
Confidence                                144579999999999999988764   89999999999999864432111   1111111


Q ss_pred             CCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC---C-CceEEEecc
Q 035965          227 GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR---A-QGQYICCVK  275 (348)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~-~~~y~~~~~  275 (348)
                      +.              ..+.+++++|+|+++++++....   . +..|++.+.
T Consensus       216 ~~--------------~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg  254 (258)
T 3afn_B          216 GI--------------PMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGG  254 (258)
T ss_dssp             TC--------------TTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTT
T ss_pred             cC--------------CCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCC
Confidence            11              12348899999999999987642   2 445777655

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.93  E-value=4.1e-25  Score=187.06  Aligned_cols=200  Identities=15%  Similarity=0.120  Sum_probs=144.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHH-HCCCeEEEEEcCCC-cc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLL-ERGYIVHATVRDPG-KL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~-~~g~~V~~~~r~~~-~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      +||++|+||||+|+||++++++|+ ++|++|++++|++. +. .+.   ....+++++.+|++|.+++.++++++|+|||
T Consensus         3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~   79 (221)
T 3r6d_A            3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI---IDHERVTVIEGSFQNPGXLEQAVTNAEVVFV   79 (221)
T ss_dssp             CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH---HTSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc---cCCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence            345679999999999999999999 89999999999876 44 221   0225799999999999999999999999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +|+..                     |+. +.++++++++.+ .++||++||..++...+.      ...+..       
T Consensus        80 ~ag~~---------------------n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~------~~~~~~-------  123 (221)
T 3r6d_A           80 GAMES---------------------GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPV------ALEKWT-------  123 (221)
T ss_dssp             SCCCC---------------------HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCH------HHHHHH-------
T ss_pred             cCCCC---------------------Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCc------cccccc-------
Confidence            99842                     233 889999999888 889999999886543221      110000       


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                        .....+.|+.+|..+|.+++.    .+++++++||+.++++.......        .... ..  +         ..+
T Consensus       124 --~~~~~~~y~~~K~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~~--------~~~~-~~--~---------~~~  177 (221)
T 3r6d_A          124 --FDNLPISYVQGERQARNVLRE----SNLNYTILRLTWLYNDPEXTDYE--------LIPE-GA--Q---------FND  177 (221)
T ss_dssp             --HHTSCHHHHHHHHHHHHHHHH----SCSEEEEEEECEEECCTTCCCCE--------EECT-TS--C---------CCC
T ss_pred             --ccccccHHHHHHHHHHHHHHh----CCCCEEEEechhhcCCCCCccee--------eccC-Cc--c---------CCC
Confidence              000112799999999998764    68999999999999973322100        0000 00  0         112


Q ss_pred             ceeeHHHHHHHHHHhh--cCCCC--CceEEEe
Q 035965          246 ALVHIEDICNAHIFLM--ENDRA--QGQYICC  273 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~--~~~~~--~~~y~~~  273 (348)
                      .+++.+|+|++++.++  ..+..  ++.+.+.
T Consensus       178 ~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~  209 (221)
T 3r6d_A          178 AQVSREAVVKAIFDILHAADETPFHRTSIGVG  209 (221)
T ss_dssp             CEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEE
T ss_pred             ceeeHHHHHHHHHHHHHhcChhhhhcceeeec
Confidence            3899999999999999  76642  3445444

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.93  E-value=2.3e-25  Score=193.42  Aligned_cols=222  Identities=19%  Similarity=0.139  Sum_probs=161.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCC-CCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRS-DRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~-~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..+. .... +.... .++.++.+|++|.+++.++++       
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999999999986543 2111 11111 478999999999998887765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceee-eecCCCCCCCCc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTI-TAKDSSGEWRPV  153 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~-~~~~~~~~~~~~  153 (348)
                      ++|++||+||........+.+.++|  ...+++|+.++.++++++...    + ..+||++||.... .+.         
T Consensus        88 ~id~lvnnAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---------  155 (262)
T 3pk0_A           88 GIDVVCANAGVFPDAPLATMTPEQL--NGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITGY---------  155 (262)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBCC---------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCC---------
Confidence            7999999999865544334444445  578999999999999988764    4 6799999997632 111         


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                      ++...|+.||.+.+.+.+.++.+   +|+++..++||.|+++......+..   .......   
T Consensus       156 ----------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~---~~~~~~~---  213 (262)
T 3pk0_A          156 ----------------PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEY---IASMARS---  213 (262)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHH---HHHHHTT---
T ss_pred             ----------------CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHH---HHHHHhc---
Confidence                            13457999999999999999887   6899999999999987432211111   1111111   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                       .+ .++         +.+++|+|+++.+++....  ..| .+++.+.
T Consensus       214 -~p-~~r---------~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG  250 (262)
T 3pk0_A          214 -IP-AGA---------LGTPEDIGHLAAFLATKEAGYITGQAIAVDGG  250 (262)
T ss_dssp             -ST-TSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CC-CCC---------CcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence             11 122         6699999999999987543  344 4666543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.93  E-value=2.7e-25  Score=192.91  Aligned_cols=227  Identities=19%  Similarity=0.114  Sum_probs=159.0

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhh-------
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAV-------   77 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~-------   77 (348)
                      +.+++|+||||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.+++       
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            456678999999999999999999999999999999986543 2111 1111246888999999998888776       


Q ss_pred             -cCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCC
Q 035965           78 -MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        78 -~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                       .++|+|||+||..........+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+.+       
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------  154 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDY--SLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVP-------  154 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCT-------
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCC-------
Confidence             46999999999764433223333334  5789999999999999884    344 67999999986433211       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCC--CchHHHHHhhhcC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSV--PSSIQVLLSPITG  227 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~  227 (348)
                                        +...|+.||.+.|.+.+.++.+.   +++++.++|+.+.++......  +.....+......
T Consensus       155 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  216 (260)
T 2ae2_A          155 ------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDR  216 (260)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHT
T ss_pred             ------------------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhc
Confidence                              33579999999999999998875   799999999999876311000  0000000011000


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                                    ...+.+++++|+|+++++++....  ..| .+++.+.
T Consensus       217 --------------~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  253 (260)
T 2ae2_A          217 --------------CALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  253 (260)
T ss_dssp             --------------STTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --------------CCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence                          012348899999999999987542  234 4566544

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.93  E-value=8.5e-26  Score=196.42  Aligned_cols=234  Identities=13%  Similarity=0.127  Sum_probs=160.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCC-CCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTR-SDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~-~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..+. .... +... ..++.++.+|++|.+++.++++      
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF   83 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35678999999999999999999999999999999986543 2111 1001 2468899999999998887775      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       ++|+|||+||........+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+.+        
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  152 (263)
T 3ai3_A           84 GGADILVNNAGTGSNETIMEAADEKW--QFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPLW--------  152 (263)
T ss_dssp             SSCSEEEECCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT--------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCC--------
Confidence             7999999999765433223333344  57899999999999988753    34 57999999987543211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC-CC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG-DS  229 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~  229 (348)
                                       +...|+.||.+.+.+.+.++.+   ++++++++||+.|+++....    ....+...... ..
T Consensus       153 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~  211 (263)
T 3ai3_A          153 -----------------YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIK----TAKELTKDNGGDWK  211 (263)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH----HHHHHTTTTTCCHH
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhh----hhHhhhcccCCcHH
Confidence                             3357999999999999998877   58999999999999974221    00000000000 00


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--A-QGQYICCVK  275 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  275 (348)
                      .........  ....+.+++++|+|+++++++..+.  . +..|++.+.
T Consensus       212 ~~~~~~~~~--~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG  258 (263)
T 3ai3_A          212 GYLQSVADE--HAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGG  258 (263)
T ss_dssp             HHHHHHHHH--HCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred             HHHHHHHhc--CCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            000000000  0123448899999999999987643  2 345666543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.93  E-value=1.5e-25  Score=193.12  Aligned_cols=223  Identities=17%  Similarity=0.097  Sum_probs=157.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cC-CCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WT-RSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~-~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++++|+||||+|+||++++++|+++|++|++++|+..+. ..... .. ...++.++.+|++|.+++.++++      
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV   83 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            45678999999999999999999999999999999976543 21110 00 12468899999999999888775      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       ++|+|||+|+........+.+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+++.+        
T Consensus        84 ~~~d~vi~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~--------  152 (248)
T 2pnf_A           84 DGIDILVNNAGITRDKLFLRMSLLDW--EEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNV--------  152 (248)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCCT--------
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCCC--------
Confidence             7999999999765432222222333  4789999999977777654    334 67999999986554321        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +...|+.+|.+.|.+.+.++++   .+++++++||+.++++..... ..   .+.......  
T Consensus       153 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~-~~---~~~~~~~~~--  209 (248)
T 2pnf_A          153 -----------------GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL-SE---EIKQKYKEQ--  209 (248)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-CH---HHHHHHHHT--
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc-cH---HHHHHHHhc--
Confidence                             2357999999999999998776   479999999999998854321 11   111111100  


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--A-QGQYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  275 (348)
                       .          ..+.+++++|+|+++.+++....  . +..|++.+.
T Consensus       210 -~----------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          210 -I----------PLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             -C----------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -C----------CCCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence             0          12338899999999999987532  2 445776543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.93  E-value=1.2e-25  Score=195.69  Aligned_cols=237  Identities=16%  Similarity=0.129  Sum_probs=162.6

Q ss_pred             CCCCcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc-cccc-CCCCCeEEEEccCCCcchHHHhhc
Q 035965            2 EKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI-FSKW-TRSDRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus         2 ~~~~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~-~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      .....+.+++|+||||||+|+||++++++|+++|++|++++|+..+. .. ..+. ....++.++.+|++|.+++.++++
T Consensus         5 ~~~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~   84 (265)
T 1h5q_A            5 APGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ   84 (265)
T ss_dssp             -CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHH
Confidence            33344456678999999999999999999999999999999975543 11 1110 012468899999999988877664


Q ss_pred             -------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCC
Q 035965           79 -------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSS  147 (348)
Q Consensus        79 -------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~  147 (348)
                             .+|+|||+||..........+.++|  ...+++|+.++.++++++...    +..++||++||..++.+... 
T Consensus        85 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-  161 (265)
T 1h5q_A           85 QIDADLGPISGLIANAGVSVVKPATELTHEDF--AFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS-  161 (265)
T ss_dssp             HHHHHSCSEEEEEECCCCCCCSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE-
T ss_pred             HHHHhcCCCCEEEECCCcCCCCchhhCCHHHH--HHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc-
Confidence                   4899999999765433222223333  478999999999999988653    22478999999875432211 


Q ss_pred             CCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhh
Q 035965          148 GEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSP  224 (348)
Q Consensus       148 ~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  224 (348)
                           ..   ..         ..+...|+.+|.+.|.+++.++++   .+++++++||+.|+++......+.    ....
T Consensus       162 -----~~---~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~~~  220 (265)
T 1h5q_A          162 -----SL---NG---------SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK----IRDH  220 (265)
T ss_dssp             -----ET---TE---------ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH----HHHH
T ss_pred             -----cc---cc---------cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchh----HHHH
Confidence                 00   00         014568999999999999998876   489999999999998854321111    1111


Q ss_pred             hcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 035965          225 ITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--A-QGQYICCVK  275 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  275 (348)
                      +...   .          ..+.+++++|+|+++++++..+.  . +..|++.+.
T Consensus       221 ~~~~---~----------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  261 (265)
T 1h5q_A          221 QASN---I----------PLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  261 (265)
T ss_dssp             HHHT---C----------TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             HHhc---C----------cccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence            1100   1          11237899999999999987643  2 445766554

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.93  E-value=4.6e-25  Score=190.29  Aligned_cols=223  Identities=18%  Similarity=0.148  Sum_probs=156.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-c-cCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-K-WTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      |+|+++||||+|+||++++++|+++|++|++++|+..+. .... + .....++.++.+|++|.+++.++++       +
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            357899999999999999999999999999999976543 2111 1 1112468899999999998888775       7


Q ss_pred             CCEEEEccccCcccc---ccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCC
Q 035965           80 CDGVFHVAASMEFDI---NVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~---~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      +|+|||+||......   ..+.+.++|  ...+++|+.++.++++.+..    .+ .++||++||...+.+.+       
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-------  150 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQF--DKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAFP-------  150 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-------
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCC-------
Confidence            999999999754322   112222333  47899999999887776653    34 68999999987543211       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        +...|+.+|.+.|.+++.++++.   +++++++||+.++++........ ........... 
T Consensus       151 ------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~-  210 (250)
T 2cfc_A          151 ------------------GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQ-PELRDQVLARI-  210 (250)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTS-HHHHHHHHTTC-
T ss_pred             ------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCC-HHHHHHHHhcC-
Confidence                              34579999999999999988764   89999999999999864320000 00111111111 


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QG-QYICCVK  275 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  275 (348)
                                   ..+.+++++|+|+++++++..+..  .| .+++.+.
T Consensus       211 -------------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          211 -------------PQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             -------------TTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             -------------CCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence                         112377999999999999986532  34 4566543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.93  E-value=1.6e-24  Score=187.76  Aligned_cols=223  Identities=16%  Similarity=0.177  Sum_probs=155.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..+. .....  ...++.++.+|++|.+++.++++       +
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE--LGAAVRFRNADVTNEADATAALAFAKQEFGH   81 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH--hCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35578999999999999999999999999999999987654 22211  12468899999999998888775       7


Q ss_pred             CCEEEEccccCcccccc----ccccccchhhhhhhhhHHHHHHHHHHHhhc---------CCcceEEEeccceeeeecCC
Q 035965           80 CDGVFHVAASMEFDINV----KDNIETYVQSTVINPAIQSTLNLLKACLKS---------ESVKRVVLTSSVSTITAKDS  146 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~----~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---------~~~~~~v~~SS~~~~~~~~~  146 (348)
                      +|++||+||........    ..+.++|  ...+++|+.++.++++++...         +...+||++||...+.+.+ 
T Consensus        82 id~lv~nAg~~~~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~-  158 (257)
T 3tpc_A           82 VHGLVNCAGTAPGEKILGRSGPHALDSF--ARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI-  158 (257)
T ss_dssp             CCEEEECCCCCCCCCSEETTEECCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT-
T ss_pred             CCEEEECCCCCCCCccccccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC-
Confidence            99999999976543211    2223334  578999999999999988753         1256899999987654322 


Q ss_pred             CCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHh
Q 035965          147 SGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLS  223 (348)
Q Consensus       147 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~  223 (348)
                                              +...|+.||.+.+.+.+.++.+   +++++..++||.|.++......+.    ...
T Consensus       159 ------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----~~~  210 (257)
T 3tpc_A          159 ------------------------GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQD----VQD  210 (257)
T ss_dssp             ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------
T ss_pred             ------------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHH----HHH
Confidence                                    3357999999999999998877   689999999999998854321110    111


Q ss_pred             hhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCce-EEEecc
Q 035965          224 PITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQ-YICCVK  275 (348)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~-y~~~~~  275 (348)
                      .+..   ..+..         +.+.+++|+|+++.++++.....|. +++.+.
T Consensus       211 ~~~~---~~p~~---------~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG  251 (257)
T 3tpc_A          211 ALAA---SVPFP---------PRLGRAEEYAALVKHICENTMLNGEVIRLDGA  251 (257)
T ss_dssp             ---C---CSSSS---------CSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHh---cCCCC---------CCCCCHHHHHHHHHHHcccCCcCCcEEEECCC
Confidence            1111   11100         2377999999999999987655665 455443

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.93  E-value=8e-25  Score=193.06  Aligned_cols=228  Identities=16%  Similarity=0.122  Sum_probs=160.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGVF   84 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~Vi   84 (348)
                      +++|+|+||||+|+||++++++|+++|++|++++|+..+. .....  ...++.++.+|++|.+++.++++   ++|+||
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv   91 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAART--MAGQVEVRELDLQDLSSVRRFADGVSGADVLI   91 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT--SSSEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--hcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            4578999999999999999999999999999999987654 22211  12468999999999999998887   579999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      |+||......  ..+.++|  +..+++|+.++.++++++.... .++||++||...+.+.....   ....+..+.    
T Consensus        92 ~nAg~~~~~~--~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~---~~~~~~~~~----  159 (291)
T 3rd5_A           92 NNAGIMAVPY--ALTVDGF--ESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLE---DLNWRSRRY----  159 (291)
T ss_dssp             ECCCCCSCCC--CBCTTSC--BHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSS---CTTCSSSCC----
T ss_pred             ECCcCCCCcc--cCCHHHH--HHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCcc---cccccccCC----
Confidence            9999865432  2223333  5789999999999999998877 67999999987664433211   111111111    


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhC---C--CcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccc
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANEN---K--IDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVS  239 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (348)
                           .+...|+.||.+.+.+.+.++++.   +  +++..++||.|..+.........    ...+..    .+ .    
T Consensus       160 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~----~~~~~~----~~-~----  221 (291)
T 3rd5_A          160 -----SPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL----GDALMS----AA-T----  221 (291)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH----HHHHHH----HH-H----
Confidence                 245689999999999999988763   4  99999999999887543311111    010000    01 1    


Q ss_pred             cCCCCcceeeHHHHHHHHHHhhcCCCCCceEEE
Q 035965          240 NRMGSIALVHIEDICNAHIFLMENDRAQGQYIC  272 (348)
Q Consensus       240 ~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~  272 (348)
                          .|-..+++|+|+++++++..+...|.|+.
T Consensus       222 ----~~~~~~~~~~A~~~~~l~~~~~~~G~~~~  250 (291)
T 3rd5_A          222 ----RVVATDADFGARQTLYAASQDLPGDSFVG  250 (291)
T ss_dssp             -------CHHHHHHHHHHHHHHHSCCCTTCEEE
T ss_pred             ----HHHhCCHHHHHHHHHHHHcCCCCCCceeC
Confidence                11133699999999999988766776643

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.93  E-value=6.7e-25  Score=190.85  Aligned_cols=225  Identities=19%  Similarity=0.135  Sum_probs=157.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccc-cCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      ..+||+++||||+|+||++++++|+++|++|++++|+....  ..... .....++.++.+|++|.+++.++++      
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            34578999999999999999999999999999998875432  11111 1112468999999999999888775      


Q ss_pred             -CCCEEEEcccc--CccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCC
Q 035965           79 -GCDGVFHVAAS--MEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 -~~d~Vih~a~~--~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                       ++|+|||+||.  .......+.+.++|  ...+++|+.++.++++++    ++.+ ..+||++||.+.......     
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~-----  155 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEW--NEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPGW-----  155 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCCC-----
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHH--HHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCCC-----
Confidence             78999999994  22222223333333  578999999999999988    4444 679999999743211111     


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                                        .+...|+.+|.+.+.+.+.++.+   .++++..++||.|+++.....    .......... 
T Consensus       156 ------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~-  212 (264)
T 3i4f_A          156 ------------------IYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT----IQEARQLKEH-  212 (264)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC----HHHHHHC----
T ss_pred             ------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc----cHHHHHHHhh-
Confidence                              13467999999999999998877   689999999999999865432    1111111111 


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                        ..+          .+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       213 --~~p----------~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG  250 (264)
T 3i4f_A          213 --NTP----------IGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGA  250 (264)
T ss_dssp             -----------------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCS
T ss_pred             --cCC----------CCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCc
Confidence              111          1226799999999999998643  234 5666543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.93  E-value=4e-25  Score=190.32  Aligned_cols=222  Identities=16%  Similarity=0.073  Sum_probs=146.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEE-cCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATV-RDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~-r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+|+||||+|+||++++++|+++|++|++++ |++.+. .... +.....++.++.+|++|.+++.++++       
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4568999999999999999999999999999994 554432 1111 11123468899999999998887765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|+|||+||........+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+++.+         
T Consensus        83 ~~d~vi~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~---------  150 (247)
T 2hq1_A           83 RIDILVNNAGITRDTLMLKMSEKDW--DDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNA---------  150 (247)
T ss_dssp             CCCEEEECC---------------C--HHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC-----------------
T ss_pred             CCCEEEECCCCCCCCccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCC---------
Confidence            7999999999764332222222333  47899999999988888764    34 67999999986554321         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      +...|+.+|.+.|.+++.++.+.   ++++++++|+.+.++.... .+.   .........   
T Consensus       151 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~---~~~~~~~~~---  207 (247)
T 2hq1_A          151 ----------------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV-LPD---KVKEMYLNN---  207 (247)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCH---HHHHHHHTT---
T ss_pred             ----------------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-cch---HHHHHHHhh---
Confidence                            23579999999999999988764   7999999999998763221 111   011111111   


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--A-QGQYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  275 (348)
                      .          ..+.+++++|+|+++.+++..+.  . +..|++.+.
T Consensus       208 ~----------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          208 I----------PLKRFGTPEEVANVVGFLASDDSNYITGQVINIDGG  244 (247)
T ss_dssp             S----------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C----------CCCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence            0          12338899999999999887542  2 446777554

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=1.1e-24  Score=191.05  Aligned_cols=232  Identities=16%  Similarity=0.110  Sum_probs=161.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC-------------cc-cccc-ccCCCCCeEEEEccCCCcchH
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG-------------KL-QIFS-KWTRSDRLRLFQADLQVEGSF   73 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~-------------~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~   73 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..             +. .... ......++.++.+|++|.+++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            45789999999999999999999999999999998421             11 1111 112235788999999999988


Q ss_pred             HHhhc-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeee
Q 035965           74 DKAVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTIT  142 (348)
Q Consensus        74 ~~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~  142 (348)
                      .++++       ++|++||+||........+.+.++|  ...+++|+.++.++++++..    .+...+||++||...+.
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  170 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQW--DTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK  170 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc
Confidence            87765       6899999999876544334444444  57899999999999998753    22246899999987543


Q ss_pred             ecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHH
Q 035965          143 AKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQ  219 (348)
Q Consensus       143 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~  219 (348)
                      +.+                         ....|+.||.+.+.+.+.++.+   +++++..++||.|+++.....  ....
T Consensus       171 ~~~-------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~  223 (280)
T 3pgx_A          171 ATP-------------------------GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE--AMME  223 (280)
T ss_dssp             CCT-------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH--HHHH
T ss_pred             CCC-------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh--hhhh
Confidence            221                         3357999999999999999887   689999999999999864321  0111


Q ss_pred             HHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          220 VLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .+.... .....+......    ..| +++++|+|+++++++....  ..| .+++.+.
T Consensus       224 ~~~~~~-~~~~~~~~~~~~----~~r-~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  276 (280)
T 3pgx_A          224 IFARHP-SFVHSFPPMPVQ----PNG-FMTADEVADVVAWLAGDGSGTLTGTQIPVDKG  276 (280)
T ss_dssp             HHHHCG-GGGGGSCCBTTB----CSS-CBCHHHHHHHHHHHHSGGGTTCSSCEEEESTT
T ss_pred             hhhcCc-hhhhhhhhcccC----CCC-CCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            111000 000011101111    123 8899999999999987543  344 4566554

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.93  E-value=3.3e-24  Score=187.07  Aligned_cols=222  Identities=18%  Similarity=0.120  Sum_probs=162.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|+++||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       +
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--GRGAVHHVVDLTNEVSVRALIDFTIDTFGR   85 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCCeEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            34578999999999999999999999999999999987654 222111  2468899999999998888776       7


Q ss_pred             CCEEEEccccCcc-c-cccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           80 CDGVFHVAASMEF-D-INVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        80 ~d~Vih~a~~~~~-~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      +|++||+||.... . ...+.+.++|  ...+++|+.++.++++++    ++.+ .++||++||...+.+.+        
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~--------  154 (271)
T 3tzq_B           86 LDIVDNNAAHSDPADMLVTQMTVDVW--DDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAYD--------  154 (271)
T ss_dssp             CCEEEECCCCCCTTCCCGGGCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBCS--------
T ss_pred             CCEEEECCCCCCCCCCccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCCC--------
Confidence            9999999997633 2 1122333334  578999999999999998    4455 67999999987543221        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +...|+.||.+.+.+.+.++.+   +|+++..++||.|+++......+..   ........  
T Consensus       155 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~---~~~~~~~~--  212 (271)
T 3tzq_B          155 -----------------MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQP---IVDIFATH--  212 (271)
T ss_dssp             -----------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHH---HHHHHHTT--
T ss_pred             -----------------CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHH---HHHHHHhc--
Confidence                             3457999999999999999887   6899999999999998655222111   11111111  


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                       .+ .++         +..++|+|+++++++....  ..| .+++.+.
T Consensus       213 -~~-~~r---------~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          213 -HL-AGR---------IGEPHEIAELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             -ST-TSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CC-CCC---------CcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence             11 122         6689999999999987643  244 4666554

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.93  E-value=3.1e-25  Score=191.98  Aligned_cols=230  Identities=13%  Similarity=0.039  Sum_probs=162.6

Q ss_pred             CCCCCcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc
Q 035965            1 MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus         1 m~~~~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      |+......+++|++|||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++
T Consensus         2 m~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   81 (256)
T 3gaf_A            2 MSYESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIK   81 (256)
T ss_dssp             ----CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCcCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            444444566789999999999999999999999999999999976543 2111 11123578999999999998887765


Q ss_pred             -------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCC
Q 035965           79 -------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSS  147 (348)
Q Consensus        79 -------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~  147 (348)
                             ++|++||+||....... +.+.++|  ...+++|+.++.++++++..    .+ ..+||++||...+.+.+  
T Consensus        82 ~~~~~~g~id~lv~nAg~~~~~~~-~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--  155 (256)
T 3gaf_A           82 AALDQFGKITVLVNNAGGGGPKPF-DMPMSDF--EWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTNV--  155 (256)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCT-TCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCCT--
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCC-CCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCCC--
Confidence                   78999999997654332 3334444  57899999999999998753    33 57999999987543211  


Q ss_pred             CCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhh
Q 035965          148 GEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSP  224 (348)
Q Consensus       148 ~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  224 (348)
                                             +...|+.||.+.+.+.+.++.+   .++++..++||.|.++.......   ......
T Consensus       156 -----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~  209 (256)
T 3gaf_A          156 -----------------------RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLT---PEIERA  209 (256)
T ss_dssp             -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCC---HHHHHH
T ss_pred             -----------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccC---HHHHHH
Confidence                                   3457999999999999999877   47999999999998763211000   001111


Q ss_pred             hcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          225 ITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      +...   .          ..+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       210 ~~~~---~----------p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG  250 (256)
T 3gaf_A          210 MLKH---T----------PLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGG  250 (256)
T ss_dssp             HHTT---C----------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHhc---C----------CCCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCC
Confidence            1111   1          12337799999999999987543  234 5677544

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.93  E-value=3.4e-25  Score=191.49  Aligned_cols=224  Identities=15%  Similarity=0.112  Sum_probs=137.8

Q ss_pred             CcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc----
Q 035965            5 EESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         5 ~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      ..+.+++|++|||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++    
T Consensus         3 ~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            3 GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34556788999999999999999999999999999999986544 2211 11123568899999999998887765    


Q ss_pred             ---CCCEEEEccccCc---cccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCC
Q 035965           79 ---GCDGVFHVAASME---FDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSG  148 (348)
Q Consensus        79 ---~~d~Vih~a~~~~---~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  148 (348)
                         ++|+|||+||...   .......+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.      
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------  153 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYY--KKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWL------  153 (253)
T ss_dssp             HHSCCCEEEECCCCCCGGGGGCTTTSCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC-----------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccC------
Confidence               7999999999742   111112233333  5789999999776666654    344 57999999987541      


Q ss_pred             CCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhh
Q 035965          149 EWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPI  225 (348)
Q Consensus       149 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~  225 (348)
                                            +...|+.||.+.+.+++.++.+.   ++++..++|+.|+++......+..  ......
T Consensus       154 ----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~~~  209 (253)
T 3qiv_A          154 ----------------------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKE--MVDDIV  209 (253)
T ss_dssp             ----------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------------------
T ss_pred             ----------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHH--HHHHHh
Confidence                                  22359999999999999999885   799999999999998544321100  000111


Q ss_pred             cCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 035965          226 TGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCVK  275 (348)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~~  275 (348)
                      .    ..          ..+.+..++|+|+++++++.....   +..|++.+.
T Consensus       210 ~----~~----------~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG  248 (253)
T 3qiv_A          210 K----GL----------PLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGG  248 (253)
T ss_dssp             ------------------------CCHHHHHHHHHHSGGGTTCCSCEEEC---
T ss_pred             c----cC----------CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            1    11          122366899999999999875432   445666543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=2e-24  Score=186.12  Aligned_cols=210  Identities=19%  Similarity=0.171  Sum_probs=150.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      |++++|+||||+|+||++++++|+++|  ++|++++|+..+. .+...  ...++.++.+|++|.+++.++++       
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc--cCCceEEEEeecCCHHHHHHHHHHHHHhcC
Confidence            346899999999999999999999999  9999999987654 33222  23578999999999998887776       


Q ss_pred             --CCCEEEEccccCc-cccccccccccchhhhhhhhhHHHHHHHHHHHhhc----------CC----cceEEEeccceee
Q 035965           79 --GCDGVFHVAASME-FDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----------ES----VKRVVLTSSVSTI  141 (348)
Q Consensus        79 --~~d~Vih~a~~~~-~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----------~~----~~~~v~~SS~~~~  141 (348)
                        ++|+|||+||... .........++|  ...+++|+.++.++++++...          +.    .++||++||...+
T Consensus        79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  156 (250)
T 1yo6_A           79 SDGLSLLINNAGVLLSYGTNTEPNRAVI--AEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHH--HHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             CCCCcEEEECCcccCCCcccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence              7999999999765 322222223333  478999999999999887643          10    4789999998754


Q ss_pred             eecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchH
Q 035965          142 TAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSI  218 (348)
Q Consensus       142 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~  218 (348)
                      .+...         +..+         ..+...|+.+|.+.+.+++.++++.   +++++.+||+.|.++....      
T Consensus       157 ~~~~~---------~~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------  212 (250)
T 1yo6_A          157 ITDNT---------SGSA---------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------  212 (250)
T ss_dssp             STTCC---------STTS---------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------
T ss_pred             cCCcc---------cccc---------cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------
Confidence            43211         1111         0155689999999999999998875   8999999999987763210      


Q ss_pred             HHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEE
Q 035965          219 QVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYIC  272 (348)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~  272 (348)
                                         ..       +++++|+|++++.++....  ..|.|+.
T Consensus       213 -------------------~~-------~~~~~~~a~~~~~~~~~~~~~~~G~~~~  242 (250)
T 1yo6_A          213 -------------------NA-------ALTVEQSTAELISSFNKLDNSHNGRFFM  242 (250)
T ss_dssp             --------------------------------HHHHHHHHHHHTTCCGGGTTCEEE
T ss_pred             -------------------CC-------CCCHHHHHHHHHHHHhcccccCCCeEEE
Confidence                               01       6789999999999998764  3566643

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.93  E-value=1.2e-24  Score=191.55  Aligned_cols=222  Identities=20%  Similarity=0.146  Sum_probs=159.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCC-CCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRS-DRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~-~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+||||||+|+||++++++|+++|++|++++|+..+. .... +.... .++.++.+|++|.+++.++++       
T Consensus        39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            3568999999999999999999999999999999987654 2221 11111 478899999999988877654       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceee-eecCCCCCCCCc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTI-TAKDSSGEWRPV  153 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~-~~~~~~~~~~~~  153 (348)
                      ++|+|||+||........+.+.++|  ...+++|+.++.++++++.    +.+ ..+||++||.... .+.+        
T Consensus       119 ~iD~lvnnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~~--------  187 (293)
T 3rih_A          119 ALDVVCANAGIFPEARLDTMTPEQL--SEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGYP--------  187 (293)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBCT--------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCCC--------
Confidence            6899999999865544334444445  5789999999999999884    444 5799999997642 2111        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +...|+.||.+.+.+.+.++.+   .|+++..++||.|+++......+.   ........   
T Consensus       188 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~---~~~~~~~~---  244 (293)
T 3rih_A          188 -----------------GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEE---YISGMARS---  244 (293)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHH---HHHHHHTT---
T ss_pred             -----------------CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHH---HHHHHHhc---
Confidence                             3457999999999999998877   589999999999998743221111   11111111   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                       .+ .++         +..++|+|+++++++....  ..| .+++.+.
T Consensus       245 -~p-~~r---------~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  281 (293)
T 3rih_A          245 -IP-MGM---------LGSPVDIGHLAAFLATDEAGYITGQAIVVDGG  281 (293)
T ss_dssp             -ST-TSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CC-CCC---------CCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence             11 222         5589999999999987543  344 4566543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.93  E-value=2.6e-24  Score=192.07  Aligned_cols=241  Identities=17%  Similarity=0.118  Sum_probs=156.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---ccccc----cCCCCCeEEEEccCCCcchHHHhhc---
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSK----WTRSDRLRLFQADLQVEGSFDKAVM---   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~---   78 (348)
                      |++|++|||||+|+||++++++|+++|++|++++|+....   ....+    .....++.++.+|++|.+++.++++   
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999974211   11111    1123478999999999999888776   


Q ss_pred             ----CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCC
Q 035965           79 ----GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 ----~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                          ++|+|||+||..........+.++|  ...+++|+.|+.++++++    ++.+ .+++|++||...+.....    
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~~~----  155 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQF--AELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTPP----  155 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCCS----
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCCCC----
Confidence                7999999999765443333334444  578999999999999998    4445 679999999875422111    


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCC---CCchHHHHHhh
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSS---VPSSIQVLLSP  224 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~  224 (348)
                                          ....|+.||.+.|.+.+.++.+   .|+++++++||.|.++.....   .+.........
T Consensus       156 --------------------~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  215 (324)
T 3u9l_A          156 --------------------YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEY  215 (324)
T ss_dssp             --------------------SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHH
T ss_pred             --------------------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhh
Confidence                                2357999999999999999877   689999999999987643211   11111111111


Q ss_pred             hcCCCCccc--cccccccCCCCcceeeHHHHHHHHHHhhcCCCCC-c-eEEEeccCcC
Q 035965          225 ITGDSKFFS--ILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQ-G-QYICCVKSCP  278 (348)
Q Consensus       225 ~~~~~~~~~--~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~-~-~y~~~~~~~s  278 (348)
                      ........+  ......  ....+..+++|+|++++.+++.+... . .+.++.....
T Consensus       216 ~~~~~~~~~~~~~~~~~--~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~  271 (324)
T 3u9l_A          216 EAGPNAGLGEEIKKAFA--AIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDG  271 (324)
T ss_dssp             HHTTTTTHHHHHHHHHH--HTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCS
T ss_pred             ccccccCCHHHHHHHHH--HhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchH
Confidence            111000000  000000  00111358999999999999987432 2 3455544444

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.93  E-value=3.1e-25  Score=190.73  Aligned_cols=220  Identities=18%  Similarity=0.162  Sum_probs=152.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEE-EcCCCcc-cccc-ccCCCCCeEE-EEccCCCcchHHHhhc-------C
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHAT-VRDPGKL-QIFS-KWTRSDRLRL-FQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~-~r~~~~~-~~~~-~~~~~~~~~~-~~~Dl~d~~~~~~~~~-------~   79 (348)
                      ||+|+||||+|+||++++++|+++|++|+++ +|+..+. .... +.....++.+ +.+|++|.+++.++++       +
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999998 6765433 2111 1111235666 8999999998877754       7


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+||..........+.++|  ...+++|+.++.++++++    ++.+ .++||++||...+++.+          
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----------  147 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDW--EAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGNP----------  147 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCS----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHH--HHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCCC----------
Confidence            999999999764432222222333  478999999966655544    4445 68999999986554321          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.+|.+.+.+.+.++++.   +++++++||+.++++..... ....  .......    .
T Consensus       148 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~--~~~~~~~----~  205 (245)
T 2ph3_A          148 ---------------GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL-PQEV--KEAYLKQ----I  205 (245)
T ss_dssp             ---------------SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-CHHH--HHHHHHT----C
T ss_pred             ---------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc-CHHH--HHHHHhc----C
Confidence                           33579999999999999988764   89999999999998743221 1100  1111111    0


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--A-QGQYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  275 (348)
                                ..+.+++++|+|+++..++..+.  . +..|++.+.
T Consensus       206 ----------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  241 (245)
T 2ph3_A          206 ----------PAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGG  241 (245)
T ss_dssp             ----------TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ----------CCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence                      12338899999999999987643  2 445677654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.93  E-value=1.5e-24  Score=187.74  Aligned_cols=227  Identities=14%  Similarity=0.035  Sum_probs=160.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45678999999999999999999999999999999987644 2221 11223578999999999998887765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|++||+||........+.+.++|  ...+++|+.++.++++++..    .+...+||++||...+.+.+         
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~--~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  151 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGW--NSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP---------  151 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT---------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC---------
Confidence            6899999999765444334444445  57899999999999998842    22257999999987543221         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                      ....|+.||.+.+.+.+.++.+    +|+++..++||.|.++....... ....+......   
T Consensus       152 ----------------~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~-~~~~~~~~~~~---  211 (257)
T 3imf_A          152 ----------------GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLW-ISEEMAKRTIQ---  211 (257)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CCSHHHHT---
T ss_pred             ----------------CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcc-cCHHHHHHHHh---
Confidence                            3357999999999999988754    48999999999999885432100 00000000000   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .+          ..+.+..++|+|+++++++....  ..| .+++.+.
T Consensus       212 ~~----------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  249 (257)
T 3imf_A          212 SV----------PLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGG  249 (257)
T ss_dssp             TS----------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cC----------CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            01          12237799999999999987643  244 4566543

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.92  E-value=7.4e-25  Score=191.25  Aligned_cols=225  Identities=15%  Similarity=0.058  Sum_probs=160.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc------CC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM------GC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~   80 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|..... ....+.....++.++.+|++|.+++.++.+      ++
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i  107 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV  107 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence            45678999999999999999999999999999999764322 111122233568899999999988876643      69


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||........+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+.+           
T Consensus       108 D~lv~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~-----------  173 (273)
T 3uf0_A          108 DVLVNNAGIIARAPAEEVSLGRW--REVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGR-----------  173 (273)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCS-----------
T ss_pred             cEEEECCCCCCCCCchhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCCC-----------
Confidence            99999999876544334444555  57899999999999998743    34 57999999987543221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.||.+.+.+.+.++.+   .|+++..++||.|.++....... ...........    . 
T Consensus       174 --------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~----~-  233 (273)
T 3uf0_A          174 --------------NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRA-DDERAAEITAR----I-  233 (273)
T ss_dssp             --------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT-SHHHHHHHHHH----S-
T ss_pred             --------------CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhccc-CHHHHHHHHhc----C-
Confidence                          3357999999999999999887   68999999999999874321000 00000011000    1 


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                               ..+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       234 ---------p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG  269 (273)
T 3uf0_A          234 ---------PAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGG  269 (273)
T ss_dssp             ---------TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---------CCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence                     12237799999999999987643  344 4566543

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.92  E-value=5.6e-25  Score=190.32  Aligned_cols=232  Identities=15%  Similarity=0.104  Sum_probs=157.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..+.....+.....++.++.+|++|.+++.++++       ++|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4568999999999999999999999999999999976522111111122468889999999999888876       799


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+||........+.+.++|  ...+++|+.++.++++++    ++.+ .++||++||...+.+.+            
T Consensus        82 ~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------------  146 (255)
T 2q2v_A           82 ILVNNAGIQHVAPVEQFPLESW--DKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGST------------  146 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT------------
T ss_pred             EEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCCC------------
Confidence            9999999764433223333334  578999999887777765    4455 68999999987543211            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   +...|+.+|.+.+.+.+.++.+   .+++++.++|+.|+++....    ....... . +.. ....
T Consensus       147 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~-~-~~~-~~~~  206 (255)
T 2q2v_A          147 -------------GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQK----QIDDRAA-N-GGD-PLQA  206 (255)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHH----HHHHHHH-H-TCC-HHHH
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhh----hcccccc-c-ccc-hHHH
Confidence                         3357999999999999999887   47999999999999874221    0000000 0 000 0000


Q ss_pred             cccc-ccCCCCcceeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 035965          235 LSSV-SNRMGSIALVHIEDICNAHIFLMENDR--A-QGQYICCVK  275 (348)
Q Consensus       235 ~~~~-~~~~~~r~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  275 (348)
                      .... ......+.+++++|+|+++++++..+.  . +..|++.+.
T Consensus       207 ~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          207 QHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             HHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence            0000 001123348899999999999987643  2 345666543

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.92  E-value=1e-24  Score=191.18  Aligned_cols=234  Identities=16%  Similarity=0.171  Sum_probs=157.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccC-CCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWT-RSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..+.  .... +.. ...++.++.+|++|.+++.++++      
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            4568999999999999999999999999999999954322  1111 111 13478899999999998887765      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       ++|+|||+||........+.+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+.+        
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  171 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQW--DRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVASP--------  171 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT--------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCCC--------
Confidence             6899999999865544334444444  5789999999999999874    334 57899999987543221        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       ....|+.||.+.+.+.+.++.+   .++++..++||.|.++......+.... . ....... 
T Consensus       172 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~-~-~~~~~~~-  231 (281)
T 3v2h_A          172 -----------------FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQAR-T-RGITEEQ-  231 (281)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----------------------
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhh-h-cCCCHHH-
Confidence                             3357999999999999999877   479999999999999864432111000 0 0000000 


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ...  .....+...+.+++++|+|+++++++....  ..| .+++.+.
T Consensus       232 ~~~--~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG  277 (281)
T 3v2h_A          232 VIN--EVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGG  277 (281)
T ss_dssp             ----------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTT
T ss_pred             HHH--HHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCC
Confidence            000  001112245669999999999999987653  344 4566543

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.92  E-value=5.7e-25  Score=190.85  Aligned_cols=228  Identities=16%  Similarity=0.100  Sum_probs=159.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..+. ... .+.....++.++.+|++|.+++.++++       
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35578999999999999999999999999999999986543 211 111123468889999999988877765       


Q ss_pred             CCCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 GCDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 ~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      ++|+|||+||.... ....+.+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+.+        
T Consensus        91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  159 (260)
T 2zat_A           91 GVDILVSNAAVNPFFGNIIDATEEVW--DKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPFP--------  159 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT--------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCCC--------
Confidence            79999999997532 11112223333  4789999999999998875    344 67999999987543211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +...|+.+|.+.+.+.+.++.+.   +++++.++|+.+.++........  ......      
T Consensus       160 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~------  214 (260)
T 2zat_A          160 -----------------NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD--KARKEY------  214 (260)
T ss_dssp             -----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS--HHHHHH------
T ss_pred             -----------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC--hHHHHH------
Confidence                             34579999999999999988763   89999999999988742210000  000000      


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEecc-CcC
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR---AQGQYICCVK-SCP  278 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~~~-~~s  278 (348)
                       +   ..   ....+.+++++|+|+++.+++..+.   .+..+++.+. ..|
T Consensus       215 -~---~~---~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          215 -M---KE---SLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             -H---HH---HHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             -H---Hh---cCCCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence             0   00   0023348899999999999987643   2445777543 443

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.92  E-value=1.8e-24  Score=187.66  Aligned_cols=216  Identities=13%  Similarity=0.123  Sum_probs=157.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+..+. ......  ...+.++.+|++|.+++.++++       +
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   81 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL--ADAARYVHLDVTQPAQWKAAVDTAVTAFGG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--hcCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999986543 221111  1247889999999999888776       7


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+||........+.+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+.+          
T Consensus        82 iD~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  148 (260)
T 1nff_A           82 LHVLVNNAGILNIGTIEDYALTEW--QRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTV----------  148 (260)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCCC----------
Confidence            999999999765433223333334  5789999999977666654    344 67999999987543211          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.||.+.+.+.+.++.+   .+++++++||+.|+++....  ..      ...    ...
T Consensus       149 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~------~~~----~~~  201 (260)
T 1nff_A          149 ---------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW--VP------EDI----FQT  201 (260)
T ss_dssp             ---------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT--SC------TTC----SCC
T ss_pred             ---------------CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc--ch------hhH----HhC
Confidence                           3357999999999999998876   58999999999999985321  00      000    001


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--A-QGQYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  275 (348)
                      +          .+.+++++|+|+++++++....  . +..|++.+.
T Consensus       202 ~----------~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG  237 (260)
T 1nff_A          202 A----------LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG  237 (260)
T ss_dssp             S----------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c----------cCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            1          2237899999999999987543  2 345666544

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.92  E-value=2.4e-24  Score=188.25  Aligned_cols=225  Identities=14%  Similarity=0.080  Sum_probs=162.6

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG  108 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45678999999999999999999999999999999987654 2221 11223478899999999999888776       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|++||+||........+.+.++|  ...+++|+.++.++++++...    +...+||++||...+.....        
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~--------  178 (276)
T 3r1i_A          109 GIDIAVCNAGIVSVQAMLDMPLEEF--QRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP--------  178 (276)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS--------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC--------
Confidence            7999999999876554444444545  578899999999999987643    21368999999764432111        


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                     .+...|+.||.+.+.+.+.++.+   .++++..++||.|..+..... ....    ..+..   .
T Consensus       179 ---------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~----~~~~~---~  235 (276)
T 3r1i_A          179 ---------------QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL-ADYH----ALWEP---K  235 (276)
T ss_dssp             ---------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG-GGGH----HHHGG---G
T ss_pred             ---------------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc-hHHH----HHHHh---c
Confidence                           13457999999999999999887   589999999999988754321 1111    11110   1


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .+          .+-+..++|+|+++++++....  ..| .+++.+.
T Consensus       236 ~p----------~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  272 (276)
T 3r1i_A          236 IP----------LGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGG  272 (276)
T ss_dssp             ST----------TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC----------CCCCcCHHHHHHHHHHHcCccccCccCcEEEECcC
Confidence            11          1226789999999999987543  344 4566543

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.92  E-value=2e-24  Score=189.14  Aligned_cols=230  Identities=16%  Similarity=0.155  Sum_probs=155.4

Q ss_pred             CCCCCcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc-CCCcc-cccccc-CC-CCCeEEEEccCCCc----ch
Q 035965            1 MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVR-DPGKL-QIFSKW-TR-SDRLRLFQADLQVE----GS   72 (348)
Q Consensus         1 m~~~~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r-~~~~~-~~~~~~-~~-~~~~~~~~~Dl~d~----~~   72 (348)
                      |.......+++|++|||||+|+||++++++|+++|++|++++| +..+. ...... .. ..++.++.+|++|.    ++
T Consensus         1 m~~~~~~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   80 (276)
T 1mxh_A            1 MNETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDC   80 (276)
T ss_dssp             ----------CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHH
T ss_pred             CcchhhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHH
Confidence            4444444466789999999999999999999999999999999 65432 211110 00 24688999999999    88


Q ss_pred             HHHhhc-------CCCEEEEccccCcccccccccc-----------ccchhhhhhhhhHHHHHHHHHHHhhcC--Cc---
Q 035965           73 FDKAVM-------GCDGVFHVAASMEFDINVKDNI-----------ETYVQSTVINPAIQSTLNLLKACLKSE--SV---  129 (348)
Q Consensus        73 ~~~~~~-------~~d~Vih~a~~~~~~~~~~~~~-----------~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~---  129 (348)
                      +.++++       ++|+|||+||..........+.           ++|  ...+++|+.++.++++++...-  ..   
T Consensus        81 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~~  158 (276)
T 1mxh_A           81 CEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQV--AELFGSNAVAPLFLIRAFARRQGEGGAWR  158 (276)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHH--HHHHHHHTHHHHHHHHHHHHTC-------
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHH--HHHHHhccHHHHHHHHHHHHHHhcCCCCC
Confidence            877665       6899999999764432222222           333  5789999999999999988741  13   


Q ss_pred             ---ceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecC
Q 035965          130 ---KRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITT  203 (348)
Q Consensus       130 ---~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~  203 (348)
                         ++||++||...+.+.+                         +...|+.||.+.+.+.+.++.+.   +++++.++|+
T Consensus       159 ~~~g~iv~isS~~~~~~~~-------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG  213 (276)
T 1mxh_A          159 SRNLSVVNLCDAMTDLPLP-------------------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPG  213 (276)
T ss_dssp             CCCEEEEEECCGGGGSCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             CCCcEEEEECchhhcCCCC-------------------------CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence               7999999987543211                         33579999999999999988764   8999999999


Q ss_pred             ccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          204 TVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       204 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .|+++ ..  ....   ....+...   .+         ..|++++++|+|+++++++....  ..| .+++.+.
T Consensus       214 ~v~t~-~~--~~~~---~~~~~~~~---~p---------~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  270 (276)
T 1mxh_A          214 LSLLP-PA--MPQE---TQEEYRRK---VP---------LGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  270 (276)
T ss_dssp             SBSCC-SS--SCHH---HHHHHHTT---CT---------TTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccCC-cc--CCHH---HHHHHHhc---CC---------CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence            99998 21  1111   11111111   11         11337799999999999987543  234 4566544

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.92  E-value=2.5e-24  Score=185.41  Aligned_cols=224  Identities=18%  Similarity=0.142  Sum_probs=161.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+++|+++||||+|+||++++++|+++|++|++++|+..+. .... ......++.++.+|++|.+++.++++       
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35578999999999999999999999999999999986543 2211 11123478999999999998887764       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      ++|+|||+||........+.+.++|  ...+++|+.++.++++++...   ....+||++||...+.+.+          
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  149 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEW--QSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP----------  149 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT----------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC----------
Confidence            5799999999865543333333444  578999999999999987542   1246999999987554321          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.||.+.+.+.+.++++   .++++..++|+.|.++......+.    ........    
T Consensus       150 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~----  206 (247)
T 3lyl_A          150 ---------------GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDE----QKSFIATK----  206 (247)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHH----HHHHHHTT----
T ss_pred             ---------------CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHH----HHHHHhhc----
Confidence                           3357999999999999998876   479999999999998765432111    11111111    


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                               ...+.+.+++|+|+++.+++....  ..| .+++.+.
T Consensus       207 ---------~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG  243 (247)
T 3lyl_A          207 ---------IPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGG  243 (247)
T ss_dssp             ---------STTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---------CCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCC
Confidence                     123347899999999999987543  234 5666543

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=1.3e-24  Score=186.43  Aligned_cols=213  Identities=19%  Similarity=0.122  Sum_probs=155.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc------CCCEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM------GCDGV   83 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~V   83 (348)
                      |+|+||||||+|+||++++++|+++|++|++++|+.. .         +.+.++.+|++|.+++.++++      ++|+|
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            3579999999999999999999999999999999764 1         256889999999999988876      78999


Q ss_pred             EEccccCccccccccccc----cchhhhhhhhhHHHHHHHHHHHhhcC---------CcceEEEeccceeeeecCCCCCC
Q 035965           84 FHVAASMEFDINVKDNIE----TYVQSTVINPAIQSTLNLLKACLKSE---------SVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~----~~~~~~~~~~nv~~~~~ll~~~~~~~---------~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                      ||+|+............+    +|  ...+++|+.++.++++++...-         ..++||++||...+.+..     
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----  143 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESF--RRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-----  143 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-----
T ss_pred             EEcccccCcccccccccccchHHH--HHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-----
Confidence            999997654332221111    33  4788999999999999887531         123999999987554221     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          +...|+.+|.+.|.+++.++.+   .+++++++||+.|+++.......    .+...+..
T Consensus       144 --------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~~~  199 (242)
T 1uay_A          144 --------------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE----KAKASLAA  199 (242)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH----HHHHHHHT
T ss_pred             --------------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccch----hHHHHHHh
Confidence                                3457999999999999988776   38999999999999985432111    11111111


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQG-QYICCVK  275 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~~  275 (348)
                      . .++  .         +.+++++|+|+++++++.+....| .|++.+.
T Consensus       200 ~-~~~--~---------~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG  236 (242)
T 1uay_A          200 Q-VPF--P---------PRLGRPEEYAALVLHILENPMLNGEVVRLDGA  236 (242)
T ss_dssp             T-CCS--S---------CSCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             h-CCC--c---------ccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCC
Confidence            1 111  0         227799999999999998754445 5666543

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.92  E-value=1.1e-24  Score=190.95  Aligned_cols=241  Identities=19%  Similarity=0.145  Sum_probs=161.2

Q ss_pred             CCCCCcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC------------cc-ccc-cccCCCCCeEEEEcc
Q 035965            1 MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG------------KL-QIF-SKWTRSDRLRLFQAD   66 (348)
Q Consensus         1 m~~~~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~------------~~-~~~-~~~~~~~~~~~~~~D   66 (348)
                      |+......+++|++|||||+|+||++++++|+++|++|++++|+..            +. ... .......++.++.+|
T Consensus         3 m~~~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   82 (278)
T 3sx2_A            3 MPRSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQAD   82 (278)
T ss_dssp             ------CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             CCCCCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCC
Confidence            4444445667899999999999999999999999999999998732            11 000 011123578999999


Q ss_pred             CCCcchHHHhhc-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEe
Q 035965           67 LQVEGSFDKAVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLT  135 (348)
Q Consensus        67 l~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~  135 (348)
                      ++|.+++.++++       ++|++||+||......    ..++|  ...+++|+.++.++++++...    +...+||++
T Consensus        83 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~i  156 (278)
T 3sx2_A           83 VRDRESLSAALQAGLDELGRLDIVVANAGIAPMSA----GDDGW--HDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLI  156 (278)
T ss_dssp             TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS----THHHH--HHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            999999888775       7999999999765433    12333  588999999999999987542    224689999


Q ss_pred             ccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCC
Q 035965          136 SSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTS  212 (348)
Q Consensus       136 SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~  212 (348)
                      ||...+.+....          .           ++...|+.||.+.+.+.+.++.+.   ++++..++||.|.++....
T Consensus       157 sS~~~~~~~~~~----------~-----------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  215 (278)
T 3sx2_A          157 SSSAGLAGVGSA----------D-----------PGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN  215 (278)
T ss_dssp             CCGGGTSCCCCS----------S-----------HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             ccHHhcCCCccC----------C-----------CCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh
Confidence            998755432110          0           134579999999999999988763   6999999999999986542


Q ss_pred             CCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          213 SVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .  .....+........ .....+.   ... +.+++++|+|+++++++....  ..| .+++.+.
T Consensus       216 ~--~~~~~~~~~~~~~~-~~~~~~~---~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  274 (278)
T 3sx2_A          216 E--FTREWLAKMAAATD-TPGAMGN---AMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAG  274 (278)
T ss_dssp             H--HHHHHHHHHHHHCC---CTTSC---SSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             h--hHHHHHhhccchhh-hhhhhhh---hcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCC
Confidence            1  00111111110000 0000111   112 458899999999999987543  344 4566443

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.92  E-value=1.4e-24  Score=187.39  Aligned_cols=224  Identities=15%  Similarity=0.109  Sum_probs=156.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+..+. ..........++.++.+|++|.+++.++++       .
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            35678999999999999999999999999999999976543 221111111478999999999998887765       4


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCc-ceEEEeccceeeeecCCCCCCCCcc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESV-KRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +|+|||+|+..........+.++|  ...+++|+.++..+++.+.    +.+ . ++||++||...+.+.+         
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~---------  150 (251)
T 1zk4_A           83 VSTLVNNAGIAVNKSVEETTTAEW--RKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGDP---------  150 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSCCT---------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHH--HHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccCCC---------
Confidence            899999999764433223333333  4789999998877766654    444 4 7999999987543211         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHH-----hCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFAN-----ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                      +...|+.+|.+.|.+++.++.     ..+++++++||+.++++..... +..  ........  
T Consensus       151 ----------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~--~~~~~~~~--  209 (251)
T 1zk4_A          151 ----------------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PGA--EEAMSQRT--  209 (251)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TTH--HHHHTSTT--
T ss_pred             ----------------CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-Cch--hhhHHHhh--
Confidence                            345799999999999988775     4589999999999998753221 100  01110100  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                       ..          ..+.+++++|+|+++++++....  ..| .+++.+.
T Consensus       210 -~~----------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  247 (251)
T 1zk4_A          210 -KT----------PMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             -TC----------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -cC----------CCCCCcCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence             01          12338899999999999987643  234 5666543

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.92  E-value=2.6e-24  Score=185.49  Aligned_cols=223  Identities=17%  Similarity=0.139  Sum_probs=152.2

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc---CCCE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDG   82 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~   82 (348)
                      ....+++||||||+|+||+++++.|+++|++|++++|+..+. .....  ...++.++.+|++|.+++.++++   ++|+
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~   87 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA--LKDNYTIEVCNLANKEECSNLISKTSNLDI   87 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--HCSSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH--hccCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            345678999999999999999999999999999999976544 22211  12468899999999999988876   6899


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      |||+||............++|  ...+++|+.++.++++++...   ...++||++||...+.+.+              
T Consensus        88 li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------  151 (249)
T 3f9i_A           88 LVCNAGITSDTLAIRMKDQDF--DKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNP--------------  151 (249)
T ss_dssp             EEECCC-------------CH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCS--------------
T ss_pred             EEECCCCCCCCccccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCC--------------
Confidence            999999765433223333333  588999999999998887532   1257999999987554321              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                 +...|+.||.+.+.+.+.++.+   .++++..++||.|.++......+....   ....          
T Consensus       152 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~~----------  207 (249)
T 3f9i_A          152 -----------GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQRE---AIVQ----------  207 (249)
T ss_dssp             -----------CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHH---HHHH----------
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHH---HHHh----------
Confidence                       3357999999999999998876   579999999999988754432111111   1100          


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDRA--QG-QYICCVK  275 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  275 (348)
                          ....+.+.+++|+|+++.+++.....  .| .+++.+.
T Consensus       208 ----~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG  245 (249)
T 3f9i_A          208 ----KIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGG  245 (249)
T ss_dssp             ----HCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----cCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence                01234488999999999999986532  34 5666554

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.92  E-value=1.8e-24  Score=190.16  Aligned_cols=223  Identities=15%  Similarity=0.147  Sum_probs=155.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+++|+|+||||+|+||+++++.|+++|++|++++|+..+. ... .+.....++.++.+|++|.+++.++++       
T Consensus        41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK  120 (285)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            34568999999999999999999999999999988875433 211 111123468899999999998887763       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|+|||+||........+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+.+         
T Consensus       121 ~id~li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---------  188 (285)
T 2c07_A          121 NVDILVNNAGITRDNLFLRMKNDEW--EDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNV---------  188 (285)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHH--HHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT---------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCC---------
Confidence            6899999999765433223333333  57899999998888887753    34 57999999987554321         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      +...|+.+|.+.|.+++.++++   .+++++++||+.+.++..... ..   .+.......   
T Consensus       189 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~---~~~~~~~~~---  245 (285)
T 2c07_A          189 ----------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI-SE---QIKKNIISN---  245 (285)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C-CH---HHHHHHHTT---
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc-CH---HHHHHHHhh---
Confidence                            2357999999999999998876   389999999999998854321 11   111111110   


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .+          .+.+++++|+|+++++++..+.  ..| .+++.+.
T Consensus       246 ~~----------~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG  282 (285)
T 2c07_A          246 IP----------AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG  282 (285)
T ss_dssp             CT----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC----------CCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCC
Confidence            11          1227899999999999987643  234 4566543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.92  E-value=4.3e-24  Score=187.45  Aligned_cols=235  Identities=17%  Similarity=0.137  Sum_probs=162.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-------------ccc-cccCCCCCeEEEEccCCCcchHH
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-------------QIF-SKWTRSDRLRLFQADLQVEGSFD   74 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-------------~~~-~~~~~~~~~~~~~~Dl~d~~~~~   74 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+....             ... .......++.++.+|++|.+++.
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            4578999999999999999999999999999999974310             000 01112357889999999999888


Q ss_pred             Hhhc-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeee
Q 035965           75 KAVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITA  143 (348)
Q Consensus        75 ~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~  143 (348)
                      ++++       ++|++||+||........+.+.++|  ...+++|+.++.++++++..    .+ ..+||++||...+.+
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~  164 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQW--DEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHSA  164 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSC
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcCC
Confidence            7765       7999999999865544334444445  57899999999999998643    34 579999999875432


Q ss_pred             cCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHH
Q 035965          144 KDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQV  220 (348)
Q Consensus       144 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~  220 (348)
                      ..                         +...|+.||.+.+.+.+.++.+   +|+++..++||.|+++......  ....
T Consensus       165 ~~-------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~  217 (281)
T 3s55_A          165 NF-------------------------AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDF--VFGT  217 (281)
T ss_dssp             CT-------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHH--HHHC
T ss_pred             CC-------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchh--hhcc
Confidence            21                         3457999999999999999887   4799999999999998654210  0000


Q ss_pred             HHhhhcCCC-Cccc-cccccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 035965          221 LLSPITGDS-KFFS-ILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QG-QYICCVK  275 (348)
Q Consensus       221 ~~~~~~~~~-~~~~-~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  275 (348)
                      +........ .... ....  ...+.+.+++++|+|+++++++.....  .| .+++.+.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG  275 (281)
T 3s55_A          218 MRPDLEKPTLKDVESVFAS--LHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG  275 (281)
T ss_dssp             -------CCHHHHHHHHHH--HCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccccccccchhHHHHHHHh--hhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence            000000000 0000 0000  011235689999999999999986532  34 5666544

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.92  E-value=1.8e-24  Score=188.00  Aligned_cols=230  Identities=16%  Similarity=0.068  Sum_probs=158.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       ++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL--ENGGFAVEVDVTKRASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC--TTCCEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--hcCCeEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999999986543 221111  1267889999999999888776       79


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||........+.+.++|  ...+++|+.++.++++++...    +..++||++||...+.+.+           
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  154 (263)
T 3ak4_A           88 DLLCANAGVSTMRPAVDITDEEW--DFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAP-----------  154 (263)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT-----------
T ss_pred             CEEEECCCcCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCC-----------
Confidence            99999999765433223333344  578999999999999988653    2147999999976432211           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC--CCc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD--SKF  231 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~  231 (348)
                                    +...|+.||.+.+.+.+.++.+   .+++++++||+.|+++....    ........ .+.  ...
T Consensus       155 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~-~~~~~~~~  215 (263)
T 3ak4_A          155 --------------LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQER----EIIWEAEL-RGMTPEAV  215 (263)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHH----HHHHHHHH-HTSCHHHH
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhh----hccccccc-cccCcHHH
Confidence                          3357999999999999998876   38999999999999874211    00000000 000  000


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .....   .....+.+++++|+|+++++++..+.  ..| .|++.+.
T Consensus       216 ~~~~~---~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  259 (263)
T 3ak4_A          216 RAEYV---SLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG  259 (263)
T ss_dssp             HHHHH---HTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHHH---hcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcC
Confidence            00000   00123348899999999999987642  234 5666543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.92  E-value=1e-23  Score=185.03  Aligned_cols=231  Identities=16%  Similarity=0.075  Sum_probs=159.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++++|||||+|+||+++++.|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       ++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            457899999999999999999999999999999986543 2211 12233578899999999988877765       69


Q ss_pred             CEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           81 DGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        81 d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      |++||+||.... ....+.+.++|  ...+++|+.++.++++++    ++.+ .++||++||...+.....         
T Consensus       107 D~lVnnAg~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~---------  174 (283)
T 3v8b_A          107 DIVVANAGINGVWAPIDDLKPFEW--DETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFTT---------  174 (283)
T ss_dssp             CEEEECCCCCCCBCCTTTSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCS---------
T ss_pred             CEEEECCCCCCCCCchhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCCC---------
Confidence            999999997543 22223333444  578999999999999988    3444 579999999764321111         


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                    ++...|+.||.+.+.+.+.++.+   .++++..++||.|..+........................
T Consensus       175 --------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T 3v8b_A          175 --------------PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQV  240 (283)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSC
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcC
Confidence                          13457999999999999999887   4799999999999887644321110000000000000111


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                      + .       ...-+..++|+|+++++++....  ..|. +++.+
T Consensus       241 p-~-------~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  277 (283)
T 3v8b_A          241 P-I-------TDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDG  277 (283)
T ss_dssp             G-G-------GTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             c-c-------ccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECc
Confidence            1 1       00226689999999999987543  3454 45544

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.92  E-value=5.4e-24  Score=185.18  Aligned_cols=223  Identities=14%  Similarity=0.112  Sum_probs=158.2

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +.+++|+|+||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL--GNNCVFAPADVTSEKDVQTALALAKGKFG   85 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            445678999999999999999999999999999999987654 222111  2468999999999998888776       


Q ss_pred             CCCEEEEccccCccccccc------cccccchhhhhhhhhHHHHHHHHHHHhhc----------CCcceEEEeccceeee
Q 035965           79 GCDGVFHVAASMEFDINVK------DNIETYVQSTVINPAIQSTLNLLKACLKS----------ESVKRVVLTSSVSTIT  142 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----------~~~~~~v~~SS~~~~~  142 (348)
                      ++|+|||+||.........      ...++|  ...+++|+.++.++++++...          + .++||++||...+.
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~  162 (265)
T 2o23_A           86 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDF--QRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAFE  162 (265)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHH
T ss_pred             CCCEEEECCccCCCCccccccccCCCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhhcC
Confidence            7999999999764432111      222333  478999999999999988754          3 57899999987543


Q ss_pred             ecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHH
Q 035965          143 AKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQ  219 (348)
Q Consensus       143 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~  219 (348)
                      +.+                         +...|+.+|.+.+.+.+.++.+   .++++++++|+.+.++........   
T Consensus       163 ~~~-------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---  214 (265)
T 2o23_A          163 GQV-------------------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK---  214 (265)
T ss_dssp             CCT-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------
T ss_pred             CCC-------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHH---
Confidence            211                         3457999999999999988776   489999999999988753321000   


Q ss_pred             HHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCce-EEEecc
Q 035965          220 VLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQ-YICCVK  275 (348)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~-y~~~~~  275 (348)
                       ....+..   .++ .        .+.+++++|+|+++++++++....|. +.+.+.
T Consensus       215 -~~~~~~~---~~~-~--------~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG  258 (265)
T 2o23_A          215 -VCNFLAS---QVP-F--------PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGA  258 (265)
T ss_dssp             ---CHHHH---TCS-S--------SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             -HHHHHHH---cCC-C--------cCCCCCHHHHHHHHHHHhhcCccCceEEEECCC
Confidence             0000000   011 0        02277999999999999987655554 555443

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.92  E-value=4e-24  Score=183.76  Aligned_cols=201  Identities=15%  Similarity=0.140  Sum_probs=151.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-------eEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc---
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-------IVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM---   78 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-------~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~---   78 (348)
                      +|+|+||||+|+||++++++|+++|+       +|++++|+..+. .... +.....++.++.+|++|.+++.++++   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999       999999976543 2211 11123468899999999998887765   


Q ss_pred             ----CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCC
Q 035965           79 ----GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 ----~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                          ++|+|||+||..........+.++|  ...+++|+.++.++++++..    .+ .++||++||..++.+.+     
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-----  153 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDF--DYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFR-----  153 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-----
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCCC-----
Confidence                6999999999765433222333333  57899999999999998854    34 57999999987543211     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          +...|+.+|.+.|.+++.++.+   .+++++++||+.|+++..... .           .
T Consensus       154 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~-----------~  201 (244)
T 2bd0_A          154 --------------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-D-----------D  201 (244)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-C-----------S
T ss_pred             --------------------CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc-c-----------c
Confidence                                3457999999999999887754   589999999999999864321 0           0


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                       ..             ...+++++|+|++++.++..+.
T Consensus       202 -~~-------------~~~~~~~~dva~~~~~l~~~~~  225 (244)
T 2bd0_A          202 -EM-------------QALMMMPEDIAAPVVQAYLQPS  225 (244)
T ss_dssp             -TT-------------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             -cc-------------cccCCCHHHHHHHHHHHHhCCc
Confidence             00             0138899999999999998754

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=2.4e-24  Score=191.20  Aligned_cols=227  Identities=17%  Similarity=0.070  Sum_probs=157.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-cc-----CCCCCeEEEEccCCCcchHHHhhc--
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KW-----TRSDRLRLFQADLQVEGSFDKAVM--   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~-----~~~~~~~~~~~Dl~d~~~~~~~~~--   78 (348)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+..+. .... +.     ....++.++.+|++|.+++.++++  
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            45578999999999999999999999999999999986533 1111 00     013478999999999998887765  


Q ss_pred             -----CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCC
Q 035965           79 -----GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 -----~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                           ++|+|||+||............++|  ...+++|+.++.++++++...   ...++||++||.. +.+.+     
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~-----  166 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGW--HAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFP-----  166 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCT-----
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCC-----
Confidence                 4899999999654332222222333  478999999999999997652   1147899999976 32111     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          ....|+.+|.+.+.+.+.++++.   +++++++||+.|+|+...........   .....
T Consensus       167 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~  223 (303)
T 1yxm_A          167 --------------------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQ---SFFEG  223 (303)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGG---GGGTT
T ss_pred             --------------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccch---HHHHH
Confidence                                23479999999999999998875   89999999999999842111111000   00000


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .....          ..+.+++++|+|+++++++....  ..| .+++.+.
T Consensus       224 ~~~~~----------p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG  264 (303)
T 1yxm_A          224 SFQKI----------PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG  264 (303)
T ss_dssp             GGGGS----------TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHhcC----------cccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence            00001          12237899999999999987543  344 4666544

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.92  E-value=1.5e-24  Score=189.38  Aligned_cols=223  Identities=12%  Similarity=0.110  Sum_probs=151.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc-CCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVR-DPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r-~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      ++++||||||+|+||++++++|+++|++|+++.+ +.... .... ......++.++.+|++|.+++.++++       +
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            3578999999999999999999999999988754 43322 1111 11123478899999999998887765       6


Q ss_pred             CCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhc------CCcceEEEeccceeeeecCCCCCCCC
Q 035965           80 CDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS------ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        80 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      +|+|||+||.... ....+.+.++|  ...+++|+.++.++++++...      +..++||++||...+.+...      
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------  176 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERI--ERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT------  176 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC------
Confidence            8999999997654 22222233334  578999999999999887643      12568999999876553322      


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        ....|+.||.+.+.+++.++++.   ++++..++||.|.++......   .........   
T Consensus       177 ------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~---  232 (272)
T 4e3z_A          177 ------------------QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG---LPDRAREMA---  232 (272)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------------
T ss_pred             ------------------CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC---ChHHHHHHh---
Confidence                              23469999999999999988774   899999999999988543210   000000000   


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--C-CceEEEec
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--A-QGQYICCV  274 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~  274 (348)
                      ...          ....+.+++|+|+++++++....  . +..|++.+
T Consensus       233 ~~~----------~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdg  270 (272)
T 4e3z_A          233 PSV----------PMQRAGMPEEVADAILYLLSPSASYVTGSILNVSG  270 (272)
T ss_dssp             -CC----------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hcC----------CcCCCcCHHHHHHHHHHHhCCccccccCCEEeecC
Confidence            001          12226689999999999987543  2 34566654

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.92  E-value=2.2e-24  Score=187.46  Aligned_cols=210  Identities=16%  Similarity=0.198  Sum_probs=155.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..+. ...     ..++.++.+|++|.+++.++++       ++
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-----LPNTLCAQVDVTDKYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-----CTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-----cCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            4568899999999999999999999999999999986543 221     1368899999999998887765       68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||..........+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+.+           
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~~~-----------  154 (266)
T 3p19_A           89 DAIVNNAGMMLLGQIDTQEANEW--QRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTFP-----------  154 (266)
T ss_dssp             EEEEECCCCCCCCCTTTSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT-----------
T ss_pred             CEEEECCCcCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCCCC-----------
Confidence            99999999865544334444444  5789999999999887765    334 57999999987543221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.||.+.+.+.+.++.+   .|+++..++||.|.++.................     ..+
T Consensus       155 --------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-----~~~  215 (266)
T 3p19_A          155 --------------DHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-----RVD  215 (266)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-----HHH
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh-----ccc
Confidence                          3357999999999999998877   589999999999998754322111110000000     001


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDRA  266 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~  266 (348)
                                .+.+++++|+|+++++++.++..
T Consensus       216 ----------~~r~~~pedvA~av~~l~~~~~~  238 (266)
T 3p19_A          216 ----------MGGVLAADDVARAVLFAYQQPQN  238 (266)
T ss_dssp             ----------TTCCBCHHHHHHHHHHHHHSCTT
T ss_pred             ----------ccCCCCHHHHHHHHHHHHcCCCC
Confidence                      12277999999999999998765

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.92  E-value=4.4e-25  Score=192.45  Aligned_cols=226  Identities=13%  Similarity=0.065  Sum_probs=161.3

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +.+++|++|||||+|+||++++++|+++|++|++++|+..+. ... .+.....++.++.+|++|.+++.++++      
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            345678999999999999999999999999999999976543 211 111223578899999999998888775      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       ++|+|||+||........+.+.++|  ...+++|+.++.++++++...    + .++||++||...+.+..        
T Consensus       102 g~iD~lv~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~~~--------  170 (271)
T 4ibo_A          102 IDVDILVNNAGIQFRKPMIELETADW--QRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELARA--------  170 (271)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCT--------
T ss_pred             CCCCEEEECCCCCCCCCchhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCCCC--------
Confidence             6899999999865544334444445  578999999999998877643    3 57999999977543221        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +...|+.||.+.+.+.+.++.+   .++++..++||.|.++.......  ..........   
T Consensus       171 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~---  228 (271)
T 4ibo_A          171 -----------------TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALID--NPEFDAWVKA---  228 (271)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHH--CHHHHHHHHH---
T ss_pred             -----------------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhccc--CHHHHHHHHh---
Confidence                             3457999999999999998877   58999999999998874221000  0001111100   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ..          ..+.+..++|+|+++++++....  ..| .+++.+.
T Consensus       229 ~~----------p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  266 (271)
T 4ibo_A          229 RT----------PAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGG  266 (271)
T ss_dssp             HS----------TTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cC----------CCCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCC
Confidence            01          12236789999999999887543  344 4666544

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.92  E-value=3e-24  Score=187.78  Aligned_cols=225  Identities=17%  Similarity=0.134  Sum_probs=160.2

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +.+++|++|||||+|+||++++++|+++|++|++++|+..+. .....  ...++.++.+|++|.+++.++++       
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE--IGSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH--HCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--hCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            345678999999999999999999999999999999986544 22211  12468899999999998887765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|+|||+||..........+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+.+         
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  168 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETW--DRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSAIA---------  168 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSCCT---------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcCCC---------
Confidence            6899999999765544334444445  57899999999999888753    33 57999999987543211         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCC---CCchHHHHHhhhcCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSS---VPSSIQVLLSPITGD  228 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~~  228 (348)
                                      +...|+.||.+.+.+.+.++.+.   ++++..++||.|.++.....   ...... ....... 
T Consensus       169 ----------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~-  230 (277)
T 4dqx_A          169 ----------------DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAK-LRSDFNA-  230 (277)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHH-HHHHHHT-
T ss_pred             ----------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhH-HHHHHHh-
Confidence                            34579999999999999988774   79999999999987631000   000000 0000000 


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                                  ....+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       231 ------------~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  268 (277)
T 4dqx_A          231 ------------RAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGG  268 (277)
T ss_dssp             ------------TSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             ------------cCcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCc
Confidence                        1122337799999999999987643  244 5666544

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.92  E-value=4.2e-24  Score=184.14  Aligned_cols=224  Identities=15%  Similarity=0.114  Sum_probs=152.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC-CccccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP-GKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|+++||||+|+||+++++.|+++|++|++++|++ .+... .+.....++.++.+|++|.+++.++++       +
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA-AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH-HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH-HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999987 33311 111122468899999999998877653       7


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+||........+.+.++|  ...+++|+.++.++++++    ++.+ .++||++||...+.+.+          
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  149 (249)
T 2ew8_A           83 CDILVNNAGIYPLIPFDELTFEQW--KKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIE----------  149 (249)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCS----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCC----------
Confidence            899999999765433223333444  578999999988888874    4444 67999999987543211          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.||.+.+.+.+.++.+   .+++++.++|+.|.++...............    ... .
T Consensus       150 ---------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~----~~~-~  209 (249)
T 2ew8_A          150 ---------------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLP----NML-Q  209 (249)
T ss_dssp             ---------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CTT-S
T ss_pred             ---------------CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHH----Hhh-C
Confidence                           3457999999999999998876   4899999999999987533110000000000    000 1


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      +          .+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       210 ~----------~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG  245 (249)
T 2ew8_A          210 A----------IPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG  245 (249)
T ss_dssp             S----------SCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             c----------cCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCC
Confidence            1          1237899999999999987532  344 4555443

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=6.2e-24  Score=183.86  Aligned_cols=224  Identities=17%  Similarity=0.108  Sum_probs=156.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..+.......   .. .++.+|++|.+++.++++       ++|
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD   79 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI---GG-AFFQVDLEDERERVRFVEEAAYALGRVD   79 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHH---TC-EEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh---hC-CEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            4568999999999999999999999999999999986542111111   13 788999999988877664       689


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+||........+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+.+            
T Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------------  144 (256)
T 2d1y_A           80 VLVNNAAIAAPGSALTVRLPEW--RRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQ------------  144 (256)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCT------------
T ss_pred             EEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCC------------
Confidence            9999999765433333333444  57899999999999998754    34 67999999987543211            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   +...|+.||.+.+.+.+.++.+   .++++..++|+.+.++...       ..+...... ......
T Consensus       145 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-------~~~~~~~~~-~~~~~~  203 (256)
T 2d1y_A          145 -------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVL-------EAIALSPDP-ERTRRD  203 (256)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------HHHC---------CHH
T ss_pred             -------------CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhh-------hccccccCC-HHHHHH
Confidence                         3357999999999999998876   4799999999999775211       000000000 000000


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ..   .....+.+++++|+|+++++++..+.  ..| .+++.+.
T Consensus       204 ~~---~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG  244 (256)
T 2d1y_A          204 WE---DLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGG  244 (256)
T ss_dssp             HH---TTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HH---hcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            00   11123458899999999999987652  244 5666544

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.92  E-value=4.9e-24  Score=184.68  Aligned_cols=217  Identities=15%  Similarity=0.110  Sum_probs=153.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+..+. .....    .++.++.+|++|.+++.++++       +
T Consensus        24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (260)
T 3gem_A           24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ----AGAVALYGDFSCETGIMAFIDLLKTQTSS   99 (260)
T ss_dssp             ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH----HTCEEEECCTTSHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh----cCCeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            34568999999999999999999999999999999987654 21111    147899999999998887765       6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      +|+|||+||...... ...+.++|  ...+++|+.++.++++++...   ....+||++||...+.+.+           
T Consensus       100 iD~lv~nAg~~~~~~-~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----------  165 (260)
T 3gem_A          100 LRAVVHNASEWLAET-PGEEADNF--TRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS-----------  165 (260)
T ss_dssp             CSEEEECCCCCCCCC-TTCHHHHH--HHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS-----------
T ss_pred             CCEEEECCCccCCCC-CCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC-----------
Confidence            899999999765433 23333444  478999999999999988642   2257999999987543221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                    +...|+.||.+.+.+.+.++.+.  ++++..++||.|.++.....  ..   ......    ..+ 
T Consensus       166 --------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~--~~---~~~~~~----~~p-  221 (260)
T 3gem_A          166 --------------KHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA--AY---RANALA----KSA-  221 (260)
T ss_dssp             --------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------------CC-
T ss_pred             --------------CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH--HH---HHHHHh----cCC-
Confidence                          33579999999999999998774  49999999999987643211  00   001100    111 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCCCCce-EEEecc
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQ-YICCVK  275 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~-y~~~~~  275 (348)
                      .++         +..++|+|++++++++.....|. +++.+.
T Consensus       222 ~~r---------~~~~edva~~v~~L~~~~~itG~~i~vdGG  254 (260)
T 3gem_A          222 LGI---------EPGAEVIYQSLRYLLDSTYVTGTTLTVNGG  254 (260)
T ss_dssp             SCC---------CCCTHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             CCC---------CCCHHHHHHHHHHHhhCCCCCCCEEEECCC
Confidence            122         55799999999999976666554 666543

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.92  E-value=4.9e-24  Score=183.42  Aligned_cols=221  Identities=19%  Similarity=0.142  Sum_probs=155.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc-CCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVR-DPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r-~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+++||||+|+||++++++|+++|++|++++| +..+. .... +.....++.++.+|++|.+++.++++       
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999999999 54332 1111 11113468899999999998887765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|+|||+||........+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+.+         
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  149 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEW--DTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNP---------  149 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT---------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCCC---------
Confidence            6999999999765433223333334  57899999998777776643    34 57999999987544321         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      +...|+.||.+.+.+.+.++.+   .+++++.++|+.+.++............+   ...    
T Consensus       150 ----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~----  206 (246)
T 2uvd_A          150 ----------------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEM---LKL----  206 (246)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHH---HHT----
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHH---Hhc----
Confidence                            3357999999999999888765   48999999999998875432111111111   000    


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCV  274 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  274 (348)
                      .+          .+.+++++|+|+++++++....  ..| .+++.+
T Consensus       207 ~p----------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg  242 (246)
T 2uvd_A          207 IP----------AAQFGEAQDIANAVTFFASDQSKYITGQTLNVDG  242 (246)
T ss_dssp             CT----------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CC----------CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECc
Confidence            11          1227899999999999987542  234 455544

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.92  E-value=2.6e-24  Score=188.44  Aligned_cols=227  Identities=19%  Similarity=0.139  Sum_probs=160.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       +
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999999999999999986543 2221 12223578899999999998887765       6


Q ss_pred             CCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           80 CDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        80 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +|++||+||.... ......+.++|  ...+++|+.++.++++++...    + ..+||++||...+... .        
T Consensus        86 iD~lvnnAg~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-~--------  153 (280)
T 3tox_A           86 LDTAFNNAGALGAMGEISSLSVEGW--RETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAG-F--------  153 (280)
T ss_dssp             CCEEEECCCCCCSCSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBC-C--------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCC-C--------
Confidence            8999999997533 22223333444  578999999999999987643    3 5699999997643110 1        


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                     ++...|+.||.+.+.+.+.++.+   .++++..++||.|.++......+..............  
T Consensus       154 ---------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--  216 (280)
T 3tox_A          154 ---------------AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH--  216 (280)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTS--
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccC--
Confidence                           13457999999999999999877   4899999999999998543211000000111111110  


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                                 ..+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       217 -----------p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  252 (280)
T 3tox_A          217 -----------ALKRIARPEEIAEAALYLASDGASFVTGAALLADGG  252 (280)
T ss_dssp             -----------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----------ccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCC
Confidence                       12237799999999999998643  344 5666544

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.92  E-value=1.3e-24  Score=188.16  Aligned_cols=223  Identities=17%  Similarity=0.094  Sum_probs=158.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEE-EcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHAT-VRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~-~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      ++|++|||||+|+||++++++|+++|++|+++ +|+..+. .... +.....++.++.+|++|.+++.++++       +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999987 6665433 2111 11223478999999999998887765       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||+||........+.+.++|  ...+++|+.++.++++++.    +.+ ..+||++||...+.+.+          
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~----------  149 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHW--DWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYLE----------  149 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBCT----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCCC----------
Confidence            799999999755444334444444  5789999999999999884    334 57999999987543211          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.||.+.+.+.+.++.+.   ++++..++||.|.++....... ...........    .
T Consensus       150 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~----~  209 (258)
T 3oid_A          150 ---------------NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-REDLLEDARQN----T  209 (258)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-HHHHHHHHHHH----C
T ss_pred             ---------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-CHHHHHHHHhc----C
Confidence                           34579999999999999998875   7999999999998875332111 00001111100    1


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                                ..+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       210 ----------p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG  245 (258)
T 3oid_A          210 ----------PAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGG  245 (258)
T ss_dssp             ----------TTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTT
T ss_pred             ----------CCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence                      12337799999999999998653  244 5666543

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.92  E-value=2.1e-24  Score=185.76  Aligned_cols=221  Identities=18%  Similarity=0.147  Sum_probs=156.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhh---cCCCEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAV---MGCDGVF   84 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~~~d~Vi   84 (348)
                      +++|+++||||+|+||++++++|+++|++|++++|+..+. ....    ..++.++.+|++|.+++.+++   .++|+||
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv   79 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----YPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----STTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh----ccCceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence            4578999999999999999999999999999999976544 2221    136889999999999887664   4689999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      |+||........+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+.+.              
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~--------------  142 (246)
T 2ag5_A           80 NVAGFVHHGTVLDCEEKDW--DFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVV--------------  142 (246)
T ss_dssp             ECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCT--------------
T ss_pred             ECCccCCCCCcccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCCC--------------
Confidence            9999765433223333444  57899999999999998763    34 579999999764332110              


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCC---chHHHHHhhhcCCCCcccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVP---SSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~  234 (348)
                                +...|+.+|.+.|.+++.++.+   .+++++++||+.|+++.......   ............    .+ 
T Consensus       143 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~-  207 (246)
T 2ag5_A          143 ----------NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKR----QK-  207 (246)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHT----CT-
T ss_pred             ----------CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhc----CC-
Confidence                      3357999999999999998876   38999999999999874211000   000000011100    01 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCV  274 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  274 (348)
                               ...+++++|+|+++++++....  ..| .+.+.+
T Consensus       208 ---------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdg  241 (246)
T 2ag5_A          208 ---------TGRFATAEEIAMLCVYLASDESAYVTGNPVIIDG  241 (246)
T ss_dssp             ---------TSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             ---------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence                     1227899999999999987543  344 455544

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.92  E-value=5.9e-24  Score=185.72  Aligned_cols=226  Identities=17%  Similarity=0.106  Sum_probs=155.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhh--------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAV--------   77 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~--------   77 (348)
                      .+++|+++||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.+++        
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35578999999999999999999999999999999986543 2111 1112346889999999999887766        


Q ss_pred             cCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           78 MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        78 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      .++|++||+||........+.+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+.+        
T Consensus        98 g~id~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~--------  166 (273)
T 1ae1_A           98 GKLNILVNNAGVVIHKEAKDFTEKDY--NIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALP--------  166 (273)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCT--------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCCC--------
Confidence            46899999999765433333333444  5789999999999999884    334 57999999987543211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCc---hHHHHHhhhcC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPS---SIQVLLSPITG  227 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~---~~~~~~~~~~~  227 (348)
                                       +...|+.||.+.+.+.+.++.+.   +++++.++|+.|+++........   ...........
T Consensus       167 -----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  229 (273)
T 1ae1_A          167 -----------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK  229 (273)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHH
T ss_pred             -----------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhc
Confidence                             33579999999999999988764   89999999999999864321110   00001111100


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                          .+          .+.+.+++|+|+++.+++....  ..| .+++.+.
T Consensus       230 ----~p----------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  266 (273)
T 1ae1_A          230 ----TP----------MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGG  266 (273)
T ss_dssp             ----ST----------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CC----------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCC
Confidence                11          1227799999999999987532  244 4555443

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.92  E-value=4.6e-24  Score=183.71  Aligned_cols=221  Identities=19%  Similarity=0.155  Sum_probs=161.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..+. ......  .....++.+|++|.+++.++++       +
T Consensus         6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (248)
T 3op4_A            6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL--GDNGKGMALNVTNPESIEAVLKAITDEFGG   83 (248)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--GGGEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--cccceEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            45678999999999999999999999999999999986544 222111  1257889999999998888775       7


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||+||........+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+.+          
T Consensus        84 iD~lv~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~----------  150 (248)
T 3op4_A           84 VDILVNNAGITRDNLLMRMKEEEW--SDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGNA----------  150 (248)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCC----------
Confidence            899999999865544334444444  57899999999999998754    33 57999999987554321          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.||.+.+.+.+.++.+   .++++..++||.|..+......+..   .......    .
T Consensus       151 ---------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~----~  208 (248)
T 3op4_A          151 ---------------GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQ---RTATLAQ----V  208 (248)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHH---HHHHHHT----C
T ss_pred             ---------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHH---HHHHHhc----C
Confidence                           3457999999999999998876   4799999999999887543321111   1111111    1


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QG-QYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  275 (348)
                                ..+.+.+++|+|+++.+++.....  .| .+++.+.
T Consensus       209 ----------p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG  244 (248)
T 3op4_A          209 ----------PAGRLGDPREIASAVAFLASPEAAYITGETLHVNGG  244 (248)
T ss_dssp             ----------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----------CCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence                      123377999999999999875432  44 4566543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.92  E-value=8.7e-25  Score=187.86  Aligned_cols=221  Identities=16%  Similarity=0.097  Sum_probs=154.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEE-EcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHAT-VRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~-~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +|+|+||||+|+||++++++|+++|++|+++ +|+..+. .... +.....++.++.+|++|.+++.++++       ++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            3689999999999999999999999999995 6765432 1111 11112468889999999998888775       68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      |+|||+||..........+.++|  ...+++|+.++.++++++.+.   ...++||++||...+++.+            
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------  146 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQW--DEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI------------  146 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT------------
T ss_pred             CEEEECCCCCCCcCcccCCHHHH--HHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCC------------
Confidence            99999999765432222222333  478999999999999988753   1267999999986554321            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   +...|+.+|.+.+.+.+.++++   .+++++++||+.++++......+    .........   .+ 
T Consensus       147 -------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~~~~---~~-  205 (244)
T 1edo_A          147 -------------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE----DMEKKILGT---IP-  205 (244)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH----HHHHHHHTS---CT-
T ss_pred             -------------CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcCh----HHHHHHhhc---CC-
Confidence                         3357999999999999988876   58999999999999874322111    111111111   11 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC---C-CceEEEecc
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR---A-QGQYICCVK  275 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~-~~~y~~~~~  275 (348)
                               .+.+++++|+|+++.+++.++.   . +..|++.+.
T Consensus       206 ---------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG  241 (244)
T 1edo_A          206 ---------LGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             ---------TCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred             ---------CCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence                     2237899999999999984432   2 345666543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.92  E-value=2.1e-24  Score=187.28  Aligned_cols=232  Identities=14%  Similarity=0.031  Sum_probs=159.2

Q ss_pred             CCCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++|++|||||+  |+||++++++|+++|++|++++|+.... ....+......+.++.+|++|.+++.++++      
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4567899999999  9999999999999999999999986411 111111111247889999999998887765      


Q ss_pred             -CCCEEEEccccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCC
Q 035965           79 -GCDGVFHVAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 -~~d~Vih~a~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                       ++|+|||+||....    ....+.+.++|  ...+++|+.++.++++++...- ..++||++||...+.+.+       
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-------  155 (261)
T 2wyu_A           85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDW--LLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP-------  155 (261)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT-------
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCC-------
Confidence             68999999997543    11112233333  5789999999999999998651 136999999976543211       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        +...|+.||.+.+.+.+.++.+.   +++++.++|+.|+++..... .............  
T Consensus       156 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~--  214 (261)
T 2wyu_A          156 ------------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI-PGFTKMYDRVAQT--  214 (261)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC-TTHHHHHHHHHHH--
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc-cccHHHHHHHHhc--
Confidence                              33579999999999999988774   89999999999999853321 1111111111111  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--C-CceEEEecc-CcChHH
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--A-QGQYICCVK-SCPISE  281 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~-~~~y~~~~~-~~s~~e  281 (348)
                        .+          .+.+.+++|+|+++++++....  . +..+++.+. ..+..|
T Consensus       215 --~p----------~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~  258 (261)
T 2wyu_A          215 --AP----------LRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMGME  258 (261)
T ss_dssp             --ST----------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             --CC----------CCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccCCC
Confidence              11          1126799999999999987532  2 345666544 444333

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.92  E-value=3.4e-24  Score=187.58  Aligned_cols=232  Identities=16%  Similarity=0.107  Sum_probs=159.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..+. ... .+.....++.++.+|++|.+++.++++       +
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4467999999999999999999999999999999986543 111 111112468899999999998887765       6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc------CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS------ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      +|+|||+||........+.+.++|  ...+++|+.++.++++++...      + .++||++||...+.+.+        
T Consensus       100 iD~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~--------  168 (277)
T 2rhc_B          100 VDVLVNNAGRPGGGATAELADELW--LDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVV--------  168 (277)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSCCT--------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccCCC--------
Confidence            899999999765433223333344  578999999999999998765      3 57999999986543211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC-C
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD-S  229 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~  229 (348)
                                       +...|+.+|.+.+.+.+.++.+   .++++++++|+.++++....    ....+....... .
T Consensus       169 -----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~~~  227 (277)
T 2rhc_B          169 -----------------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS----VREHYSDIWEVSTE  227 (277)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH----HHHHHHHHHTCCHH
T ss_pred             -----------------CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh----hhhhcccccccchH
Confidence                             3357999999999999998876   47999999999998864211    000000000000 0


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ........   ....+.+++++|+|+++++++..+.  ..| .+++.+.
T Consensus       228 ~~~~~~~~---~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          228 EAFDRITA---RVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             HHHHHHHH---HSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHh---cCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            00000000   0123348899999999999987643  234 5666554

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.92  E-value=1.3e-23  Score=181.09  Aligned_cols=224  Identities=15%  Similarity=0.081  Sum_probs=148.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+....   .     .++.++.+|++|.+++.++++       ++
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~---~-----~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   75 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE---Q-----YPFATEVMDVADAAQVAQVCQRLLAETERL   75 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS---C-----CSSEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh---c-----CCceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            35578999999999999999999999999999999976421   0     137889999999998888775       68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||........+.+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+.+           
T Consensus        76 d~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-----------  141 (250)
T 2fwm_X           76 DALVNAAGILRMGATDQLSKEDW--QQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPRI-----------  141 (250)
T ss_dssp             CEEEECCCCCCCCCTTTSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT-----------
T ss_pred             CEEEECCCcCCCCCcccCCHHHH--HHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCC-----------
Confidence            99999999765433223333444  5789999999999999883    344 57999999987542211           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHh-hhcCCCCcc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLS-PITGDSKFF  232 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~  232 (348)
                                    +...|+.+|.+.|.+.+.++.+   .+++++++||+.++++........  ..... .+.......
T Consensus       142 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~  205 (250)
T 2fwm_X          142 --------------GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVS--DDAEEQRIRGFGEQF  205 (250)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccC--hhHHHHHHhhhhhcc
Confidence                          3457999999999999998876   489999999999999864321000  00000 000000000


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .  ..    ...+.+.+++|+|+++++++..+.  ..| .+.+.+.
T Consensus       206 ~--~~----~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (250)
T 2fwm_X          206 K--LG----IPLGKIARPQEIANTILFLASDLASHITLQDIVVDGG  245 (250)
T ss_dssp             ----------------CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c--cc----CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            0  00    011237899999999999987643  344 4555443

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.92  E-value=3.9e-24  Score=185.59  Aligned_cols=232  Identities=14%  Similarity=0.073  Sum_probs=156.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC-C--CCCeEEEEccCCCcchHHHhhc-----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT-R--SDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..+. ....... .  ..++.++.+|++|.+++.++++     
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999999976543 2111100 0  1268899999999999888775     


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       ++|+|||+||........+.+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+.+        
T Consensus        84 ~gid~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  152 (260)
T 2z1n_A           84 GGADILVYSTGGPRPGRFMELGVEDW--DESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQ--------  152 (260)
T ss_dssp             TCCSEEEECCCCCCCBCGGGCCHHHH--HHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT--------
T ss_pred             cCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCC--------
Confidence             5999999999754433223333444  5789999999977777664    334 68999999987543211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHH--HHHhhhcCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQ--VLLSPITGD  228 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~--~~~~~~~~~  228 (348)
                                       +...|+.+|.+.+.+.+.++.+.   +++++.++|+.|+++...........  ......  .
T Consensus       153 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~  213 (260)
T 2z1n_A          153 -----------------DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEE--A  213 (260)
T ss_dssp             -----------------TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-------------------
T ss_pred             -----------------CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHH--H
Confidence                             34579999999999999988764   89999999999999864411000000  000000  0


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ...+.  ..    ...+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       214 ~~~~~--~~----~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          214 LKSMA--SR----IPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGG  257 (260)
T ss_dssp             --------C----CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHH--hc----CCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            00000  00    012237799999999999987632  344 4555443

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.92  E-value=1.9e-24  Score=187.59  Aligned_cols=225  Identities=13%  Similarity=0.067  Sum_probs=155.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc-CCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVR-DPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r-~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+||||||+|+||++++++|+++|++|++++| +..+. .... +.....++.++.+|++|.+++.++++       
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999999999 54322 1111 11112467889999999998887765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|+|||+||..........+.++|  ...+++|+.++.++++++...    +..++||++||...+.+.          
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  152 (261)
T 1gee_A           85 KLDVMINNAGLENPVSSHEMSLSDW--NKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW----------  152 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHH--HHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC----------
Confidence            7899999999765433222333333  478999999999988887653    214699999997643211          


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                     ++...|+.+|.+.+.+.+.++.+.   +++++++||+.|+++.......  .......+..   .
T Consensus       153 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~---~  212 (261)
T 1gee_A          153 ---------------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA--DPEQRADVES---M  212 (261)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH--SHHHHHHHHT---T
T ss_pred             ---------------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhccc--ChhHHHHHHh---c
Confidence                           144679999999999998887763   8999999999999985321000  0001111111   0


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .+          .+.+++++|+|+++++++....  ..| .+++.+.
T Consensus       213 ~~----------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  249 (261)
T 1gee_A          213 IP----------MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             CT----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC----------CCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence            11          2237899999999999987532  234 4566544

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.92  E-value=3.5e-24  Score=187.34  Aligned_cols=229  Identities=17%  Similarity=0.059  Sum_probs=156.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHH-CCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLE-RGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~-~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      ++++|+||||+|+||++++++|++ .|++|++++|+..+. ... .+.....++.++.+|++|.+++.++++       +
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            468999999999999999999999 999999999976533 111 111112468899999999998888776       7


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCC------CCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGE------WRP  152 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~------~~~  152 (348)
                      +|+|||+||............++|  ...+++|+.++.++++++...- ..++||++||..++++.....+      ...
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~  160 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQA--EVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE  160 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHH--HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred             CCEEEECCcccccCCCccccHHHH--HhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence            999999999764332111101222  4789999999999999998762 1359999999876643111000      000


Q ss_pred             cccCCCCCCcc----------hhhccCCCcchhHhhHHHHHHHHHHHHHh-------CCCcEEEEecCccccCCCCCCCC
Q 035965          153 VVDESCQTPIH----------HVWNKKASGWVYVLSKLLSEETAFKFANE-------NKIDLVSVITTTVAGPFLTSSVP  215 (348)
Q Consensus       153 ~~~E~~~~~~~----------~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~~lR~~~v~G~~~~~~~~  215 (348)
                      +++|+++....          .......|...|+.||.+.|.+++.++.+       .+++++.++||.|.++....   
T Consensus       161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---  237 (276)
T 1wma_A          161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---  237 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT---
T ss_pred             ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc---
Confidence            12221100000          00000113468999999999999988766       58999999999998764221   


Q ss_pred             chHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC----CCceEEE
Q 035965          216 SSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR----AQGQYIC  272 (348)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~----~~~~y~~  272 (348)
                                            ..       +++++|+|+++++++..+.    ..|.|+.
T Consensus       238 ----------------------~~-------~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          238 ----------------------KA-------TKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             ----------------------TC-------SBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             ----------------------cc-------cCChhHhhhhHhhhhcCcccccccCceEec
Confidence                                  01       6699999999999997552    3565544

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.92  E-value=6.9e-24  Score=184.76  Aligned_cols=209  Identities=17%  Similarity=0.172  Sum_probs=153.5

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCC---CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc----
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERG---YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g---~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      ..+++|+||||||+|+||++++++|+++|   ++|++++|+..+. .+..+.....++.++.+|++|.+++.++++    
T Consensus        17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   96 (267)
T 1sny_A           17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG   96 (267)
T ss_dssp             ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence            44568899999999999999999999999   9999999987654 222221123478999999999999888776    


Q ss_pred             -----CCCEEEEccccCc-cccccccccccchhhhhhhhhHHHHHHHHHHHhhcC---------C-----cceEEEeccc
Q 035965           79 -----GCDGVFHVAASME-FDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE---------S-----VKRVVLTSSV  138 (348)
Q Consensus        79 -----~~d~Vih~a~~~~-~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---------~-----~~~~v~~SS~  138 (348)
                           ++|+|||+||... .........++|  ...+++|+.++.++++++...-         .     .++||++||.
T Consensus        97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  174 (267)
T 1sny_A           97 VTKDQGLNVLFNNAGIAPKSARITAVRSQEL--LDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI  174 (267)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             hcCCCCccEEEECCCcCCCccccccCCHHHH--HHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecc
Confidence                 7999999999765 222122222333  4789999999999999886531         0     3689999998


Q ss_pred             eeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCC
Q 035965          139 STITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVP  215 (348)
Q Consensus       139 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~  215 (348)
                      ..+.+...                      ..+...|+.+|.+.|.+++.++.+   .+++++++||+.|..+....   
T Consensus       175 ~~~~~~~~----------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---  229 (267)
T 1sny_A          175 LGSIQGNT----------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS---  229 (267)
T ss_dssp             GGCSTTCC----------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT---
T ss_pred             cccccCCC----------------------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC---
Confidence            75433211                      013457999999999999998877   58999999999987653211   


Q ss_pred             chHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          216 SSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                                            ..       ++..+|+|+.++.++....  ..|.|+
T Consensus       230 ----------------------~~-------~~~~~~~a~~~~~~~~~~~~~~~G~~~  258 (267)
T 1sny_A          230 ----------------------SA-------PLDVPTSTGQIVQTISKLGEKQNGGFV  258 (267)
T ss_dssp             ----------------------TC-------SBCHHHHHHHHHHHHHHCCGGGTTCEE
T ss_pred             ----------------------CC-------CCCHHHHHHHHHHHHHhcCcCCCCcEE
Confidence                                  01       4578999999999887542  345554

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.92  E-value=2.1e-23  Score=181.89  Aligned_cols=223  Identities=15%  Similarity=0.090  Sum_probs=159.6

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccc-cccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++++..+.  ... .+.....++.++.+|++|.+++.++++      
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34578999999999999999999999999999998765322  111 111123578899999999998887765      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                       ++|++||+||........+.+.++|  ...+++|+.++..+++++... ....+||++||....... .          
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~-~----------  174 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADF--DEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP-W----------  174 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC-S----------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC-C----------
Confidence             7899999999865544334444555  578999999999999998764 225799999996532110 0          


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                   ++...|+.||.+.+.+.+.++.+.   ++++..++||.|.++....... ....+..   .    .+
T Consensus       175 -------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~---~----~~  233 (271)
T 3v2g_A          175 -------------PGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD-HAEAQRE---R----IA  233 (271)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS-SHHHHHH---T----CT
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch-hHHHHHh---c----CC
Confidence                         134579999999999999988774   8999999999999886543211 1111111   1    11


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCV  274 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  274 (348)
                       .++         +..++|+|+++++++....  ..| .+++.+
T Consensus       234 -~~r---------~~~pedvA~~v~fL~s~~~~~itG~~i~vdG  267 (271)
T 3v2g_A          234 -TGS---------YGEPQDIAGLVAWLAGPQGKFVTGASLTIDG  267 (271)
T ss_dssp             -TSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CCC---------CCCHHHHHHHHHHHhCcccCCccCCEEEeCc
Confidence             122         6689999999999986432  344 455544

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.92  E-value=7.8e-24  Score=182.96  Aligned_cols=220  Identities=15%  Similarity=0.081  Sum_probs=154.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       ++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999999999999999999999999999999986543 221111  2357889999999998887776       79


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHH----HhhcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA----CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||........+.+.++|  ...+++|+.++..++++    +++.+ .++||++||...+.+.+           
T Consensus        81 D~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----------  146 (254)
T 1hdc_A           81 DGLVNNAGISTGMFLETESVERF--RKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLA-----------  146 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCC-----------
Confidence            99999999765432223333344  57899999999865554    44445 68999999987543211           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.||.+.+.+.+.++.+   .+++++.+||+.|+++....        +.   ......+.
T Consensus       147 --------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------~~---~~~~~~~~  201 (254)
T 1hdc_A          147 --------------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE--------TG---IRQGEGNY  201 (254)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH--------HT---CCCSTTSC
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc--------cc---hhHHHHHH
Confidence                          3457999999999999998876   47999999999998873110        00   00000000


Q ss_pred             cccccccCCCCccee-eHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          234 ILSSVSNRMGSIALV-HIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i-~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                        ...    ....+. +++|+|+++++++..+.  ..| .+++.+.
T Consensus       202 --~~~----p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          202 --PNT----PMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             --TTS----TTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --hcC----CCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence              000    112277 99999999999987642  344 4555543

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.92  E-value=2e-24  Score=187.34  Aligned_cols=233  Identities=15%  Similarity=0.107  Sum_probs=155.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc-c-ccccc-cCC-CCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK-L-QIFSK-WTR-SDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~-~-~~~~~-~~~-~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +++|+++||||+|+||+++++.|+++|++|++++|+..+ . ..... ... ..++.++.+|++|.+++.++++      
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            456899999999999999999999999999999998654 3 21111 000 2468889999999998887765      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       ++|+|||+||........+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+.+        
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  150 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKW--DAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASA--------  150 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT--------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCCC--------
Confidence             6999999999765433223333444  57899999999999988853    33 57999999987543211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +...|+.||.+.+.+.+.++.+   .+++++.++|+.|.++............. . ... ..
T Consensus       151 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~-~~~-~~  210 (260)
T 1x1t_A          151 -----------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKN-G-VDQ-ET  210 (260)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhcccc-C-Cch-HH
Confidence                             3357999999999999998876   47999999999999885432111000000 0 000 00


Q ss_pred             ccccc-cccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          231 FFSIL-SSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       231 ~~~~~-~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ..... ..   ....+.+++++|+|+++++++....  ..| .+++.+.
T Consensus       211 ~~~~~~~~---~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG  256 (260)
T 1x1t_A          211 AARELLSE---KQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             ----CHHH---HCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhhc---cCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence            00000 00   0012348899999999999987542  344 4566543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.92  E-value=5.2e-24  Score=185.55  Aligned_cols=219  Identities=14%  Similarity=0.073  Sum_probs=159.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+....  .... +.....++.++.+|++|.+++.++++       
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4568999999999999999999999999999999854322  1111 11123478899999999998887765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|++||+||........+.+.++|  ...+++|+.++.++++++..    .+ ..+||++||...+.+.+         
T Consensus       106 ~id~lv~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  173 (269)
T 4dmm_A          106 RLDVLVNNAGITRDTLLLRMKRDDW--QSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNP---------  173 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCCT---------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCC---------
Confidence            6899999999865544334444445  57899999999999998753    33 57999999987554322         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      ....|+.||.+.+.+.+.++.+   .|+++..++||.|.++....    ...  .....    .
T Consensus       174 ----------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----~~~--~~~~~----~  227 (269)
T 4dmm_A          174 ----------------GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE----LAA--EKLLE----V  227 (269)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH----HHH--HHHGG----G
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc----ccH--HHHHh----c
Confidence                            2357999999999999998876   58999999999998875432    111  11111    1


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC---CCc-eEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR---AQG-QYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~-~y~~~~~  275 (348)
                      .+          .+.+.+++|+|+++++++..+.   ..| .+++.+.
T Consensus       228 ~p----------~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG  265 (269)
T 4dmm_A          228 IP----------LGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGG  265 (269)
T ss_dssp             CT----------TSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTT
T ss_pred             CC----------CCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCC
Confidence            11          2226799999999999998742   234 5666543

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.92  E-value=4.7e-24  Score=186.49  Aligned_cols=225  Identities=17%  Similarity=0.106  Sum_probs=155.6

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|+++||||+|+||++++++|+++|++|++++|+..+. ..........++.++.+|++|.+++.++++       +
T Consensus        26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (276)
T 2b4q_A           26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSAR  105 (276)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            34568999999999999999999999999999999986543 221111111268889999999988877765       6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCC---cceEEEeccceeeeecCCCCCCCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SES---VKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~---~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      +|+|||+||........+.+.++|  ...+++|+.++.++++++..    .+.   .++||++||...+.+.+       
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~-------  176 (276)
T 2b4q_A          106 LDILVNNAGTSWGAALESYPVSGW--EKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG-------  176 (276)
T ss_dssp             CSEEEECCCCCCCCCTTSCCSHHH--HHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC-------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC-------
Confidence            899999999765433233333444  57899999999888887653    231   27999999987543221       


Q ss_pred             cccCCCCCCcchhhccCCCcc-hhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          153 VVDESCQTPIHHVWNKKASGW-VYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                                        ... .|+.||.+.+.+.+.++.+   .+++++.++|+.+.++....    ............
T Consensus       177 ------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~  234 (276)
T 2b4q_A          177 ------------------EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH----IANDPQALEADS  234 (276)
T ss_dssp             ------------------CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH----HHHCHHHHHHHH
T ss_pred             ------------------CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh----cchhHHHHHHhh
Confidence                              112 6999999999999998876   48999999999998874221    000000000000


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCV  274 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  274 (348)
                       ...+          .+.+.+++|+|+++++++..+.  ..| .+++.+
T Consensus       235 -~~~p----------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  272 (276)
T 2b4q_A          235 -ASIP----------MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDG  272 (276)
T ss_dssp             -HTST----------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -cCCC----------CCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence             0011          1227799999999999987642  344 455544

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.92  E-value=1.1e-23  Score=184.58  Aligned_cols=226  Identities=15%  Similarity=0.115  Sum_probs=158.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..+. ... .+.....++.++.+|++|.+++.++++       +
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3467899999999999999999999999999999986543 211 111223578999999999998877665       6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh------cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK------SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~------~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      +|+|||+||........+.+.++|  ...+++|+.++.++++++..      .+ .++||++||...+.+..        
T Consensus       102 id~lv~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~~--------  170 (279)
T 3sju_A          102 IGILVNSAGRNGGGETADLDDALW--ADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGVM--------  170 (279)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCCT--------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCCC--------
Confidence            899999999865544334444444  57899999999999998765      23 57999999987543221        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCC-------CCchHHHHHh
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSS-------VPSSIQVLLS  223 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~-------~~~~~~~~~~  223 (348)
                                       ....|+.||.+.+.+.+.++.+   .++++..++||.|.++.....       ..........
T Consensus       171 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  233 (279)
T 3sju_A          171 -----------------YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHE  233 (279)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHH
T ss_pred             -----------------CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHH
Confidence                             3357999999999999999887   579999999999987631100       0000000111


Q ss_pred             hhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          224 PITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .+..             ....+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       234 ~~~~-------------~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  275 (279)
T 3sju_A          234 RFNA-------------KIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG  275 (279)
T ss_dssp             HHHT-------------TCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTT
T ss_pred             HHHh-------------cCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            1111             1123347799999999999987643  344 4566544

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.92  E-value=4.5e-24  Score=185.28  Aligned_cols=229  Identities=17%  Similarity=0.119  Sum_probs=152.5

Q ss_pred             CcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            5 EESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         5 ~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      ..+.+++|++|||||+|+||++++++|+++|++|++++|+..+. .....  ...++.++.+|++|.+++.++++     
T Consensus         3 ~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGE--IGDAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--HCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH--hCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            34566788999999999999999999999999999999987654 22221  12468999999999998887765     


Q ss_pred             --CCCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-------CcceEEEeccceeeeecCCCC
Q 035965           79 --GCDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-------SVKRVVLTSSVSTITAKDSSG  148 (348)
Q Consensus        79 --~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-------~~~~~v~~SS~~~~~~~~~~~  148 (348)
                        ++|+|||+||.... ......+.++|  ...+++|+.++.++++++...-       ...+||++||...+.+.+   
T Consensus        81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---  155 (261)
T 3n74_A           81 FGKVDILVNNAGIGHKPQNAELVEPEEF--DRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP---  155 (261)
T ss_dssp             HSCCCEEEECCCCCCCSCCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCT---
T ss_pred             cCCCCEEEECCccCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCC---
Confidence              68999999997652 22222233334  4789999999999988876431       134699999976443211   


Q ss_pred             CCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhh
Q 035965          149 EWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPI  225 (348)
Q Consensus       149 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~  225 (348)
                                            ....|+.+|.+.+.+.+.++.+   .++++..++|+.+.++................ 
T Consensus       156 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-  212 (261)
T 3n74_A          156 ----------------------NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKK-  212 (261)
T ss_dssp             ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------
T ss_pred             ----------------------CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHH-
Confidence                                  3356999999999999999877   58999999999998875432111000000000 


Q ss_pred             cCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          226 TGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                            +.      .....+.+++++|+|+++++++....  ..| .+++.+.
T Consensus       213 ------~~------~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG  253 (261)
T 3n74_A          213 ------FR------DSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGG  253 (261)
T ss_dssp             ----------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ------Hh------hcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCC
Confidence                  00      01123448899999999999996543  344 4566543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=4.2e-24  Score=187.34  Aligned_cols=215  Identities=17%  Similarity=0.194  Sum_probs=149.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-c--CCCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-W--TRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~--~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +++|+||||||+|+||+++++.|+++|++|++++|+..+. ..... .  .....+.++.+|++|.+++.++++      
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            4568999999999999999999999999999999976543 21111 0  111357889999999998887765      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHH----HHHHHHHHhhcCC-cceEEEeccceeeeecCCCCCCCC
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQS----TLNLLKACLKSES-VKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                       ++|+|||+||............++|  ...+++|+.+    +..+++.+++.+. .++||++||...+...+.      
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~------  181 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSGW--KDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL------  181 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCC------
Confidence             7999999999765433223333334  5789999999    6666777766651 279999999874321111      


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                       .+...|+.+|.+.+.+++.++.+     .+++++.++|+.|.++...           .....
T Consensus       182 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~-----------~~~~~  233 (279)
T 1xg5_A          182 -----------------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF-----------KLHDK  233 (279)
T ss_dssp             -----------------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH-----------HHTTT
T ss_pred             -----------------CCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh-----------hhccc
Confidence                             13457999999999998887764     4799999999999876310           00000


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                      ......  ...    ....+++++|+|+++++++..+.
T Consensus       234 ~~~~~~--~~~----~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          234 DPEKAA--ATY----EQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             CHHHHH--HHH----C---CBCHHHHHHHHHHHHHSCT
T ss_pred             ChhHHh--hhc----ccccCCCHHHHHHHHHHHhcCCc
Confidence            000000  000    11237899999999999998754

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.91  E-value=3.1e-24  Score=186.97  Aligned_cols=222  Identities=18%  Similarity=0.127  Sum_probs=159.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       +
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            3568999999999999999999999999999999976543 2111 11123467899999999998887765       6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||+||........+.+.++|  ...+++|+.++.++++++..    .+ ..+||++||...+.+.+          
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  172 (270)
T 3ftp_A          106 LNVLVNNAGITQDQLAMRMKDDEW--DAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNP----------  172 (270)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCC----------
Confidence            899999999765544334444445  57899999999999998863    23 47899999987554321          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     +...|+.||.+.+.+.+.++.+   .++++..++||.|..+..... ..   .....+...   .
T Consensus       173 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~---~~~~~~~~~---~  230 (270)
T 3ftp_A          173 ---------------GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL-PQ---EQQTALKTQ---I  230 (270)
T ss_dssp             ---------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS-CH---HHHHHHHTT---C
T ss_pred             ---------------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc-CH---HHHHHHHhc---C
Confidence                           3357999999999999998877   489999999999987632211 00   011111111   1


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                                ..+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       231 ----------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  266 (270)
T 3ftp_A          231 ----------PLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGG  266 (270)
T ss_dssp             ----------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----------CCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCC
Confidence                      12337799999999999986432  344 5666544

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.91  E-value=9.5e-24  Score=185.08  Aligned_cols=223  Identities=14%  Similarity=0.076  Sum_probs=154.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++|+||||||+|+||++++++|+++|++|++++|+..+. ..... .....++.++.+|++|.+++.++++       .
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            5578999999999999999999999999999999987643 22111 1112468899999999998887765       4


Q ss_pred             CCEEEEccccCcc-cccc-ccccccchhhhhhhhhHHH----HHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           80 CDGVFHVAASMEF-DINV-KDNIETYVQSTVINPAIQS----TLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        80 ~d~Vih~a~~~~~-~~~~-~~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      +|+|||+||.... .... ....++|  ...+++|+.+    +..+++.+++.+ .++||++||...+.+...       
T Consensus       112 id~li~~Ag~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~-------  181 (279)
T 3ctm_A          112 IDVFVANAGVTWTQGPEIDVDNYDSW--NKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNIP-------  181 (279)
T ss_dssp             CSEEEECGGGSTTC--CCCSSHHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC----------
T ss_pred             CCEEEECCcccccCCcccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCCC-------
Confidence            8999999997644 2211 2222333  4789999999    556666666666 689999999764322100       


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                      .+...|+.+|.+.|.+++.++.+.   + ++..++|+.+.++..... ....  ......    
T Consensus       182 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-~~~~--~~~~~~----  237 (279)
T 3ctm_A          182 ----------------QLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-SKDM--KAKWWQ----  237 (279)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-CHHH--HHHHHH----
T ss_pred             ----------------CCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-ChHH--HHHHHH----
Confidence                            144679999999999999998873   6 899999999988754321 1110  111100    


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ..+          .+.+++++|+|+++++++....  ..| .+++.+.
T Consensus       238 ~~p----------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG  275 (279)
T 3ctm_A          238 LTP----------LGREGLTQELVGGYLYLASNASTFTTGSDVVIDGG  275 (279)
T ss_dssp             HST----------TCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hCC----------ccCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            011          1237899999999999987642  344 4566544

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.91  E-value=8.1e-24  Score=187.34  Aligned_cols=221  Identities=15%  Similarity=0.088  Sum_probs=151.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      ++|+||||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       ++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV  109 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            457899999999999999999999999999999987644 2211 11123478999999999998887765       68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||..........+.++|  ...+++|+.++.++++++...    +..++||++||...+.+.+           
T Consensus       110 d~lvnnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  176 (301)
T 3tjr_A          110 DVVFSNAGIVVAGPLAQMNHDDW--RWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA-----------  176 (301)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT-----------
T ss_pred             CEEEECCCcCCCCCcccCCHHHH--HHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC-----------
Confidence            99999999865443333333444  578999999999999987542    2246899999987543221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.||.+.+.+.+.++.+.   |++++.++||.|..+.....     ........+. ...+
T Consensus       177 --------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-----~~~~~~~~~~-~~~~  236 (301)
T 3tjr_A          177 --------------GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNS-----ERIRGADYGM-SATP  236 (301)
T ss_dssp             --------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHH-----HHHC-----------
T ss_pred             --------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccccc-----ccccchhhcc-ccCh
Confidence                          34579999999999999988763   79999999999877632110     0000000000 0000


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                       .+........+.+++++|+|++++.+++++
T Consensus       237 -~~~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          237 -EGAFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             -------------CCCHHHHHHHHHHHHHHT
T ss_pred             -hhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence             111111124456899999999999999875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.91  E-value=1.5e-23  Score=182.47  Aligned_cols=223  Identities=19%  Similarity=0.107  Sum_probs=156.3

Q ss_pred             CCCCeEEEeCCCC-hhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccC-CCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANG-YIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWT-RSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatG-fiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +++|++|||||+| .||++++++|+++|++|++++|+..+. .... +.. ...++.++.+|++|.+++.++++      
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            4578999999998 599999999999999999999986543 2111 111 12478999999999998887765      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       .+|+|||+||........+.+.++|  ...+++|+.++.++++++...    +...+||++||...+.+..        
T Consensus       100 g~id~li~~Ag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  169 (266)
T 3o38_A          100 GRLDVLVNNAGLGGQTPVVDMTDEEW--DRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH--------  169 (266)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT--------
T ss_pred             CCCcEEEECCCcCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC--------
Confidence             6899999999765544333344444  578999999999999988753    2257899999977543211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +...|+.+|.+.+.+.+.++.+   .++++..++|+.|..+........   .....+.    
T Consensus       170 -----------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~----  225 (266)
T 3o38_A          170 -----------------SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS---ELLDRLA----  225 (266)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------------
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcH---HHHHHHH----
Confidence                             3457999999999999998877   589999999999988753321100   0000000    


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCV  274 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  274 (348)
                               .....+.+.+++|+|+++++++....  ..| .+++.+
T Consensus       226 ---------~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  263 (266)
T 3o38_A          226 ---------SDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSS  263 (266)
T ss_dssp             ----------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             ---------hcCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcC
Confidence                     00123347799999999999988643  344 455544

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.91  E-value=1.1e-23  Score=181.97  Aligned_cols=231  Identities=17%  Similarity=0.092  Sum_probs=164.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|+++||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       ++
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF--GPRVHALRSDIADLNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--GGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999999986544 222111  2368899999999988876654       68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      |++||+||........+.+.++|  ...+++|+.++..+++++... ....+||++||...+.+.+              
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------  147 (255)
T 4eso_A           84 DLLHINAGVSELEPFDQVSEASY--DRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP--------------  147 (255)
T ss_dssp             EEEEECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT--------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC--------------
Confidence            99999999865544334444444  578999999999999999764 1146899999987543221              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCC-CCc-hHHHHHhhhcCCCCcccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSS-VPS-SIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~-~~~-~~~~~~~~~~~~~~~~~~  234 (348)
                                 +...|+.||.+.+.+.+.++.+.   |+++..++||.|.++..... ... ....+......   ..  
T Consensus       148 -----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---~~--  211 (255)
T 4eso_A          148 -----------GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDN---IT--  211 (255)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHH---HS--
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhc---cC--
Confidence                       34579999999999999998875   79999999999998854321 111 11111111100   01  


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCC-CCCc-eEEEecc-CcChHH
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMEND-RAQG-QYICCVK-SCPISE  281 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~-~~~~-~y~~~~~-~~s~~e  281 (348)
                              ..+.+.+++|+|+++++++... ...| .+++.+. ..++.+
T Consensus       212 --------p~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          212 --------PMKRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             --------TTSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred             --------CCCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCcC
Confidence                    1223669999999999988652 2344 4666544 555443

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.91  E-value=1.4e-23  Score=182.59  Aligned_cols=225  Identities=15%  Similarity=0.080  Sum_probs=156.5

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-c-cCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-K-WTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+..+. .... + .....++.++.+|++|.+++.++++     
T Consensus        17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999986543 2111 1 0112468889999999998887765     


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccce-eeeecCCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVS-TITAKDSSGEWR  151 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~-~~~~~~~~~~~~  151 (348)
                        ++|+|||+||........+.+.++|  ...+++|+.++.++++++.    +.+ .++||++||.. ...+  .     
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~--~-----  166 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEF--RQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVT--M-----  166 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCC--S-----
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccC--C-----
Confidence              6899999999765433333333444  5789999999999988774    334 67999999976 2211  1     


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                                        ++...|+.||.+.+.+++.++.+   .++++++++|+.+.++........ -......... 
T Consensus       167 ------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~-  226 (267)
T 1vl8_A          167 ------------------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD-PEKLDYMLKR-  226 (267)
T ss_dssp             ------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC-HHHHHHHHHT-
T ss_pred             ------------------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccC-hHHHHHHHhh-
Confidence                              13457999999999999998876   489999999999987642210000 0000011111 


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                         .+          ...+++++|+|+++++++....  ..|. +.+.+
T Consensus       227 ---~p----------~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  262 (267)
T 1vl8_A          227 ---IP----------LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDG  262 (267)
T ss_dssp             ---CT----------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ---CC----------CCCCcCHHHHHHHHHHHcCccccCCcCCeEEECC
Confidence               11          1127799999999999987542  3454 45544

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.91  E-value=2.3e-23  Score=182.47  Aligned_cols=223  Identities=18%  Similarity=0.114  Sum_probs=147.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      ++|++|||||+|+||+++++.|+++|++|++++|+..+.  ... .+.....++.++.+|++|.+++.++++       +
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  107 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR  107 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999744322  111 111123578999999999998887775       7


Q ss_pred             CCEEEEccccC--ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC------CcceEEEeccceeeeecCCCCCCC
Q 035965           80 CDGVFHVAASM--EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE------SVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        80 ~d~Vih~a~~~--~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~------~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                      +|+|||+||..  ......+.+.++|  ...+++|+.++.++++++...-      ...+||++||...+.+.+      
T Consensus       108 iD~lvnnAg~~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~------  179 (280)
T 4da9_A          108 IDCLVNNAGIASIVRDDFLDLKPENF--DTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSP------  179 (280)
T ss_dssp             CCEEEEECC------CCGGGCCHHHH--HHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------
T ss_pred             CCEEEECCCccccCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCC------
Confidence            89999999973  2222223333444  5789999999999999876531      135899999987654322      


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                                         +...|+.||.+.+.+.+.++.+   .++++..++||.|.++......+.    ........
T Consensus       180 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~  236 (280)
T 4da9_A          180 -------------------ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK----YDGLIESG  236 (280)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------
T ss_pred             -------------------CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh----HHHHHhhc
Confidence                               2357999999999999999877   689999999999988754321110    00000000


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                        ..          ..+.+..++|+|+++++++....  ..| .+++.+.
T Consensus       237 --~~----------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (280)
T 4da9_A          237 --LV----------PMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG  274 (280)
T ss_dssp             -----------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTT
T ss_pred             --CC----------CcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence              11          12336799999999999987654  244 4566443

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.91  E-value=1.2e-23  Score=183.50  Aligned_cols=225  Identities=20%  Similarity=0.156  Sum_probs=158.8

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      +.+++|+|+||||+|+||++++++|+++|++|++++|+..+.  .... ......++.++.+|++|.+++.++++     
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            445678999999999999999999999999999999965432  1111 11123478999999999998887765     


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                        ++|+|||+||........+.+.++|  ...+++|+.++.++++++...   ...++||++||...+.+.+        
T Consensus       105 ~g~id~li~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  174 (271)
T 4iin_A          105 DGGLSYLVNNAGVVRDKLAIKMKTEDF--HHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNM--------  174 (271)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT--------
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHH--HHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCC--------
Confidence              6899999999866544333334444  578999999999988887542   1257999999987543221        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +...|+.+|.+.+.+.+.++.+   .++++..++||.|..+......+.    ...   ....
T Consensus       175 -----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~~---~~~~  230 (271)
T 4iin_A          175 -----------------GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE----LKA---DYVK  230 (271)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------------CGG
T ss_pred             -----------------CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH----HHH---HHHh
Confidence                             3457999999999999999877   689999999999987753321100    000   0000


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ..          ..+.+.+++|+|+++.+++....  ..| .+++.+.
T Consensus       231 ~~----------~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG  268 (271)
T 4iin_A          231 NI----------PLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGG  268 (271)
T ss_dssp             GC----------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cC----------CcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCC
Confidence            11          22347799999999999987643  344 4555543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.91  E-value=8.1e-24  Score=183.95  Aligned_cols=220  Identities=16%  Similarity=0.156  Sum_probs=153.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..+. .....  ...++.++.+|++|.+++.++++       ++
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAAD--LGKDVFVFSANLSDRKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--HCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--hCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            3568999999999999999999999999999999976544 22211  12478999999999998887765       68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||..........+.++|  ...+++|+.++..+++++..    .+ .++||++||...+.+.+           
T Consensus       103 D~lvnnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~-----------  168 (266)
T 3grp_A          103 DILVNNAGITRDGLFVRMQDQDW--DDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNP-----------  168 (266)
T ss_dssp             CEEEECCCCC-----CCCHHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC------------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCCC-----------
Confidence            99999999865543334444444  57899999997777776643    34 57999999987554321           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.||.+.+.+.+.++.+   .++++..++||.|.++......+.    ....+...   . 
T Consensus       169 --------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~----~~~~~~~~---~-  226 (266)
T 3grp_A          169 --------------GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEK----QKEAIMAM---I-  226 (266)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHH----HHHHHHTT---C-
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHH----HHHHHHhc---C-
Confidence                          3357999999999999998876   479999999999988643221111    11111111   1 


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                               ..+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       227 ---------p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3grp_A          227 ---------PMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG  262 (266)
T ss_dssp             ---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---------CCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence                     12236789999999999987543  244 4566543

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.91  E-value=1.6e-23  Score=184.46  Aligned_cols=246  Identities=17%  Similarity=0.140  Sum_probs=162.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-------------ccc-cccCCCCCeEEEEccCCCcchHH
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-------------QIF-SKWTRSDRLRLFQADLQVEGSFD   74 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-------------~~~-~~~~~~~~~~~~~~Dl~d~~~~~   74 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+....             ... .......++.++.+|++|.+++.
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            4578999999999999999999999999999999873211             000 01112357889999999999887


Q ss_pred             Hhhc-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCC
Q 035965           75 KAVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDS  146 (348)
Q Consensus        75 ~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~  146 (348)
                      ++++       ++|+|||+||......  ..+.++|  ...+++|+.++.++++++... ....+||++||...+.+...
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  163 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPLGA--HLPVQAF--ADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQ  163 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCT--TCCTHHH--HHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHC
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCcccC--cCCHHHH--HHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccc
Confidence            7765       7899999999865442  2333444  588999999999999999865 22468999999876654433


Q ss_pred             CCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHh
Q 035965          147 SGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLS  223 (348)
Q Consensus       147 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~  223 (348)
                           .+..|..+.         ++...|+.||.+.+.+.+.++.+.   ++++..++||.|.++.....  .....+..
T Consensus       164 -----~~~~~~~~~---------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~  227 (287)
T 3pxx_A          164 -----PPGAGGPQG---------PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSA--PMYRQFRP  227 (287)
T ss_dssp             -----CC-----CH---------HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSH--HHHHHHCT
T ss_pred             -----cccccccCC---------CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc--chhhhhcc
Confidence                 122222211         134679999999999999998874   89999999999998864421  00000000


Q ss_pred             hhcCCCCccc-cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          224 PITGDSKFFS-ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       224 ~~~~~~~~~~-~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .... ..... ...........+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       228 ~~~~-~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG  282 (287)
T 3pxx_A          228 DLEA-PSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG  282 (287)
T ss_dssp             TSSS-CCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccc-chhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECch
Confidence            0000 00000 00000000012458899999999999986542  344 4566543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.91  E-value=5.8e-24  Score=182.99  Aligned_cols=223  Identities=18%  Similarity=0.132  Sum_probs=160.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       +
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI--GKKARAIAADISDPGSVKALFAEIQALTGG   80 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            35678999999999999999999999999999999986544 222111  2478899999999998887765       6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||+||........+.+.++|  ...+++|+.++.++++++.    +.+...+||++||...+.+.+          
T Consensus        81 id~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  148 (247)
T 3rwb_A           81 IDILVNNASIVPFVAWDDVDLDHW--RKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP----------  148 (247)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC----------
Confidence            899999999865544334444555  5789999999999999843    333357999999987544321          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     ....|+.||.+.+.+.+.++.+   +++++..++||.|..+............+....      .
T Consensus       149 ---------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~------~  207 (247)
T 3rwb_A          149 ---------------NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML------Q  207 (247)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH------S
T ss_pred             ---------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc------c
Confidence                           3357999999999999999877   589999999999987632211000000000000      0


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~~  275 (348)
                                ..+.+..++|+|+++.+++....  ..|. +++.+.
T Consensus       208 ----------~~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  243 (247)
T 3rwb_A          208 ----------AMKGKGQPEHIADVVSFLASDDARWITGQTLNVDAG  243 (247)
T ss_dssp             ----------SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----------ccCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence                      12226689999999999987643  3454 555443

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=3.5e-24  Score=189.23  Aligned_cols=242  Identities=17%  Similarity=0.134  Sum_probs=164.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCC---CeEEEEccCCCcchHHHhhc-----
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSD---RLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~---~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..+. .... +.....   ++.++.+|++|.+++.++++     
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            3468999999999999999999999999999999986543 2111 111112   68899999999998887765     


Q ss_pred             --CCCEEEEccccCcccc--ccccccccchhhhhhhhhHHHHHHHHHHHhhcC--CcceEEEeccceeeeecCCCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDI--NVKDNIETYVQSTVINPAIQSTLNLLKACLKSE--SVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~--~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                        ++|+|||+||......  ..+.+.++|  ...+++|+.++.++++++...-  ..++||++||...+.+...      
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~------  175 (297)
T 1xhl_A          104 FGKIDILVNNAGANLADGTANTDQPVELY--QKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS------  175 (297)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT------
T ss_pred             cCCCCEEEECCCcCcCCCCccccCCHHHH--HHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCC------
Confidence              6899999999754332  223333444  5789999999999999887531  1179999999865432100      


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCC-Cch----HHHHHhh
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSV-PSS----IQVLLSP  224 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~-~~~----~~~~~~~  224 (348)
                                        +...|+.+|.+.+.+.+.++.+   .|++++.++||.|.++...... ...    .......
T Consensus       176 ------------------~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  237 (297)
T 1xhl_A          176 ------------------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGS  237 (297)
T ss_dssp             ------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred             ------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHH
Confidence                              3357999999999999998865   5899999999999887422110 000    0001111


Q ss_pred             hcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC---CCCc-eEEEecc-CcChHHHHHHHHHh
Q 035965          225 ITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND---RAQG-QYICCVK-SCPISEFIDHLKLE  289 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~---~~~~-~y~~~~~-~~s~~el~~~i~~~  289 (348)
                      ...   ..+          .+.+..++|+|+++++++...   ...| .+++.+. ...+.+.+..+.+.
T Consensus       238 ~~~---~~p----------~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          238 RKE---CIP----------VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             CTT---TCT----------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred             HHh---cCC----------CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence            110   111          123779999999999998754   3344 5666544 55666654444443

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.91  E-value=2.7e-23  Score=180.51  Aligned_cols=220  Identities=15%  Similarity=0.102  Sum_probs=155.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +++|+||||||+|+||++++++|+++|++|++++|+..+         ..++.++.+|++|.+++.++++       ++|
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   76 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG---------EAKYDHIECDVTNPDQVKASIDHIFKEYGSIS   76 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC---------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc---------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            557899999999999999999999999999999997653         1367889999999998887765       699


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      +|||+||........+.+.++|  ...+++|+.++.++++++...   ...++||++||...+.+.+             
T Consensus        77 ~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------  141 (264)
T 2dtx_A           77 VLVNNAGIESYGKIESMSMGEW--RRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK-------------  141 (264)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT-------------
T ss_pred             EEEECCCCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC-------------
Confidence            9999999765433223333344  578999999999988887642   1257999999987543211             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCC--CcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC-----c
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENK--IDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK-----F  231 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-----~  231 (348)
                                  +...|+.||.+.+.+.+.++.+.+  ++++.++|+.+.++....        +.....+...     .
T Consensus       142 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~--------~~~~~~~~~~~~~~~~  201 (264)
T 2dtx_A          142 ------------NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRK--------AAELEVGSDPMRIEKK  201 (264)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHH--------HHHHHHCSCHHHHHHH
T ss_pred             ------------CchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhh--------hhhcccccCchhhHHH
Confidence                        345799999999999999987754  999999999997653110        0000000000     0


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ......   ....+.+++++|+|+++++++....  ..| .+++.+.
T Consensus       202 ~~~~~~---~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (264)
T 2dtx_A          202 ISEWGH---EHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGG  245 (264)
T ss_dssp             HHHHHH---HSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHh---cCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            000000   0122348899999999999987642  344 4555543

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.91  E-value=1.8e-23  Score=181.16  Aligned_cols=226  Identities=18%  Similarity=0.110  Sum_probs=154.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cc-ccccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++++..+.  .. ..+.....++.++.+|++|.+++.++++      
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            45678999999999999999999999999999986544332  11 1111223568899999999998887775      


Q ss_pred             -CCCEEEEccccC-ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCccc
Q 035965           79 -GCDGVFHVAASM-EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 -~~d~Vih~a~~~-~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                       ++|++||+||.. ......+.+.++|  ...+++|+.++.++++++...- ...+||++||...+... .         
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~---------  152 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFW--HQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG-G---------  152 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC-S---------
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC-C---------
Confidence             689999999865 3222223333444  5789999999999999998652 13589999998754111 1         


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCC--CcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENK--IDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    ++...|+.||.+.+.+.+.++.+.+  +++..++||.|..+.......   ........   ... 
T Consensus       153 --------------~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~---~~~-  211 (259)
T 3edm_A          153 --------------PGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK---PEVRERVA---GAT-  211 (259)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC--------------------------
T ss_pred             --------------CCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC---hHHHHHHH---hcC-
Confidence                          1345799999999999999987743  999999999998875332110   00000000   001 


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QG-QYICCVK  275 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  275 (348)
                               ..+.+.+++|+|+++++++.....  .| .+++.+.
T Consensus       212 ---------p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg  247 (259)
T 3edm_A          212 ---------SLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGG  247 (259)
T ss_dssp             ------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBC
T ss_pred             ---------CCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence                     123377999999999999876432  44 5677655

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.91  E-value=1.8e-23  Score=179.96  Aligned_cols=214  Identities=18%  Similarity=0.149  Sum_probs=149.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .+++|+|+||||+|+||++++++|+++|++|++++|+..+.         ..+..+.+|++|.+++.++++       ++
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   82 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP---------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPV   82 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC---------TTSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH---------HHhcCeeccCCCHHHHHHHHHHHHHHcCCC
Confidence            45678999999999999999999999999999999976543         122248899999988877765       58


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||........+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+.+           
T Consensus        83 d~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----------  148 (247)
T 1uzm_A           83 EVLVSNAGLSADAFLMRMTEEKF--EKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIG-----------  148 (247)
T ss_dssp             SEEEEECSCCC-----CCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC----------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCCC-----------
Confidence            99999999765432223333344  57899999999999998764    34 67999999987554321           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.||.+.+.+.+.++.+   .+++++.++|+.+.++..... .   .........   ..+
T Consensus       149 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~---~~~~~~~~~---~~p  207 (247)
T 1uzm_A          149 --------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL-D---ERIQQGALQ---FIP  207 (247)
T ss_dssp             --------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS-C---HHHHHHHGG---GCT
T ss_pred             --------------CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc-C---HHHHHHHHh---cCC
Confidence                          2357999999999999998876   489999999999976531110 0   000010000   011


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                                .+.+++++|+|+++++++....  ..| .+++.+.
T Consensus       208 ----------~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG  242 (247)
T 1uzm_A          208 ----------AKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG  242 (247)
T ss_dssp             ----------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----------CCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCC
Confidence                      1237899999999999987532  244 4565543

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.91  E-value=1.7e-23  Score=183.01  Aligned_cols=225  Identities=18%  Similarity=0.122  Sum_probs=158.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       ++
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--GCGAAACRVDVSDEQQIIAMVDACVAAFGGV  104 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999999986544 222111  2468899999999998877665       68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |++||+||........+.+.++|  ...+++|+.++.++++++..    .+ ..+||++||...+.+.+           
T Consensus       105 D~lvnnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~-----------  170 (277)
T 3gvc_A          105 DKLVANAGVVHLASLIDTTVEDF--DRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVAVG-----------  170 (277)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT-----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCC-----------
Confidence            99999999865544334444445  57899999999999998764    33 57899999987543211           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC-Ccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS-KFF  232 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~  232 (348)
                                    +...|+.||.+.+.+.+.++.+   +++++..++||.|+++....        ......+.. ...
T Consensus       171 --------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--------~~~~~~~~~~~~~  228 (277)
T 3gvc_A          171 --------------GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQT--------AMAMFDGALGAGG  228 (277)
T ss_dssp             --------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH--------HHTCC------CC
T ss_pred             --------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHH--------hhhcchhhHHHHh
Confidence                          3457999999999999988876   58999999999998873211        000000000 000


Q ss_pred             cc-ccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          233 SI-LSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       233 ~~-~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .. ....    ..+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       229 ~~~~~~~----~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  271 (277)
T 3gvc_A          229 ARSMIAR----LQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGG  271 (277)
T ss_dssp             HHHHHHH----HHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhhhhhc----cccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCc
Confidence            00 0000    11237799999999999987543  344 4666543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=1.1e-23  Score=184.84  Aligned_cols=228  Identities=18%  Similarity=0.158  Sum_probs=157.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCC---CeEEEEccCCCcchHHHhhc-----
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSD---RLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~---~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..+. .... +.....   ++.++.+|++|.+++.++++     
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999986543 2211 111112   68899999999998877765     


Q ss_pred             --CCCEEEEccccCcccc----ccccccccchhhhhhhhhHHHHHHHHHHHhhcC--CcceEEEeccceeeeecCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDI----NVKDNIETYVQSTVINPAIQSTLNLLKACLKSE--SVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                        ++|+|||+||......    ..+.+.++|  ...+++|+.++.++++++...-  ..++||++||...+.+...    
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  157 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIY--HKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQP----  157 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCC----
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCC----
Confidence              6899999999754322    223333334  5789999999999999887531  0179999999865432101    


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCC-Cch----HHHHH
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSV-PSS----IQVLL  222 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~-~~~----~~~~~  222 (348)
                                          +...|+.||.+.+.+.+.++.+   ++++++.++|+.|+++...... ...    .....
T Consensus       158 --------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  217 (280)
T 1xkq_A          158 --------------------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFM  217 (280)
T ss_dssp             --------------------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHH
T ss_pred             --------------------cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHH
Confidence                                3457999999999999998865   5899999999999987422110 000    00011


Q ss_pred             hhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC---CCCc-eEEEecc
Q 035965          223 SPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND---RAQG-QYICCVK  275 (348)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~---~~~~-~y~~~~~  275 (348)
                      .....   ..+          .+.+.+++|+|+++++++..+   ...| .+++.+.
T Consensus       218 ~~~~~---~~p----------~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG  261 (280)
T 1xkq_A          218 ASHKE---CIP----------IGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG  261 (280)
T ss_dssp             HHCTT---TCT----------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHHc---CCC----------CCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence            11111   111          123779999999999998754   2344 4566544

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.91  E-value=4.3e-24  Score=185.69  Aligned_cols=234  Identities=17%  Similarity=0.134  Sum_probs=159.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       +
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999999999999999986543 2211 11223578999999999998887765       6


Q ss_pred             CCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhcC--CcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           80 CDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE--SVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        80 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      +|++||+|+.... ....+.+.++|  ...+++|+.++.++++++...-  ...+||++||...+.+.+           
T Consensus        89 id~lv~nAg~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  155 (264)
T 3ucx_A           89 VDVVINNAFRVPSMKPFANTTFEHM--RDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQA-----------  155 (264)
T ss_dssp             CSEEEECCCSCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCT-----------
T ss_pred             CcEEEECCCCCCCCCCchhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCC-----------
Confidence            8999999987532 22223334444  5789999999999999876431  126999999987543221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.||.+.+.+.+.++.+   +++++..++||.|+++....    ........ .+.... .
T Consensus       156 --------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~----~~~~~~~~-~~~~~~-~  215 (264)
T 3ucx_A          156 --------------KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKS----YFEHQAGK-YGTSVE-D  215 (264)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHH----HHHHHHHH-TTCCHH-H
T ss_pred             --------------ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHH----HHHhhhhh-cCCCHH-H
Confidence                          3357999999999999999877   68999999999998874221    00000000 000000 0


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ...........+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       216 ~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  260 (264)
T 3ucx_A          216 IYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCG  260 (264)
T ss_dssp             HHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhccCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            00000011123447899999999999987543  344 4566543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.91  E-value=2e-23  Score=181.85  Aligned_cols=221  Identities=16%  Similarity=0.151  Sum_probs=157.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC-cc-c-cccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG-KL-Q-IFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~-~~-~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+|+||||+|+||++++++|+++|++|+++.++.. +. . ...+.....++.++.+|++|.+++.++++       
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            45689999999999999999999999999987765432 22 1 11111223578999999999998887765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh-----hcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL-----KSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      .+|+|||+||..........+.++|  ...+++|+.++.++++++.     +.+ ..+||++||...+.+.+        
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  172 (267)
T 4iiu_A          104 AWYGVVSNAGIARDAAFPALSNDDW--DAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVMGNR--------  172 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHHCCT--------
T ss_pred             CccEEEECCCCCCCCccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhccCCC--------
Confidence            7899999999865543333334444  5789999999999999874     333 57999999987654322        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +...|+.+|.+.+.+.+.++.+.   ++++..++||.|.++..... +   ..........  
T Consensus       173 -----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~---~~~~~~~~~~--  229 (267)
T 4iiu_A          173 -----------------GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-E---SALKEAMSMI--  229 (267)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-H---HHHHHHHHTC--
T ss_pred             -----------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-H---HHHHHHHhcC--
Confidence                             33579999999999988887764   79999999999998865432 1   1111111111  


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                        +          .+.+.+++|+|+++.+++....  ..| .+++.++
T Consensus       230 --p----------~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          230 --P----------MKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             --T----------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --C----------CCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence              1          1226799999999999987543  344 4566543

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.91  E-value=1e-23  Score=182.66  Aligned_cols=223  Identities=17%  Similarity=0.143  Sum_probs=154.6

Q ss_pred             cCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc------C
Q 035965            6 ESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM------G   79 (348)
Q Consensus         6 ~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~   79 (348)
                      .+.+++|++|||||+|+||++++++|+++|++|++++|+..+. ...   ...++.++.+|++|.+++.++++      +
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~   79 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV-VAD---LGDRARFAAADVTDEAAVASALDLAETMGT   79 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH-HHH---TCTTEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH-HHh---cCCceEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            3456678999999999999999999999999999999965433 111   12478999999999998887775      7


Q ss_pred             CCEEEEccccCcccccc----ccccccchhhhhhhhhHHHHHHHHHHHhhc-----------CCcceEEEeccceeeeec
Q 035965           80 CDGVFHVAASMEFDINV----KDNIETYVQSTVINPAIQSTLNLLKACLKS-----------ESVKRVVLTSSVSTITAK  144 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~----~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----------~~~~~~v~~SS~~~~~~~  144 (348)
                      +|++||+||........    ..+.++|  ...+++|+.++..+++++...           +...+||++||...+.+.
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tl3_A           80 LRIVVNCAGTGNAIRVLSRDGVFSLAAF--RKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ  157 (257)
T ss_dssp             EEEEEECGGGSHHHHHHHHTCCCSHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH
T ss_pred             CCEEEECCCCCCCcccccccccCCHHHH--HHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC
Confidence            99999999975432110    1223333  588999999999999988743           224689999998754321


Q ss_pred             CCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHH
Q 035965          145 DSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVL  221 (348)
Q Consensus       145 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~  221 (348)
                      .                         +...|+.||.+.+.+.+.++.+   .++++..++||.|..+......+.    .
T Consensus       158 ~-------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~  208 (257)
T 3tl3_A          158 I-------------------------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEE----A  208 (257)
T ss_dssp             H-------------------------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHH----H
T ss_pred             C-------------------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHH----H
Confidence            1                         2357999999999999998876   479999999999988754331111    1


Q ss_pred             HhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCce-EEEecc
Q 035965          222 LSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQ-YICCVK  275 (348)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~-y~~~~~  275 (348)
                      ......   ..+..         +.+.+++|+|++++++++.+...|. +++.+.
T Consensus       209 ~~~~~~---~~~~~---------~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG  251 (257)
T 3tl3_A          209 RASLGK---QVPHP---------SRLGNPDEYGALAVHIIENPMLNGEVIRLDGA  251 (257)
T ss_dssp             HHHHHH---TSSSS---------CSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHh---cCCCC---------CCccCHHHHHHHHHHHhcCCCCCCCEEEECCC
Confidence            111111   11100         2277999999999999988666665 455443

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.91  E-value=3e-23  Score=182.44  Aligned_cols=225  Identities=15%  Similarity=0.070  Sum_probs=155.7

Q ss_pred             CCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+||||||+  |+||+++++.|+++|++|++++|+.... ....+....+++.++.+|++|.+++.++++       
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            345789999999  9999999999999999999999976411 111111111247889999999998887765       


Q ss_pred             CCCEEEEccccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhcC--CcceEEEeccceeeeecCCCCCCCC
Q 035965           79 GCDGVFHVAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE--SVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      ++|+|||+||....    ......+.++|  ...+++|+.++.++++++...-  ..++||++||...+.+.+       
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  169 (285)
T 2p91_A           99 SLDIIVHSIAYAPKEEFKGGVIDTSREGF--KIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP-------  169 (285)
T ss_dssp             CCCEEEECCCCCCGGGGSSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT-------
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCC-------
Confidence            68999999997643    11112223333  5789999999999999997652  137999999976543211       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        +...|+.||.+.+.+.+.++.+   .+++++.++||.|+++..... ... ..+...+... 
T Consensus       170 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~-~~~~~~~~~~-  228 (285)
T 2p91_A          170 ------------------HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI-TGF-HLLMEHTTKV-  228 (285)
T ss_dssp             ------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C-TTH-HHHHHHHHHH-
T ss_pred             ------------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc-cch-HHHHHHHHhc-
Confidence                              2346999999999999998876   489999999999999864321 111 1111111100 


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                        .+ .+         .+.+++|+|+++++++....  ..| .|++.+.
T Consensus       229 --~p-~~---------~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg  265 (285)
T 2p91_A          229 --NP-FG---------KPITIEDVGDTAVFLCSDWARAITGEVVHVDNG  265 (285)
T ss_dssp             --ST-TS---------SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             --CC-CC---------CCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence              11 11         26689999999999987533  234 4666543

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.91  E-value=1.5e-23  Score=182.61  Aligned_cols=227  Identities=16%  Similarity=0.084  Sum_probs=155.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccC--CCCCeEEEEccCCCcchHHHhhc-----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWT--RSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .+++|+++||||+|+||++++++|+++|++|++++|+..+. .... +..  ...++.++.+|++|.+++.++++     
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999986543 2111 100  13468899999999998887765     


Q ss_pred             --CCCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCC
Q 035965           79 --GCDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 --~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                        ++|+|||+||.... ....+.+.++|  ...+++|+.++..+++++.    +.+ .++||++||...+.+.+      
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  160 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEF--DKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIG------  160 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCS------
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCCC------
Confidence              68999999997543 22222333334  5789999999887766653    344 67999999987543211      


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCC----CCchHHHHHhh
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSS----VPSSIQVLLSP  224 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~----~~~~~~~~~~~  224 (348)
                                         +...|+.||.+.+.+.+.++.+   .+++++.++||.|+++.....    .+.........
T Consensus       161 -------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  221 (267)
T 1iy8_A          161 -------------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEE  221 (267)
T ss_dssp             -------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHH
T ss_pred             -------------------CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHH
Confidence                               3457999999999999988876   489999999999988632100    00000000000


Q ss_pred             hcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          225 ITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      +...   .          ..+.+.+++|+|+++++++..+.  ..| .+.+.+.
T Consensus       222 ~~~~---~----------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG  262 (267)
T 1iy8_A          222 FIQV---N----------PSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG  262 (267)
T ss_dssp             HHTT---C----------TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             Hhcc---C----------CCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            0000   1          12237799999999999987642  344 4555443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.91  E-value=7e-24  Score=183.34  Aligned_cols=216  Identities=15%  Similarity=0.060  Sum_probs=152.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCe-EEEEEcCCCcc---ccccccCCCCCeEEEEccCCCc-chHHHhhc-----
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYI-VHATVRDPGKL---QIFSKWTRSDRLRLFQADLQVE-GSFDKAVM-----   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~-V~~~~r~~~~~---~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~-----   78 (348)
                      +++|+|+||||+|+||++++++|+++|++ |++++|+....   .+.... ...++.++.+|++|. +++.++++     
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN-PKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC-TTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhC-CCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            55789999999999999999999999996 99999976422   111111 123688999999998 77776664     


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC------CcceEEEeccceeeeecCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE------SVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~------~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                        ++|+|||+||......         . ...+++|+.++.++++++...-      ...+||++||...+.+.+     
T Consensus        82 ~g~id~lv~~Ag~~~~~~---------~-~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  146 (254)
T 1sby_A           82 LKTVDILINGAGILDDHQ---------I-ERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH-----  146 (254)
T ss_dssp             HSCCCEEEECCCCCCTTC---------H-HHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-----
T ss_pred             cCCCCEEEECCccCCHHH---------H-hhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC-----
Confidence              7899999999753211         3 4889999999999999886431      136899999987543211     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          +...|+.||.+.|.+.+.++.+   .+++++.++||.|.++..... ..+.       ..
T Consensus       147 --------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~-------~~  198 (254)
T 1sby_A          147 --------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF-NSWL-------DV  198 (254)
T ss_dssp             --------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC-CCGG-------GS
T ss_pred             --------------------CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcccccc-chhh-------hh
Confidence                                3357999999999999998876   589999999999988742211 0000       00


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVK  275 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~  275 (348)
                      ..........       ..+.+++|+|++++.+++....+..|++.+.
T Consensus       199 ~~~~~~~~~~-------~~~~~~~dvA~~i~~~~~~~~~G~~~~v~gG  239 (254)
T 1sby_A          199 EPRVAELLLS-------HPTQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             CTTHHHHHTT-------SCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             hHHHHHHHhc-------CCCCCHHHHHHHHHHHHHcCCCCCEEEEeCC
Confidence            0000000001       1255999999999999876544556776543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=4.1e-23  Score=177.47  Aligned_cols=218  Identities=18%  Similarity=0.161  Sum_probs=155.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|+++||||+|+||++++++|+++|++|++++|+..+. ......    ++.++.+|++|.+++.++++       ++
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----GAHPVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999999986543 222111    37889999999998877765       48


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      |+|||+||........+.+.++|  ...+++|+.++.++++++...   ...++||++||.. +.+.+            
T Consensus        79 d~lvn~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~------------  143 (245)
T 1uls_A           79 DGVVHYAGITRDNFHWKMPLEDW--ELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNL------------  143 (245)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHH--HHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCT------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCC------------
Confidence            99999999765433233333444  578999999999998887643   1267999999987 43221            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   ....|+.+|.+.+.+.+.++.+   .+++++.++||.|..+..... ....  .......    .+ 
T Consensus       144 -------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~--~~~~~~~----~p-  202 (245)
T 1uls_A          144 -------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-PEKV--REKAIAA----TP-  202 (245)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-CHHH--HHHHHHT----CT-
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-CHHH--HHHHHhh----CC-
Confidence                         2347999999999999988766   489999999999988753321 1110  1111111    11 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCVK  275 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~~  275 (348)
                      .++         +++++|+|+++++++....  ..|. +.+.+.
T Consensus       203 ~~~---------~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  237 (245)
T 1uls_A          203 LGR---------AGKPLEVAYAALFLLSDESSFITGQVLFVDGG  237 (245)
T ss_dssp             TCS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCC---------CcCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            111         6799999999999987542  3454 555443

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.91  E-value=9.8e-24  Score=183.43  Aligned_cols=217  Identities=17%  Similarity=0.122  Sum_probs=154.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+....         .....+.+|++|.+++.++++       ++|
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~---------~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD   96 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI---------AADLHLPGDLREAAYADGLPGAVAAGLGRLD   96 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS---------CCSEECCCCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---------HhhhccCcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4568999999999999999999999999999999976543         112345799999988776654       689


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ++||+||........+.+.++|  ...+++|+.++.++++++    ++.+ .++||++||...+.+.+            
T Consensus        97 ~lvnnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------------  161 (266)
T 3uxy_A           97 IVVNNAGVISRGRITETTDADW--SLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPGP------------  161 (266)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCCT------------
T ss_pred             EEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCC------------
Confidence            9999999876544334444444  578999999999999998    3444 57999999987543211            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCC---CCchHHHHHhhhcCCCCc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSS---VPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~  231 (348)
                                   +...|+.||.+.+.+.+.++.+.   ++++..++||.|.++.....   ...........+.     
T Consensus       162 -------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-----  223 (266)
T 3uxy_A          162 -------------GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELG-----  223 (266)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHH-----
T ss_pred             -------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHH-----
Confidence                         34579999999999999998774   89999999999988632110   0000000000000     


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                              .....+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       224 --------~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3uxy_A          224 --------RTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGG  262 (266)
T ss_dssp             --------TTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --------hcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence                    01123447899999999999998653  234 4566543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.91  E-value=8.6e-24  Score=183.00  Aligned_cols=223  Identities=16%  Similarity=0.139  Sum_probs=156.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc-CCCcc-c-cccccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVR-DPGKL-Q-IFSKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r-~~~~~-~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      ...+|+||||||+|+||++++++|+++|++|+++++ +..+. . .........++.++.+|++|.+++.++++      
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            446789999999999999999999999999999884 43332 1 11111223478899999999998887765      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       ++|+|||+||........+.+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+..        
T Consensus        90 g~id~lv~~Ag~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  158 (256)
T 3ezl_A           90 GEIDVLVNNAGITRDVVFRKMTREDW--QAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQF--------  158 (256)
T ss_dssp             CCEEEEEECCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSCS--------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCCC--------
Confidence             6899999999865544334444444  5789999999888877764    344 57999999987543221        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +...|+.||.+.+.+.+.++.+   .++++..++||.|.++......+....   .....   
T Consensus       159 -----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~~~---  215 (256)
T 3ezl_A          159 -----------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLE---KIVAT---  215 (256)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHH---HHHHH---
T ss_pred             -----------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHH---HHHhc---
Confidence                             3457999999999999998876   579999999999987643221111111   11111   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                       .          ..+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       216 -~----------~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG  252 (256)
T 3ezl_A          216 -I----------PVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG  252 (256)
T ss_dssp             -S----------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -C----------CCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence             1          12237799999999999886532  344 4666543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.91  E-value=1.2e-23  Score=181.53  Aligned_cols=213  Identities=15%  Similarity=0.136  Sum_probs=147.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------~   79 (348)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++      +
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            45678999999999999999999999999999999987654 2221 11123478999999999999888776      6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||+||........+.+.++|  ...+++|+.++..+++++..    .+ .++||++||...+.+.+          
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  150 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVF--RKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGGS----------  150 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCCT----------
T ss_pred             ceEEEECCCcCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCCC----------
Confidence            899999999866544334444445  57899999999999988743    34 57999999987543221          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcE-EEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDL-VSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~-~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                     ....|+.||.+.+.+.+.++.+   .++++ ..+.||.|..+......+..    ..       .
T Consensus       151 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~----~~-------~  204 (252)
T 3h7a_A          151 ---------------GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQM----FG-------K  204 (252)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------
T ss_pred             ---------------CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhh----hh-------h
Confidence                           3357999999999999998876   47999 89999998776433211100    00       0


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCCC
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA  266 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~  266 (348)
                      +.      .....+ ++.++|+|+++++++..+..
T Consensus       205 ~~------~~~~~~-~~~pedvA~~~~~l~s~~~~  232 (252)
T 3h7a_A          205 DA------LANPDL-LMPPAAVAGAYWQLYQQPKS  232 (252)
T ss_dssp             ----------------CCHHHHHHHHHHHHHCCGG
T ss_pred             hh------hcCCcc-CCCHHHHHHHHHHHHhCchh
Confidence            00      001123 88999999999999986643

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.91  E-value=9.8e-24  Score=183.58  Aligned_cols=225  Identities=16%  Similarity=0.079  Sum_probs=159.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccC-CCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWT-RSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..+. .... +.. ...++.++.+|++|.+++.++++       
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4568999999999999999999999999999999986543 2111 101 13478999999999998887765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|++||+||........+.+.++|  ...+++|+.++.++++++...    +...+||++||...+.+.+         
T Consensus        98 ~id~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  166 (266)
T 4egf_A           98 GLDVLVNNAGISHPQPVVDTDPQLF--DATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP---------  166 (266)
T ss_dssp             SCSEEEEECCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT---------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC---------
Confidence            6899999999866544334444445  578999999999999988643    2246999999987543221         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      +...|+.+|.+.+.+.+.++.+   .++++..++|+.|..+........ ..........    
T Consensus       167 ----------------~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~----  225 (266)
T 4egf_A          167 ----------------DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD-EAKSAPMIAR----  225 (266)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS-HHHHHHHHTT----
T ss_pred             ----------------CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC-hHHHHHHHhc----
Confidence                            3357999999999999999877   489999999999987632110000 0001111111    


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ++          .+.+..++|+|+++++++....  ..| .+++.+.
T Consensus       226 ~p----------~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 4egf_A          226 IP----------LGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGG  262 (266)
T ss_dssp             CT----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC----------CCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCC
Confidence            11          2226689999999999987643  344 4566443

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.91  E-value=1.4e-23  Score=179.13  Aligned_cols=197  Identities=19%  Similarity=0.210  Sum_probs=140.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      ++|+|+||||+|+||++++++|+++|++|++++|+..+. .....   ..++.++.+|++|.+++.++++       ++|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAE---LEGALPLPGDVREEGDWARAVAAMEEAFGELS   80 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---STTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---hhhceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            467899999999999999999999999999999976543 22211   1268899999999988877664       689


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+||............++|  ...+++|+.++.++++.+    ++.+ .++||++||..++.+.             
T Consensus        81 ~li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-------------  144 (234)
T 2ehd_A           81 ALVNNAGVGVMKPVHELTLEEW--RLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPF-------------  144 (234)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCC-------------
T ss_pred             EEEECCCcCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCC-------------
Confidence            9999999754433223333333  578999999998666554    4455 6899999998643211             


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                  ++...|+.+|.+.+.+.+.++.+   .+++++++||+.+..+.....               +..   
T Consensus       145 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------------~~~---  194 (234)
T 2ehd_A          145 ------------KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT---------------PGQ---  194 (234)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------------------------------
T ss_pred             ------------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc---------------ccc---
Confidence                        13457999999999998888765   589999999999876532110               000   


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                         ..       +++++|+|+++++++..+.
T Consensus       195 ---~~-------~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          195 ---AW-------KLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             -------------CCHHHHHHHHHHHHHSCC
T ss_pred             ---cC-------CCCHHHHHHHHHHHhCCCc
Confidence               01       5689999999999998653

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.91  E-value=3.9e-23  Score=180.13  Aligned_cols=223  Identities=14%  Similarity=0.154  Sum_probs=158.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cc-ccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+++||||+|+||++++++|+++|++|++++++..+.  .. ........++.++.+|++|.+++.++++       
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3467899999999999999999999999999999654322  11 1111223578999999999998887765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|+|||+||..........+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+..         
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  170 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDW--DAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGAF---------  170 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT---------
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCCC---------
Confidence            7999999999865544333444444  57899999999999998754    33 57999999987553321         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      +...|+.||.+.+.+.+.++.+   .++++..++||.|..+........    .   ....  .
T Consensus       171 ----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~---~~~~--~  225 (269)
T 3gk3_A          171 ----------------GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD----V---LEAK--I  225 (269)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------------CC--S
T ss_pred             ----------------CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchh----H---HHHH--h
Confidence                            3357999999999999988876   479999999999988754431110    0   0000  0


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ..       ....+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       226 ~~-------~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG  265 (269)
T 3gk3_A          226 LP-------QIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGG  265 (269)
T ss_dssp             GG-------GCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred             hh-------cCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCC
Confidence            00       0112337799999999999987653  344 4666543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.91  E-value=1.3e-23  Score=181.84  Aligned_cols=230  Identities=16%  Similarity=0.086  Sum_probs=154.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +|+++||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       ++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            57899999999999999999999999999999976543 2111 11112468899999999998888775       799


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|||+||........+.+.++|  ...+++|+.++.++++++...    +..++||++||...+.+.+            
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  147 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIV--DKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP------------  147 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------------
T ss_pred             EEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC------------
Confidence            9999999754433223333334  578999999999988887653    2146999999986543211            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC-CCCccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG-DSKFFS  233 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~  233 (348)
                                   ....|+.||.+.+.+.+.++.+   .+++++.++||.|.++....    ....+...... ......
T Consensus       148 -------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~  210 (256)
T 1geg_A          148 -------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE----IDRQVSEAAGKPLGYGTA  210 (256)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH----HHHHHHHHHTCCTTHHHH
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhh----hhhhccccccCChHHHHH
Confidence                         3357999999999999998876   48999999999998863110    00000000000 000000


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCV  274 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  274 (348)
                      ....   ....+.+.+++|+|+++++++....  ..| .+.+.+
T Consensus       211 ~~~~---~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  251 (256)
T 1geg_A          211 EFAK---RITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDG  251 (256)
T ss_dssp             HHHT---TCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHh---cCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence            0000   0012237899999999999987642  344 455544

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.91  E-value=2.3e-23  Score=181.46  Aligned_cols=226  Identities=17%  Similarity=0.129  Sum_probs=158.7

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      ...++|+||||||+|+||++++++|+++|++|++++|+....        ...+.++.+|++|.+++.++++       +
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD--------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGR   81 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C--------TTSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc--------cCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            345689999999999999999999999999999999976532        1256788999999998887765       6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+||..........+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+..          
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  148 (269)
T 3vtz_A           82 IDILVNNAGIEQYSPLHLTPTEIW--RRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAATK----------  148 (269)
T ss_dssp             CCEEEECCCCCCCCCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCT----------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCC----------
Confidence            899999999865544334444444  57899999999999998764    33 57999999987654321          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                     ....|+.||.+.+.+.+.++.+.  ++++..++||.|.++....       ..............
T Consensus       149 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~-------~~~~~~~~~~~~~~  206 (269)
T 3vtz_A          149 ---------------NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIK-------AAKMEVGEDENAVE  206 (269)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHH-------HHHHHHCCSTTHHH
T ss_pred             ---------------CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhh-------hhhccccccchhhH
Confidence                           33579999999999999998875  7999999999998763210       00000000000000


Q ss_pred             -cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          234 -ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       234 -~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                       ....+......+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       207 ~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  252 (269)
T 3vtz_A          207 RKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG  252 (269)
T ss_dssp             HHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence             00000001123447799999999999987543  244 5666554

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.91  E-value=1e-23  Score=185.22  Aligned_cols=229  Identities=18%  Similarity=0.088  Sum_probs=157.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cc-ccccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..+.  .. ..+.....++.++.+|++|.+++.++++      
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF  105 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34568999999999999999999999999999999976432  11 1111123468899999999988877654      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                       ++|+|||+||........+.+.++|  ...+++|+.++.++++++... ...++||++||...+.+...          
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------  173 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEF--DRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP----------  173 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC----------
Confidence             6899999999765433223333444  578999999999999999875 22579999999764322111          


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCc--------hHHHHHhhh
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPS--------SIQVLLSPI  225 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~--------~~~~~~~~~  225 (348)
                                    +...|+.||.+.+.+.+.++.+   .++++++++||.|.++........        .........
T Consensus       174 --------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T 1g0o_A          174 --------------KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYA  239 (283)
T ss_dssp             --------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHH
T ss_pred             --------------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHH
Confidence                          2457999999999999998866   489999999999988631100000        000000000


Q ss_pred             cCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          226 TGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                      ...  ..          ..+.+.+++|+|+++++++....  ..|. +++.+
T Consensus       240 ~~~--~~----------p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdg  279 (283)
T 1g0o_A          240 AVQ--WS----------PLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDG  279 (283)
T ss_dssp             HHH--SC----------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhc--CC----------CCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            000  00          12237799999999999997543  3444 45544

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.91  E-value=3.9e-23  Score=176.99  Aligned_cols=217  Identities=21%  Similarity=0.179  Sum_probs=152.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~V   83 (348)
                      +|+++||||+|+||++++++|+++|++|++++|+..+.  ....    ++.++.+|++| +++.++++       ++|++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~--~~~~----~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~l   74 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA--AQSL----GAVPLPTDLEK-DDPKGLVKRALEALGGLHVL   74 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH--HHHH----TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHhh----CcEEEecCCch-HHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999986542  1111    27789999999 77766543       69999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ||+||........+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+...             
T Consensus        75 v~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~-------------  138 (239)
T 2ekp_A           75 VHAAAVNVRKPALELSYEEW--RRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGGP-------------  138 (239)
T ss_dssp             EECCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT-------------
T ss_pred             EECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCCC-------------
Confidence            99999765433233334444  57899999999999998853    34 679999999875432210             


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                ++...|+.||.+.+.+.+.++.+.   +++++.+||+.+.++.......  .......+...   .+   
T Consensus       139 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~---~p---  200 (239)
T 2ekp_A          139 ----------VPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQ--NPELYEPITAR---IP---  200 (239)
T ss_dssp             ----------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--CHHHHHHHHTT---CT---
T ss_pred             ----------CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcccc--CHHHHHHHHhc---CC---
Confidence                      144679999999999999988774   8999999999998874221000  00011111110   11   


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCVK  275 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~~  275 (348)
                             .+.+.+++|+|+++++++....  ..|. +.+.+.
T Consensus       201 -------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          201 -------MGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             -------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -------CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence                   1227799999999999987532  3454 455443

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.91  E-value=5.9e-24  Score=190.11  Aligned_cols=235  Identities=11%  Similarity=0.045  Sum_probs=167.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcC----------CCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhh
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRD----------PGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAV   77 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~----------~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~   77 (348)
                      ++|++|||||+|+||+++++.|+++|++|++++|+          .... ... .+.....++.++.+|++|.+++.+++
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            46789999999999999999999999999999986          2221 111 11112346888999999999888776


Q ss_pred             c-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC---------CcceEEEeccceee
Q 035965           78 M-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE---------SVKRVVLTSSVSTI  141 (348)
Q Consensus        78 ~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---------~~~~~v~~SS~~~~  141 (348)
                      +       ++|++||+||........+.+.++|  ...+++|+.++.++++++...-         ...+||++||...+
T Consensus       106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  183 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEF--DAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL  183 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence            5       7899999999866544334444444  5789999999999999876431         01599999998765


Q ss_pred             eecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchH
Q 035965          142 TAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSI  218 (348)
Q Consensus       142 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~  218 (348)
                      .+..                         ....|+.||.+.+.+.+.++.+   .++++..++|+ +..+..........
T Consensus       184 ~~~~-------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~  237 (322)
T 3qlj_A          184 QGSV-------------------------GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM  237 (322)
T ss_dssp             HCBT-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--
T ss_pred             cCCC-------------------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh
Confidence            4322                         2357999999999999999887   58999999999 65543322111000


Q ss_pred             HHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc------------------Cc
Q 035965          219 QVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK------------------SC  277 (348)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~------------------~~  277 (348)
                              .  .  . .       ..+.++.++|+|+++++++....  ..| .+++.+.                  .+
T Consensus       238 --------~--~--~-~-------~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~  297 (322)
T 3qlj_A          238 --------A--T--Q-D-------QDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARW  297 (322)
T ss_dssp             --------------------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCC
T ss_pred             --------h--c--c-c-------cccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCC
Confidence                    0  0  0 0       12236789999999999987543  234 4555432                  24


Q ss_pred             ChHHHHHHHHHhCCC
Q 035965          278 PISEFIDHLKLEYPS  292 (348)
Q Consensus       278 s~~el~~~i~~~~~~  292 (348)
                      ++.|+++.+.+.++.
T Consensus       298 ~~~el~~~~~~~~~~  312 (322)
T 3qlj_A          298 DPAELGPVVADLLGK  312 (322)
T ss_dssp             CGGGHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhhc
Confidence            789999999998874

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.91  E-value=1.5e-23  Score=182.43  Aligned_cols=225  Identities=17%  Similarity=0.061  Sum_probs=155.6

Q ss_pred             CCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+||||||+  |+||++++++|+++|++|++++|+.... ....+....+...++.+|++|.+++.++++       
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            345789999999  9999999999999999999999976211 111111111235789999999998887765       


Q ss_pred             CCCEEEEccccCcc----ccccc-cccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCC
Q 035965           79 GCDGVFHVAASMEF----DINVK-DNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 ~~d~Vih~a~~~~~----~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      ++|+|||+||....    ....+ .+.++|  ...+++|+.++.++++++...- ..++||++||...+.+.+       
T Consensus        87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-------  157 (265)
T 1qsg_A           87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGF--KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP-------  157 (265)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHH--HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-------
T ss_pred             CCCEEEECCCCCCccccCCCccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCC-------
Confidence            68999999997542    11111 223333  5789999999999999998652 136999999976543211       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        +...|+.||.+.+.+.+.++.+.   +++++.++|+.|+++..... .............  
T Consensus       158 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~--  216 (265)
T 1qsg_A          158 ------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAV--  216 (265)
T ss_dssp             ------------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHH--
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc-cccHHHHHHHHhc--
Confidence                              23479999999999999988774   89999999999999854321 1111111111111  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QG-QYICCVK  275 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~-~y~~~~~  275 (348)
                        .+          ...+.+++|+|+++++++.....  .| .+++.+.
T Consensus       217 --~p----------~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  253 (265)
T 1qsg_A          217 --TP----------IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  253 (265)
T ss_dssp             --ST----------TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             --CC----------CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCC
Confidence              01          11267999999999999875432  34 5666544

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.91  E-value=4.2e-23  Score=181.84  Aligned_cols=224  Identities=15%  Similarity=0.069  Sum_probs=159.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..+.  .... ......++.++.+|++|.+++.++++       
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999999999986532  1111 11223578899999999998887765       


Q ss_pred             CCCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           79 GCDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      ++|++||+||...... ..+.+.++|  ...+++|+.++.++++++... ....+||++||...+.+..           
T Consensus       125 ~iD~lvnnAg~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  191 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQQGLEYITAEQL--EKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE-----------  191 (291)
T ss_dssp             SCCEEEECCCCCCCCSSGGGCCHHHH--HHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT-----------
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC-----------
Confidence            6899999999754322 222233444  578999999999999999864 2246899999987654322           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    ....|+.||.+.+.+.+.++.+.   ++++..++||.|+++........   .....+..   .. 
T Consensus       192 --------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~---~~-  250 (291)
T 3ijr_A          192 --------------TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDE---KKVSQFGS---NV-  250 (291)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCH---HHHHHTTT---TS-
T ss_pred             --------------CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCH---HHHHHHHc---cC-
Confidence                          23579999999999999998774   89999999999998742110000   00011100   01 


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                               ..+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       251 ---------p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  286 (291)
T 3ijr_A          251 ---------PMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGG  286 (291)
T ss_dssp             ---------TTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             ---------CCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCC
Confidence                     23337799999999999987643  345 4566543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=1.1e-23  Score=183.85  Aligned_cols=203  Identities=11%  Similarity=0.018  Sum_probs=151.2

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +.+++|+|+||||+|+||+++++.|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++      
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            445678999999999999999999999999999999976543 2111 11112468999999999988877765      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       ++|+|||+||........+.+.++|  ...+++|+.++.++++++..    .+ .++||++||..++.+.+        
T Consensus       107 g~iD~li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~--------  175 (272)
T 1yb1_A          107 GDVSILVNNAGVVYTSDLFATQDPQI--EKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVP--------  175 (272)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHH--------
T ss_pred             CCCcEEEECCCcCCCcchhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCC--------
Confidence             6899999999765433222323333  47899999998888777653    44 68999999987543211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC------CCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN------KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                       +...|+.+|.+.|.+++.++.+.      +++++++||+.+.++....               
T Consensus       176 -----------------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~---------------  223 (272)
T 1yb1_A          176 -----------------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---------------  223 (272)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---------------
T ss_pred             -----------------CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc---------------
Confidence                             33579999999999999988763      7999999999998875221               


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                        ...+          .+.+++++|+|++++.++.++
T Consensus       224 --~~~~----------~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          224 --PSTS----------LGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             --THHH----------HCCCCCHHHHHHHHHHHHHTT
T ss_pred             --cccc----------ccCCCCHHHHHHHHHHHHHcC
Confidence              0000          112779999999999999875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.90  E-value=7.4e-23  Score=176.54  Aligned_cols=213  Identities=19%  Similarity=0.171  Sum_probs=149.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .+++|+|+||||+|+||+++++.|+++|++|++++|+..+.         +.+.++.+|++|.+++.++++       .+
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i   88 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP---------EGFLAVKCDITDTEQVEQAYKEIEETHGPV   88 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC---------TTSEEEECCTTSHHHHHHHHHHHHHHTCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh---------ccceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            34578999999999999999999999999999999976432         247889999999998877765       47


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+||........+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+.+           
T Consensus        89 D~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-----------  154 (253)
T 2nm0_A           89 EVLIANAGVTKDQLLMRMSEEDF--TSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGSA-----------  154 (253)
T ss_dssp             SEEEEECSCCTTTC---CCTTTT--HHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCHH-----------
T ss_pred             CEEEECCCCCCCCChhhCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCC-----------
Confidence            99999999764432222233334  57899999999999987764    24 57999999976432210           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.+|.+.+.+.+.++.+   .++++..++|+.|..+...........   .....    .+
T Consensus       155 --------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~---~~~~~----~p  213 (253)
T 2nm0_A          155 --------------GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRA---NIVSQ----VP  213 (253)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHH---HHHTT----CT
T ss_pred             --------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHH---HHHhc----CC
Confidence                          2347999999999999998876   479999999999977643211000000   00000    11


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                                ...+++++|+|+++++++..+.  ..|. +.+.+
T Consensus       214 ----------~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdG  247 (253)
T 2nm0_A          214 ----------LGRYARPEEIAATVRFLASDDASYITGAVIPVDG  247 (253)
T ss_dssp             ----------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ----------CCCCcCHHHHHHHHHHHhCccccCCcCcEEEECC
Confidence                      1227899999999999987643  2454 45544

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.90  E-value=2.3e-23  Score=180.63  Aligned_cols=212  Identities=16%  Similarity=0.148  Sum_probs=150.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       +
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4568999999999999999999999999999999986543 2211 11123468889999999998877764       6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||+||........+.+.++|  ...+++|+.++..+++++..    .+ .++||++||...+.+.+          
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~----------  148 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEW--ERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVVP----------  148 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCT----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccCC----------
Confidence            899999999865544334444445  57899999999988888754    33 57999999987543321          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC-CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN-KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                     ....|+.||.+.+.+.+.++.+. ++++..++||.|..+........          ....... 
T Consensus       149 ---------------~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~----------~~~~~~~-  202 (264)
T 3tfo_A          149 ---------------TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHE----------ETMAAMD-  202 (264)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-----------------------------
T ss_pred             ---------------CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccch----------hHHHHHH-
Confidence                           33579999999999999998875 89999999999987643221000          0000000 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCCC
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDRA  266 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~  266 (348)
                        .     ..+.++..+|+|+++++++..+..
T Consensus       203 --~-----~~~~~~~pedvA~~v~~l~s~~~~  227 (264)
T 3tfo_A          203 --T-----YRAIALQPADIARAVRQVIEAPQS  227 (264)
T ss_dssp             ------------CCCHHHHHHHHHHHHHSCTT
T ss_pred             --h-----hhccCCCHHHHHHHHHHHhcCCcc
Confidence              0     011256899999999999998765

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.90  E-value=3.5e-23  Score=178.82  Aligned_cols=224  Identities=17%  Similarity=0.132  Sum_probs=155.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       +
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--GERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999976543 221111  2468899999999998877665       4


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|+|||+||........+.+.++|  ...+++|+.++..+++++.    +.+  ++||++||...+.+.+          
T Consensus        81 id~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~----------  146 (253)
T 1hxh_A           81 LNVLVNNAGILLPGDMETGRLEDF--SRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPIE----------  146 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCCT----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHH--HHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCCC----------
Confidence            799999999765433223333444  5789999998887777554    334  7999999987543211          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---C--CCcEEEEecCccccCCCCCCC-CchHHHHHhhhcCCC
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---N--KIDLVSVITTTVAGPFLTSSV-PSSIQVLLSPITGDS  229 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~--~~~~~~lR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~  229 (348)
                                     +...|+.||.+.+.+.+.++.+   .  +++++++||+.|+++...... +....   ..+....
T Consensus       147 ---------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~~~  208 (253)
T 1hxh_A          147 ---------------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSK---EMVLHDP  208 (253)
T ss_dssp             ---------------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCH---HHHBCBT
T ss_pred             ---------------CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhH---HHHhhhh
Confidence                           3457999999999999998876   3  899999999999987421100 00000   0010100


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ...          ..+.+.+++|+|+++++++..+.  ..| .+++.+.
T Consensus       209 ~~~----------p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          209 KLN----------RAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             TTB----------TTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             ccC----------ccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            001          12238899999999999987643  344 4555544

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.90  E-value=1.8e-23  Score=181.50  Aligned_cols=220  Identities=18%  Similarity=0.161  Sum_probs=156.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|+++||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       .+
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL--EAEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC--CSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--cCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999999999999999999999999999999986543 221111  1468899999999998877765       57


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      |+|||+||........+.+.++|  ...+++|+.++.++++++...- ..++||++||...+ +.+              
T Consensus        82 D~lvnnAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~--------------  144 (263)
T 2a4k_A           82 HGVAHFAGVAHSALSWNLPLEAW--EKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAF--------------  144 (263)
T ss_dssp             CEEEEGGGGTTTTC----CHHHH--HHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHH--------------
T ss_pred             cEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCC--------------
Confidence            99999999765433233333444  5789999999999999987641 13699999998754 110              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                 +...|+.||.+.+.+.+.++.+   .|+++++++||.|.++..... ...  ........    .+ . 
T Consensus       145 -----------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~--~~~~~~~~----~p-~-  204 (263)
T 2a4k_A          145 -----------GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-PPW--AWEQEVGA----SP-L-  204 (263)
T ss_dssp             -----------HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-CHH--HHHHHHHT----ST-T-
T ss_pred             -----------CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-CHH--HHHHHHhc----CC-C-
Confidence                       2357999999999999988766   489999999999998754321 111  01111111    11 1 


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCVK  275 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~~  275 (348)
                              ..+++++|+|+++++++....  ..|. +.+.+.
T Consensus       205 --------~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG  238 (263)
T 2a4k_A          205 --------GRAGRPEEVAQAALFLLSEESAYITGQALYVDGG  238 (263)
T ss_dssp             --------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --------CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence                    126799999999999987643  3454 555444

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.90  E-value=3.2e-23  Score=180.02  Aligned_cols=205  Identities=19%  Similarity=0.167  Sum_probs=147.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +++++||||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       .
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            3468999999999999999999999999999999987644 2211 11123468899999999998877664       5


Q ss_pred             CCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           80 CDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        80 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +|+|||+||.... ......+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+..         
T Consensus       107 id~lv~~Ag~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  174 (262)
T 3rkr_A          107 CDVLVNNAGVGWFGGPLHTMKPAEW--DALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPVA---------  174 (262)
T ss_dssp             CSEEEECCCCCCCSSCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCCCT---------
T ss_pred             CCEEEECCCccCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCCC---------
Confidence            8999999997322 22223333334  57899999999999998754    34 67999999987543211         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      +...|+.+|.+.+.+++.++.+   .++++..++||.|..+.....            ...   
T Consensus       175 ----------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------------~~~---  223 (262)
T 3rkr_A          175 ----------------DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL------------SAK---  223 (262)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc------------ccc---
Confidence                            3457999999999999998876   589999999999876542210            000   


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCCC
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA  266 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~  266 (348)
                      .          ....++..+|+|+++.+++.....
T Consensus       224 ~----------~~~~~~~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          224 K----------SALGAIEPDDIADVVALLATQADQ  248 (262)
T ss_dssp             ---------------CCCHHHHHHHHHHHHTCCTT
T ss_pred             c----------ccccCCCHHHHHHHHHHHhcCccc
Confidence            0          112277999999999999987543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.90  E-value=4.9e-24  Score=186.24  Aligned_cols=225  Identities=16%  Similarity=0.103  Sum_probs=158.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~   80 (348)
                      +++|+++||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++      ++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i  110 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV  110 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            4578999999999999999999999999999999987654 2211 11223578999999999988887765      68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |++||+||........+.+.++|  ...+++|+.++.++++++..    .+ ..+||++||...+.+  .          
T Consensus       111 D~lvnnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~--~----------  175 (275)
T 4imr_A          111 DILVINASAQINATLSALTPNDL--AFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRP--K----------  175 (275)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSC--C----------
T ss_pred             CEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCC--C----------
Confidence            99999999765544334444445  57899999999999998843    34 579999999875431  1          


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                   .+...|+.||.+.+.+.+.++.+.   ++++..++||.|..+..................    ...
T Consensus       176 -------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~----~~~  238 (275)
T 4imr_A          176 -------------SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVR----TLN  238 (275)
T ss_dssp             -------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHH----HHS
T ss_pred             -------------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHh----hcC
Confidence                         134569999999999999988774   799999999999776321100000000000000    010


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCV  274 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  274 (348)
                      ..++         +..++|+|+++++++....  ..| .+++.+
T Consensus       239 p~~r---------~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          239 WMGR---------AGRPEEMVGAALFLASEACSFMTGETIFLTG  273 (275)
T ss_dssp             TTCS---------CBCGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             ccCC---------CcCHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence            1222         5589999999999987643  244 455543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.90  E-value=2e-23  Score=180.81  Aligned_cols=228  Identities=16%  Similarity=0.127  Sum_probs=156.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc--c-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK--L-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~--~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +|+++||||+|+||++++++|+++|++|++++|+..+  . ... .+.....++.++.+|++|.+++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999998665  2 111 111123468899999999998887765       7


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCc-ceEEEeccceeeeecCCCCCCCCcc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESV-KRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~-~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +|+|||+||........+.+.++|  ...+++|+.++.++++++...    + . ++||++||...+.+.+         
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~---------  149 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDL--KQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQGFP---------  149 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSCCT---------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHH--HHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccCCC---------
Confidence            999999999765433223333444  578999999999999988753    4 4 7999999987543211         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC--C
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD--S  229 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~  229 (348)
                                      +...|+.||.+.+.+.+.++.+   .++++..++||.|..+....    ....+... .+.  .
T Consensus       150 ----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~----~~~~~~~~-~~~~~~  208 (258)
T 3a28_C          150 ----------------ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ----IDAELSKI-NGKPIG  208 (258)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH----HHHHHHHH-HCCCTT
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh----hhhhhccc-cCCchH
Confidence                            3357999999999999998876   48999999999997753110    00000000 000  0


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCV  274 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  274 (348)
                      ........   ....+.+.+++|+|+++++++....  ..| .+++.+
T Consensus       209 ~~~~~~~~---~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  253 (258)
T 3a28_C          209 ENFKEYSS---SIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDG  253 (258)
T ss_dssp             HHHHHHHT---TCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHh---cCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECC
Confidence            00000000   0011237799999999999987642  344 455544

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.90  E-value=5.8e-23  Score=181.22  Aligned_cols=225  Identities=13%  Similarity=0.042  Sum_probs=157.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---ccccc-cCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+....   ..... .....++.++.+|++|.+++.++++      
T Consensus        47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999998864321   11111 1123578899999999988877664      


Q ss_pred             -CCCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCccc
Q 035965           79 -GCDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 -~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                       ++|++||+||.... ....+.+.++|  ...+++|+.++.++++++...- ...+||++||...+.+.+          
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~----------  194 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQF--QQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP----------  194 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHH--HHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC----------
Confidence             68999999997542 22223333444  5789999999999999998653 135999999987543221          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     ....|+.||.+.+.+.+.++.+.   |+++..++||.|+++.........     ..........
T Consensus       195 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~-----~~~~~~~~~~  254 (294)
T 3r3s_A          195 ---------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQ-----DKIPQFGQQT  254 (294)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCG-----GGSTTTTTTS
T ss_pred             ---------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCH-----HHHHHHHhcC
Confidence                           33579999999999999998774   899999999999987411100000     0000000011


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                                ..+.+..++|+|+++++++....  ..| .+++.+.
T Consensus       255 ----------p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  290 (294)
T 3r3s_A          255 ----------PMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGG  290 (294)
T ss_dssp             ----------TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----------CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence                      12337789999999999987543  234 5666543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.90  E-value=1.2e-23  Score=184.02  Aligned_cols=225  Identities=14%  Similarity=0.076  Sum_probs=158.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-cc-CCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KW-TRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..+. .... +. ....++.++.+|++|.+++.++++       
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999999999986543 1111 10 112478999999999998877765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|+|||+||..........+.++|  ...+++|+.++.++++++..    .+ ..+||++||...+.+..         
T Consensus       105 ~id~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  172 (277)
T 4fc7_A          105 RIDILINCAAGNFLCPAGALSFNAF--KTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQA---------  172 (277)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTCT---------
T ss_pred             CCCEEEECCcCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCC---------
Confidence            6899999999755443334444445  57899999999999998753    23 47999999987554321         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      ....|+.||.+.+.+.+.++.+.   |+++..++||.|.++...................    
T Consensus       173 ----------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~----  232 (277)
T 4fc7_A          173 ----------------LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTA----  232 (277)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHT----
T ss_pred             ----------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhcc----
Confidence                            23579999999999999988773   7999999999999863110000000001111111    


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .          ..+-+..++|+|+++++++....  ..| .+++.+.
T Consensus       233 ~----------p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG  269 (277)
T 4fc7_A          233 S----------PLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGG  269 (277)
T ss_dssp             S----------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C----------CCCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCC
Confidence            1          11226699999999999998533  344 4566543

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.90  E-value=5.1e-23  Score=177.08  Aligned_cols=215  Identities=18%  Similarity=0.169  Sum_probs=153.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+++|+++||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35678999999999999999999999999999999986543 2111 11112468899999999998877764       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC--CcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE--SVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      ++|+|||+||........+.+.++|  ...+++|+.++.++++++...-  ..++||++||...+.+.+           
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  150 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDW--TRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVR-----------  150 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCT-----------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCC-----------
Confidence            6899999999764433233333444  5789999999999999886431  016999999986543211           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.||.+.+.+.+.++.+   .|++++.++||.|.++.........   .......    .+
T Consensus       151 --------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~~~~----~~  209 (247)
T 2jah_A          151 --------------NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTA---TKEMYEQ----RI  209 (247)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHH---HHHHHHH----HT
T ss_pred             --------------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchh---hHHHHHh----cc
Confidence                          3357999999999999988766   4899999999999887432111100   0000000    00


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                        ++..       ++..+|+|+++++++..+.
T Consensus       210 --~~~~-------~~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          210 --SQIR-------KLQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             --TTSC-------CBCHHHHHHHHHHHHHSCT
T ss_pred             --cccC-------CCCHHHHHHHHHHHhCCCc
Confidence              1111       5799999999999998653

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.90  E-value=4.6e-23  Score=177.54  Aligned_cols=216  Identities=15%  Similarity=0.117  Sum_probs=148.3

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHh---hcCCCEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKA---VMGCDGV   83 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~~~~d~V   83 (348)
                      ...++|+||||||+|+||+++++.|+++|++|++++|+.....  ..    ..+.++ +|+  .+++.++   +.++|+|
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--~~----~~~~~~-~D~--~~~~~~~~~~~~~iD~l   85 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK--RS----GHRYVV-CDL--RKDLDLLFEKVKEVDIL   85 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--HT----CSEEEE-CCT--TTCHHHHHHHSCCCSEE
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH--hh----CCeEEE-eeH--HHHHHHHHHHhcCCCEE
Confidence            3456889999999999999999999999999999999763221  11    246667 999  3344444   3489999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHH----hhcCCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC----LKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ||+||........+.+.++|  ...+++|+.++.++++++    ++.+ .++||++||..++.+.+              
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------------  148 (249)
T 1o5i_A           86 VLNAGGPKAGFFDELTNEDF--KEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIE--------------  148 (249)
T ss_dssp             EECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT--------------
T ss_pred             EECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCCC--------------
Confidence            99999755433223333444  578999999987776554    4445 68999999987543211              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                 +...|+.+|.+.+.+.+.++.+   .+++++.++|+.++++......+...   ...+...   .+   
T Consensus       149 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~---~p---  208 (249)
T 1o5i_A          149 -----------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEK---KKQVESQ---IP---  208 (249)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHH---HHHHHTT---ST---
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhH---HHHHHhc---CC---
Confidence                       3357999999999999998876   58999999999999885321001000   0011110   11   


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                             .+.+++++|+|+++++++....  ..| .|++.+.
T Consensus       209 -------~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG  243 (249)
T 1o5i_A          209 -------MRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGG  243 (249)
T ss_dssp             -------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence                   1237899999999999887542  234 4666544

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.90  E-value=7.9e-23  Score=178.27  Aligned_cols=227  Identities=16%  Similarity=0.072  Sum_probs=157.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|++|||||+|+||++++++|+++|++|++++++..+.  .... +.....++.++.+|++|.+++.++++       
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999999988764322  1111 11123578999999999998887765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ++|++||+||........+.+.++|  ...+++|+.++.++++++...- ...+||++||..... ...           
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~-----------  161 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEF--DRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD-FSV-----------  161 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT-CCC-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc-CCC-----------
Confidence            6899999999865544334444445  5789999999999999987642 135899999965210 001           


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCC--------CchHHHHHhhhc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSV--------PSSIQVLLSPIT  226 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~--------~~~~~~~~~~~~  226 (348)
                                  ++...|+.||.+.+.+.+.++.+   .++++..++||.|.++......        ............
T Consensus       162 ------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (270)
T 3is3_A          162 ------------PKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAA  229 (270)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHH
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHH
Confidence                        13457999999999999999877   4899999999999887422100        000000000000


Q ss_pred             CCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          227 GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                      .             ....+.+.+++|+|+++++++....  ..|. +++.+
T Consensus       230 ~-------------~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  267 (270)
T 3is3_A          230 H-------------ASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDG  267 (270)
T ss_dssp             H-------------HSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             h-------------cCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCC
Confidence            0             0122336789999999999987543  3454 55544

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.90  E-value=3.6e-23  Score=181.12  Aligned_cols=233  Identities=17%  Similarity=0.098  Sum_probs=159.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC-------------cc-cccc-ccCCCCCeEEEEccCCCcchH
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG-------------KL-QIFS-KWTRSDRLRLFQADLQVEGSF   73 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~-------------~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~   73 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..             +. .... ......++.++.+|++|.+++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            45789999999999999999999999999999998421             11 1110 111235788999999999988


Q ss_pred             HHhhc-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeee
Q 035965           74 DKAVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTIT  142 (348)
Q Consensus        74 ~~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~  142 (348)
                      .++++       ++|++||+||........+.+.++|  ...+++|+.++.++++++...    +...+||++||...+.
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  166 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDF--RDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK  166 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH--HHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence            87764       5899999999876544334444445  578999999999999986542    2246899999987543


Q ss_pred             ecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHH
Q 035965          143 AKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQ  219 (348)
Q Consensus       143 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~  219 (348)
                      +.+                         ....|+.||.+.+.+.+.++.+   .++++..++||.|..+.....   ...
T Consensus       167 ~~~-------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~  218 (277)
T 3tsc_A          167 MQP-------------------------FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD---MVT  218 (277)
T ss_dssp             CCS-------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH---HHH
T ss_pred             CCC-------------------------CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch---hhh
Confidence            221                         3357999999999999999877   479999999999988753311   000


Q ss_pred             HHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          220 VLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .........+..........   .. -+.+++|+|+++++++....  ..| .+++.+.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~---p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  273 (277)
T 3tsc_A          219 AVGQAMETNPQLSHVLTPFL---PD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQG  273 (277)
T ss_dssp             HHHHHHHTCGGGTTTTCCSS---SC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhhhcccccHHHHHHhhhcc---CC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence            01111101111110001110   11 27899999999999997543  344 4555543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.90  E-value=1.5e-23  Score=186.96  Aligned_cols=223  Identities=15%  Similarity=0.080  Sum_probs=146.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc---cCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK---WTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +++++||||||+|+||++++++|+++|++|++++|+..+. .....   .....++.++.+|++|.+++.++++      
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999999999987644 22111   1111268899999999998887765      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC---------CcceEEEeccceeeeecCCCC
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE---------SVKRVVLTSSVSTITAKDSSG  148 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---------~~~~~v~~SS~~~~~~~~~~~  148 (348)
                       ++|+|||+||..........+.++|  ...+++|+.|+.++++++....         ..++||++||...+.+.+   
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~---  160 (319)
T 3ioy_A           86 GPVSILCNNAGVNLFQPIEESSYDDW--DWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG---  160 (319)
T ss_dssp             CCEEEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS---
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC---
Confidence             5799999999765443333333444  5789999999999999886532         145799999987654321   


Q ss_pred             CCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhh
Q 035965          149 EWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPI  225 (348)
Q Consensus       149 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~  225 (348)
                                            ....|+.||.+.+.+.+.++.+   .++++++++||.|.++....... ....+....
T Consensus       161 ----------------------~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~  217 (319)
T 3ioy_A          161 ----------------------SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDI-RPDALKGEV  217 (319)
T ss_dssp             ----------------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------------------
T ss_pred             ----------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccccc-Cchhhcccc
Confidence                                  2357999999777777766544   48999999999998875432100 000000000


Q ss_pred             cCCC-CccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          226 TGDS-KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       226 ~~~~-~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      .... ..+.   ...  ......++++|+|+.++.+++++
T Consensus       218 ~~~~~~~~~---~~~--~~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          218 KPVDKTAVE---RLA--GVHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             --------------C--CGGGSSBCHHHHHHHHHHHHHTT
T ss_pred             cchhHHHHH---HHH--HhhhcCCCHHHHHHHHHHHHHcC
Confidence            0000 0000   000  00111379999999999999975

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.90  E-value=2.6e-23  Score=176.21  Aligned_cols=209  Identities=17%  Similarity=0.112  Sum_probs=152.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~Vih   85 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..                  +|++|.+++.++++   ++|++||
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------------------~D~~~~~~v~~~~~~~g~id~lv~   65 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG------------------LDISDEKSVYHYFETIGAFDHLIV   65 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT------------------CCTTCHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc------------------cCCCCHHHHHHHHHHhCCCCEEEE
Confidence            45689999999999999999999999999999998652                  89999998888775   6899999


Q ss_pred             ccccCc-cccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           86 VAASME-FDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        86 ~a~~~~-~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      +||... .....+.+.++|  ...+++|+.++.++++++...- ...+||++||...+.+.+                  
T Consensus        66 nAg~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------------  125 (223)
T 3uce_A           66 TAGSYAPAGKVVDVEVTQA--KYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA------------------  125 (223)
T ss_dssp             CCCCCCCCSCTTTSCHHHH--HHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT------------------
T ss_pred             CCCCCCCCCCcccCCHHHH--HhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC------------------
Confidence            999763 222223334444  5789999999999999997652 135899999987543211                  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhCC-CcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCC
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANENK-IDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRM  242 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (348)
                             +...|+.+|.+.+.+.+.++.+.+ +++..++|+.+.++............+......   ..          
T Consensus       126 -------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---~~----------  185 (223)
T 3uce_A          126 -------NTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQS---HL----------  185 (223)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHH---HS----------
T ss_pred             -------CchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhh---cC----------
Confidence                   345799999999999999998854 999999999999875443211111111111100   01          


Q ss_pred             CCcceeeHHHHHHHHHHhhcCCCCCce-EEEecc
Q 035965          243 GSIALVHIEDICNAHIFLMENDRAQGQ-YICCVK  275 (348)
Q Consensus       243 ~~r~~i~v~D~a~~~~~~~~~~~~~~~-y~~~~~  275 (348)
                      ..+.+.+++|+|++++++++.....|. +++.+.
T Consensus       186 ~~~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG  219 (223)
T 3uce_A          186 PVGKVGEASDIAMAYLFAIQNSYMTGTVIDVDGG  219 (223)
T ss_dssp             TTCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             CCCCccCHHHHHHHHHHHccCCCCCCcEEEecCC
Confidence            123377999999999999987655564 566543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.90  E-value=3.6e-23  Score=177.76  Aligned_cols=224  Identities=20%  Similarity=0.206  Sum_probs=156.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHH-CCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-----CCCEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLE-RGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-----GCDGV   83 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~V   83 (348)
                      +||++|||||+|+||++++++|++ .|+.|++++|+....        .+.+.++.+|++|.+++.++++     ++|++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~l   74 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS--------AENLKFIKADLTKQQDITNVLDIIKNVSFDGI   74 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC--------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc--------cccceEEecCcCCHHHHHHHHHHHHhCCCCEE
Confidence            578999999999999999999998 789999999876411        1367899999999999888775     68999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcccCCCCCCc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI  162 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~  162 (348)
                      ||+||........+.+.++|  ...+++|+.++.++++++...- ...++|++||...+.+.+                 
T Consensus        75 v~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------------  135 (244)
T 4e4y_A           75 FLNAGILIKGSIFDIDIESI--KKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKP-----------------  135 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHH--HHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCT-----------------
T ss_pred             EECCccCCCCCcccCCHHHH--HHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCC-----------------
Confidence            99999865544334444445  5789999999999999987652 125899999987543221                 


Q ss_pred             chhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccc
Q 035965          163 HHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVS  239 (348)
Q Consensus       163 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (348)
                              +...|+.||.+.+.+.+.++.+   +++++..++||.|.++....    ......... +.... .......
T Consensus       136 --------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~----~~~~~~~~~-~~~~~-~~~~~~~  201 (244)
T 4e4y_A          136 --------NSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRN----LIQKYANNV-GISFD-EAQKQEE  201 (244)
T ss_dssp             --------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHH----HHHHHHHHH-TCCHH-HHHHHHH
T ss_pred             --------CCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHH----HHHhhhhhc-CCCHH-HHHHHHh
Confidence                    3357999999999999999874   58999999999998763211    000000000 00000 0000000


Q ss_pred             cCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 035965          240 NRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCV  274 (348)
Q Consensus       240 ~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  274 (348)
                      .....+.+.+++|+|+++++++....  ..| .+++.+
T Consensus       202 ~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  239 (244)
T 4e4y_A          202 KEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDG  239 (244)
T ss_dssp             TTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECC
Confidence            00122347799999999999997543  344 455544

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.90  E-value=3.3e-23  Score=179.79  Aligned_cols=232  Identities=13%  Similarity=0.076  Sum_probs=156.8

Q ss_pred             CCCCCcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc----cccCCCCCeEEEEccCCCcchHHH
Q 035965            1 MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF----SKWTRSDRLRLFQADLQVEGSFDK   75 (348)
Q Consensus         1 m~~~~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~~~Dl~d~~~~~~   75 (348)
                      |.+...+.+++|++|||||+|+||++++++|+++|++|++++|..... ...    .+.....++.++.+|++|.+++.+
T Consensus         1 m~~~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~   80 (262)
T 3ksu_A            1 MSLTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAK   80 (262)
T ss_dssp             ---CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHH
T ss_pred             CCCccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            555555567789999999999999999999999999999998864322 111    111123468899999999998887


Q ss_pred             hhc-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCC
Q 035965           76 AVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSS  147 (348)
Q Consensus        76 ~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~  147 (348)
                      +++       ++|++||+||........+.+.++|  ...+++|+.++..+++++... ...+++|++||...+.+.+. 
T Consensus        81 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~-  157 (262)
T 3ksu_A           81 LFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEF--DAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF-  157 (262)
T ss_dssp             HHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHH--HHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC-
Confidence            775       6899999999865544334444445  578999999999999999875 22578999999875543322 


Q ss_pred             CCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhh
Q 035965          148 GEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSP  224 (348)
Q Consensus       148 ~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  224 (348)
                                              ...|+.||.+.+.+.+.++.+.   ++++..++||.|..+.........   ....
T Consensus       158 ------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~~~~  210 (262)
T 3ksu_A          158 ------------------------YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKE---STAF  210 (262)
T ss_dssp             ------------------------CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------
T ss_pred             ------------------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchH---HHHH
Confidence                                    2359999999999999999885   799999999998665211100000   0000


Q ss_pred             hcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC-CCce-EEEecc
Q 035965          225 ITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR-AQGQ-YICCVK  275 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~-~~~~-y~~~~~  275 (348)
                      ..   ...          ..+.+..++|+|+++++++.... ..|. +++.+.
T Consensus       211 ~~---~~~----------~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg  250 (262)
T 3ksu_A          211 HK---SQA----------MGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGG  250 (262)
T ss_dssp             ------------------CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTT
T ss_pred             HH---hcC----------cccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCC
Confidence            00   000          12236789999999999987622 3454 566554

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.90  E-value=2.5e-23  Score=181.53  Aligned_cols=236  Identities=15%  Similarity=0.041  Sum_probs=160.9

Q ss_pred             CCCCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            7 STGRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         7 ~~~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .....|+||||||+  |+||++++++|+++|++|++++|+.... ....+....+++.++.+|++|.+++.++++     
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            34568999999999  9999999999999999999999985432 222222223458899999999998887765     


Q ss_pred             --CCCEEEEccccCcc----ccccc-cccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCC
Q 035965           79 --GCDGVFHVAASMEF----DINVK-DNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 --~~d~Vih~a~~~~~----~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                        ++|++||+||....    ....+ .+.++|  ...+++|+.++.++++++...- ...+||++||...+.+.+     
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----  162 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENF--RIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIP-----  162 (271)
T ss_dssp             CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHH--HHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-----
T ss_pred             cCCCCEEEECCccCccccccCccccccCHHHH--HHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCC-----
Confidence              57999999997653    11112 233333  5789999999999999987641 136899999987543221     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          +...|+.||.+.+.+.+.++.+   .++++..++||.|..+..... . ...........
T Consensus       163 --------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~-~~~~~~~~~~~  220 (271)
T 3ek2_A          163 --------------------NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-K-SFGKILDFVES  220 (271)
T ss_dssp             --------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-H-HHHHHHHHHHH
T ss_pred             --------------------CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-c-chHHHHHHHHh
Confidence                                3357999999999999998876   489999999999988754431 1 11111111110


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc-CcChHHHHH
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK-SCPISEFID  284 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~-~~s~~el~~  284 (348)
                      .   .          ..+.+..++|+|+++++++....  ..| .+++.+. ..++.++++
T Consensus       221 ~---~----------~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          221 N---S----------PLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             H---S----------TTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             c---C----------CcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence            0   0          11226789999999999998632  345 4666544 666655543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.90  E-value=9e-23  Score=175.98  Aligned_cols=202  Identities=13%  Similarity=0.087  Sum_probs=149.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      .|+|+||||||+|+||++++++|+++|++|++++|+..+.          ....+.+|++|.+++.++++       ++|
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~----------~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD   89 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN----------ADHSFTIKDSGEEEIKSVIEKINSKSIKVD   89 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SSEEEECSCSSHHHHHHHHHHHHTTTCCEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----------cccceEEEeCCHHHHHHHHHHHHHHcCCCC
Confidence            3578999999999999999999999999999999987643          22357889999988877664       469


Q ss_pred             EEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           82 GVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        82 ~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      +|||+||...... ......++|  ...+++|+.++.++++++...- ..++||++||...+.+.+              
T Consensus        90 ~li~~Ag~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------------  153 (251)
T 3orf_A           90 TFVCAAGGWSGGNASSDEFLKSV--KGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTS--------------  153 (251)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT--------------
T ss_pred             EEEECCccCCCCCcccccCHHHH--HHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCC--------------
Confidence            9999999754432 222323333  5789999999999999987642 135899999987543221              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                 +...|+.+|.+.+.+.+.++.+     .++++..++||.|.++..            .......     
T Consensus       154 -----------~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~------------~~~~~~~-----  205 (251)
T 3orf_A          154 -----------GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN------------RKYMSDA-----  205 (251)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH------------HHHCTTS-----
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch------------hhhcccc-----
Confidence                       3457999999999999999887     579999999999876521            1111111     


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcC---CCCCc-eEEE
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMEN---DRAQG-QYIC  272 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~---~~~~~-~y~~  272 (348)
                              ..+.+++++|+|+++++++..   ....| .+++
T Consensus       206 --------~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v  239 (251)
T 3orf_A          206 --------NFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKF  239 (251)
T ss_dssp             --------CGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             --------cccccCCHHHHHHHHHHHhcCccccCCcceEEEE
Confidence                    123378999999999999987   33344 4554

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.90  E-value=4.7e-23  Score=175.89  Aligned_cols=203  Identities=20%  Similarity=0.142  Sum_probs=146.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      |++|++|||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       .+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL--GNAVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--GGGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--cCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            3468999999999999999999999999999999987544 222111  1258899999999998877765       58


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      |++||+||........+.+.++|  ...+++|+.++..+++++...  ....++|++||...+.+.+             
T Consensus        79 d~lvnnAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~-------------  143 (235)
T 3l6e_A           79 ELVLHCAGTGEFGPVGVYTAEQI--RRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKA-------------  143 (235)
T ss_dssp             SEEEEECCCC------CCCHHHH--HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCS-------------
T ss_pred             cEEEECCCCCCCCChHhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCC-------------
Confidence            99999999865433333344444  578999999999999988542  1124999999987543221             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                                  ....|+.||.+.+.+.+.++.+   .++++..++||.|..+.....            ..    .+  
T Consensus       144 ------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~------------~~----~~--  193 (235)
T 3l6e_A          144 ------------NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT------------DH----VD--  193 (235)
T ss_dssp             ------------SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------------
T ss_pred             ------------CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc------------CC----CC--
Confidence                        3357999999999999999886   479999999999876542210            00    00  


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCCCC
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMENDRA  266 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~  266 (348)
                              ...++.++|+|+++++++.++..
T Consensus       194 --------~~~~~~pedvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          194 --------PSGFMTPEDAAAYMLDALEARSS  216 (235)
T ss_dssp             -----------CBCHHHHHHHHHHHTCCCSS
T ss_pred             --------CcCCCCHHHHHHHHHHHHhCCCC
Confidence                    01277999999999999987643

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.90  E-value=1.2e-22  Score=178.37  Aligned_cols=217  Identities=14%  Similarity=0.149  Sum_probs=156.2

Q ss_pred             cCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc--------ccccCCCCCeEEEEccCCCcchHHHh
Q 035965            6 ESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI--------FSKWTRSDRLRLFQADLQVEGSFDKA   76 (348)
Q Consensus         6 ~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~--------~~~~~~~~~~~~~~~Dl~d~~~~~~~   76 (348)
                      .+.+++|++|||||+|+||++++++|+++|++|++++|+..+. .+        ........++.++.+|++|.+++.++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            4556788999999999999999999999999999999987642 11        00111234688999999999988877


Q ss_pred             hc-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCC
Q 035965           77 VM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDS  146 (348)
Q Consensus        77 ~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~  146 (348)
                      ++       ++|++||+||........+.+.++|  ...+++|+.++.++++++...   ...++||++||...+.+...
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~  161 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRF--DLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL  161 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHH--HHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC
Confidence            65       7999999999876544444444555  578999999999999988754   12579999999764432111


Q ss_pred             CCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHh
Q 035965          147 SGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLS  223 (348)
Q Consensus       147 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~  223 (348)
                                              +...|+.||.+.+.+.+.++.+   .|+++..++|+.+....       .   ...
T Consensus       162 ------------------------~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~-------~---~~~  207 (285)
T 3sc4_A          162 ------------------------RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA-------A---VQN  207 (285)
T ss_dssp             ------------------------CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH-------H---HHH
T ss_pred             ------------------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH-------H---HHh
Confidence                                    3357999999999999999887   57999999998432210       1   111


Q ss_pred             hhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC-CCceEE
Q 035965          224 PITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR-AQGQYI  271 (348)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~-~~~~y~  271 (348)
                      .. +....   .+         -+...+|+|+++++++..+. ..|..+
T Consensus       208 ~~-~~~~~---~~---------r~~~pedvA~~~~~l~s~~~~~tG~~i  243 (285)
T 3sc4_A          208 LL-GGDEA---MA---------RSRKPEVYADAAYVVLNKPSSYTGNTL  243 (285)
T ss_dssp             HH-TSCCC---CT---------TCBCTHHHHHHHHHHHTSCTTCCSCEE
T ss_pred             hc-ccccc---cc---------CCCCHHHHHHHHHHHhCCcccccceEE
Confidence            11 11111   11         26689999999999998764 344443

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.90  E-value=3.8e-23  Score=176.04  Aligned_cols=201  Identities=21%  Similarity=0.195  Sum_probs=146.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCC----CEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGC----DGVFH   85 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----d~Vih   85 (348)
                      ||+||||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++.+    |+|||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL--SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC--SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--hhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            57899999999999999999999999999999987644 222111  246889999999999998887653    99999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC--CcceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE--SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      +||........+.+.++|  ...+++|+.++.++++++...-  ...++|++||...+.+.+                  
T Consensus        79 ~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~------------------  138 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQI--QTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKA------------------  138 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCT------------------
T ss_pred             eCCcCCCCccccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCC------------------
Confidence            999765544334444444  5789999999999999887531  123899999987543211                  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccccccc
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSN  240 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (348)
                             +...|+.||.+.+.+.+.++.+.   ++++..++||.|..+.....             +  ...        
T Consensus       139 -------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------------~--~~~--------  188 (230)
T 3guy_A          139 -------QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETS-------------G--KSL--------  188 (230)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-----------------------------------
T ss_pred             -------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhc-------------C--CCC--------
Confidence                   33579999999999999998885   79999999999877632211             0  001        


Q ss_pred             CCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          241 RMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       241 ~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                        ..+.+++++|+|+++++++.++.
T Consensus       189 --~~~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          189 --DTSSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             ------CCCHHHHHHHHHHHCCEET
T ss_pred             --CcccCCCHHHHHHHHHHHHhCcC
Confidence              12237899999999999998654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.90  E-value=1.5e-22  Score=180.37  Aligned_cols=236  Identities=18%  Similarity=0.127  Sum_probs=159.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc----------ccc----cccCCCCCeEEEEccCCCcchHH
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL----------QIF----SKWTRSDRLRLFQADLQVEGSFD   74 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~----~~~~~~~~~~~~~~Dl~d~~~~~   74 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+....          ...    .......++.++.+|++|.+++.
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            3468999999999999999999999999999999863211          000    01112357889999999999888


Q ss_pred             Hhhc-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeee
Q 035965           75 KAVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITA  143 (348)
Q Consensus        75 ~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~  143 (348)
                      ++++       ++|++||+||........+.+.++|  ...+++|+.++.++++++..    .+...+||++||...+.+
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~  201 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQW--SDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG  201 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC
Confidence            7765       6899999999865544334444445  57899999999999998854    222468999999875432


Q ss_pred             cCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHH
Q 035965          144 KDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQV  220 (348)
Q Consensus       144 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~  220 (348)
                      .+                         ....|+.||.+.+.+.+.++.+   .|+++..++||.|.++.....  .....
T Consensus       202 ~~-------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~  254 (317)
T 3oec_A          202 AP-------------------------GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE--KLLKM  254 (317)
T ss_dssp             CT-------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH--HHHHH
T ss_pred             CC-------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch--hhhhh
Confidence            21                         3357999999999999999887   489999999999988742210  00000


Q ss_pred             HHhhhcCCCC-c-cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          221 LLSPITGDSK-F-FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       221 ~~~~~~~~~~-~-~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      +......... . .......  ....+.|++++|+|+++++++....  ..| .+++.+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG  312 (317)
T 3oec_A          255 FLPHLENPTREDAAELFSQL--TLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG  312 (317)
T ss_dssp             HCTTCSSCCHHHHHHHHTTT--CSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhhhccccchhHHHHHHhhh--ccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcc
Confidence            0000000000 0 0000000  0012458899999999999986543  344 4666543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.90  E-value=2.8e-23  Score=179.85  Aligned_cols=230  Identities=14%  Similarity=0.088  Sum_probs=144.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcC----CCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMG----CDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~d~Vih~   86 (348)
                      ||+||||||+|+||++++++|+++|++|++++|+..+...          . +.+|++|.+++.++++.    +|+|||+
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~   69 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------D-LSTAEGRKQAIADVLAKCSKGMDGLVLC   69 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------C-TTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------c-cccCCCCHHHHHHHHHHhCCCCCEEEEC
Confidence            4789999999999999999999999999999998754210          1 56899999988888754    5999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCc
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI  162 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~  162 (348)
                      ||......         +.+..+++|+.++.++++++..    .+ .++||++||...+..............+.++...
T Consensus        70 Ag~~~~~~---------~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~  139 (257)
T 1fjh_A           70 AGLGPQTK---------VLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKA  139 (257)
T ss_dssp             CCCCTTCS---------SHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHH
T ss_pred             CCCCCCcc---------cHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchhhh
Confidence            99754222         2258899999999999998863    33 5799999998765321110000000011100000


Q ss_pred             ch-hh--ccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          163 HH-VW--NKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       163 ~~-~~--~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                      .. ..  ...++...|+.||.+.+.+++.++.+   .+++++.++||.|.++..........  ........  ..+   
T Consensus       140 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~~~--~~~---  212 (257)
T 1fjh_A          140 RAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR--YGESIAKF--VPP---  212 (257)
T ss_dssp             HHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------C--CCS---
T ss_pred             hhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchh--HHHHHHhc--ccc---
Confidence            00 00  00113468999999999999998876   68999999999999875432100000  00000000  011   


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCC--CCCce-EEEecc
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQ-YICCVK  275 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~-y~~~~~  275 (348)
                             .+.+++++|+|+++++++..+  ...|. +++.+.
T Consensus       213 -------~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          213 -------MGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             -------TTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -------cCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence                   122789999999999999865  23454 555543

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=6.4e-23  Score=178.77  Aligned_cols=230  Identities=15%  Similarity=0.136  Sum_probs=158.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|+++||||+|+||++++++|+++|++|++++|++.+. .....   ..++.++.+|++|.+++.++++       +
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE---LPGAVFILCDVTQEDDVKTLVSETIRRFGR   82 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hcCCeEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45678999999999999999999999999999999976543 22111   1258899999999998887765       6


Q ss_pred             CCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           80 CDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        80 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      +|+|||+||.... ....+.+.++|  ...+++|+.++.++++++...  ...++||++||...+.+.+           
T Consensus        83 iD~lv~nAg~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  149 (270)
T 1yde_A           83 LDCVVNNAGHHPPPQRPEETSAQGF--RQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA-----------  149 (270)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT-----------
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC-----------
Confidence            8999999997543 22222333334  578999999999999988642  1147999999986544321           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCC---CCCchHHHHHhhhcCCCC
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTS---SVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~  230 (348)
                                    ....|+.+|.+.+.+.+.++.+   +++++..+||+.|+++....   ..+.....+.....    
T Consensus       150 --------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----  211 (270)
T 1yde_A          150 --------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGML----  211 (270)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHH----
T ss_pred             --------------CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhh----
Confidence                          2347999999999999998866   58999999999999874210   00000000100000    


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCC-CCCc-eEEEecc-CcChHH
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMEND-RAQG-QYICCVK-SCPISE  281 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~-~~~~-~y~~~~~-~~s~~e  281 (348)
                      ..+ .++         +...+|+|+++++++... ...| .+.+.+. ...+.+
T Consensus       212 ~~p-~~r---------~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~~  255 (270)
T 1yde_A          212 AQP-LGR---------MGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYGC  255 (270)
T ss_dssp             TST-TSS---------CBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC--
T ss_pred             cCC-CCC---------CcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccCc
Confidence            011 122         669999999999988652 2344 4666544 444433

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.90  E-value=9.8e-23  Score=177.20  Aligned_cols=223  Identities=18%  Similarity=0.155  Sum_probs=153.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|++|||||+|+||++++++|+++|++|++++++..+.  .... ......++.++.+|++|.+++.++++       
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3467899999999999999999999999999986654422  1111 11123578899999999998887765       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ++|++||+||........+.+.++|  ...+++|+.++.++++++... ....+||++||.....+.+            
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  170 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVF--DRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP------------  170 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC------------
Confidence            6899999999865544334444445  578999999999999988754 1136899999976543221            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   ....|+.||.+.+.+.+.++.+.   ++++..++||.|..+.........   ....+...   .  
T Consensus       171 -------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~---~--  229 (267)
T 3u5t_A          171 -------------SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDE---VRDRFAKL---A--  229 (267)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------CHHHHHTS---S--
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHH---HHHHHHhc---C--
Confidence                         33579999999999999999884   799999999999877532210000   00111110   1  


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                              ..+.+..++|+|+++++++....  ..|. +++.+
T Consensus       230 --------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  264 (267)
T 3u5t_A          230 --------PLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANG  264 (267)
T ss_dssp             --------TTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESS
T ss_pred             --------CCCCCcCHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence                    12236799999999999987543  2554 45544

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.90  E-value=3.2e-23  Score=180.73  Aligned_cols=212  Identities=13%  Similarity=0.116  Sum_probs=147.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|++|||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       ++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI--GDDALCVPTDVTDPDSVRALFTATVEKFGRV  103 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--TSCCEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            3467899999999999999999999999999999986544 222111  2468899999999998888775       79


Q ss_pred             CEEEEccccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHhhc----C-CcceEEEeccceeeeecCCCCCCCCcc
Q 035965           81 DGVFHVAASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACLKS----E-SVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        81 d~Vih~a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      |+|||+||..... ...+.+.++|  ...+++|+.++.++++++...    + ...+||++||...+.+.+         
T Consensus       104 D~lVnnAg~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~---------  172 (272)
T 4dyv_A          104 DVLFNNAGTGAPAIPMEDLTFAQW--KQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP---------  172 (272)
T ss_dssp             CEEEECCCCCCCSSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT---------
T ss_pred             CEEEECCCCCCCCCChhhCCHHHH--HHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC---------
Confidence            9999999985442 2223334444  578999999998888877643    1 136999999987543211         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      +...|+.||.+.+.+.+.++.+   .++++..++||.|..+........    ....    ...
T Consensus       173 ----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~----~~~  228 (272)
T 4dyv_A          173 ----------------YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG----VPQA----DLS  228 (272)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc----chhh----hhc
Confidence                            3457999999999999998876   489999999999988743221000    0000    000


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCCCC
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQ  267 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~  267 (348)
                      .          ....+++++|+|+++++++..+...
T Consensus       229 ~----------~~~~~~~pedvA~~v~fL~s~~~~~  254 (272)
T 4dyv_A          229 I----------KVEPVMDVAHVASAVVYMASLPLDA  254 (272)
T ss_dssp             -----------------CHHHHHHHHHHHHHSCTTS
T ss_pred             c----------cccCCCCHHHHHHHHHHHhCCCCcC
Confidence            1          1223789999999999999987653

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.90  E-value=1.1e-22  Score=177.01  Aligned_cols=233  Identities=17%  Similarity=0.123  Sum_probs=158.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-cc--CCCCCeEEEEccCCCcchHHHhhc---CC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KW--TRSDRLRLFQADLQVEGSFDKAVM---GC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~--~~~~~~~~~~~Dl~d~~~~~~~~~---~~   80 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..+. .... +.  .....+.++.+|++|.+++.++++   ++
T Consensus         7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i   86 (267)
T 3t4x_A            7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV   86 (267)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence            34568999999999999999999999999999999986543 1111 11  112357889999999998887765   68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |++||+||........+.+.++|  ...+++|+.++..+++++..    .+ .++||++||...+.+.+           
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----------  152 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDW--FKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPSQ-----------  152 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCCT-----------
T ss_pred             CEEEECCCCCCCCccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCCC-----------
Confidence            99999999876554444444445  57899999998888776643    44 67999999987543211           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    +...|+.||.+.+.+.+.++.+.   ++++..++||.+..+...       ..+.....+......
T Consensus       153 --------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~-------~~~~~~~~~~~~~~~  211 (267)
T 3t4x_A          153 --------------EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVE-------TMLNSLYPNEQLTIE  211 (267)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHH-------HHHHHSSTTSCCCHH
T ss_pred             --------------cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHH-------HHHhhcCcccCCCHH
Confidence                          34579999999999999998875   699999999998775211       000000000000000


Q ss_pred             -----cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          234 -----ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       234 -----~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                           ...........+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       212 ~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  261 (267)
T 3t4x_A          212 EAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGG  261 (267)
T ss_dssp             HHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhhccCCcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence                 00000000012448899999999999987532  344 4666544

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.90  E-value=1.1e-22  Score=175.46  Aligned_cols=216  Identities=22%  Similarity=0.199  Sum_probs=155.1

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cC-CCCCeEEEEccC--CCcchHHHhhc---
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WT-RSDRLRLFQADL--QVEGSFDKAVM---   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~-~~~~~~~~~~Dl--~d~~~~~~~~~---   78 (348)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|+..+. ..... .. ...++.++.+|+  +|.+++.++++   
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            346678999999999999999999999999999999986543 21111 00 123678999999  88887777664   


Q ss_pred             ----CCCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCC
Q 035965           79 ----GCDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGE  149 (348)
Q Consensus        79 ----~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  149 (348)
                          ++|++||+||.... ....+.+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+..    
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~----  160 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVW--QDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRA----  160 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCCT----
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHH--HHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCCC----
Confidence                68999999997533 22223334444  5789999999999999884    344 67999999987543221    


Q ss_pred             CCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCC--CcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          150 WRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENK--IDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       150 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                           +...|+.||.+.+.+.+.++.+.+  +++..+.|+.|..+.            ......
T Consensus       161 ---------------------~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~------------~~~~~~  207 (252)
T 3f1l_A          161 ---------------------NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM------------RASAFP  207 (252)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH------------HHHHCT
T ss_pred             ---------------------CCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch------------hhhhCC
Confidence                                 335799999999999999998864  899999999886542            111111


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      ..             ..+.+..++|+++++++++....  ..| .+++.+.
T Consensus       208 ~~-------------~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG  245 (252)
T 3f1l_A          208 TE-------------DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPG  245 (252)
T ss_dssp             TC-------------CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC
T ss_pred             cc-------------chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCC
Confidence            10             01226689999999999987643  344 4566443

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=4.6e-23  Score=177.59  Aligned_cols=205  Identities=15%  Similarity=0.148  Sum_probs=148.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc----cCCCCCeEEEEccCCCcchHHHhhc----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK----WTRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..+. .....    .....++.++.+|++|.+++.++++    
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            45578999999999999999999999999999999987543 21111    0111468899999999988877664    


Q ss_pred             ---CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCC
Q 035965           79 ---GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                         ++|++||+||....... ..+.++|  ...+++|+.++..+++++..    .+ .++||++||...+.+..      
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~-~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  153 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSL-SEPVDNF--RKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGFA------  153 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCC-SCHHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-------C------
T ss_pred             hcCCCCEEEECCCcCCCCCC-CCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCCC------
Confidence               68999999998654433 3344444  57899999999999998843    34 57999999987543211      


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                                         +...|+.||.+.+.+.+.++.+   .++++..++||.|..+.            ...... 
T Consensus       154 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~------------~~~~~~-  201 (250)
T 3nyw_A          154 -------------------DGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM------------AKKAGT-  201 (250)
T ss_dssp             -------------------CTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH------------HHHTTC-
T ss_pred             -------------------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch------------hhhcCC-
Confidence                               2347999999999999998877   37999999999986542            111111 


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA  266 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~  266 (348)
                        ..+          ...+++++|+|+++++++..+..
T Consensus       202 --~~~----------~~~~~~p~dva~~v~~l~s~~~~  227 (250)
T 3nyw_A          202 --PFK----------DEEMIQPDDLLNTIRCLLNLSEN  227 (250)
T ss_dssp             --CSC----------GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             --Ccc----------cccCCCHHHHHHHHHHHHcCCCc
Confidence              111          12278999999999999987643

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.90  E-value=1e-22  Score=173.98  Aligned_cols=204  Identities=20%  Similarity=0.189  Sum_probs=151.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-cc-CCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KW-TRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      ||++|||||+|+||++++++|+++|++|++++|+..+. .... +. ....++.++.+|++|.+++.++++       ++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            68999999999999999999999999999999986543 2111 10 123478899999999999988876       68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      |++||+||........+.+.++|  ...+++|+.++.++++++...  ....++|++||.....+.+             
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~-------------  146 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEF--HEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIP-------------  146 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCT-------------
T ss_pred             CEEEECCccccccCcccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCC-------------
Confidence            99999999865544333444444  578999999999999988653  1135788887765433211             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                                  ....|+.+|.+.+.+.+.+..+ .++++..++||.|..+.....            .....       
T Consensus       147 ------------~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~------------~~~~~-------  195 (235)
T 3l77_A          147 ------------YGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK------------PGKPK-------  195 (235)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC------------SCCCG-------
T ss_pred             ------------CcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc------------CCccc-------
Confidence                        2347999999999999988544 489999999999877643221            00000       


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCCCC
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMENDRA  266 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~~~  266 (348)
                            ...++.++|+|+++++++..+..
T Consensus       196 ------~~~~~~p~dva~~v~~l~~~~~~  218 (235)
T 3l77_A          196 ------EKGYLKPDEIAEAVRCLLKLPKD  218 (235)
T ss_dssp             ------GGTCBCHHHHHHHHHHHHTSCTT
T ss_pred             ------ccCCCCHHHHHHHHHHHHcCCCC
Confidence                  11278999999999999998754

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.90  E-value=1.8e-22  Score=178.25  Aligned_cols=226  Identities=13%  Similarity=0.022  Sum_probs=159.7

Q ss_pred             CCCCCeEEEeCCCC--hhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANG--YIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatG--fiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++|++|||||+|  +||+++++.|+++|++|++++|+.... ...........+.++.+|++|.+++.++++      
T Consensus        27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34578999999998  999999999999999999999986432 222221112357889999999998887765      


Q ss_pred             -CCCEEEEccccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCC
Q 035965           79 -GCDGVFHVAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 -~~d~Vih~a~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                       ++|++||+||....    ....+.+.++|  ...+++|+.++.++++++...- ...+||++||...+.+.+       
T Consensus       107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~-------  177 (296)
T 3k31_A          107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNF--LTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP-------  177 (296)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT-------
T ss_pred             CCCCEEEECCCcCCcccccCChhhCCHHHH--HHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC-------
Confidence             68999999997653    22223334444  5789999999999999987642 246999999987543221       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        ....|+.||.+.+.+.+.++.+   .++++..++||.|..+..... .. ..........  
T Consensus       178 ------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~-~~~~~~~~~~--  235 (296)
T 3k31_A          178 ------------------HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI-SD-FHYILTWNKY--  235 (296)
T ss_dssp             ------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC-HH-HHHHHHHHHH--
T ss_pred             ------------------CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc-cc-hHHHHHHHHh--
Confidence                              3357999999999999998877   489999999999998764431 11 1111111111  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                       ..+ .++         +..++|+|+++++++....  ..| .+++.+.
T Consensus       236 -~~p-~~r---------~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  273 (296)
T 3k31_A          236 -NSP-LRR---------NTTLDDVGGAALYLLSDLGRGTTGETVHVDCG  273 (296)
T ss_dssp             -HST-TSS---------CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -cCC-CCC---------CCCHHHHHHHHHHHcCCccCCccCCEEEECCC
Confidence             011 122         6689999999999998532  345 4566443

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=1.1e-22  Score=173.90  Aligned_cols=193  Identities=16%  Similarity=0.139  Sum_probs=143.7

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc---------CC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM---------GC   80 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---------~~   80 (348)
                      ++|+||||||+|+||++++++|+++|++|++++|+..+..        ....++.+|++|.+++.++++         ++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc--------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            4679999999999999999999999999999999865421        135677899999988877664         68


Q ss_pred             CEEEEccccCccccc-cccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           81 DGVFHVAASMEFDIN-VKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        81 d~Vih~a~~~~~~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      |+|||+||....... .....++|  ...+++|+.++.++++++...- ..++||++||...+.+.+             
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-------------  138 (236)
T 1ooe_A           74 DGVFCVAGGWAGGSASSKDFVKNA--DLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP-------------  138 (236)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-------------
T ss_pred             CEEEECCcccCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCC-------------
Confidence            999999997543322 22333333  5789999999999999987641 136999999987543211             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC-----CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN-----KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                  +...|+.+|.+.+.+.+.++.+.     +++++.++|+.+.++...           .. .... .  
T Consensus       139 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~-----------~~-~~~~-~--  191 (236)
T 1ooe_A          139 ------------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR-----------KW-MPNA-D--  191 (236)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH-----------HH-STTC-C--
T ss_pred             ------------CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh-----------hc-CCCc-c--
Confidence                        34579999999999999998765     499999999999876211           00 0110 0  


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhc
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLME  262 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~  262 (348)
                                ...++..+|+|++++.++.
T Consensus       192 ----------~~~~~~~~dvA~~i~~~l~  210 (236)
T 1ooe_A          192 ----------HSSWTPLSFISEHLLKWTT  210 (236)
T ss_dssp             ----------GGGCBCHHHHHHHHHHHHH
T ss_pred             ----------ccccCCHHHHHHHHHHHHc
Confidence                      1126788999999996663

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.90  E-value=9.3e-23  Score=178.32  Aligned_cols=225  Identities=13%  Similarity=0.076  Sum_probs=156.0

Q ss_pred             CCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+++||||+  |+||++++++|+++|++|++++|+.... ....+......+.++.+|++|.+++.++++       
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999  9999999999999999999999987511 111111111247889999999998887765       


Q ss_pred             CCCEEEEccccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 GCDGVFHVAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      ++|+|||+||....    ....+.+.++|  ...+++|+.++.++++++...- ..++||++||...+.+.+        
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------  153 (275)
T 2pd4_A           84 SLDFIVHSVAFAPKEALEGSLLETSKSAF--NTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMA--------  153 (275)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT--------
T ss_pred             CCCEEEECCccCccccCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCC--------
Confidence            68999999997643    11112333334  5789999999999999998651 126999999976433211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +...|+.||.+.+.+.+.++.+.   +++++.++||.|.++..... .............   
T Consensus       154 -----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~---  212 (275)
T 2pd4_A          154 -----------------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI-ADFRMILKWNEIN---  212 (275)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHH---
T ss_pred             -----------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc-cccHHHHHHHHhc---
Confidence                             33579999999999999988774   89999999999998753321 1101111111110   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~~  275 (348)
                       .+ .++         +.+++|+|+++++++....  ..|. +++.+.
T Consensus       213 -~p-~~~---------~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg  249 (275)
T 2pd4_A          213 -AP-LRK---------NVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  249 (275)
T ss_dssp             -ST-TSS---------CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CC-cCC---------CCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence             11 111         5689999999999987532  3454 455443

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.90  E-value=5e-22  Score=174.67  Aligned_cols=237  Identities=19%  Similarity=0.120  Sum_probs=159.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--------------ccc----cccCCCCCeEEEEccCCCc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--------------QIF----SKWTRSDRLRLFQADLQVE   70 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--------------~~~----~~~~~~~~~~~~~~Dl~d~   70 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+....              ...    .......++.++.+|++|.
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            4578999999999999999999999999999999873210              100    0111235788999999999


Q ss_pred             chHHHhhc-------CCCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccc
Q 035965           71 GSFDKAVM-------GCDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSV  138 (348)
Q Consensus        71 ~~~~~~~~-------~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~  138 (348)
                      +++.++++       ++|++||+||...... ..+.+.++|  ...+++|+.++.++++++...    +...+||++||.
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDW--TEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV  166 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence            98887765       6899999999765432 223334444  578999999999999987643    224689999998


Q ss_pred             eeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCC
Q 035965          139 STITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVP  215 (348)
Q Consensus       139 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~  215 (348)
                      ..+.+.+                         ....|+.||.+.+.+.+.++.+   +++++..++||.|..+.....  
T Consensus       167 ~~~~~~~-------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--  219 (286)
T 3uve_A          167 GGLKAYP-------------------------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNE--  219 (286)
T ss_dssp             GGTSCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSH--
T ss_pred             hhccCCC-------------------------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccccc--
Confidence            7543221                         3357999999999999999877   579999999999998864321  


Q ss_pred             chHHHHHhhhcCCC-CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          216 SSIQVLLSPITGDS-KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       216 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .....+........ ..+......... ..+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  282 (286)
T 3uve_A          220 GTFKMFRPDLENPGPDDMAPICQMFHT-LPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG  282 (286)
T ss_dssp             HHHHHHCTTSSSCCHHHHHHHHHTTCS-SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             chhhhccccccccchhhHHHHHHhhhc-cCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCc
Confidence            00000100000000 000000000000 11347899999999999987543  345 4566443

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.89  E-value=2.7e-22  Score=177.43  Aligned_cols=237  Identities=20%  Similarity=0.141  Sum_probs=159.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc------------c-cc-ccccCCCCCeEEEEccCCCcchHH
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK------------L-QI-FSKWTRSDRLRLFQADLQVEGSFD   74 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~------------~-~~-~~~~~~~~~~~~~~~Dl~d~~~~~   74 (348)
                      +++|++|||||+|+||.++++.|+++|++|++++|+...            . .. ..+.....++.++.+|++|.+++.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            356899999999999999999999999999999987321            1 00 011112357899999999999888


Q ss_pred             Hhhc-------CCCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeee
Q 035965           75 KAVM-------GCDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTIT  142 (348)
Q Consensus        75 ~~~~-------~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~  142 (348)
                      ++++       ++|++||+||...... ..+.+.++|  ...+++|+.++..+++++...    +...+||++||...+.
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~  183 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTW--RDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR  183 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence            7765       6999999999765433 223344444  588999999999999987543    2257999999987543


Q ss_pred             ecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHH
Q 035965          143 AKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQ  219 (348)
Q Consensus       143 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~  219 (348)
                      +.+                         ....|+.||.+.+.+.+.++.+.   |+++..++||.|.++.....  ....
T Consensus       184 ~~~-------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~  236 (299)
T 3t7c_A          184 GAE-------------------------NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNE--PTYR  236 (299)
T ss_dssp             CCT-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH--HHHH
T ss_pred             CCC-------------------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcccccc--chhh
Confidence            221                         33579999999999999998774   79999999999998864321  0000


Q ss_pred             HHHhhhcCCC-CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          220 VLLSPITGDS-KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       220 ~~~~~~~~~~-~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .+........ ............ ..+.+..++|+|+++++++....  ..| .+++.+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~-~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  295 (299)
T 3t7c_A          237 MFRPDLENPTVEDFQVASRQMHV-LPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG  295 (299)
T ss_dssp             HHCTTSSSCCHHHHHHHHHHHSS-SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhhhhhccchhhHHHHHhhhhcc-cCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCC
Confidence            0000000000 000000000000 01337799999999999997543  345 4555443

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.89  E-value=7.4e-23  Score=179.75  Aligned_cols=219  Identities=17%  Similarity=0.169  Sum_probs=155.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC---eEEEEEcCCCcc-cccccc---CCCCCeEEEEccCCCcchHHHhhc----
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY---IVHATVRDPGKL-QIFSKW---TRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~---~V~~~~r~~~~~-~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      ++|++|||||+|+||+++++.|+++|+   +|++++|+..+. ......   ....++.++.+|++|.+++.++++    
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999988   999999986543 221111   113468899999999999988775    


Q ss_pred             ---CCCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCC
Q 035965           79 ---GCDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                         ++|+|||+||.... ....+.+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+.+     
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~-----  183 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDI--QDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAYP-----  183 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT-----
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCCC-----
Confidence               58999999997542 22223334444  5789999999999999884    334 57999999987543221     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          ....|+.||.+.+.+.+.++.+   .|+++..++||.|..+...           ....+
T Consensus       184 --------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~-----------~~~~~  232 (287)
T 3rku_A          184 --------------------TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL-----------VRYRG  232 (287)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH-----------HHTTT
T ss_pred             --------------------CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc-----------ccccC
Confidence                                3357999999999999999988   5899999999999876310           00000


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEe
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICC  273 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~  273 (348)
                      ......  ...    .....+.++|+|+++++++..+..   ++.+++.
T Consensus       233 ~~~~~~--~~~----~~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~  275 (287)
T 3rku_A          233 NEEQAK--NVY----KDTTPLMADDVADLIVYATSRKQNTVIADTLIFP  275 (287)
T ss_dssp             CHHHHH--HHH----TTSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEE
T ss_pred             cHHHHH--Hhh----cccCCCCHHHHHHHHHHHhCCCCCeEecceEEee
Confidence            000000  000    011145899999999999987654   3345444

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.89  E-value=3.7e-22  Score=169.87  Aligned_cols=214  Identities=16%  Similarity=0.121  Sum_probs=158.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      |.|+||||||++.||+++++.|+++|++|++++|+..+. ....   ...++.++.+|++|++++.++++       ++|
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD   77 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK---ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID   77 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT---TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            458999999999999999999999999999999986544 2222   23578899999999988877664       689


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ++||+||........+.+.++|  +..+++|+.++..+.+++...  ....++|++||.....+.+              
T Consensus        78 iLVNNAG~~~~~~~~~~~~e~~--~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~--------------  141 (247)
T 3ged_A           78 VLVNNACRGSKGILSSLLYEEF--DYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEP--------------  141 (247)
T ss_dssp             EEEECCCCCCCCGGGTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCT--------------
T ss_pred             EEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCC--------------
Confidence            9999999876655555666666  689999999999998877643  1137999999987543222              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                                 ....|+.||.....+.+.++.+.  ++++..+.||.|-.+.....    ....   .    ..+| .++
T Consensus       142 -----------~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~----~~~~---~----~~~P-l~R  198 (247)
T 3ged_A          142 -----------DSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF----TQED---C----AAIP-AGK  198 (247)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C----CHHH---H----HTST-TSS
T ss_pred             -----------CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHH----HHHH---H----hcCC-CCC
Confidence                       23479999999999999988774  69999999999866543221    1111   1    1122 344


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEec
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCV  274 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~  274 (348)
                               +...+|+|+++++++......|+.+..+
T Consensus       199 ---------~g~pediA~~v~fL~s~~~iTG~~i~VD  226 (247)
T 3ged_A          199 ---------VGTPKDISNMVLFLCQQDFITGETIIVD  226 (247)
T ss_dssp             ---------CBCHHHHHHHHHHHHHCSSCCSCEEEES
T ss_pred             ---------CcCHHHHHHHHHHHHhCCCCCCCeEEEC
Confidence                     4489999999999998655566544333

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.89  E-value=9.3e-23  Score=177.31  Aligned_cols=230  Identities=16%  Similarity=0.056  Sum_probs=159.0

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-c--CCCCCeEEEEccCCCcchHHHhhc----
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-W--TRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~--~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+..+. ..... .  ....++.++.+|++|.+++.++++    
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            356678999999999999999999999999999999986543 21111 1  112348899999999988877664    


Q ss_pred             ---CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 ---GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                         ++|++||+||........+.+.++|  ...+++|+.++.++++++...   ....+||++||...+.+.+       
T Consensus        84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  154 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRVSTFAETTDEAW--SEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEP-------  154 (265)
T ss_dssp             HHCSCSEEEECCCCCCCBCTTTCCHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCT-------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCC-------
Confidence               6899999999865544334444555  578999999999999988542   1257899999987543221       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCC------chHHHHHh
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVP------SSIQVLLS  223 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~------~~~~~~~~  223 (348)
                                        ....|+.||.+.+.+.+.++.+.   |+++..++||.|.++.......      .....+..
T Consensus       155 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  216 (265)
T 3lf2_A          155 ------------------HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTA  216 (265)
T ss_dssp             ------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHH
T ss_pred             ------------------CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHH
Confidence                              34579999999999999988774   7999999999998763110000      00000000


Q ss_pred             hhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          224 PITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                      .... ....+ .+         .+..++|+|+++++++....  ..|. +++.+
T Consensus       217 ~~~~-~~~~p-~~---------r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG  259 (265)
T 3lf2_A          217 QLAR-NKQIP-LG---------RLGKPIEAARAILFLASPLSAYTTGSHIDVSG  259 (265)
T ss_dssp             HHHH-HTTCT-TC---------SCBCHHHHHHHHHHHHSGGGTTCCSEEEEESS
T ss_pred             HHhh-ccCCC-cC---------CCcCHHHHHHHHHHHhCchhcCcCCCEEEECC
Confidence            0000 00011 12         26699999999999987533  3554 45544

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.89  E-value=3.4e-22  Score=173.94  Aligned_cols=226  Identities=12%  Similarity=0.039  Sum_probs=158.8

Q ss_pred             CCCCCeEEEeCCCCh--hHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC--CCCCeEEEEccCCCcchHHHhhc----
Q 035965            8 TGRSKTFCVTGANGY--IGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT--RSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGf--iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      .+++|+++||||+|+  ||++++++|+++|++|++++|+.... .......  ...++.++.+|++|.+++.++++    
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            456789999999998  99999999999999999999975432 2211111  12368999999999998887765    


Q ss_pred             ---CCCEEEEccccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCC
Q 035965           79 ---GCDGVFHVAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                         .+|++||+|+....    ....+.+.++|  ...+++|+.++.++++++...- ...+||++||...+.+.+     
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----  156 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGF--LLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMP-----  156 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT-----
T ss_pred             HhCCeeEEEEccccccccccccchhhccHHHH--HHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCC-----
Confidence               68999999997652    22222333333  4789999999999999998652 136899999987543221     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          ....|+.||.+.+.+.+.++.+   .++++..++||.|..+....... ...........
T Consensus       157 --------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~  215 (266)
T 3oig_A          157 --------------------NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD-FNSILKDIEER  215 (266)
T ss_dssp             --------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-HHHHHHHHHHH
T ss_pred             --------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc-hHHHHHHHHhc
Confidence                                3357999999999999998876   37999999999998875433211 11111111100


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                          .          ..+.+.+++|+|+++++++....  ..| .+++.+.
T Consensus       216 ----~----------~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG  252 (266)
T 3oig_A          216 ----A----------PLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSG  252 (266)
T ss_dssp             ----S----------TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----C----------CCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCC
Confidence                1          11226799999999999998643  344 4566543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.89  E-value=4e-23  Score=177.58  Aligned_cols=213  Identities=20%  Similarity=0.188  Sum_probs=136.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcch---HHHhh---cCC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGS---FDKAV---MGC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~---~~~   80 (348)
                      .+++|++|||||+|+||++++++|++ |+.|++++|+..+. ....    ..++.++.+|+++...   +.+.+   .++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----IEGVEPIESDIVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----STTEEEEECCHHHHHHTSSSCGGGTTCSCC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----hcCCcceecccchHHHHHHHHHHHHhcCCC
Confidence            34578999999999999999999987 99999999986544 2222    2468999999988643   22222   268


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      |+|||+||..........+.++|  ...+++|+.++..+++++...  ....++|++||...+.+.+             
T Consensus        77 d~lv~~Ag~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------  141 (245)
T 3e9n_A           77 DTLVHAAAVARDTTIEAGSVAEW--HAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHP-------------  141 (245)
T ss_dssp             SEEEECC----------CHHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------------------
T ss_pred             CEEEECCCcCCCCchhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCC-------------
Confidence            99999999865544333333444  578999999988888877532  0126899999987654321             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSIL  235 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (348)
                                  +...|+.||.+.+.+.+.++.+   .++++..++||.|.++.......           .....+   
T Consensus       142 ------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----------~~~~~~---  195 (245)
T 3e9n_A          142 ------------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMD-----------SQGTNF---  195 (245)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhh-----------hhhccc---
Confidence                        3357999999999999998876   57999999999998875332100           000011   


Q ss_pred             cccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe
Q 035965          236 SSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC  273 (348)
Q Consensus       236 ~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~  273 (348)
                             ..+.+++++|+|++++++++.+..+.+|++.
T Consensus       196 -------~~~~~~~p~dvA~~i~~l~~~~~~~~~~~i~  226 (245)
T 3e9n_A          196 -------RPEIYIEPKEIANAIRFVIDAGETTQITNVD  226 (245)
T ss_dssp             -------CCGGGSCHHHHHHHHHHHHTSCTTEEEEEEE
T ss_pred             -------ccccCCCHHHHHHHHHHHHcCCCccceeeeE
Confidence                   1233789999999999999988776677654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=3.3e-23  Score=180.40  Aligned_cols=228  Identities=16%  Similarity=0.074  Sum_probs=151.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccC--CCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWT--RSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +++|+++||||+|+||+++++.|+++|++|++++|+..+. ... .+..  ...++.++.+|++|.+++.++++      
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999976543 111 1111  12358899999999998887765      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHH----HHhhcC--CcceEEEeccceeeeecCCCCCCC
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLK----ACLKSE--SVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~----~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                       .+|+|||+||......         . ...+++|+.++..+++    .+++.+  ..++||++||...+.+.+      
T Consensus        85 g~id~lv~~Ag~~~~~~---------~-~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  148 (267)
T 2gdz_A           85 GRLDILVNNAGVNNEKN---------W-EKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA------  148 (267)
T ss_dssp             SCCCEEEECCCCCCSSS---------H-HHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT------
T ss_pred             CCCCEEEECCCCCChhh---------H-HHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC------
Confidence             4799999999753211         2 4788999886665554    444432  147899999987543211      


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHH-----HhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhc
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFA-----NENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPIT  226 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~  226 (348)
                                         +...|+.||.+.+.+.+.++     ...+++++.++|+.|.++..... ... ...... .
T Consensus       149 -------------------~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~-~~~~~~-~  206 (267)
T 2gdz_A          149 -------------------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESI-EKE-ENMGQY-I  206 (267)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGG-GCH-HHHGGG-G
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcc-ccc-cccchh-h
Confidence                               23479999999999988742     23689999999999987632110 000 000000 0


Q ss_pred             CCCCcc-ccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCc-eEEEec-cCcChHH
Q 035965          227 GDSKFF-SILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQG-QYICCV-KSCPISE  281 (348)
Q Consensus       227 ~~~~~~-~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~-~y~~~~-~~~s~~e  281 (348)
                      .....+ ...+..       .+++++|+|+++++++......| .+++++ +..++.|
T Consensus       207 ~~~~~~~~~~~~~-------~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          207 EYKDHIKDMIKYY-------GILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             GGHHHHHHHHHHH-------CCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             hHHHHHHHHhccc-------cCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence            000000 001112       27899999999999998765544 566654 4566554

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.89  E-value=1.2e-22  Score=175.44  Aligned_cols=222  Identities=19%  Similarity=0.168  Sum_probs=154.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      |+|+++||||+|+||++++++|+++|  +.|++++|+..+. ......  ..++.++.+|++|.+++.++++       +
T Consensus         1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (254)
T 3kzv_A            1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY--GDRFFYVVGDITEDSVLKQLVNAAVKGHGK   78 (254)
T ss_dssp             -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH--GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            35899999999999999999999985  7899999976543 222111  2368899999999998887765       6


Q ss_pred             CCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           80 CDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        80 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +|++||+||.... ....+.+.++|  ...+++|+.++.++++++.    +.+  ++||++||...+.+.+         
T Consensus        79 id~lvnnAg~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~~---------  145 (254)
T 3kzv_A           79 IDSLVANAGVLEPVQNVNEIDVNAW--KKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYFS---------  145 (254)
T ss_dssp             CCEEEEECCCCCCCTTTTSCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSSC---------
T ss_pred             ccEEEECCcccCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCCC---------
Confidence            8999999997543 22223344444  5789999999999999884    333  7999999987543211         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC-CCcEEEEecCccccCCCCCCCCch-----HHHHHhhhcCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN-KIDLVSVITTTVAGPFLTSSVPSS-----IQVLLSPITGD  228 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~~~-----~~~~~~~~~~~  228 (348)
                                      +...|+.||.+.+.+.+.++.+. ++++..++||.|..+.........     .......+.. 
T Consensus       146 ----------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-  208 (254)
T 3kzv_A          146 ----------------SWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRG-  208 (254)
T ss_dssp             ----------------CSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHH-
T ss_pred             ----------------CcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHH-
Confidence                            34579999999999999998875 899999999999988644321100     0000000000 


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC---CCce-EEEecc
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR---AQGQ-YICCVK  275 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~-y~~~~~  275 (348)
                        ..          ..+.+.+++|+|+++++++....   ..|. +++.++
T Consensus       209 --~~----------~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~  247 (254)
T 3kzv_A          209 --LK----------ENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDP  247 (254)
T ss_dssp             --HH----------TTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCG
T ss_pred             --HH----------hcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCc
Confidence              00          12337799999999999987653   3554 455443

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.89  E-value=8.8e-23  Score=178.84  Aligned_cols=217  Identities=15%  Similarity=0.118  Sum_probs=150.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccC-CCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWT-RSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..+. .... +.. ....+.++.+|++|.+++.++++       
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999999999986543 2111 100 11235899999999998877765       


Q ss_pred             CCCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhc----C-CcceEEEeccceeeeecCCCCCCCC
Q 035965           79 GCDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----E-SVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 ~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      .+|+|||+||.... ....+.+.++|  ...+++|+.++..+++++...    + ...+||++||...+.+.+       
T Consensus       111 ~iD~lvnnAG~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~-------  181 (281)
T 4dry_A          111 RLDLLVNNAGSNVPPVPLEEVTFEQW--NGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRP-------  181 (281)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCT-------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCC-------
Confidence            57999999997543 22223333444  578999999998888877643    1 146999999987543211       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        +...|+.||.+.+.+.+.++.+   +++++..++||.|..+.......        ......
T Consensus       182 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--------~~~~~~  235 (281)
T 4dry_A          182 ------------------NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST--------GVLQAN  235 (281)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C--------EEECTT
T ss_pred             ------------------CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc--------hhhhhh
Confidence                              3457999999999999998876   58999999999998764322100        000000


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceE
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQY  270 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y  270 (348)
                      ...+          ...++.++|+|+++++++..+....+.
T Consensus       236 ~~~~----------~~~~~~pedvA~~v~fL~s~~~~~~i~  266 (281)
T 4dry_A          236 GEVA----------AEPTIPIEHIAEAVVYMASLPLSANVL  266 (281)
T ss_dssp             SCEE----------ECCCBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred             hccc----------ccCCCCHHHHHHHHHHHhCCCccCccc
Confidence            0111          112779999999999999988665443

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.89  E-value=9e-22  Score=176.99  Aligned_cols=215  Identities=15%  Similarity=0.150  Sum_probs=155.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc--------ccccCCCCCeEEEEccCCCcchHHHhhc-
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI--------FSKWTRSDRLRLFQADLQVEGSFDKAVM-   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~--------~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   78 (348)
                      +++|+||||||+|+||.+++++|+++|++|++++|+..+. ..        ........++.++.+|++|.+++.++++ 
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999999987642 11        0011123468899999999998887765 


Q ss_pred             ------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCC
Q 035965           79 ------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSG  148 (348)
Q Consensus        79 ------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  148 (348)
                            ++|+|||+||........+.+.++|  ...+++|+.++.++++++..    .+ ..+||++||...+.+...  
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~~~--  197 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKRL--DLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPVWF--  197 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHH--HHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGGGT--
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCCCC--
Confidence                  7999999999865544344444444  57899999999999999853    33 579999999875432111  


Q ss_pred             CCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhc
Q 035965          149 EWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPIT  226 (348)
Q Consensus       149 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~  226 (348)
                                           .+...|+.||.+.+.+.+.++.+.  ++++..+.|+.+....           +.+.+.
T Consensus       198 ---------------------~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~-----------~~~~~~  245 (346)
T 3kvo_A          198 ---------------------KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA-----------AMDMLG  245 (346)
T ss_dssp             ---------------------SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH-----------HHHHHC
T ss_pred             ---------------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH-----------HHHhhc
Confidence                                 134579999999999999998874  7999999998533321           111222


Q ss_pred             CCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC-CCceEEEe
Q 035965          227 GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR-AQGQYICC  273 (348)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~-~~~~y~~~  273 (348)
                      +.. .   .+         -+..++|+|+++++++.... ..|.+++.
T Consensus       246 ~~~-~---~~---------r~~~pedvA~~v~~L~s~~~~itG~~ivd  280 (346)
T 3kvo_A          246 GPG-I---ES---------QCRKVDIIADAAYSIFQKPKSFTGNFVID  280 (346)
T ss_dssp             C---C---GG---------GCBCTHHHHHHHHHHHTSCTTCCSCEEEH
T ss_pred             ccc-c---cc---------cCCCHHHHHHHHHHHHhcCCCCCceEEEC
Confidence            211 1   11         26689999999999998732 35665543

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.89  E-value=2.6e-22  Score=172.67  Aligned_cols=207  Identities=17%  Similarity=0.235  Sum_probs=145.2

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~V   83 (348)
                      |+++||||+|+||+++++.|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++       ++|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL--GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            5799999999999999999999999999999986543 221111  1368899999999999888765       58999


Q ss_pred             EEccccCc-cccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           84 FHVAASME-FDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        84 ih~a~~~~-~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      ||+||... .....+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+.+             
T Consensus        79 vnnAg~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-------------  142 (248)
T 3asu_A           79 VNNAGLALGMEPAHKASVEDW--ETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYA-------------  142 (248)
T ss_dssp             EECCCCCCCCSCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT-------------
T ss_pred             EECCCcCCCCCchhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCCC-------------
Confidence            99999753 222222333334  57899999999999988863    34 57999999987532211             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCcccc-CCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAG-PFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                  +...|+.||.+.+.+.+.++.+.   ++++..++||.|.| +.......           +...... 
T Consensus       143 ------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~-----------~~~~~~~-  198 (248)
T 3asu_A          143 ------------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFK-----------GDDGKAE-  198 (248)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------------
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhccc-----------CchHHHH-
Confidence                        34579999999999999988773   79999999999995 43211000           0000000 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                       ...    .....+.++|+|+++++++..+.
T Consensus       199 -~~~----~~~~~~~p~dvA~~v~~l~s~~~  224 (248)
T 3asu_A          199 -KTY----QNTVALTPEDVSEAVWWVSTLPA  224 (248)
T ss_dssp             -----------CCBCHHHHHHHHHHHHHSCT
T ss_pred             -HHH----hccCCCCHHHHHHHHHHHhcCCc
Confidence             000    01124689999999999998643

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.89  E-value=2.8e-22  Score=174.78  Aligned_cols=208  Identities=17%  Similarity=0.221  Sum_probs=144.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcC-------CCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMG-------CDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-------~d~V   83 (348)
                      |++|||||+|+||++++++|+++|++|++++|+..+. ..........++.++.+|++|.+++.++++.       +|+|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            7899999999999999999999999999999986543 2211111113688999999999998887754       5999


Q ss_pred             EEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcc-eEEEeccceeeeecCCCCCCCCcccCC
Q 035965           84 FHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVK-RVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        84 ih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ||+||.... ....+.+.++|  ...+++|+.++.++++++.    +.+ .+ +||++||...+.+.+            
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~~------------  166 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDW--DTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPYP------------  166 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCCT------------
T ss_pred             EECCCCCCCCCCcccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCCC------------
Confidence            999997543 22223333444  5789999999888877765    334 46 999999987542211            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc-
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS-  233 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-  233 (348)
                                   ....|+.+|.+.+.+.+.++.+   .+++++.++||.|.++.......           +...... 
T Consensus       167 -------------~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-----------~~~~~~~~  222 (272)
T 2nwq_A          167 -------------GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFG-----------GDQARYDK  222 (272)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----------------------------
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccc-----------cchHHHHH
Confidence                         3357999999999999998876   47999999999998875321100           0000000 


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                      ....       ..++..+|+|+++++++..+.
T Consensus       223 ~~~~-------~~~~~pedvA~~v~~l~s~~~  247 (272)
T 2nwq_A          223 TYAG-------AHPIQPEDIAETIFWIMNQPA  247 (272)
T ss_dssp             ---C-------CCCBCHHHHHHHHHHHHTSCT
T ss_pred             hhcc-------CCCCCHHHHHHHHHHHhCCCc
Confidence            0000       114689999999999998653

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.89  E-value=1e-21  Score=169.82  Aligned_cols=226  Identities=15%  Similarity=0.128  Sum_probs=157.6

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC-cc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG-KL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~-~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      ++++|+++||||+|+||++++++|+++|++|+++.++.. +. ... .+.....++.++.+|++|.+++..+++      
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999998755433 22 111 111223468889999999988776654      


Q ss_pred             -------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCC
Q 035965           79 -------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 -------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                             .+|++||+||..........+.++|  ...+++|+.++.++++++... ....+||++||...+.+.+     
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-----  156 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFF--DRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP-----  156 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCT-----
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHH--HHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCC-----
Confidence                   2899999999765443333333334  478999999999999999765 1246899999987543221     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          ....|+.||.+.+.+.+.++.+   .++++..++||.+..+..........  .......
T Consensus       157 --------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~~  214 (255)
T 3icc_A          157 --------------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPM--MKQYATT  214 (255)
T ss_dssp             --------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHH--HHHHHHH
T ss_pred             --------------------CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHH--HHHhhhc
Confidence                                3357999999999999998877   48999999999998876443211110  0111000


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                      .   .          ..+.+.+++|+|+++.+++....  ..| .+++.+.
T Consensus       215 ~---~----------~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG  252 (255)
T 3icc_A          215 I---S----------AFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG  252 (255)
T ss_dssp             T---S----------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             c---C----------CcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCC
Confidence            0   0          12236799999999999886542  344 4565443

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.89  E-value=3.2e-22  Score=176.30  Aligned_cols=225  Identities=10%  Similarity=-0.002  Sum_probs=155.5

Q ss_pred             CCCCeEEEeCCCCh--hHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGY--IGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGf--iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|++|||||+|+  ||+++++.|+++|++|++++|+.... ..........++.++.+|++|.+++.++++       
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            45689999999998  99999999999999999999975322 111111112368899999999998887765       


Q ss_pred             CCCEEEEccccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 GCDGVFHVAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 ~~d~Vih~a~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      ++|++||+||....    ....+.+.++|  ...+++|+.++.++++++...- ...+||++||...+.+.+        
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~--------  178 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANF--TNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP--------  178 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT--------
T ss_pred             CCCEEEECCccCCcccccccccccCHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC--------
Confidence            68999999997642    22223333444  5789999999999999987631 246999999987543321        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       ....|+.||.+.+.+.+.++.+   .++++..++||.|.++....... ... .......   
T Consensus       179 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~-~~~~~~~---  236 (293)
T 3grk_A          179 -----------------NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGD-FRY-ILKWNEY---  236 (293)
T ss_dssp             -----------------TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CC-HHH-HHHHHHH---
T ss_pred             -----------------chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccc-hHH-HHHHHHh---
Confidence                             2347999999999999998877   47999999999999875432111 111 1111110   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~~  275 (348)
                      ..+          .+.+..++|+|+++++++....  ..|. +++.+.
T Consensus       237 ~~p----------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (293)
T 3grk_A          237 NAP----------LRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG  274 (293)
T ss_dssp             HST----------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCC----------CCCCCCHHHHHHHHHHHcCccccCCcceEEEECCC
Confidence            011          1226689999999999988543  3454 566543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.89  E-value=5.5e-22  Score=170.03  Aligned_cols=197  Identities=13%  Similarity=0.111  Sum_probs=145.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc---------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM---------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---------~   79 (348)
                      .++|+|+||||+|+||++++++|+++|++|++++|+..+..        ....++.+|++|.+++.++++         +
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc--------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            34689999999999999999999999999999999865321        135677899999988877664         6


Q ss_pred             CCEEEEccccCccccc-cccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           80 CDGVFHVAASMEFDIN-VKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~-~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|+|||+||....... .....++|  ...+++|+.++..+++++...- ..++||++||...+.+.+            
T Consensus        77 iD~lv~~Ag~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  142 (241)
T 1dhr_A           77 VDAILCVAGGWAGGNAKSKSLFKNC--DLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP------------  142 (241)
T ss_dssp             EEEEEECCCCCCCBCTTCTTHHHHH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT------------
T ss_pred             CCEEEEcccccCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC------------
Confidence            8999999997643322 22333333  5789999999999999987641 136999999987543211            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC-----CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN-----KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                   +...|+.+|.+.+.+.+.++.+.     +++++.++||.+-.+..            .......   
T Consensus       143 -------------~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~------------~~~~~~~---  194 (241)
T 1dhr_A          143 -------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN------------RKSMPEA---  194 (241)
T ss_dssp             -------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH------------HHHSTTS---
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc------------cccCcch---
Confidence                         34579999999999999988763     59999999998865421            1000100   


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                                ....++..+|+|+++++++....
T Consensus       195 ----------~~~~~~~~~~vA~~v~~l~~~~~  217 (241)
T 1dhr_A          195 ----------DFSSWTPLEFLVETFHDWITGNK  217 (241)
T ss_dssp             ----------CGGGSEEHHHHHHHHHHHHTTTT
T ss_pred             ----------hhccCCCHHHHHHHHHHHhcCCC
Confidence                      01126789999999999987543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.89  E-value=4.5e-22  Score=174.38  Aligned_cols=224  Identities=16%  Similarity=0.037  Sum_probs=156.5

Q ss_pred             CCCeEEEeCCCCh--hHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965           10 RSKTFCVTGANGY--IGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus        10 ~~~~ilVtGatGf--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      ++|+|+||||+|+  ||++++++|+++|++|++++|+........+.....++.++.+|++|.+++.++++       .+
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL  104 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999977  99999999999999999999987222222221222468899999999998887764       57


Q ss_pred             CEEEEccccCccc----cccc-cccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           81 DGVFHVAASMEFD----INVK-DNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        81 d~Vih~a~~~~~~----~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      |+|||+||.....    ...+ .+.++|  ...+++|+.++.++++++...  ....+||++||...+.+.+        
T Consensus       105 d~li~nAg~~~~~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  174 (280)
T 3nrc_A          105 DAIVHSIAFAPRDQLEGNFIDCVTREGF--SIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMP--------  174 (280)
T ss_dssp             CEEEECCCCCCGGGSSSCHHHHCCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCT--------
T ss_pred             CEEEECCccCCCcccCCccccccCHHHH--HHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCC--------
Confidence            9999999976542    1111 222333  478999999999999988753  1147999999987543211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       +...|+.||.+.+.+.+.++.+   .++++..++||.|..+...... ............   
T Consensus       175 -----------------~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~---  233 (280)
T 3nrc_A          175 -----------------SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS-NFKKMLDYNAMV---  233 (280)
T ss_dssp             -----------------TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT-THHHHHHHHHHH---
T ss_pred             -----------------CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc-chHHHHHHHHhc---
Confidence                             3457999999999999998876   5899999999999987543211 111111111100   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                       .          ..+.+..++|+|+++++++....  ..| .+++.+.
T Consensus       234 -~----------p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG  270 (280)
T 3nrc_A          234 -S----------PLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG  270 (280)
T ss_dssp             -S----------TTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             -C----------CCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCC
Confidence             0          11226789999999999988543  344 4566543

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.88  E-value=5.7e-22  Score=174.51  Aligned_cols=221  Identities=17%  Similarity=0.085  Sum_probs=153.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC-Ccc-ccccc-c-CCCCCeEEEEccCCC----cchHHHhhc-
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP-GKL-QIFSK-W-TRSDRLRLFQADLQV----EGSFDKAVM-   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~-~~~-~~~~~-~-~~~~~~~~~~~Dl~d----~~~~~~~~~-   78 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+. .+. ..... . ....++.++.+|++|    .+++.++++ 
T Consensus        20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~   99 (288)
T 2x9g_A           20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS   99 (288)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence            35678999999999999999999999999999999987 432 21111 0 112468899999999    887776664 


Q ss_pred             ------CCCEEEEccccCccccc-----cc-----cccccchhhhhhhhhHHHHHHHHHHHhhcC---C------cceEE
Q 035965           79 ------GCDGVFHVAASMEFDIN-----VK-----DNIETYVQSTVINPAIQSTLNLLKACLKSE---S------VKRVV  133 (348)
Q Consensus        79 ------~~d~Vih~a~~~~~~~~-----~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~------~~~~v  133 (348)
                            ++|+|||+||.......     ..     .+.++|  ...+++|+.++..+++++...-   .      ..+||
T Consensus       100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv  177 (288)
T 2x9g_A          100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV--AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV  177 (288)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHH--HHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence                  68999999997643322     12     333334  4789999999999999886531   1      36899


Q ss_pred             EeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCC
Q 035965          134 LTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFL  210 (348)
Q Consensus       134 ~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~  210 (348)
                      ++||...+.+.+                         +...|+.||.+.+.+.+.++.+   .++++..++||.|+++. 
T Consensus       178 ~isS~~~~~~~~-------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-  231 (288)
T 2x9g_A          178 NLCDAMVDQPCM-------------------------AFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-  231 (288)
T ss_dssp             EECCTTTTSCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-
T ss_pred             EEecccccCCCC-------------------------CCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-
Confidence            999986432211                         3457999999999999998876   38999999999999986 


Q ss_pred             CCCCCchHHHHHhhhcCCCCccccccccccCCCCcce-eeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          211 TSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIAL-VHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                      .. .+.   ........    .+ .++         + ..++|+|+++++++....  ..|. +.+.+
T Consensus       232 ~~-~~~---~~~~~~~~----~p-~~r---------~~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  281 (288)
T 2x9g_A          232 AM-GEE---EKDKWRRK----VP-LGR---------REASAEQIADAVIFLVSGSAQYITGSIIKVDG  281 (288)
T ss_dssp             TS-CHH---HHHHHHHT----CT-TTS---------SCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cc-ChH---HHHHHHhh----CC-CCC---------CCCCHHHHHHHHHHHhCccccCccCCEEEECc
Confidence            31 111   11111111    11 112         4 689999999999987532  3454 44543

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.88  E-value=1.1e-21  Score=167.75  Aligned_cols=227  Identities=22%  Similarity=0.170  Sum_probs=161.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      ++++|+++||||++.||.++++.|+++|.+|++++|+..+. .... +.....++.++.+|++|++++.++++       
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999999999987644 2221 12234578899999999998887764       


Q ss_pred             CCCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 GCDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 ~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      ++|++|||||.... ....+.+.++|  +..+++|+.++..+++++..    .+ ..+||++||.....+.+        
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~--~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~--------  152 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELW--ERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGF--------  152 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSS--------
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCC--------
Confidence            68999999997543 33334555666  68999999999999887764    34 57999999987543221        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       ....|+.||.....+.+.++.+   +||++..+.||.|-.+.........-........    
T Consensus       153 -----------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~----  211 (254)
T 4fn4_A          153 -----------------AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTK----  211 (254)
T ss_dssp             -----------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHH----
T ss_pred             -----------------CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHh----
Confidence                             2347999999999999998877   4799999999999776432211111100111100    


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~~~~  275 (348)
                      ..+..++         +...+|+|.++++++....  ..|+.+..+.
T Consensus       212 ~~~~~~R---------~g~pediA~~v~fLaSd~a~~iTG~~i~VDG  249 (254)
T 4fn4_A          212 LMSLSSR---------LAEPEDIANVIVFLASDEASFVNGDAVVVDG  249 (254)
T ss_dssp             HHTTCCC---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCCCCCC---------CcCHHHHHHHHHHHhCchhcCCcCCEEEeCC
Confidence            1112344         3479999999999986543  3555444333

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.88  E-value=1.1e-21  Score=175.53  Aligned_cols=222  Identities=17%  Similarity=0.096  Sum_probs=155.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEE-cCCCcc-ccccc-c-CCCCCeEEEEccCCCcc-------------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATV-RDPGKL-QIFSK-W-TRSDRLRLFQADLQVEG-------------   71 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~-r~~~~~-~~~~~-~-~~~~~~~~~~~Dl~d~~-------------   71 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++ |+..+. ..... . ....++.++.+|++|.+             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            3467999999999999999999999999999999 876433 21111 0 11246889999999998             


Q ss_pred             ----hHHHhhc-------CCCEEEEccccCccccccccc--------------cccchhhhhhhhhHHHHHHHHHHHhhc
Q 035965           72 ----SFDKAVM-------GCDGVFHVAASMEFDINVKDN--------------IETYVQSTVINPAIQSTLNLLKACLKS  126 (348)
Q Consensus        72 ----~~~~~~~-------~~d~Vih~a~~~~~~~~~~~~--------------~~~~~~~~~~~~nv~~~~~ll~~~~~~  126 (348)
                          ++.++++       .+|+|||+||..........+              .++|  ...+++|+.++..+++++...
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETAT--ADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHH--HHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence                8877765       689999999976443322222              3334  478999999999999987642


Q ss_pred             ---CC------cceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---C
Q 035965          127 ---ES------VKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---K  194 (348)
Q Consensus       127 ---~~------~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~  194 (348)
                         ..      .++||++||...+.+.+                         +...|+.+|.+.+.+.+.++.+.   +
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~-------------------------~~~~Y~asKaal~~l~~~la~el~~~g  256 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLL-------------------------GYTIYTMAKGALEGLTRSAALELAPLQ  256 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCC-------------------------CcHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence               11      46899999986443211                         33579999999999999988773   8


Q ss_pred             CcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC--CCCce-EE
Q 035965          195 IDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQ-YI  271 (348)
Q Consensus       195 ~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~-y~  271 (348)
                      +++..++||.|.++. .. .+.   ........    ++ .+ .       -+..++|+|+++++++...  ...|. ++
T Consensus       257 Irvn~v~PG~v~T~~-~~-~~~---~~~~~~~~----~p-~~-~-------r~~~pedvA~~v~~l~s~~~~~itG~~i~  318 (328)
T 2qhx_A          257 IRVNGVGPGLSVLVD-DM-PPA---VWEGHRSK----VP-LY-Q-------RDSSAAEVSDVVIFLCSSKAKYITGTCVK  318 (328)
T ss_dssp             EEEEEEEESSBSCCC-CS-CHH---HHHHHHTT----CT-TT-T-------SCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             cEEEEEecCcccCCc-cc-cHH---HHHHHHhh----CC-CC-C-------CCCCHHHHHHHHHHHhCccccCccCcEEE
Confidence            999999999999886 22 111   11111111    11 11 0       1668999999999998643  23454 55


Q ss_pred             Eecc
Q 035965          272 CCVK  275 (348)
Q Consensus       272 ~~~~  275 (348)
                      +.+.
T Consensus       319 vdGG  322 (328)
T 2qhx_A          319 VDGG  322 (328)
T ss_dssp             ESTT
T ss_pred             ECCC
Confidence            5443

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.88  E-value=2.8e-22  Score=175.90  Aligned_cols=220  Identities=16%  Similarity=0.114  Sum_probs=154.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc------CCCE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM------GCDG   82 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~   82 (348)
                      ++|++|||||+|+||++++++|+++|++|++++|+..+. ......  ..++.++.+|++|.+++.++++      ++|+
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~  106 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL--GNRAEFVSTNVTSEDSVLAAIEAANQLGRLRY  106 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHTTSSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHhCCCCe
Confidence            467899999999999999999999999999999987644 222111  2478999999999998887765      5799


Q ss_pred             EEEccc-cCccccc-----cccccccchhhhhhhhhHHHHHHHHHHHhhc---------CCcceEEEeccceeeeecCCC
Q 035965           83 VFHVAA-SMEFDIN-----VKDNIETYVQSTVINPAIQSTLNLLKACLKS---------ESVKRVVLTSSVSTITAKDSS  147 (348)
Q Consensus        83 Vih~a~-~~~~~~~-----~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---------~~~~~~v~~SS~~~~~~~~~~  147 (348)
                      +||+++ .......     ...+.++|  ...+++|+.++.++++++...         +...+||++||...+.+.+  
T Consensus       107 lv~~aag~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  182 (281)
T 3ppi_A          107 AVVAHGGFGVAQRIVQRDGSPADMGGF--TKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI--  182 (281)
T ss_dssp             EEECCCCCCCCCCSBCTTSCBCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT--
T ss_pred             EEEccCcccccccccccccccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC--
Confidence            999944 4332211     12222333  578999999999999987632         1246899999987543221  


Q ss_pred             CCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhh
Q 035965          148 GEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSP  224 (348)
Q Consensus       148 ~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  224 (348)
                                             +...|+.||.+.+.+.+.++.+.   ++++..++||.|..+......+..   ....
T Consensus       183 -----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~---~~~~  236 (281)
T 3ppi_A          183 -----------------------GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEA---LAKF  236 (281)
T ss_dssp             -----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHH---HHHH
T ss_pred             -----------------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHH---HHHH
Confidence                                   33579999999999999888773   799999999999775322111111   1111


Q ss_pred             hcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCce-EEEec
Q 035965          225 ITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQ-YICCV  274 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~-y~~~~  274 (348)
                      ....    +         ..+.+++++|+|+++++++......|. +++.+
T Consensus       237 ~~~~----~---------~~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdG  274 (281)
T 3ppi_A          237 AANI----P---------FPKRLGTPDEFADAAAFLLTNGYINGEVMRLDG  274 (281)
T ss_dssp             HHTC----C---------SSSSCBCHHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             HhcC----C---------CCCCCCCHHHHHHHHHHHHcCCCcCCcEEEECC
Confidence            1111    1         012378999999999999987666665 45544

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.88  E-value=3.7e-22  Score=175.56  Aligned_cols=204  Identities=17%  Similarity=0.131  Sum_probs=146.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cC-CCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WT-RSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~-~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++++|+||||+|+||+++++.|+++|++|++++|+..+. ..... .. ...++.++.+|++|.+++.++++       
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999999999986543 21110 00 11258899999999988877665       


Q ss_pred             CCCEEEEc-cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC--CcceEEEeccceeeeecCCCCCCCCccc
Q 035965           79 GCDGVFHV-AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE--SVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 ~~d~Vih~-a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      ++|+|||+ |+...... ...+.++|  ...+++|+.++.++++++...-  ..++||++||...+.+.+          
T Consensus       106 ~iD~li~naag~~~~~~-~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  172 (286)
T 1xu9_A          106 GLDMLILNHITNTSLNL-FHDDIHHV--RKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP----------  172 (286)
T ss_dssp             SCSEEEECCCCCCCCCC-CCSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT----------
T ss_pred             CCCEEEECCccCCCCcc-ccCCHHHH--HHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCC----------
Confidence            69999999 55543221 12223333  4789999999999999886531  136999999986432211          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC-----CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN-----KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                     +...|+.||.+.|.+++.++.+.     ++++++++||.+..+...           ....+   
T Consensus       173 ---------------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~-----------~~~~~---  223 (286)
T 1xu9_A          173 ---------------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM-----------KAVSG---  223 (286)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH-----------HHSCG---
T ss_pred             ---------------CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH-----------Hhccc---
Confidence                           34579999999999998887654     899999999988654210           00000   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                          ..       ...+++++|+|+.++.+++.+.
T Consensus       224 ----~~-------~~~~~~~~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          224 ----IV-------HMQAAPKEECALEIIKGGALRQ  247 (286)
T ss_dssp             ----GG-------GGGCBCHHHHHHHHHHHHHTTC
T ss_pred             ----cc-------cCCCCCHHHHHHHHHHHHhcCC
Confidence                00       1227899999999999998753

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.88  E-value=4.7e-22  Score=171.77  Aligned_cols=226  Identities=13%  Similarity=0.058  Sum_probs=145.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh----hcCCCEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA----VMGCDGVFH   85 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~----~~~~d~Vih   85 (348)
                      ||++|||||+|+||++++++|+++|++|++++|+..+. ....+.....++.++  |..+.+.+.+.    +.++|+|||
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence            47899999999999999999999999999999986544 221111111233333  44443322221    227999999


Q ss_pred             ccccC-ccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           86 VAASM-EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        86 ~a~~~-~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      +||.. ......+.+.++|  ...+++|+.++.++++++..    .+ .++||++||...+.+.+               
T Consensus        79 nAg~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------------  140 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVEDY--RGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWK---------------  140 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCT---------------
T ss_pred             CCCcCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCCC---------------
Confidence            99976 3332223333344  57899999999999998753    33 57999999986543211               


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                                +...|+.||.+.+.+.+.++.+   .+++++.++|+.|+|+........  . +..   ..+........
T Consensus       141 ----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T--~-~~~---~~~~~~~~~~~  204 (254)
T 1zmt_A          141 ----------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPT--E-PWK---TNPEHVAHVKK  204 (254)
T ss_dssp             ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBH--H-HHT---TCHHHHHHHHH
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCC--c-ccc---cChHHHHHHhc
Confidence                      3357999999999999998876   489999999999999865432111  0 110   00000000000


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCVK  275 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  275 (348)
                         .....-+.+++|+|+++++++....  ..| .+.+.+.
T Consensus       205 ---~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG  242 (254)
T 1zmt_A          205 ---VTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  242 (254)
T ss_dssp             ---HSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             ---cCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence               0011226799999999999987643  244 4555444

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.88  E-value=1.3e-21  Score=170.29  Aligned_cols=223  Identities=16%  Similarity=0.094  Sum_probs=158.3

Q ss_pred             CCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCCCcc---cccccc-CCCCCeEEEEccCCCcchHHHhhc----
Q 035965            9 GRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSKW-TRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         9 ~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      +++|+++||||+  |+||.+++++|+++|++|++++|+..+.   ....+. ....++.++.+|++|.+++.++++    
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            457899999999  9999999999999999999999876532   111111 113578899999999998877765    


Q ss_pred             ---CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCC
Q 035965           79 ---GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                         ++|+|||+||........+.+.++|  ...+++|+.++.++++++.    +.+ ..++|++||...+.+...     
T Consensus        98 ~~g~id~li~nAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~-----  169 (267)
T 3gdg_A           98 DFGQIDAFIANAGATADSGILDGSVEAW--NHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFP-----  169 (267)
T ss_dssp             HTSCCSEEEECCCCCCCSCTTTSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCSS-----
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHH--HHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCCC-----
Confidence               5799999999866544334444444  5789999999999999884    334 579999999775432211     


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCC--CcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENK--IDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        .+...|+.||.+.+.+.+.++.+.+  +++..+.||.|..+..... +.   .....+... 
T Consensus       170 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~-~~---~~~~~~~~~-  226 (267)
T 3gdg_A          170 ------------------QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV-PK---ETQQLWHSM-  226 (267)
T ss_dssp             ------------------SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS-CH---HHHHHHHTT-
T ss_pred             ------------------CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC-CH---HHHHHHHhc-
Confidence                              1345799999999999999998854  8999999999977643221 11   111111111 


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                        .          ..+.+.+++|+|+++++++....  ..|. +++.+
T Consensus       227 --~----------~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdg  262 (267)
T 3gdg_A          227 --I----------PMGRDGLAKELKGAYVYFASDASTYTTGADLLIDG  262 (267)
T ss_dssp             --S----------TTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred             --C----------CCCCCcCHHHHHhHhheeecCccccccCCEEEECC
Confidence              1          12337799999999999987533  3454 55543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.88  E-value=1.6e-21  Score=170.24  Aligned_cols=215  Identities=16%  Similarity=0.165  Sum_probs=153.6

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc--------ccCCCCCeEEEEccCCCcchHHHhh
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS--------KWTRSDRLRLFQADLQVEGSFDKAV   77 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~--------~~~~~~~~~~~~~Dl~d~~~~~~~~   77 (348)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+..+. ....        ......++.++.+|++|.+++.+++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            356689999999999999999999999999999999987542 1100        0111346889999999999887776


Q ss_pred             c-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCC
Q 035965           78 M-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDS  146 (348)
Q Consensus        78 ~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~  146 (348)
                      +       ++|++||+||........+.+.++|  ...+++|+.++..+++++..    .+ ..+||++||...+.+...
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~  158 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRF--DLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAWW  158 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHH--HHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHHH
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcccCCHHHH--HHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCC
Confidence            5       6899999999865544334444445  57899999999999998754    33 579999999875432100


Q ss_pred             CCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHh
Q 035965          147 SGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLS  223 (348)
Q Consensus       147 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~  223 (348)
                                             ++...|+.||.+.+.+.+.++.+   .++++..++||.+......           .
T Consensus       159 -----------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~-----------~  204 (274)
T 3e03_A          159 -----------------------GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI-----------N  204 (274)
T ss_dssp             -----------------------HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC---------------
T ss_pred             -----------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh-----------h
Confidence                                   03357999999999999998876   4799999999954332111           0


Q ss_pred             hhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC--CceEEE
Q 035965          224 PITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA--QGQYIC  272 (348)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~--~~~y~~  272 (348)
                      ...+..              ...+..++|+|+++++++.....  .|.++.
T Consensus       205 ~~~~~~--------------~~~~~~pedvA~~v~~l~s~~~~~itG~~i~  241 (274)
T 3e03_A          205 MLPGVD--------------AAACRRPEIMADAAHAVLTREAAGFHGQFLI  241 (274)
T ss_dssp             ---CCC--------------GGGSBCTHHHHHHHHHHHTSCCTTCCSCEEE
T ss_pred             hccccc--------------ccccCCHHHHHHHHHHHhCccccccCCeEEE
Confidence            101100              11166899999999999976432  555543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.88  E-value=1.7e-21  Score=167.60  Aligned_cols=204  Identities=20%  Similarity=0.199  Sum_probs=146.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-cC-CCCCeEEEEccC--CCcchHHHhhc----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-WT-RSDRLRLFQADL--QVEGSFDKAVM----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-~~-~~~~~~~~~~Dl--~d~~~~~~~~~----   78 (348)
                      .+++|+++||||+|+||++++++|+++|++|++++|+..+. ..... .. ...++.++.+|+  +|.+++.++++    
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999986543 21111 11 113567787777  88887776654    


Q ss_pred             ---CCCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCC
Q 035965           79 ---GCDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                         ++|+|||+||...... ..+.+.++|  ...+++|+.++..+++++.    +.+ .++||++||...+.+..     
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-----  162 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDF--MQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRA-----  162 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCCT-----
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCCC-----
Confidence               6899999999753322 222333334  5789999999999999884    344 67999999976543211     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhc
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPIT  226 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~  226 (348)
                                          +...|+.+|.+.+.+.+.++.+    .++++..++||.|..+.            .....
T Consensus       163 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~------------~~~~~  210 (247)
T 3i1j_A          163 --------------------NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM------------RAQAY  210 (247)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH------------HHHHS
T ss_pred             --------------------CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc------------chhcc
Confidence                                3357999999999999998876    47999999999876541            11111


Q ss_pred             CCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          227 GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ....             ...+...+|+|+++++++...
T Consensus       211 ~~~~-------------~~~~~~p~dva~~~~~l~s~~  235 (247)
T 3i1j_A          211 PDEN-------------PLNNPAPEDIMPVYLYLMGPD  235 (247)
T ss_dssp             TTSC-------------GGGSCCGGGGTHHHHHHHSGG
T ss_pred             cccC-------------ccCCCCHHHHHHHHHHHhCch
Confidence            1111             112567899999999998754

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.87  E-value=1.2e-21  Score=165.94  Aligned_cols=223  Identities=16%  Similarity=0.093  Sum_probs=161.4

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVF   84 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vi   84 (348)
                      ...++|+++||||++.||.++++.|+++|.+|++.+|+..+...........++.++.+|++|++++.++++  ++|++|
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV   84 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILV   84 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            357789999999999999999999999999999999976533111122234578899999999988887765  589999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      ||||........+.+.++|  +..+++|+.++..+++++..    .+...+||++||.....+.+               
T Consensus        85 NNAGi~~~~~~~~~~~~~w--~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~---------------  147 (247)
T 4hp8_A           85 NNAGIIRRADSVEFSELDW--DEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGI---------------  147 (247)
T ss_dssp             ECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCS---------------
T ss_pred             ECCCCCCCCCcccccHHHH--HHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCC---------------
Confidence            9999876665556666777  68999999999999987543    23347999999987543221               


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                                ....|+.||.....+.+.++.+   +||++..+.||.|-.|........  ......+..   .+| .++
T Consensus       148 ----------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~--~~~~~~~~~---~~P-lgR  211 (247)
T 4hp8_A          148 ----------RVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRAD--AARNKAILE---RIP-AGR  211 (247)
T ss_dssp             ----------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS--HHHHHHHHT---TCT-TSS
T ss_pred             ----------CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccC--HHHHHHHHh---CCC-CCC
Confidence                      2347999999999999998877   479999999999876532110000  001111111   122 445


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                      +.         ..+|+|.++++++....  ..|..+
T Consensus       212 ~g---------~peeiA~~v~fLaSd~a~~iTG~~i  238 (247)
T 4hp8_A          212 WG---------HSEDIAGAAVFLSSAAADYVHGAIL  238 (247)
T ss_dssp             CB---------CTHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             Cc---------CHHHHHHHHHHHhCchhcCCcCCeE
Confidence            44         88999999999887543  355543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.87  E-value=1e-20  Score=159.90  Aligned_cols=217  Identities=14%  Similarity=0.104  Sum_probs=156.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~Vih   85 (348)
                      .++|+++||||++.||.++++.|+++|++|++++|+.++....    ...++..+.+|++|+++++++++   ++|++||
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVN   84 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP----RHPRIRREELDITDSQRLQRLFEALPRLDVLVN   84 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC----CCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh----hcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            3689999999999999999999999999999999987654211    23478999999999999888765   6899999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      |||...+..  +.+.++|  +..+++|+.++..+++++...  ....+||++||.....+.+                  
T Consensus        85 NAGi~~~~~--~~~~~~w--~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~------------------  142 (242)
T 4b79_A           85 NAGISRDRE--EYDLATF--ERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSA------------------  142 (242)
T ss_dssp             CCCCCCGGG--GGSHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCS------------------
T ss_pred             CCCCCCCcc--cCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCC------------------
Confidence            999765433  4445566  688999999999998877642  1137999999987543221                  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccccccc
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSN  240 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (348)
                             ....|+.||.....+.+.++.+   +||++..+.||.|-.|........ ..........    +| .+++  
T Consensus       143 -------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~-~~~~~~~~~~----~P-lgR~--  207 (242)
T 4b79_A          143 -------DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD-VEATRRIMQR----TP-LARW--  207 (242)
T ss_dssp             -------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCC-HHHHHHHHHT----CT-TCSC--
T ss_pred             -------CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC-HHHHHHHHhc----CC-CCCC--
Confidence                   2347999999999999998877   479999999999987743321111 1111111111    22 4454  


Q ss_pred             CCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEe
Q 035965          241 RMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICC  273 (348)
Q Consensus       241 ~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~  273 (348)
                             ...+|+|.++++++....  ..|+ +.+.
T Consensus       208 -------g~peeiA~~v~fLaSd~a~~iTG~~l~VD  236 (242)
T 4b79_A          208 -------GEAPEVASAAAFLCGPGASFVTGAVLAVD  236 (242)
T ss_dssp             -------BCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             -------cCHHHHHHHHHHHhCchhcCccCceEEEC
Confidence                   489999999999986543  3554 3443

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.87  E-value=2.6e-21  Score=167.01  Aligned_cols=222  Identities=20%  Similarity=0.154  Sum_probs=158.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|.+|||||++.||.++++.|+++|.+|++++|+.++. .....  ...++.++.+|++|++++.++++       ++
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~--~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE--IGGGAVGIQADSANLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--HCTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--cCCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            3568999999999999999999999999999999987644 22211  12467889999999998877764       58


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      |++||+||........+.+.++|  +..+++|+.++..+++++... ....++|++||.....+.+              
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w--~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~--------------  168 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQY--DDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTP--------------  168 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHH--HHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCT--------------
T ss_pred             CEEEECCCCCCCCChhhccHHHH--HHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCC--------------
Confidence            99999999876655556666667  689999999999999988754 2246899999986543222              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCc---hHHHHHhhhcCCCCccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPS---SIQVLLSPITGDSKFFS  233 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~  233 (348)
                                 ....|+.||.+...+.+.++.+.   ||++..+.||.|..+........   ....+...+.   ..+|
T Consensus       169 -----------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~---~~~P  234 (273)
T 4fgs_A          169 -----------AFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALA---AQVP  234 (273)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHH---HHST
T ss_pred             -----------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHH---hcCC
Confidence                       23479999999999999998874   69999999999977653321110   0011111111   1122


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEE
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYIC  272 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~  272 (348)
                       .++         +...+|+|.++++++....  ..|+.+.
T Consensus       235 -lgR---------~g~peeiA~~v~FLaSd~a~~iTG~~i~  265 (273)
T 4fgs_A          235 -MGR---------VGRAEEVAAAALFLASDDSSFVTGAELF  265 (273)
T ss_dssp             -TSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             -CCC---------CcCHHHHHHHHHHHhCchhcCccCCeEe
Confidence             345         4489999999999986543  3555433

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.87  E-value=1.6e-21  Score=170.83  Aligned_cols=232  Identities=15%  Similarity=0.143  Sum_probs=154.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|++|||||+|+||++++++|+++|++|++++|+..+. .....  ...++.++.+|++|.+++.++++       +
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA--HGGNAVGVVGDVRSLQDQKRAAERCLAAFGK   79 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--TBTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH--cCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            35678999999999999999999999999999999986544 22221  12478999999999988877664       6


Q ss_pred             CCEEEEccccCcccccc-----ccccccchhhhhhhhhHHHHHHHHHHHhhcC--CcceEEEeccceeeeecCCCCCCCC
Q 035965           80 CDGVFHVAASMEFDINV-----KDNIETYVQSTVINPAIQSTLNLLKACLKSE--SVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~-----~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      +|++||+||........     +...++|  ...+++|+.++..+++++...-  ...++|++||...+.+..       
T Consensus        80 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  150 (281)
T 3zv4_A           80 IDTLIPNAGIWDYSTALADLPEDKIDAAF--DDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNG-------  150 (281)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSS-------
T ss_pred             CCEEEECCCcCccccccccCChhhhHHHH--HHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCC-------
Confidence            89999999975432211     1111223  4678999999999999886531  136999999987543221       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                        ....|+.||.+.+.+.+.++.+.  .+++..++||.|..+...........   ....... 
T Consensus       151 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~-  208 (281)
T 3zv4_A          151 ------------------GGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSE---QSISSVP-  208 (281)
T ss_dssp             ------------------SCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC-----------CC-
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCccccccccccc---ccccchh-
Confidence                              33579999999999999998774  39999999999988753321000000   0000000 


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC---CCce-EEEecc
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR---AQGQ-YICCVK  275 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~-y~~~~~  275 (348)
                      ...   ........+-+..++|+|+++++++..+.   ..|. +++.+.
T Consensus       209 ~~~---~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG  254 (281)
T 3zv4_A          209 LAD---MLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGG  254 (281)
T ss_dssp             HHH---HHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSS
T ss_pred             HHH---HHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCC
Confidence            000   00000012236689999999999997332   3454 555443

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.87  E-value=1.4e-21  Score=169.57  Aligned_cols=173  Identities=19%  Similarity=0.142  Sum_probs=132.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+++|+++||||+|+||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            35578999999999999999999999999999999986543 2111 11123468899999999988877665       


Q ss_pred             CCCEEEEccccC-ccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 GCDGVFHVAASM-EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 ~~d~Vih~a~~~-~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      ++|+|||+||.. ......+.+.++|  ...+++|+.++.++++++...    + .++||++||...+.+.+        
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  152 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDF--ARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPP--------  152 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCT--------
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHH--HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCC--------
Confidence            689999999975 3222223333334  578999999999999987653    3 57999999987543221        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGP  208 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~  208 (348)
                                       ....|+.||.+.+.+.+.++.+   .++++..++||.|..+
T Consensus       153 -----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  193 (262)
T 1zem_A          153 -----------------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  193 (262)
T ss_dssp             -----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence                             2357999999999999888765   4899999999988765

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.87  E-value=4.5e-21  Score=168.92  Aligned_cols=220  Identities=17%  Similarity=0.107  Sum_probs=153.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEE-cCCCcc-cccc-cc-CCCCCeEEEEccCCCcc-------------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATV-RDPGKL-QIFS-KW-TRSDRLRLFQADLQVEG-------------   71 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~-r~~~~~-~~~~-~~-~~~~~~~~~~~Dl~d~~-------------   71 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++ |+..+. .... +. ....++.++.+|++|.+             
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            4568999999999999999999999999999999 876433 2111 10 11246889999999998             


Q ss_pred             ----hHHHhhc-------CCCEEEEccccCccccccccc--------------cccchhhhhhhhhHHHHHHHHHHHhhc
Q 035965           72 ----SFDKAVM-------GCDGVFHVAASMEFDINVKDN--------------IETYVQSTVINPAIQSTLNLLKACLKS  126 (348)
Q Consensus        72 ----~~~~~~~-------~~d~Vih~a~~~~~~~~~~~~--------------~~~~~~~~~~~~nv~~~~~ll~~~~~~  126 (348)
                          ++.++++       ++|++||+||........+.+              .++|  ...+++|+.++..+++++...
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~  164 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETAT--ADLFGSNAIAPYFLIKAFAHR  164 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHH--HHHHHHHTHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHH--HHHHHHHhHHHHHHHHHHHHH
Confidence                8877765       689999999976443322222              3334  578999999999999988642


Q ss_pred             ---CC------cceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CC
Q 035965          127 ---ES------VKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NK  194 (348)
Q Consensus       127 ---~~------~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~  194 (348)
                         ..      ..+||++||...+.+.+                         ....|+.||.+.+.+.+.++.+   .+
T Consensus       165 m~~~~~~~~~~~g~Iv~isS~~~~~~~~-------------------------~~~~Y~asKaa~~~l~~~la~e~~~~g  219 (291)
T 1e7w_A          165 VAGTPAKHRGTNYSIINMVDAMTNQPLL-------------------------GYTIYTMAKGALEGLTRSAALELAPLQ  219 (291)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             HHhcCCCCCCCCcEEEEEechhhcCCCC-------------------------CCchhHHHHHHHHHHHHHHHHHHHhcC
Confidence               11      37899999987433211                         3357999999999999998876   47


Q ss_pred             CcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc-ccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-E
Q 035965          195 IDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS-SVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-Y  270 (348)
Q Consensus       195 ~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y  270 (348)
                      +++..++||.|..+. .  .+   ......+...   .+ .+ +         +..++|+|+++++++....  ..|. +
T Consensus       220 I~vn~v~PG~v~T~~-~--~~---~~~~~~~~~~---~p-~~~r---------~~~pedvA~~v~~l~s~~~~~itG~~i  280 (291)
T 1e7w_A          220 IRVNGVGPGLSVLVD-D--MP---PAVWEGHRSK---VP-LYQR---------DSSAAEVSDVVIFLCSSKAKYITGTCV  280 (291)
T ss_dssp             EEEEEEEESSBCCGG-G--SC---HHHHHHHHTT---CT-TTTS---------CBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             eEEEEEeeCCccCCc-c--CC---HHHHHHHHhh---CC-CCCC---------CCCHHHHHHHHHHHhCCcccCccCcEE
Confidence            999999999987765 2  11   1111111111   11 11 2         5689999999999987532  3454 4


Q ss_pred             EEec
Q 035965          271 ICCV  274 (348)
Q Consensus       271 ~~~~  274 (348)
                      .+.+
T Consensus       281 ~vdG  284 (291)
T 1e7w_A          281 KVDG  284 (291)
T ss_dssp             EEST
T ss_pred             EECC
Confidence            5544

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.87  E-value=5.2e-21  Score=164.31  Aligned_cols=225  Identities=16%  Similarity=0.171  Sum_probs=158.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|++|||||++.||.++++.|+++|.+|++++|+..+. ..........++.++.+|++|.+++.++++       +
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~   83 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGR   83 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            56789999999999999999999999999999999987654 222222234578999999999988877654       6


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      +|++||+||...... .+.+.++|  ...+++|+.++..+++++...  ....+||++||.....+.+            
T Consensus        84 iDiLVNnAGi~~~~~-~~~~~e~~--~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~------------  148 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIG-LDAGRDAF--VASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQG------------  148 (258)
T ss_dssp             CCEEEECCCCCCCCC-TTSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCS------------
T ss_pred             CCEEEECCCCCCCCC-ccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCC------------
Confidence            899999999754332 24445556  578999999999998877642  1136899999987654322            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCch---HHHHHhhhcCCCCc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSS---IQVLLSPITGDSKF  231 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~  231 (348)
                                   ....|+.||.+.+.+.+.++.+   +||++..+.||.|-.|.........   -....... .   .
T Consensus       149 -------------~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~---~  211 (258)
T 4gkb_A          149 -------------NTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIA-A---K  211 (258)
T ss_dssp             -------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHH-T---T
T ss_pred             -------------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHH-h---c
Confidence                         2347999999999999999876   5899999999999876533211000   00011111 1   1


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE-EEe
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY-ICC  273 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y-~~~  273 (348)
                      +|...+         +...+|+|+++++++....  ..|+. .+.
T Consensus       212 ~plg~R---------~g~peeiA~~v~fLaS~~a~~iTG~~i~VD  247 (258)
T 4gkb_A          212 VPLGRR---------FTTPDEIADTAVFLLSPRASHTTGEWLFVD  247 (258)
T ss_dssp             CTTTTS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             CCCCCC---------CcCHHHHHHHHHHHhCchhcCccCCeEEEC
Confidence            221113         4589999999999886543  35554 443

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.87  E-value=1.7e-21  Score=168.96  Aligned_cols=216  Identities=15%  Similarity=0.051  Sum_probs=143.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc--------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM--------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~--------   78 (348)
                      +++|++|||||+|+||+++++.|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++        
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4578999999999999999999999999999999976543 1111 11112468889999999988766543        


Q ss_pred             CCCEEEEcccc--C-----ccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCC
Q 035965           79 GCDGVFHVAAS--M-----EFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSS  147 (348)
Q Consensus        79 ~~d~Vih~a~~--~-----~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~  147 (348)
                      .+|++||+||.  .     ......+.+.++|  ...+++|+.++..+++++.    +.+ .++||++||...+..  . 
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~--~-  156 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMW--DDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQY--M-  156 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHH--HHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSC--C-
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHH--HHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCC--C-
Confidence            47999999952  2     1111112223334  4788999999987777664    334 579999999864321  1 


Q ss_pred             CCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhh
Q 035965          148 GEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSP  224 (348)
Q Consensus       148 ~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  224 (348)
                                             +...|+.||.+.+.+.+.++.+   ++++++.++||.|..+................
T Consensus       157 -----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  213 (260)
T 2qq5_A          157 -----------------------FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPV  213 (260)
T ss_dssp             -----------------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--------------
T ss_pred             -----------------------CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhH
Confidence                                   3357999999999999998865   48999999999998875322100000000000


Q ss_pred             hcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          225 ITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                      ...  ...+ .++         +...+|+|+++++++..+.
T Consensus       214 ~~~--~~~~-~~~---------~~~pe~va~~v~~l~s~~~  242 (260)
T 2qq5_A          214 LKQ--FKSA-FSS---------AETTELSGKCVVALATDPN  242 (260)
T ss_dssp             -----------CH---------HHHHHHHHHHHHHHHTCTT
T ss_pred             HHH--HHhh-hcc---------CCCHHHHHHHHHHHhcCcc
Confidence            000  0000 111         3478999999999987653

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.86  E-value=1.1e-21  Score=175.43  Aligned_cols=226  Identities=18%  Similarity=0.143  Sum_probs=151.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccccc-------CCCCCeEEEEccCCCcchHHHhhcC---
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKW-------TRSDRLRLFQADLQVEGSFDKAVMG---   79 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~---   79 (348)
                      +|+||||||+|+||++++++|+++|++|+++.|+..+. ......       ....++.++.+|++|.+++.++++.   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            57899999999999999999999999999888764432 111110       1124689999999999999888764   


Q ss_pred             --CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           80 --CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        80 --~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                        +|+|||+||..........+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+.+        
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~~--------  150 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAV--ASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLP--------  150 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCT--------
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCCC--------
Confidence              899999999754332223333334  5789999999999999863    334 67999999987543211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHH-------Hh
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVL-------LS  223 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~-------~~  223 (348)
                                       ....|+.||.+.+.+.+.++.+   .++++++++|+.|..+............+       ..
T Consensus       151 -----------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  213 (327)
T 1jtv_A          151 -----------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFH  213 (327)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHH
T ss_pred             -----------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHH
Confidence                             2347999999999999998875   68999999999998775332111000000       00


Q ss_pred             hhcCCCCcc-ccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEE
Q 035965          224 PITGDSKFF-SILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYIC  272 (348)
Q Consensus       224 ~~~~~~~~~-~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~  272 (348)
                      ......... ...+        |-.+.++|+|+++++++..+.....|..
T Consensus       214 ~~~~~~~~~~~~~~--------~~~~~pedvA~~i~~l~~~~~~~~~~~t  255 (327)
T 1jtv_A          214 RFYQYLAHSKQVFR--------EAAQNPEEVAEVFLTALRAPKPTLRYFT  255 (327)
T ss_dssp             HHHHHHHHHHHHHH--------HHCBCHHHHHHHHHHHHHCSSCCSEEES
T ss_pred             HHHHHHHHHHHhhh--------hcCCCHHHHHHHHHHHHcCCCCCeEEEe
Confidence            000000000 0000        1125899999999999987655455544

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.86  E-value=1.4e-21  Score=167.18  Aligned_cols=225  Identities=16%  Similarity=0.077  Sum_probs=161.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      ..++|+++||||++.||+++++.|+++|++|++++|+..+. ... .+.....++.++.+|++|++++.++++       
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI   85 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            46789999999999999999999999999999999986543 211 122233578899999999998877664       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ++|++|||||........+.+.++|  +..+++|+.++..+++++..    .+...+||++||.....+.+         
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~--~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~---------  154 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENW--QKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARP---------  154 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCT---------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCC---------
Confidence            5899999999876666556666777  68999999999999887643    22257999999987543322         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      ....|+.||.....+.+.++.+   +||++..+.||.|..+........  ..+...+..   .
T Consensus       155 ----------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~--~~~~~~~~~---~  213 (255)
T 4g81_D          155 ----------------TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED--KQFDSWVKS---S  213 (255)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC--HHHHHHHHH---H
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC--HHHHHHHHh---C
Confidence                            2347999999999999998877   579999999999876632110000  001111111   1


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                      +| .++         +...+|+|.++++++....  ..|+ +.+.+
T Consensus       214 ~P-l~R---------~g~pediA~~v~fL~S~~a~~iTG~~i~VDG  249 (255)
T 4g81_D          214 TP-SQR---------WGRPEELIGTAIFLSSKASDYINGQIIYVDG  249 (255)
T ss_dssp             ST-TCS---------CBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CC-CCC---------CcCHHHHHHHHHHHhCchhCCCcCCEEEECC
Confidence            22 344         4478999999999886433  3554 44443

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.85  E-value=1.2e-20  Score=167.70  Aligned_cols=219  Identities=17%  Similarity=0.127  Sum_probs=148.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc-ccccC-CCCCeEEEEccCCCc-chHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QI-FSKWT-RSDRLRLFQADLQVE-GSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~-~~~~~-~~~~~~~~~~Dl~d~-~~~~~~~~------   78 (348)
                      .++++||||||+|+||++++++|+++|++|++++|+..+. .. ..+.. ...++.++.+|++|. +++..+++      
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            4568899999999999999999999999999999987543 11 11111 124789999999998 77666554      


Q ss_pred             -CCCEEEEccccCcccc------------------------------ccccccccchhhhhhhhhHHHHHHHHHHHhh--
Q 035965           79 -GCDGVFHVAASMEFDI------------------------------NVKDNIETYVQSTVINPAIQSTLNLLKACLK--  125 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~------------------------------~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~--  125 (348)
                       ++|+|||+||......                              ....+.++|  +..+++|+.|+..+++++..  
T Consensus        90 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           90 GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELA--EECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHH--HHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhh--hhheeeeeehHHHHHHHhhHhh
Confidence             7999999999764210                              001112222  46799999999999888753  


Q ss_pred             --cCCcceEEEeccceeeeecCCCCC----------C-----------------CCcccCCCCCCcchhhccCCCcchhH
Q 035965          126 --SESVKRVVLTSSVSTITAKDSSGE----------W-----------------RPVVDESCQTPIHHVWNKKASGWVYV  176 (348)
Q Consensus       126 --~~~~~~~v~~SS~~~~~~~~~~~~----------~-----------------~~~~~E~~~~~~~~~~~~~~~~~~Y~  176 (348)
                        .+ .++||++||...+.+......          +                 .....+..+         ..+...|+
T Consensus       168 ~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Y~  237 (311)
T 3o26_A          168 QLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGW---------PSFGAAYT  237 (311)
T ss_dssp             TTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTC---------CSSCHHHH
T ss_pred             ccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccC---------cccchhhH
Confidence              33 579999999876543321000          0                 000001111         11446799


Q ss_pred             hhHHHHHHHHHHHHHhC-CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHH
Q 035965          177 LSKLLSEETAFKFANEN-KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICN  255 (348)
Q Consensus       177 ~sK~~~E~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~  255 (348)
                      .||.+.+.+.+.++++. ++++..++||.|..+....                         ..       ....++.++
T Consensus       238 ~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~-------------------------~~-------~~~~~~~a~  285 (311)
T 3o26_A          238 TSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG-------------------------IG-------NYTAEEGAE  285 (311)
T ss_dssp             HHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT-------------------------CC-------SBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCC-------------------------CC-------CCCHHHHHH
Confidence            99999999999999885 6999999999987653211                         01       236788898


Q ss_pred             HHHHhhcCCCC--CceEE
Q 035965          256 AHIFLMENDRA--QGQYI  271 (348)
Q Consensus       256 ~~~~~~~~~~~--~~~y~  271 (348)
                      .++.++..+..  ++.|+
T Consensus       286 ~~~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          286 HVVRIALFPDDGPSGFFY  303 (311)
T ss_dssp             HHHHHHTCCSSCCCSCEE
T ss_pred             HHHHHHhCCCCCCCceEe
Confidence            88887765432  44554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.84  E-value=7.1e-20  Score=157.72  Aligned_cols=224  Identities=16%  Similarity=0.090  Sum_probs=153.0

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +.+++|++|||||++.||.++++.|+++|++|++++|+..+.        ..+..++.+|++|.+++.++++       +
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   78 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--------LPEELFVEADLTTKEGCAIVAEATRQRLGG   78 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--------SCTTTEEECCTTSHHHHHHHHHHHHHHTSS
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--------CCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            356789999999999999999999999999999999976432        1234478999999988877654       5


Q ss_pred             CCEEEEccccCccc--cccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           80 CDGVFHVAASMEFD--INVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        80 ~d~Vih~a~~~~~~--~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                      +|++||+||.....  ...+.+.++|  ...+++|+.++..+++++..    .+ ..++|++||.....+.+.       
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~e~~--~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~~~-------  148 (261)
T 4h15_A           79 VDVIVHMLGGSSAAGGGFSALSDDDW--YNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPLPE-------  148 (261)
T ss_dssp             CSEEEECCCCCCCCSSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT-------
T ss_pred             CCEEEECCCCCccCCCCcccCCHHHH--HHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCCCC-------
Confidence            89999999965432  2233444555  57899999999988887753    34 578999999764332211       


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCC-------chHHHHHh
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVP-------SSIQVLLS  223 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~-------~~~~~~~~  223 (348)
                                       ....|+.||.+.+.+.+.++.+   +||++..+.||.|-.+.......       ........
T Consensus       149 -----------------~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  211 (261)
T 4h15_A          149 -----------------STTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKK  211 (261)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred             -----------------ccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHH
Confidence                             2357999999999999998877   58999999999886542110000       00000000


Q ss_pred             hhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 035965          224 PITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCVK  275 (348)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~~  275 (348)
                      ........+| .++         +...+|+|+++++++....  ..|. +.+.+.
T Consensus       212 ~~~~~~~~~P-lgR---------~g~peevA~~v~fLaS~~a~~itG~~i~VDGG  256 (261)
T 4h15_A          212 IIMDGLGGIP-LGR---------PAKPEEVANLIAFLASDRAASITGAEYTIDGG  256 (261)
T ss_dssp             HHHHHTTCCT-TSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhcCCC-CCC---------CcCHHHHHHHHHHHhCchhcCccCcEEEECCc
Confidence            0000011122 344         4489999999999886433  3454 455444

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.84  E-value=1e-19  Score=169.24  Aligned_cols=222  Identities=16%  Similarity=0.109  Sum_probs=154.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------C-C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G-C   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~-~   80 (348)
                      +.++++|||||+|.||.++++.|+++|++|++++|+........... ..++.++.+|++|.+++.++++       + +
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~-~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVAD-KVGGTALTLDVTADDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHH-HHTCEEEECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHH-HcCCeEEEEecCCHHHHHHHHHHHHHHcCCCc
Confidence            35789999999999999999999999999999998653221111110 0146789999999998887764       3 9


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC---CcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE---SVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      |+|||+||........+.+.++|  ...+++|+.++.++.+++....   ...+||++||...+.+..            
T Consensus       290 d~lV~nAGv~~~~~~~~~~~~~~--~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~------------  355 (454)
T 3u0b_A          290 DILVNNAGITRDKLLANMDEKRW--DAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR------------  355 (454)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT------------
T ss_pred             eEEEECCcccCCCccccCCHHHH--HHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC------------
Confidence            99999999876554344444555  5789999999999999988651   267999999987654432            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   ....|+.+|...+.+.+.++.+   .|++++.+.||.|..+..... +.........       .. 
T Consensus       356 -------------g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~-------~~-  413 (454)
T 3u0b_A          356 -------------GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI-PLATREVGRR-------LN-  413 (454)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHHH-------SB-
T ss_pred             -------------CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc-chhhHHHHHh-------hc-
Confidence                         2357999999999888888765   589999999999987743321 0000000000       00 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCVK  275 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~~  275 (348)
                              ....+...+|+++++.+++....  ..|. +++.++
T Consensus       414 --------~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG  449 (454)
T 3u0b_A          414 --------SLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQ  449 (454)
T ss_dssp             --------TTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSS
T ss_pred             --------cccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCc
Confidence                    01114589999999999887543  3454 555443

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.84  E-value=3.3e-20  Score=174.05  Aligned_cols=225  Identities=17%  Similarity=0.128  Sum_probs=156.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCe-EEEEEcCCCcc----cc-ccccCCCCCeEEEEccCCCcchHHHhhcCC---
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYI-VHATVRDPGKL----QI-FSKWTRSDRLRLFQADLQVEGSFDKAVMGC---   80 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~-V~~~~r~~~~~----~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   80 (348)
                      .+++||||||+|+||.+++++|+++|++ |++++|+....    .. ..+.....++.++.+|++|.+++.++++.+   
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            3578999999999999999999999995 99999976421    11 111112346889999999999999888754   


Q ss_pred             ---CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           81 ---DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        81 ---d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                         |+|||+||..........+.+++  ...+++|+.|+.++++++...+ .++||++||...+.+...           
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~--~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~~g-----------  370 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERI--ERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPG-----------  370 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHH--HHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTT-----------
T ss_pred             CCCcEEEECCccCCCCccccCCHHHH--HHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCCCC-----------
Confidence               99999999765433222223333  4788999999999999998877 889999999876544322           


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                                    ...|+.+|...+.+...+.. .|+++++++|+.+.+++....   .   ..       ..+. .. 
T Consensus       371 --------------~~~Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~~gm~~~---~---~~-------~~~~-~~-  420 (486)
T 2fr1_A          371 --------------LGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEG---P---VA-------DRFR-RH-  420 (486)
T ss_dssp             --------------CTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC-------------------------CT-TT-
T ss_pred             --------------CHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCCCcccch---h---HH-------HHHH-hc-
Confidence                          23599999999988776654 699999999999987642211   0   00       0010 01 


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHH
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKL  288 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~  288 (348)
                            -..+++.+|+++++..++..+..  .+.+.  .+.+..+...+..
T Consensus       421 ------g~~~i~~e~~a~~l~~~l~~~~~--~~~v~--~~d~~~~~~~~~~  461 (486)
T 2fr1_A          421 ------GVIEMPPETACRALQNALDRAEV--CPIVI--DVRWDRFLLAYTA  461 (486)
T ss_dssp             ------TEECBCHHHHHHHHHHHHHTTCS--SCEEC--EECHHHHHHHHTS
T ss_pred             ------CCCCCCHHHHHHHHHHHHhCCCC--eEEEE--eCCHHHHhhhhcc
Confidence                  12378999999999999987542  22222  2456666554443

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.83  E-value=1.3e-21  Score=174.98  Aligned_cols=175  Identities=14%  Similarity=0.083  Sum_probs=126.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-------eEEEEEcCCC--cc--ccccccCCCCCeEEEEccCCCcchHHHhhcC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-------IVHATVRDPG--KL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVMG   79 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-------~V~~~~r~~~--~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   79 (348)
                      +|||+||||+||||++|+..|+++|+       +|+++++.+.  +.  ....+.  ...+.++ +|+.+.+++.+++++
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~--~~~~~~~-~di~~~~~~~~a~~~   80 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELE--DCAFPLL-AGLEATDDPKVAFKD   80 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH--TTTCTTE-EEEEEESCHHHHTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhh--ccccccc-CCeEeccChHHHhCC
Confidence            46899999999999999999999986       8999988642  11  111111  0112333 677777778888999


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      +|+|||+||......  ..     + ..+++.|+.++.++++++++.+ ...+++++|+.....         .++.++.
T Consensus        81 ~D~Vih~Ag~~~~~~--~~-----~-~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~---------~~~~~~~  143 (327)
T 1y7t_A           81 ADYALLVGAAPRKAG--ME-----R-RDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN---------ALIAYKN  143 (327)
T ss_dssp             CSEEEECCCCCCCTT--CC-----H-HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH---------HHHHHHT
T ss_pred             CCEEEECCCcCCCCC--CC-----H-HHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh---------HHHHHHH
Confidence            999999999764332  22     3 4789999999999999999874 345788877643100         1222111


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCC
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTS  212 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~  212 (348)
                      ...       .+|.+.|+.+|+.+|++...+++..+++.+++|+++||||+...
T Consensus       144 ~~~-------~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~~  190 (327)
T 1y7t_A          144 APG-------LNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSST  190 (327)
T ss_dssp             CTT-------SCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSSTT
T ss_pred             cCC-------CChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCCe
Confidence            100       01556799999999999999999889999999999999997643

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.83  E-value=6.1e-20  Score=159.86  Aligned_cols=170  Identities=18%  Similarity=0.075  Sum_probs=130.0

Q ss_pred             CCCCeEEEeCC--CChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGA--NGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGa--tGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +++|+++||||  +|+||++++++|+++|++|++++|+..+.  .....  ...++.++.+|++|.+++.++++      
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR--LPAKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT--SSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh--cCCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            45689999999  99999999999999999999999976432  11111  12367889999999998887765      


Q ss_pred             ----CCCEEEEccccCcc-----ccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCC
Q 035965           79 ----GCDGVFHVAASMEF-----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSG  148 (348)
Q Consensus        79 ----~~d~Vih~a~~~~~-----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~  148 (348)
                          ++|+|||+||....     ....+.+.++|  ...+++|+.++..+++++...- ..++||++||... .  ..  
T Consensus        83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~--~~--  155 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADV--SKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-R--AM--  155 (269)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-S--CC--
T ss_pred             CCCCCceEEEECCccCccccccccccccCCHHHH--HHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-c--cc--
Confidence                78999999997542     22223333444  4789999999999999997641 1368999998653 1  11  


Q ss_pred             CCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccC
Q 035965          149 EWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGP  208 (348)
Q Consensus       149 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~  208 (348)
                                           +....|+.||.+.+.+.+.++.+   .++++..++||.|..+
T Consensus       156 ---------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  197 (269)
T 2h7i_A          156 ---------------------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL  197 (269)
T ss_dssp             ---------------------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred             ---------------------CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence                                 13357999999999999998876   4899999999988665

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.83  E-value=4.3e-20  Score=164.43  Aligned_cols=211  Identities=16%  Similarity=0.129  Sum_probs=144.5

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcC---------CCcc-ccc-cccCCCCCeEEEEccCCCcchHHH
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRD---------PGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDK   75 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~---------~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~   75 (348)
                      +.+++|+++||||+|+||+++++.|+++|++|+++++.         ..+. ... .+...  . ....+|+.|.+++.+
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~--~-~~~~~D~~~~~~~~~   81 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR--G-GKAVANYDSVEAGEK   81 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT--T-CEEEEECCCGGGHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh--C-CeEEEeCCCHHHHHH
Confidence            45677899999999999999999999999999998663         2211 111 01001  1 123589999887665


Q ss_pred             hhc-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeec
Q 035965           76 AVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAK  144 (348)
Q Consensus        76 ~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~  144 (348)
                      +++       ++|+|||+||..........+.++|  +..+++|+.|+.++++++..    .+ .++||++||....++.
T Consensus        82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~  158 (319)
T 1gz6_A           82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDW--DIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGN  158 (319)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCC
Confidence            543       6899999999765432222333334  57899999999999988743    34 5799999997654432


Q ss_pred             CCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHH
Q 035965          145 DSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVL  221 (348)
Q Consensus       145 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~  221 (348)
                      .                         +...|+.||.+.+.+.+.++.+   .++++..++|+.+ .+..    ...    
T Consensus       159 ~-------------------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~----~~~----  204 (319)
T 1gz6_A          159 F-------------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT----ETV----  204 (319)
T ss_dssp             T-------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT----GGG----
T ss_pred             C-------------------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc----ccc----
Confidence            1                         2357999999999999998877   4899999999976 3210    000    


Q ss_pred             HhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC-Cc-eEEEecc
Q 035965          222 LSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA-QG-QYICCVK  275 (348)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~-~~-~y~~~~~  275 (348)
                                .+ .       ..+.++.++|+|.++++++..+.. .| .|++.+.
T Consensus       205 ----------~~-~-------~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          205 ----------MP-E-------DLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             ----------SC-H-------HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             ----------CC-h-------hhhccCCHHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence                      00 0       012256899999999999876432 34 4555443

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.82  E-value=8.7e-20  Score=156.57  Aligned_cols=217  Identities=13%  Similarity=0.044  Sum_probs=140.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEE-E--cCCCcc-ccccccCCCCCeEEEEccCCCcchHHH-hh---cCCCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHAT-V--RDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDK-AV---MGCDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~-~--r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~---~~~d~   82 (348)
                      +|+++||||+|+||++++++|+++|++|+++ +  |+..+. ......   .+.++.  |..+.+.+.+ +.   .++|+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~---~~~~~~--~~~~v~~~~~~~~~~~g~iD~   75 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN---PGTIAL--AEQKPERLVDATLQHGEAIDT   75 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS---TTEEEC--CCCCGGGHHHHHGGGSSCEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh---CCCccc--CHHHHHHHHHHHHHHcCCCCE
Confidence            4789999999999999999999999999999 6  876543 221111   122222  4444433322 22   26899


Q ss_pred             EEEccccCcc---ccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           83 VFHVAASMEF---DINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        83 Vih~a~~~~~---~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      |||+||....   ....+.+.++|  ...+++|+.++.++++++.    +.+ .++||++||...+.+.+          
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~----------  142 (244)
T 1zmo_A           76 IVSNDYIPRPMNRLPLEGTSEADI--RQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPLA----------  142 (244)
T ss_dssp             EEECCCCCTTGGGCCSTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT----------
T ss_pred             EEECCCcCCCCCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCCC----------
Confidence            9999997654   33223333444  5789999999999999875    334 57999999987543221          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchH--HHHHhhhcCCCC
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSI--QVLLSPITGDSK  230 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~--~~~~~~~~~~~~  230 (348)
                                     ....|+.||.+.+.+.+.++.+   .++++..++|+.|..+..... ....  .........   
T Consensus       143 ---------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~---  203 (244)
T 1zmo_A          143 ---------------YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPT-SDWENNPELRERVDR---  203 (244)
T ss_dssp             ---------------TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCH-HHHHHCHHHHHHHHH---
T ss_pred             ---------------CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc-ccccchHHHHHHHhc---
Confidence                           2346999999999999998876   479999999999877642000 0000  000000000   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                      ..+ .++         +...+|+|+++++++....  ..|. +.+.+
T Consensus       204 ~~p-~~r---------~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdg  240 (244)
T 1zmo_A          204 DVP-LGR---------LGRPDEMGALITFLASRRAAPIVGQFFAFTG  240 (244)
T ss_dssp             HCT-TCS---------CBCHHHHHHHHHHHHTTTTGGGTTCEEEEST
T ss_pred             CCC-CCC---------CcCHHHHHHHHHHHcCccccCccCCEEEeCC
Confidence            011 111         6689999999999987643  2454 44443

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.82  E-value=7.8e-19  Score=151.51  Aligned_cols=222  Identities=16%  Similarity=0.113  Sum_probs=153.7

Q ss_pred             CCCCCeEEEeCCCC--hhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC--CCCCeEEEEccCCCcchHHHhhc----
Q 035965            8 TGRSKTFCVTGANG--YIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT--RSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatG--fiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      .+++|+++||||+|  .||.++++.|+++|++|++++|+.... .......  ...++.++.+|++|.+++.++++    
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            45689999999887  899999999999999999999986543 2222111  23468899999999988877654    


Q ss_pred             ---CCCEEEEccccCccccc----cccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCC
Q 035965           79 ---GCDGVFHVAASMEFDIN----VKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~~~~----~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                         ++|++||+|+.......    .+...++|  ...+++|+.++..+.+.+... ....+||++||.....+.+     
T Consensus        83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~--~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~-----  155 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGF--LLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQ-----  155 (256)
T ss_dssp             HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCT-----
T ss_pred             HhCCCCEEEeccccccccccccccccCCHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcc-----
Confidence               68999999997543221    12222333  356788999998888877653 2246899999986533221     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          ....|+.||.+.+.+.+.++.+   +||++..+.||.|-.+....... . ......+..
T Consensus       156 --------------------~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~-~-~~~~~~~~~  213 (256)
T 4fs3_A          156 --------------------NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGG-F-NTILKEIKE  213 (256)
T ss_dssp             --------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-H-HHHHHHHHH
T ss_pred             --------------------cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccC-C-HHHHHHHHh
Confidence                                2357999999999999998877   57999999999987764332111 1 111111111


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                         ..| .++         +...+|+|+++++++....  ..|..+
T Consensus       214 ---~~P-l~R---------~g~peevA~~v~fL~Sd~a~~iTG~~i  246 (256)
T 4fs3_A          214 ---RAP-LKR---------NVDQVEVGKTAAYLLSDLSSGVTGENI  246 (256)
T ss_dssp             ---HST-TSS---------CCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             ---cCC-CCC---------CcCHHHHHHHHHHHhCchhcCccCCEE
Confidence               122 344         4489999999999986533  355543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.82  E-value=2.4e-19  Score=168.91  Aligned_cols=226  Identities=15%  Similarity=0.105  Sum_probs=159.7

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc----cc-ccccCCCCCeEEEEccCCCcchHHHhhcC--CC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL----QI-FSKWTRSDRLRLFQADLQVEGSFDKAVMG--CD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~----~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d   81 (348)
                      .+++||||||+|+||.+++++|+++|+ +|++++|+..+.    .. ..+.....++.++.+|++|.+++.++++.  +|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            357999999999999999999999999 689999976421    11 11112234688999999999999998865  99


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      +|||+||..........+.+++  ...+++|+.++.++.+++... + .++||++||...+.+..               
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~--~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~g~~---------------  399 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESF--ETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTWGNA---------------  399 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHH--HHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTTCCT---------------
T ss_pred             EEEECCcccCCcccccCCHHHH--HHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcCCCC---------------
Confidence            9999999865543223333333  467899999999999998876 5 78999999986554332               


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccccccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSN  240 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (348)
                                ....|+.+|...|.+.+.+. ..|+++++++|+.+-+.+....   ...   ..+.        ..... 
T Consensus       400 ----------g~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~~---~~~---~~~~--------~~g~~-  453 (511)
T 2z5l_A          400 ----------GQGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAAG---AGE---ESLS--------RRGLR-  453 (511)
T ss_dssp             ----------TBHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCCC---HHH---HHHH--------HHTBC-
T ss_pred             ----------CCHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCccccc---ccH---HHHH--------hcCCC-
Confidence                      23479999999999988764 4699999999998843322211   110   0000        01112 


Q ss_pred             CCCCcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHh
Q 035965          241 RMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLE  289 (348)
Q Consensus       241 ~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~  289 (348)
                            .++.+|+++++..++.++..  .+.+.  .+.+..+...+...
T Consensus       454 ------~l~~e~~a~~l~~al~~~~~--~v~v~--~~d~~~~~~~~~~~  492 (511)
T 2z5l_A          454 ------AMDPDAAVDALLGAMGRNDV--CVTVV--DVDWERFAPATNAI  492 (511)
T ss_dssp             ------CBCHHHHHHHHHHHHHHTCS--EEEEC--CBCHHHHHHHHHHH
T ss_pred             ------CCCHHHHHHHHHHHHhCCCC--EEEEE--eCCHHHHHhhhccc
Confidence                  78999999999999986532  23332  34566666655544

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.82  E-value=8.6e-19  Score=154.83  Aligned_cols=227  Identities=15%  Similarity=0.105  Sum_probs=144.6

Q ss_pred             CCCCCeEEEeCCC--ChhHHHHHHHHHHCCCeEEEEEcCC-----------Ccc-ccccccCCC--CCeEEEEcc-----
Q 035965            8 TGRSKTFCVTGAN--GYIGSWLVKTLLERGYIVHATVRDP-----------GKL-QIFSKWTRS--DRLRLFQAD-----   66 (348)
Q Consensus         8 ~~~~~~ilVtGat--GfiG~~l~~~L~~~g~~V~~~~r~~-----------~~~-~~~~~~~~~--~~~~~~~~D-----   66 (348)
                      .+++|+++||||+  |+||++++++|+++|++|++++|++           .+. ....+....  .....+.+|     
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence            4567899999999  9999999999999999999998642           111 111111000  012333333     


Q ss_pred             ---CC----C--------cchHHHhhc-------CCCEEEEccccCc--cccccccccccchhhhhhhhhHHHHHHHHHH
Q 035965           67 ---LQ----V--------EGSFDKAVM-------GCDGVFHVAASME--FDINVKDNIETYVQSTVINPAIQSTLNLLKA  122 (348)
Q Consensus        67 ---l~----d--------~~~~~~~~~-------~~d~Vih~a~~~~--~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~  122 (348)
                         +.    |        .+++.++++       ++|++||+||...  .....+.+.++|  ...+++|+.++.+++++
T Consensus        85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGY--LAAISASSYSFVSLLSH  162 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHH--HHHHHHHTHHHHHHHHH
T ss_pred             hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHH--HHHHHHhhhHHHHHHHH
Confidence               22    2        445554443       6899999998642  122123333444  57899999999999999


Q ss_pred             Hhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh----CCCcE
Q 035965          123 CLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE----NKIDL  197 (348)
Q Consensus       123 ~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~  197 (348)
                      +... ...++||++||...+.+.+.                        ....|+.||.+.+.+.+.++.+    +++++
T Consensus       163 ~~~~m~~~g~iv~isS~~~~~~~~~------------------------~~~~Y~asKaa~~~~~~~la~e~~~~~gi~v  218 (297)
T 1d7o_A          163 FLPIMNPGGASISLTYIASERIIPG------------------------YGGGMSSAKAALESDTRVLAFEAGRKQNIRV  218 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCCTT------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred             HHHHhccCceEEEEeccccccCCCC------------------------cchHHHHHHHHHHHHHHHHHHHhCcccCcEE
Confidence            9764 11368999999865432211                        1136999999999999988765    58999


Q ss_pred             EEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 035965          198 VSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQG-QYICCV  274 (348)
Q Consensus       198 ~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~-~y~~~~  274 (348)
                      ..++||.|.++..... . ....+.......   .+ .++         +..++|+|+++++++....  ..| .+++.+
T Consensus       219 n~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~---~p-~~r---------~~~pedvA~~v~~l~s~~~~~itG~~i~vdg  283 (297)
T 1d7o_A          219 NTISAGPLGSRAAKAI-G-FIDTMIEYSYNN---AP-IQK---------TLTADEVGNAAAFLVSPLASAITGATIYVDN  283 (297)
T ss_dssp             EEEEECCCBCCCSSCC-S-HHHHHHHHHHHH---SS-SCC---------CBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             EEEeccccccchhhhc-c-ccHHHHHHhhcc---CC-CCC---------CCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            9999999999864431 1 111111111100   11 112         5689999999999987532  245 455554


Q ss_pred             c
Q 035965          275 K  275 (348)
Q Consensus       275 ~  275 (348)
                      .
T Consensus       284 G  284 (297)
T 1d7o_A          284 G  284 (297)
T ss_dssp             T
T ss_pred             C
Confidence            4

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.81  E-value=9.1e-20  Score=157.91  Aligned_cols=217  Identities=18%  Similarity=0.153  Sum_probs=147.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHH---CCCeEEEEEcCCCcc-cccc-ccC--CCCCeEEEEccCCCcchHHHhhc--
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLE---RGYIVHATVRDPGKL-QIFS-KWT--RSDRLRLFQADLQVEGSFDKAVM--   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~---~g~~V~~~~r~~~~~-~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~--   78 (348)
                      .+++|+++||||+|+||++++++|++   +|++|++++|+..+. .... +..  ...++.++.+|++|.+++.++++  
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            35678999999999999999999999   899999999986543 2111 100  12468899999999988876653  


Q ss_pred             -------CCC--EEEEccccCcc--ccccc-cccccchhhhhhhhhHHHHHHHHHHHhhcC-----CcceEEEeccceee
Q 035965           79 -------GCD--GVFHVAASMEF--DINVK-DNIETYVQSTVINPAIQSTLNLLKACLKSE-----SVKRVVLTSSVSTI  141 (348)
Q Consensus        79 -------~~d--~Vih~a~~~~~--~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-----~~~~~v~~SS~~~~  141 (348)
                             .+|  +|||+||....  ....+ .+.++|  ...+++|+.++.++++++...-     ..++||++||...+
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEV--NNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHH--HHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence                   368  99999997533  11112 233444  5789999999999999986431     24689999998754


Q ss_pred             eecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC-CCcEEEEecCccccCCCCCCCCchHHH
Q 035965          142 TAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN-KIDLVSVITTTVAGPFLTSSVPSSIQV  220 (348)
Q Consensus       142 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~~~~~~  220 (348)
                      .+.+                         +...|+.||.+.+.+.+.++.+. ++++..++||.+-.+..        ..
T Consensus       161 ~~~~-------------------------~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~--------~~  207 (259)
T 1oaa_A          161 QPYK-------------------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQ--------QL  207 (259)
T ss_dssp             SCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHH--------HH
T ss_pred             CCCC-------------------------CccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchH--------HH
Confidence            3211                         34579999999999999998885 48999999998754421        00


Q ss_pred             HHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcC
Q 035965          221 LLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEN  263 (348)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~  263 (348)
                      +.... .............   ..+.+..++|+|+++++++..
T Consensus       208 ~~~~~-~~~~~~~~~~~~~---p~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          208 ARETS-KDPELRSKLQKLK---SDGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             HHHHC-SCHHHHHHHHHHH---HTTCSBCHHHHHHHHHHHHHH
T ss_pred             Hhhcc-CChhHHHHHHHhh---hcCCcCCHHHHHHHHHHHHhh
Confidence            10000 0000000000000   012267999999999998874

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.78  E-value=6e-18  Score=150.92  Aligned_cols=231  Identities=14%  Similarity=0.069  Sum_probs=126.0

Q ss_pred             CCCCCeEEEeCC--CChhHHHHHHHHHHCCCeEEEEEcCC-----------Ccc-ccccc--------cC----CC---C
Q 035965            8 TGRSKTFCVTGA--NGYIGSWLVKTLLERGYIVHATVRDP-----------GKL-QIFSK--------WT----RS---D   58 (348)
Q Consensus         8 ~~~~~~ilVtGa--tGfiG~~l~~~L~~~g~~V~~~~r~~-----------~~~-~~~~~--------~~----~~---~   58 (348)
                      .+++|++|||||  +|+||+++++.|+++|++|++++|++           .+. ....+        ..    ..   .
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            355789999999  89999999999999999999998642           110 00000        00    00   0


Q ss_pred             CeEEEEccC------------CC--------cchHHHhhc-------CCCEEEEccccCc--cccccccccccchhhhhh
Q 035965           59 RLRLFQADL------------QV--------EGSFDKAVM-------GCDGVFHVAASME--FDINVKDNIETYVQSTVI  109 (348)
Q Consensus        59 ~~~~~~~Dl------------~d--------~~~~~~~~~-------~~d~Vih~a~~~~--~~~~~~~~~~~~~~~~~~  109 (348)
                      ...++.+|+            +|        .+++.++++       ++|++||+||...  .....+.+.++|  ...+
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~--~~~~  163 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGY--LAAV  163 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHH--HHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHH--HHHH
Confidence            124444442            22        334544443       6899999999642  222223333444  5789


Q ss_pred             hhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHH
Q 035965          110 NPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFK  188 (348)
Q Consensus       110 ~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  188 (348)
                      ++|+.++..+++++... ....+||++||...+.+.+.                        ....|+.||.+.+.+.+.
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~------------------------~~~~Y~asKaal~~l~~~  219 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPG------------------------YGGGMSSAKAALESDCRT  219 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------------------------------THHHHHH
T ss_pred             hHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCc------------------------cchhhHHHHHHHHHHHHH
Confidence            99999999999998764 11268999999875432211                        113699999999999998


Q ss_pred             HHHh----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC-CCccccccccccCCCCcceeeHHHHHHHHHHhhcC
Q 035965          189 FANE----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD-SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEN  263 (348)
Q Consensus       189 ~~~~----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~  263 (348)
                      ++.+    +++++..++||.|..+............+....... ....+ .++         +..++|+|+++++++..
T Consensus       220 la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~r---------~~~peevA~~v~~L~s~  289 (319)
T 2ptg_A          220 LAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAP-LQK---------ELESDDVGRAALFLLSP  289 (319)
T ss_dssp             HHHHHHHHHCCEEEEEEECCCC-----------------------------------------CCCHHHHHHHHHHHTSG
T ss_pred             HHHHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCC-CCC---------CCCHHHHHHHHHHHhCc
Confidence            8765    489999999999987642210000000000000000 00011 122         56899999999999875


Q ss_pred             CC--CCceE-EEec
Q 035965          264 DR--AQGQY-ICCV  274 (348)
Q Consensus       264 ~~--~~~~y-~~~~  274 (348)
                      ..  ..|.+ .+.+
T Consensus       290 ~~~~itG~~i~vdG  303 (319)
T 2ptg_A          290 LARAVTGATLYVDN  303 (319)
T ss_dssp             GGTTCCSCEEEEST
T ss_pred             ccCCccCCEEEECC
Confidence            32  35554 4433

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.77  E-value=2.7e-18  Score=160.60  Aligned_cols=207  Identities=16%  Similarity=0.102  Sum_probs=150.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc----ccc-cccCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL----QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~----~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      +++++|||||+|+||.+++++|+++|+ +|++++|+....    .+. .+.....++.++.+|++|.+++.++++     
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            348999999999999999999999998 788888864322    111 111223578999999999999988875     


Q ss_pred             -CCCEEEEccccC-ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           79 -GCDGVFHVAASM-EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        79 -~~d~Vih~a~~~-~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                       .+|+|||+||.. ........+.++|  ...+++|+.++.++.+++...+ ..+||++||...+.+...          
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~--~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g~~g----------  384 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQL--DALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWGSGG----------  384 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHH--HHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTTCTT----------
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHH--HHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCCCCC----------
Confidence             379999999986 3333333333444  5789999999999999998887 789999999876544322          


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                     ...|+.+|...+.+.+.+. ..|++++.+.||.+.+++...... ....+           . ..
T Consensus       385 ---------------~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~~-~~~~l-----------~-~~  435 (496)
T 3mje_A          385 ---------------QPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDPE-VHDRL-----------V-RQ  435 (496)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC-------CHHH-----------H-HT
T ss_pred             ---------------cHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccChH-HHHHH-----------H-hc
Confidence                           3469999999998888765 469999999999988765432100 00000           0 00


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                      ...       .+..++.++++..++..+.
T Consensus       436 g~~-------~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          436 GVL-------AMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             TEE-------EECHHHHHHHHHHHHHHTC
T ss_pred             CCC-------CCCHHHHHHHHHHHHcCCC
Confidence            111       5788999999999998653

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.76  E-value=1.7e-17  Score=147.69  Aligned_cols=226  Identities=16%  Similarity=0.081  Sum_probs=140.6

Q ss_pred             CCCCCeEEEeCC--CChhHHHHHHHHHHCCCeEEEEEcCC-----------Ccc-ccccccCC--CCCeEEEEccC----
Q 035965            8 TGRSKTFCVTGA--NGYIGSWLVKTLLERGYIVHATVRDP-----------GKL-QIFSKWTR--SDRLRLFQADL----   67 (348)
Q Consensus         8 ~~~~~~ilVtGa--tGfiG~~l~~~L~~~g~~V~~~~r~~-----------~~~-~~~~~~~~--~~~~~~~~~Dl----   67 (348)
                      .+++|+++||||  +|+||.++++.|+++|++|++++|++           .+. ....+...  ...+.++.+|+    
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            356789999999  89999999999999999999998642           111 11111000  00124444443    


Q ss_pred             --------CC--------cchHHHhhc-------CCCEEEEccccCc--cccccccccccchhhhhhhhhHHHHHHHHHH
Q 035965           68 --------QV--------EGSFDKAVM-------GCDGVFHVAASME--FDINVKDNIETYVQSTVINPAIQSTLNLLKA  122 (348)
Q Consensus        68 --------~d--------~~~~~~~~~-------~~d~Vih~a~~~~--~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~  122 (348)
                              +|        .+++.++++       ++|++||+||...  .....+.+.++|  ...+++|+.++..++++
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~--~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGY--LAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHH--HHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHH--HHHHhhhhHHHHHHHHH
Confidence                    32        445554443       6899999999653  122223333444  57899999999999999


Q ss_pred             Hhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh----CCCcE
Q 035965          123 CLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE----NKIDL  197 (348)
Q Consensus       123 ~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~  197 (348)
                      +... ...++||++||...+.+.+.                        ....|+.||.+.+.+.+.++.+    +|+++
T Consensus       164 ~~~~m~~~g~Iv~isS~~~~~~~~~------------------------~~~~Y~asKaal~~l~~~la~el~~~~gIrv  219 (315)
T 2o2s_A          164 FGPIMNEGGSAVTLSYLAAERVVPG------------------------YGGGMSSAKAALESDTRTLAWEAGQKYGVRV  219 (315)
T ss_dssp             HSTTEEEEEEEEEEEEGGGTSCCTT------------------------CCTTHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             HHHHHhcCCEEEEEecccccccCCC------------------------ccHHHHHHHHHHHHHHHHHHHHhCcccCeEE
Confidence            8754 11268999999865432211                        1135999999999999988765    58999


Q ss_pred             EEEecCccccCCCCCC----CCchHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          198 VSVITTTVAGPFLTSS----VPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       198 ~~lR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                      ..++||.|..+.....    .......+......   ..+ .++         +...+|+|+++++++....  ..|.++
T Consensus       220 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---~~p-~~r---------~~~pedvA~~v~~L~s~~~~~itG~~i  286 (315)
T 2o2s_A          220 NAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYN---NAP-LRR---------DLHSDDVGGAALFLLSPLARAVSGVTL  286 (315)
T ss_dssp             EEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHH---HSS-SCC---------CCCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             EEEecccccchhhhhccccccchhHHHHHHHHhc---cCC-CCC---------CCCHHHHHHHHHHHhCchhccCcCCEE
Confidence            9999999866421000    00000000000000   011 122         5689999999999987532  355554


Q ss_pred             E
Q 035965          272 C  272 (348)
Q Consensus       272 ~  272 (348)
                      .
T Consensus       287 ~  287 (315)
T 2o2s_A          287 Y  287 (315)
T ss_dssp             E
T ss_pred             E
Confidence            3

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.73  E-value=2.1e-17  Score=159.50  Aligned_cols=200  Identities=18%  Similarity=0.079  Sum_probs=136.2

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc---------CCCcc-cccc-ccCCCCCeEEEEccCCCcchHHH
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVR---------DPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDK   75 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r---------~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~   75 (348)
                      ..+++|+++||||+|+||+++++.|+++|++|++++|         +.... .... +...  .. ...+|+.|.+++.+
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~--~~-~~~~D~~d~~~~~~   91 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA--GG-EAVADYNSVIDGAK   91 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT--TC-CEEECCCCGGGHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh--CC-eEEEEeCCHHHHHH
Confidence            3456789999999999999999999999999999987         22222 1111 1111  11 23479999988877


Q ss_pred             hhc-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeec
Q 035965           76 AVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAK  144 (348)
Q Consensus        76 ~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~  144 (348)
                      +++       .+|++|||||........+.+.++|  ...+++|+.|+.++++++.    +.+ ..+||++||.+.+.+.
T Consensus        92 ~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~--~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~~  168 (613)
T 3oml_A           92 VIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDW--NLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGN  168 (613)
T ss_dssp             HHC----------CEECCCCCCCCCCSTTCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCC
Confidence            765       5899999999875544334444555  5789999999999999883    444 5799999998765433


Q ss_pred             CCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHH
Q 035965          145 DSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVL  221 (348)
Q Consensus       145 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~  221 (348)
                      .                         ....|+.||.+.+.+.+.++.+   .+|++..+.|+.+- +...          
T Consensus       169 ~-------------------------~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~~~~----------  212 (613)
T 3oml_A          169 F-------------------------GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-RMTE----------  212 (613)
T ss_dssp             T-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------C----------
T ss_pred             C-------------------------CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-hhhh----------
Confidence            2                         2346999999999999998877   37999999998531 1100          


Q ss_pred             HhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          222 LSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                           +.   .+ .       ..+..+..+|+|.++++++...
T Consensus       213 -----~~---~~-~-------~~~~~~~pedvA~~v~~L~s~~  239 (613)
T 3oml_A          213 -----GI---LP-D-------ILFNELKPKLIAPVVAYLCHES  239 (613)
T ss_dssp             -----CC---CC-H-------HHHTTCCGGGTHHHHHHTTSTT
T ss_pred             -----hc---cc-h-------hhhhcCCHHHHHHHHHHhcCCC
Confidence                 00   00 0       0112457899999999988764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.73  E-value=1.1e-16  Score=143.15  Aligned_cols=171  Identities=11%  Similarity=0.077  Sum_probs=122.4

Q ss_pred             CCeEEEeCCCC--hhHHHHHHHHHHCCCeEEEEEcCC---------Ccc----ccccc-cCCCCCeEEEEccCCCc--c-
Q 035965           11 SKTFCVTGANG--YIGSWLVKTLLERGYIVHATVRDP---------GKL----QIFSK-WTRSDRLRLFQADLQVE--G-   71 (348)
Q Consensus        11 ~~~ilVtGatG--fiG~~l~~~L~~~g~~V~~~~r~~---------~~~----~~~~~-~~~~~~~~~~~~Dl~d~--~-   71 (348)
                      +|+++||||++  .||.+++++|+++|++|++.+|++         .+.    ..... ......+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            57899999875  999999999999999999877553         111    11111 11223467888998877  6 


Q ss_pred             -----------------hHHHhhc-------CCCEEEEccccCc--cccccccccccchhhhhhhhhHHHHHHHHHHHhh
Q 035965           72 -----------------SFDKAVM-------GCDGVFHVAASME--FDINVKDNIETYVQSTVINPAIQSTLNLLKACLK  125 (348)
Q Consensus        72 -----------------~~~~~~~-------~~d~Vih~a~~~~--~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~  125 (348)
                                       ++.++++       .+|++||+||...  .....+.+.++|  ...+++|+.++..+++++..
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~p  159 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGY--LDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHH--HHHHHHHhHHHHHHHHHHHH
Confidence                             6655543       5899999999642  222223344444  57899999999999999875


Q ss_pred             c-CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcc-hhHhhHHHHHHHHHHHHHh----CCCcEEE
Q 035965          126 S-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGW-VYVLSKLLSEETAFKFANE----NKIDLVS  199 (348)
Q Consensus       126 ~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~----~~~~~~~  199 (348)
                      . ....+||++||.....+.+                         ... .|+.||.+.+.+.+.++.+    +++++..
T Consensus       160 ~m~~~g~Iv~isS~~~~~~~~-------------------------~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~  214 (329)
T 3lt0_A          160 IMKPQSSIISLTYHASQKVVP-------------------------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINT  214 (329)
T ss_dssp             GEEEEEEEEEEECGGGTSCCT-------------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred             HHhhCCeEEEEeCccccCCCC-------------------------cchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEE
Confidence            4 1126899999986443221                         122 6999999999998888765    4899999


Q ss_pred             EecCccccC
Q 035965          200 VITTTVAGP  208 (348)
Q Consensus       200 lR~~~v~G~  208 (348)
                      +.||.|..+
T Consensus       215 v~PG~v~T~  223 (329)
T 3lt0_A          215 ISAGPLKSR  223 (329)
T ss_dssp             EEECCCCCH
T ss_pred             Eecceeech
Confidence            999998765

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.71  E-value=3.1e-17  Score=155.11  Aligned_cols=226  Identities=13%  Similarity=0.089  Sum_probs=152.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCe-EEEE-EcCCCc-------------c-cc-ccccCCCCCeEEEEccCCCcch
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYI-VHAT-VRDPGK-------------L-QI-FSKWTRSDRLRLFQADLQVEGS   72 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~-V~~~-~r~~~~-------------~-~~-~~~~~~~~~~~~~~~Dl~d~~~   72 (348)
                      ..+++|||||+|.||.+++++|+++|++ |+++ +|+...             . .. ..+.....++.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            4679999999999999999999999997 5565 776422             1 11 1111123468999999999999


Q ss_pred             HHHhhcC------CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCC----cceEEEeccceeee
Q 035965           73 FDKAVMG------CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES----VKRVVLTSSVSTIT  142 (348)
Q Consensus        73 ~~~~~~~------~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~----~~~~v~~SS~~~~~  142 (348)
                      +.++++.      +|+|||+||..........+.++|  ...+++|+.|+.+|.+++.....    ..+||++||...+.
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~--~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~  407 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADAL--ARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW  407 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHH--HHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHH--HHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence            9888763      699999999876544334444444  57899999999999999886531    57899999987654


Q ss_pred             ecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHH
Q 035965          143 AKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLL  222 (348)
Q Consensus       143 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~  222 (348)
                      +...                         ...|+.+|...+.+...+.. .|++++.+.||.+ +.+...  .....   
T Consensus       408 g~~g-------------------------~~~YaaaKa~l~~lA~~~~~-~gi~v~sI~pG~~-~tgm~~--~~~~~---  455 (525)
T 3qp9_A          408 GGAG-------------------------QGAYAAGTAFLDALAGQHRA-DGPTVTSVAWSPW-EGSRVT--EGATG---  455 (525)
T ss_dssp             CCTT-------------------------CHHHHHHHHHHHHHHTSCCS-SCCEEEEEEECCB-TTSGGG--SSHHH---
T ss_pred             CCCC-------------------------CHHHHHHHHHHHHHHHHHHh-CCCCEEEEECCcc-cccccc--chhhH---
Confidence            4322                         34699999999887665433 5899999999998 222110  00000   


Q ss_pred             hhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHH
Q 035965          223 SPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKL  288 (348)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~  288 (348)
                      ..+..       . ...       .+..+++++++..++..+..  ...+  ..+.+..+...+..
T Consensus       456 ~~~~~-------~-g~~-------~l~pee~a~~l~~~l~~~~~--~v~v--~~~dw~~~~~~~~~  502 (525)
T 3qp9_A          456 ERLRR-------L-GLR-------PLAPATALTALDTALGHGDT--AVTI--ADVDWSSFAPGFTT  502 (525)
T ss_dssp             HHHHH-------T-TBC-------CBCHHHHHHHHHHHHHHTCS--EEEE--CCBCHHHHHHHHHS
T ss_pred             HHHHh-------c-CCC-------CCCHHHHHHHHHHHHhCCCC--eEEE--EeCCHHHHHhhccc
Confidence            00000       0 011       57899999999999987532  2222  23345555554443

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.63  E-value=6.4e-15  Score=153.25  Aligned_cols=209  Identities=16%  Similarity=0.100  Sum_probs=141.9

Q ss_pred             CCCCCeEEEeCCCCh-hHHHHHHHHHHCCCeEEEEE-cCCCcc-ccc-cc----cCCCCCeEEEEccCCCcchHHHhhc-
Q 035965            8 TGRSKTFCVTGANGY-IGSWLVKTLLERGYIVHATV-RDPGKL-QIF-SK----WTRSDRLRLFQADLQVEGSFDKAVM-   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGf-iG~~l~~~L~~~g~~V~~~~-r~~~~~-~~~-~~----~~~~~~~~~~~~Dl~d~~~~~~~~~-   78 (348)
                      .++++++|||||+|. ||.++++.|+++|++|++++ |+..+. ... .+    .....++.++.+|++|.+++.++++ 
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~  751 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  751 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence            456789999999999 99999999999999999985 544322 111 11    1113468899999999988877652 


Q ss_pred             ------------CCCEEEEccccCccc-cccccc--cccchhhhhhhhhHHHHHHHHHHHhhcC-----CcceEEEeccc
Q 035965           79 ------------GCDGVFHVAASMEFD-INVKDN--IETYVQSTVINPAIQSTLNLLKACLKSE-----SVKRVVLTSSV  138 (348)
Q Consensus        79 ------------~~d~Vih~a~~~~~~-~~~~~~--~~~~~~~~~~~~nv~~~~~ll~~~~~~~-----~~~~~v~~SS~  138 (348)
                                  .+|+||||||..... ...+.+  .++|  ...+++|+.++..++++++...     ...+||++||.
T Consensus       752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~--~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~  829 (1887)
T 2uv8_A          752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFA--HRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  829 (1887)
T ss_dssp             HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHH--HHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHH--HHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence                        489999999976443 222222  3444  5889999999999999874322     13689999997


Q ss_pred             eeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHH-HHHHHHhCC--CcEEEEecCccccCCCCCCCC
Q 035965          139 STITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEET-AFKFANENK--IDLVSVITTTVAGPFLTSSVP  215 (348)
Q Consensus       139 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~~--~~~~~lR~~~v~G~~~~~~~~  215 (348)
                      ....+                           ....|+.||.+.+.+ .+.++++.+  |+++.+.||+|.|........
T Consensus       830 ag~~g---------------------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~  882 (1887)
T 2uv8_A          830 HGTFG---------------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANN  882 (1887)
T ss_dssp             TTCSS---------------------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CC
T ss_pred             HhccC---------------------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccch
Confidence            64321                           113599999999998 666666543  999999999998532111001


Q ss_pred             chHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          216 SSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ....    ....    ++          .| +...+|+|+++++++...
T Consensus       883 ~~~~----~~~~----~p----------lr-~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          883 IIAE----GIEK----MG----------VR-TFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             TTHH----HHHT----TS----------CC-CEEHHHHHHHHHGGGSHH
T ss_pred             hHHH----HHHh----cC----------CC-CCCHHHHHHHHHHHhCCC
Confidence            0110    0000    11          01 458999999999998764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.62  E-value=1.1e-15  Score=154.11  Aligned_cols=210  Identities=16%  Similarity=0.096  Sum_probs=140.2

Q ss_pred             CCCCCCeEEEeCCCCh-hHHHHHHHHHHCCCeEEEEE-cCCCcc-ccc-cc----cCCCCCeEEEEccCCCcchHHHhhc
Q 035965            7 STGRSKTFCVTGANGY-IGSWLVKTLLERGYIVHATV-RDPGKL-QIF-SK----WTRSDRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGf-iG~~l~~~L~~~g~~V~~~~-r~~~~~-~~~-~~----~~~~~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      +.+++|++|||||+|. ||.++++.|+++|++|++++ |+..+. ... .+    .....++.++.+|++|.+++.++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            3456789999999999 99999999999999999984 554332 111 11    1113467889999999998877653


Q ss_pred             -------------CCCEEEEccccCccc-cccccc--cccchhhhhhhhhHHHHHHHHHHHhhcC-----CcceEEEecc
Q 035965           79 -------------GCDGVFHVAASMEFD-INVKDN--IETYVQSTVINPAIQSTLNLLKACLKSE-----SVKRVVLTSS  137 (348)
Q Consensus        79 -------------~~d~Vih~a~~~~~~-~~~~~~--~~~~~~~~~~~~nv~~~~~ll~~~~~~~-----~~~~~v~~SS  137 (348)
                                   .+|+|||+||..... ...+.+  .++|  ...+++|+.++..++++++...     ...+||++||
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~--~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISS  629 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFA--HRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  629 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHH--HHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCS
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHH--HHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEC
Confidence                         489999999976443 222222  3444  5789999999999999873321     1368999999


Q ss_pred             ceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHH-HHHHHHhCC--CcEEEEecCccccCCCCCCC
Q 035965          138 VSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEET-AFKFANENK--IDLVSVITTTVAGPFLTSSV  214 (348)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~~--~~~~~lR~~~v~G~~~~~~~  214 (348)
                      .....+                           ....|+.||.+.+.+ .+.++++.+  +++..+.||.|.|.......
T Consensus       630 iAG~~G---------------------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~  682 (1688)
T 2pff_A          630 NHGTFG---------------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN  682 (1688)
T ss_dssp             CTTTSS---------------------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT
T ss_pred             hHhccC---------------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc
Confidence            753321                           113599999999998 444454433  88888999988753221100


Q ss_pred             CchHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          215 PSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      .        ........++          .| +...+|+|+++++++...
T Consensus       683 e--------~~~~~l~~ip----------lR-~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          683 N--------IIAEGIEKMG----------VR-TFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             T--------TCSTTTSSSS----------CC-CCCCCTTHHHHHHHTSTT
T ss_pred             h--------HHHHHHHhCC----------CC-CCCHHHHHHHHHHHhCCC
Confidence            0        0000000011          11 347899999999998765

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.59  E-value=2.2e-14  Score=148.91  Aligned_cols=209  Identities=17%  Similarity=0.112  Sum_probs=139.7

Q ss_pred             CCCCCeEEEeCCCCh-hHHHHHHHHHHCCCeEEEEEcC-CCcc-ccc-----cccCCCCCeEEEEccCCCcchHHHhhc-
Q 035965            8 TGRSKTFCVTGANGY-IGSWLVKTLLERGYIVHATVRD-PGKL-QIF-----SKWTRSDRLRLFQADLQVEGSFDKAVM-   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGf-iG~~l~~~L~~~g~~V~~~~r~-~~~~-~~~-----~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   78 (348)
                      .++++++|||||+|. ||.++++.|+++|++|++++++ ..+. ...     .......++.++.+|++|.+++.++++ 
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            456789999999999 9999999999999999998644 3322 111     111123468899999999998877653 


Q ss_pred             ----------CCCEEEEccccCccc-cccccc--cccchhhhhhhhhHHHHHHHHHHHhhcC-----CcceEEEecccee
Q 035965           79 ----------GCDGVFHVAASMEFD-INVKDN--IETYVQSTVINPAIQSTLNLLKACLKSE-----SVKRVVLTSSVST  140 (348)
Q Consensus        79 ----------~~d~Vih~a~~~~~~-~~~~~~--~~~~~~~~~~~~nv~~~~~ll~~~~~~~-----~~~~~v~~SS~~~  140 (348)
                                .+|+|||+||..... ...+.+  .++|  ...+++|+.++..++++++...     ...+||++||...
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~--~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag  806 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELA--HRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHG  806 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSS
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHH--HHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhh
Confidence                      489999999976443 222222  3444  5889999999999887743211     1368999999764


Q ss_pred             eeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-C--CCcEEEEecCccccCCCCCCCCch
Q 035965          141 ITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-N--KIDLVSVITTTVAGPFLTSSVPSS  217 (348)
Q Consensus       141 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~--~~~~~~lR~~~v~G~~~~~~~~~~  217 (348)
                      +.+  .                         ...|+.+|.+.+.+...+..+ .  +++++.+.||++-|.....   . 
T Consensus       807 ~~g--g-------------------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~---~-  855 (1878)
T 2uv9_A          807 TFG--N-------------------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMS---A-  855 (1878)
T ss_dssp             SSS--C-------------------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCS---H-
T ss_pred             ccC--C-------------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccc---c-
Confidence            322  1                         125999999999987765433 1  3999999999987322111   0 


Q ss_pred             HHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          218 IQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ..........    ++          .| +...+|+|+++++++...
T Consensus       856 ~~~~~~~~~~----~p----------lr-~~sPeEVA~avlfLaSd~  887 (1878)
T 2uv9_A          856 NNLVAEGVEK----LG----------VR-TFSQQEMAFNLLGLMAPA  887 (1878)
T ss_dssp             HHHTHHHHHT----TT----------CC-CBCHHHHHHHHHHHHSHH
T ss_pred             chhhHHHHHh----cC----------CC-CCCHHHHHHHHHHHhCCc
Confidence            0001111111    11          01 348999999999988654

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.57  E-value=6.8e-14  Score=125.46  Aligned_cols=175  Identities=10%  Similarity=-0.067  Sum_probs=123.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHH-CCCeEEEEEcCCCcc-cc------------c-cccCCCCCeEEEEccCCCcchH
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLE-RGYIVHATVRDPGKL-QI------------F-SKWTRSDRLRLFQADLQVEGSF   73 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~-~g~~V~~~~r~~~~~-~~------------~-~~~~~~~~~~~~~~Dl~d~~~~   73 (348)
                      ..+|++|||||++.||.++++.|++ .|.+|++++|+.... ..            . ........+..+.+|++|.+++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            3478999999999999999999999 999999999865432 11            1 1111234678899999999888


Q ss_pred             HHhhc-------CCCEEEEccccCc-------------cccc---------------------cccccccchhhhhhhhh
Q 035965           74 DKAVM-------GCDGVFHVAASME-------------FDIN---------------------VKDNIETYVQSTVINPA  112 (348)
Q Consensus        74 ~~~~~-------~~d~Vih~a~~~~-------------~~~~---------------------~~~~~~~~~~~~~~~~n  112 (348)
                      .++++       .+|++||+||...             ....                     ...+.++|  ...+++|
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~--~~~v~Vn  202 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEI--DSTVAVM  202 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHH--HHHHHHH
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHH--HHHHHhh
Confidence            77654       5899999998741             1110                     12234445  4677888


Q ss_pred             HHHHH-HHHHHHhhcC---CcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHH
Q 035965          113 IQSTL-NLLKACLKSE---SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFK  188 (348)
Q Consensus       113 v~~~~-~ll~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  188 (348)
                      ..+.. .+++++....   ...++|.+||.....+.+.                       .....|+.||.+.+.+.+.
T Consensus       203 ~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~-----------------------~~~~aY~AaKaal~~ltrs  259 (405)
T 3zu3_A          203 GGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDI-----------------------YWNGSIGAAKKDLDQKVLA  259 (405)
T ss_dssp             SSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTT-----------------------TTTSHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCC-----------------------ccchHHHHHHHHHHHHHHH
Confidence            77765 5565544221   1368999999764322211                       0114799999999999999


Q ss_pred             HHHh---C-CCcEEEEecCccccC
Q 035965          189 FANE---N-KIDLVSVITTTVAGP  208 (348)
Q Consensus       189 ~~~~---~-~~~~~~lR~~~v~G~  208 (348)
                      ++.+   . |+++..+.|+.|-.+
T Consensus       260 LA~Ela~~~GIRVNaVaPG~i~T~  283 (405)
T 3zu3_A          260 IRESLAAHGGGDARVSVLKAVVSQ  283 (405)
T ss_dssp             HHHHHHTTTSCEEEEEECCCCCCH
T ss_pred             HHHHhCcccCeEEEEEEeCCCcCc
Confidence            8877   5 899999999988665

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.57  E-value=8.5e-15  Score=140.73  Aligned_cols=168  Identities=18%  Similarity=0.063  Sum_probs=121.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccC-CCcchHHH-h---hcCCCE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADL-QVEGSFDK-A---VMGCDG   82 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~-~---~~~~d~   82 (348)
                      .+++|+++||||++.||.++++.|+++|++|++.+|...+.....+.....++..+.+|+ .+.+.+.+ +   +.++|+
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi  398 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI  398 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence            345789999999999999999999999999999886432211111111123456677888 55544322 2   236999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      +|||||........+.+.++|  ...+++|+.|+..+++++..    .+ ..+||++||.....+..             
T Consensus       399 LVnNAGi~~~~~~~~~~~~~~--~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~~~-------------  462 (604)
T 2et6_A          399 LVNNAGILRDRSFAKMSKQEW--DSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGNF-------------  462 (604)
T ss_dssp             EEECCCCCCCBCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCT-------------
T ss_pred             EEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCC-------------
Confidence            999999865443334444555  58899999999999888753    23 47999999987543321             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecC
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITT  203 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~  203 (348)
                                  ....|+.||.+...+.+.++.+   +||++..+.|+
T Consensus       463 ------------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG  498 (604)
T 2et6_A          463 ------------GQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH  498 (604)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             ------------CChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC
Confidence                        2246999999999999998876   58999999998

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.55  E-value=1.8e-14  Score=142.61  Aligned_cols=207  Identities=18%  Similarity=0.167  Sum_probs=146.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHH-HCCC-eEEEEEcCCCcc----cc-ccccCCCCCeEEEEccCCCcchHHHhhc----
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLL-ERGY-IVHATVRDPGKL----QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~-~~g~-~V~~~~r~~~~~----~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      ..++++||||+|.||..+++.|+ ++|. +|++++|+..+.    .. ..+.....++.++.+|++|.+++.++++    
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            46789999999999999999999 7898 589999974321    11 1111234568899999999999988775    


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                        .+|+|||+|+........+.+.++|  ...+++|+.|+.++.+++. .. . +||++||.+.+.+.+.          
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~--~~~~~~nv~G~~~l~~~~~-~~-l-~iV~~SS~ag~~g~~g----------  673 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERL--DQVLRPKVDGARNLLELID-PD-V-ALVLFSSVSGVLGSGG----------  673 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHH--HHHHCCCCCHHHHHHHHSC-TT-S-EEEEEEETHHHHTCSS----------
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHH--HHHHHHHHHHHHHHHHHHh-hC-C-EEEEEccHHhcCCCCC----------
Confidence              3699999999876655445555656  5789999999999999883 23 4 8999999876554332          


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                     ...|+.+|...+.+.+.+.. .|++++.+.||.+-.++....   ........+..        .
T Consensus       674 ---------------~~~YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t~g~~~~---~~~~~~~~~~~--------~  726 (795)
T 3slk_A          674 ---------------QGNYAAANSFLDALAQQRQS-RGLPTRSLAWGPWAEHGMAST---LREAEQDRLAR--------S  726 (795)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSCCCHHHH---HHHHHHHHHHH--------T
T ss_pred             ---------------CHHHHHHHHHHHHHHHHHHH-cCCeEEEEECCeECcchhhcc---ccHHHHHHHHh--------c
Confidence                           24699999888877776654 699999999998765431100   00000011100        0


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                      ...       .+..+++...+..++..+.
T Consensus       727 g~~-------~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          727 GLL-------PISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             TBC-------CCCHHHHHHHHHHHHTSSC
T ss_pred             CCC-------CCCHHHHHHHHHHHHhCCC
Confidence            111       5678888999888888754

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.54  E-value=3e-14  Score=136.97  Aligned_cols=165  Identities=19%  Similarity=0.086  Sum_probs=117.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC---------Ccc-cccc-ccCCCCCeEEEEccCCCcchHHHh
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP---------GKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKA   76 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~---------~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~   76 (348)
                      .+++|+++||||++.||+++++.|+++|++|++.+|+.         ... .... +...  +.+ ..+|+.|.+++.++
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~--g~~-~~~d~~d~~~~~~~   81 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN--GGV-AVADYNNVLDGDKI   81 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT--TCE-EEEECCCTTCHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc--CCe-EEEEcCCHHHHHHH
Confidence            45678999999999999999999999999999998754         211 1111 1111  112 23577666544333


Q ss_pred             h-------cCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecC
Q 035965           77 V-------MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKD  145 (348)
Q Consensus        77 ~-------~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~  145 (348)
                      +       .++|++|||||........+.+.++|  ...+++|+.|+..+++++..    .+ ..+||++||.....+.+
T Consensus        82 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~--~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~~  158 (604)
T 2et6_A           82 VETAVKNFGTVHVIINNAGILRDASMKKMTEKDY--KLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNF  158 (604)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCC
Confidence            2       36999999999765443334445556  58899999999999887753    23 47999999987554322


Q ss_pred             CCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecC
Q 035965          146 SSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITT  203 (348)
Q Consensus       146 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~  203 (348)
                                               ....|+.||.+...+.+.++.+   +||++..+.|+
T Consensus       159 -------------------------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg  194 (604)
T 2et6_A          159 -------------------------GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL  194 (604)
T ss_dssp             -------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             -------------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence                                     2246999999999999998876   47999999996

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.51  E-value=1.6e-13  Score=124.14  Aligned_cols=175  Identities=13%  Similarity=-0.083  Sum_probs=121.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHH-CCCeEEEEEcCCCcc-cc-------------ccccCCCCCeEEEEccCCCcchHH
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLE-RGYIVHATVRDPGKL-QI-------------FSKWTRSDRLRLFQADLQVEGSFD   74 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~-~g~~V~~~~r~~~~~-~~-------------~~~~~~~~~~~~~~~Dl~d~~~~~   74 (348)
                      .+|++|||||++.||.++++.|++ .|.+|++++|+.... ..             .........+..+.+|++|.+++.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            478999999999999999999999 999999999876543 11             111112346788999999998776


Q ss_pred             Hhh--------cCCCEEEEccccC-------------ccccc---------------------cccccccchhhhhhhhh
Q 035965           75 KAV--------MGCDGVFHVAASM-------------EFDIN---------------------VKDNIETYVQSTVINPA  112 (348)
Q Consensus        75 ~~~--------~~~d~Vih~a~~~-------------~~~~~---------------------~~~~~~~~~~~~~~~~n  112 (348)
                      +++        ..+|++||+||..             .....                     ...+.++|  ...+++|
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~--~~~v~Vn  217 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEI--EDTITVM  217 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHH--HHHHHHH
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHH--HHHHHhh
Confidence            654        3579999999862             11110                     01223334  3556666


Q ss_pred             HHHHH-HHHHHHhhcC---CcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHH
Q 035965          113 IQSTL-NLLKACLKSE---SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFK  188 (348)
Q Consensus       113 v~~~~-~ll~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  188 (348)
                      ..+.. .+++++....   ...++|++||.....+.+.                       .....|+.||.+.+.+.+.
T Consensus       218 ~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~-----------------------~~~~aY~ASKaAl~~lTrs  274 (422)
T 3s8m_A          218 GGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPI-----------------------YWHGALGKAKVDLDRTAQR  274 (422)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHH-----------------------HTSHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCC-----------------------ccchHHHHHHHHHHHHHHH
Confidence            66654 5666554321   1368999999764321111                       0114699999999999999


Q ss_pred             HHHh---CCCcEEEEecCccccCC
Q 035965          189 FANE---NKIDLVSVITTTVAGPF  209 (348)
Q Consensus       189 ~~~~---~~~~~~~lR~~~v~G~~  209 (348)
                      ++.+   +||++..+.||.|-.+.
T Consensus       275 LA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          275 LNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             HHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             HHHHhCccCEEEEEEEcCCCcChh
Confidence            8876   58999999999987764

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.46  E-value=6.6e-13  Score=121.07  Aligned_cols=175  Identities=10%  Similarity=-0.033  Sum_probs=118.4

Q ss_pred             CCCCeEEEeCCCChhHHH--HHHHHHHCCCeEEEEEcCCCcc-------------ccccc-cCCCCCeEEEEccCCCcch
Q 035965            9 GRSKTFCVTGANGYIGSW--LVKTLLERGYIVHATVRDPGKL-------------QIFSK-WTRSDRLRLFQADLQVEGS   72 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~--l~~~L~~~g~~V~~~~r~~~~~-------------~~~~~-~~~~~~~~~~~~Dl~d~~~   72 (348)
                      ..+|++|||||++.||.+  +++.|.++|++|++++|+....             .+... ......+.++.+|++|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            457899999999999999  9999999999999999965432             01101 1123468889999999988


Q ss_pred             HHHhhc-------CCCEEEEccccCc-------------cccc---------------------cccccccchhhhhhhh
Q 035965           73 FDKAVM-------GCDGVFHVAASME-------------FDIN---------------------VKDNIETYVQSTVINP  111 (348)
Q Consensus        73 ~~~~~~-------~~d~Vih~a~~~~-------------~~~~---------------------~~~~~~~~~~~~~~~~  111 (348)
                      +.++++       .+|++||+||...             ....                     ...+.++|  ...+++
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~--~~~~~v  215 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEI--EETRKV  215 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHH--HHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHH--HHHHHH
Confidence            877654       5899999998641             1100                     01122333  345666


Q ss_pred             hHHHHH-HHHHHHhhcC---CcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHH
Q 035965          112 AIQSTL-NLLKACLKSE---SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAF  187 (348)
Q Consensus       112 nv~~~~-~ll~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~  187 (348)
                      |..+.. .+++++....   ...++|.+||.+...+.+.                       .....|+.||.+.+.+.+
T Consensus       216 n~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~-----------------------~~~~aY~ASKaAL~~ltr  272 (418)
T 4eue_A          216 MGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKI-----------------------YREGTIGIAKKDLEDKAK  272 (418)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTT-----------------------TTTSHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCc-----------------------cccHHHHHHHHHHHHHHH
Confidence            655544 4555544322   1368999999753221111                       011579999999999998


Q ss_pred             HHHHh----CCCcEEEEecCccccC
Q 035965          188 KFANE----NKIDLVSVITTTVAGP  208 (348)
Q Consensus       188 ~~~~~----~~~~~~~lR~~~v~G~  208 (348)
                      .++.+    .|+++..+.|+.|-.+
T Consensus       273 sLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          273 LINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             HHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHhCCccCeEEEEEECCcCcCh
Confidence            88765    5799999999988765

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.34  E-value=4.9e-13  Score=119.14  Aligned_cols=173  Identities=14%  Similarity=0.021  Sum_probs=116.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-------eEEEEEcC----CCcc--ccccccCCCCCeEEEEccCCCcchHHHhh
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-------IVHATVRD----PGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAV   77 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-------~V~~~~r~----~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   77 (348)
                      ++||+||||+||||++++..|+..|+       +|.++++.    ..+.  ....+...  ...+ ..|+....++.+++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~--~~~~-~~~i~~~~~~~~al   81 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC--AFPL-LAGMTAHADPMTAF   81 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT--TCTT-EEEEEEESSHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh--cccc-cCcEEEecCcHHHh
Confidence            46999999999999999999998885       89998887    3212  11111110  0111 24555556778889


Q ss_pred             cCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           78 MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        78 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      +++|+|||+|+......  ..     . ..++..|+.+++++++++.+.+ +..+||++|.-...  ...     .....
T Consensus        82 ~~aD~Vi~~ag~~~~~g--~~-----r-~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~--~t~-----~~~~~  146 (329)
T 1b8p_A           82 KDADVALLVGARPRGPG--ME-----R-KDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANT--NAY-----IAMKS  146 (329)
T ss_dssp             TTCSEEEECCCCCCCTT--CC-----H-HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH--HHH-----HHHHT
T ss_pred             CCCCEEEEeCCCCCCCC--CC-----H-HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHH--HHH-----HHHHH
Confidence            99999999999654322  12     2 3788999999999999999984 55689999862100  000     00001


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCC
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFL  210 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~  210 (348)
                      ..-.         ++...++.+++...++...+++..+++...++...|+|.+.
T Consensus       147 ~~~~---------p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg  191 (329)
T 1b8p_A          147 APSL---------PAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHS  191 (329)
T ss_dssp             CTTS---------CGGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSS
T ss_pred             cCCC---------CHHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccC
Confidence            0000         02235888888888888888888888877788777889543

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.33  E-value=4.8e-12  Score=95.16  Aligned_cols=94  Identities=27%  Similarity=0.269  Sum_probs=75.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ++++|+|+|+ |++|+++++.|.+.| ++|++++|++.+. ...     ..++.++.+|+.+.+.+.++++++|+|||++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~   77 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-----RMGVATKQVDAKDEAGLAKALGGFDAVISAA   77 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-----TTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-----hCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            4679999999 999999999999999 9999999987654 222     1367889999999999999999999999998


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEE
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL  134 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  134 (348)
                      +..              .          ...+++++.+.+ ++++.+
T Consensus        78 ~~~--------------~----------~~~~~~~~~~~g-~~~~~~   99 (118)
T 3ic5_A           78 PFF--------------L----------TPIIAKAAKAAG-AHYFDL   99 (118)
T ss_dssp             CGG--------------G----------HHHHHHHHHHTT-CEEECC
T ss_pred             Cch--------------h----------hHHHHHHHHHhC-CCEEEe
Confidence            521              0          246788888888 554443

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.31  E-value=6e-12  Score=137.46  Aligned_cols=171  Identities=18%  Similarity=0.140  Sum_probs=118.7

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCe-EEEEEcCCCcc-c----cccccCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYI-VHATVRDPGKL-Q----IFSKWTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~-V~~~~r~~~~~-~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .+++++||||+|.||..+++.|+++|.+ |++++|+..+. .    ...+.....++.++.+|++|.+++.++++     
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            4678999999999999999999999997 77788875432 1    11111123467888999999988877654     


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                       .+|+|||+|+........+.+.++|  ...+++|+.|+.++.+++... ....+||++||.....+..           
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~--~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~----------- 2029 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFF--QDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNA----------- 2029 (2512)
T ss_dssp             SCEEEEEECCCC------------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCT-----------
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHH--HHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCC-----------
Confidence             5899999999765443334444555  588999999999998887653 2247999999987543322           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccC
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGP  208 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~  208 (348)
                                    ....|+.+|...+.+.+.... .|++...+..+.+-+.
T Consensus      2030 --------------g~~~Y~aaKaal~~l~~~rr~-~Gl~~~a~~~g~~~~~ 2066 (2512)
T 2vz8_A         2030 --------------GQANYGFANSAMERICEKRRH-DGLPGLAVQWGAIGDV 2066 (2512)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHH-TTSCCCEEEECCBCTT
T ss_pred             --------------CcHHHHHHHHHHHHHHHHHHH-CCCcEEEEEccCcCCc
Confidence                          224699999999998887554 4899888888766443

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.22  E-value=4.9e-11  Score=105.92  Aligned_cols=117  Identities=13%  Similarity=0.005  Sum_probs=82.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ++|||+||||+||+|+.++..|+.+|  ++|+++++++.......+........+ .+ +.+..++.++++++|+|||+|
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al~gaDvVi~~a   84 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVV-RG-FLGQQQLEAALTGMDLIIVPA   84 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEE-EE-EESHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceE-EE-EeCCCCHHHHcCCCCEEEEcC
Confidence            45799999999999999999999998  899999986642211111110011111 11 223446778899999999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      +......  .      ....++..|+.+++++++++.+.+ .+.+|+++|
T Consensus        85 g~~~~~g--~------~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S  125 (326)
T 1smk_A           85 GVPRKPG--M------TRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLIS  125 (326)
T ss_dssp             CCCCCSS--C------CCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred             CcCCCCC--C------CHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence            9644322  1      123778999999999999999988 666777766

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.19  E-value=4.8e-10  Score=122.68  Aligned_cols=235  Identities=16%  Similarity=0.136  Sum_probs=144.4

Q ss_pred             CCCCCeEEEeCCCCh-hHHHHHHHHHHCCCeEEEEEcCCCc-----c-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-
Q 035965            8 TGRSKTFCVTGANGY-IGSWLVKTLLERGYIVHATVRDPGK-----L-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGf-iG~~l~~~L~~~g~~V~~~~r~~~~-----~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-   78 (348)
                      .+++|++|||||++. ||.++++.|+++|.+|++++|+..+     . .... .......+..+.+|++|.+++.++++ 
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            357899999999999 9999999999999999999998765     2 1111 11123457788999999988876632 


Q ss_pred             ----------CCCEEEEcccc----Cccc-cccccccccchh--hhhhhhhHHHHHHHHHHHhhc----CCcc--eEEEe
Q 035965           79 ----------GCDGVFHVAAS----MEFD-INVKDNIETYVQ--STVINPAIQSTLNLLKACLKS----ESVK--RVVLT  135 (348)
Q Consensus        79 ----------~~d~Vih~a~~----~~~~-~~~~~~~~~~~~--~~~~~~nv~~~~~ll~~~~~~----~~~~--~~v~~  135 (348)
                                ++|++|||||.    .... .......++|..  +..+++|+.++..+++.+...    +...  .+|..
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence                      47999999997    2111 111222333311  133788899888888776542    2111  12222


Q ss_pred             ccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh--C--CCcEEEEecCccccCCCC
Q 035965          136 SSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE--N--KIDLVSVITTTVAGPFLT  211 (348)
Q Consensus       136 SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~--~~~~~~lR~~~v~G~~~~  211 (348)
                      +|.. .    .      ...               ....|+.||.+.+.+.+.++.+  .  +++++.+.||+|-+....
T Consensus      2293 ~ss~-~----g------~~g---------------~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~ 2346 (3089)
T 3zen_D         2293 GSPN-R----G------MFG---------------GDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLM 2346 (3089)
T ss_dssp             ECSS-T----T------SCS---------------SCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTT
T ss_pred             CCcc-c----c------cCC---------------CchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCccc
Confidence            1110 0    0      000               1135999999999999999988  3  488889999988754322


Q ss_pred             CCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCC---Cc--eE-EEecc----CcChHH
Q 035965          212 SSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRA---QG--QY-ICCVK----SCPISE  281 (348)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~--~y-~~~~~----~~s~~e  281 (348)
                      .........+ .   .    .          ..| ....+|+|.++++++.....   ++  ++ .+++.    ...+.+
T Consensus      2347 ~~~~~~~~~~-~---~----~----------~~r-~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~ 2407 (3089)
T 3zen_D         2347 GQNDAIVSAV-E---E----A----------GVT-TYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAE 2407 (3089)
T ss_dssp             TTTTTTHHHH-G---G----G----------SCB-CEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHH
T ss_pred             ccchhHHHHH-H---h----c----------CCC-CCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHH
Confidence            1101010000 0   0    0          011 23889999999998874321   11  23 33332    357888


Q ss_pred             HHHHHH
Q 035965          282 FIDHLK  287 (348)
Q Consensus       282 l~~~i~  287 (348)
                      ++..+.
T Consensus      2408 ~~~~~~ 2413 (3089)
T 3zen_D         2408 LAAKAR 2413 (3089)
T ss_dssp             HTHHHH
T ss_pred             HHHHHH
Confidence            777653

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=99.02  E-value=1.2e-10  Score=102.40  Aligned_cols=111  Identities=14%  Similarity=0.026  Sum_probs=76.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEc--CCCcc-----ccccccCCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY--IVHATVR--DPGKL-----QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r--~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      |||+||||+||+|++++..|+.+|.  ++.++++  +..+.     .+.........+++.. +  +    .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence            5899999999999999999998875  6788887  43221     1111000112233332 1  1    445789999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSV  138 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~  138 (348)
                      |||+|+......  .      ....++..|+.+++++++++++.+ ...+|+++|-
T Consensus        74 Vi~~ag~~~~~g--~------~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~SN  120 (303)
T 1o6z_A           74 VVITAGIPRQPG--Q------TRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTSN  120 (303)
T ss_dssp             EEECCCCCCCTT--C------CHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECCS
T ss_pred             EEEcCCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEeCC
Confidence            999999654322  1      123678999999999999999998 5667777663

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.01  E-value=1.1e-10  Score=103.05  Aligned_cols=167  Identities=13%  Similarity=0.085  Sum_probs=102.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEc--CCCcc-----ccccccCCC-CCeEEEEccCCCcchHHHhhcCCC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY--IVHATVR--DPGKL-----QIFSKWTRS-DRLRLFQADLQVEGSFDKAVMGCD   81 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r--~~~~~-----~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d   81 (348)
                      |||+||||+||+|++++..|+.+|.  ++.++++  +..+.     .+....... ..+++...+    +++.++++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence            4899999999999999999998874  6788887  43211     111110001 122222211    23566789999


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTP  161 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~  161 (348)
                      +|||+|+......  ..     . ..++..|+.+++++++++++.+  ..+|+++|-= +.....     ...+...+  
T Consensus        77 ~Vi~~Ag~~~~~g--~~-----r-~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNP-v~~~t~-----~~~k~~~~--  138 (313)
T 1hye_A           77 VVIITSGVPRKEG--MS-----R-MDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNP-VDVMTY-----KALVDSKF--  138 (313)
T ss_dssp             EEEECCSCCCCTT--CC-----H-HHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSS-HHHHHH-----HHHHHHCC--
T ss_pred             EEEECCCCCCCCC--Cc-----H-HHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCc-HHHHHH-----HHHHhhCc--
Confidence            9999999654322  12     2 3789999999999999999988  4566665531 110000     00111101  


Q ss_pred             cchhhccCCCcchhHh-hHHHHHHHHHHHHHhCCCcEEEEecCccccCC
Q 035965          162 IHHVWNKKASGWVYVL-SKLLSEETAFKFANENKIDLVSVITTTVAGPF  209 (348)
Q Consensus       162 ~~~~~~~~~~~~~Y~~-sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~  209 (348)
                              ++...+|. +.+...++....++..+++...++. .++|..
T Consensus       139 --------p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G~H  178 (313)
T 1hye_A          139 --------ERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIGEH  178 (313)
T ss_dssp             --------CTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEECS
T ss_pred             --------ChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEeecc
Confidence                    13345777 6776777777777776776555665 566643

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.94  E-value=4.6e-10  Score=98.11  Aligned_cols=82  Identities=21%  Similarity=0.133  Sum_probs=65.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      +++++++||||+|++|+++++.|++.|++|++++|+..+. ..........++.++.+|++|.+++.++++++|+|||++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a  196 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG  196 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence            5678999999999999999999999999999999986544 222111000145678899999999999999999999999


Q ss_pred             ccC
Q 035965           88 ASM   90 (348)
Q Consensus        88 ~~~   90 (348)
                      +..
T Consensus       197 g~g  199 (287)
T 1lu9_A          197 AIG  199 (287)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            853

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.91  E-value=6.5e-09  Score=80.68  Aligned_cols=101  Identities=18%  Similarity=0.134  Sum_probs=73.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a   87 (348)
                      ++++|+|+|+ |.+|+.+++.|.+.|++|+++++++.+. ....     ....++.+|..+.+.+.++ ++++|+||+++
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-----~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~   78 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-----YATHAVIANATEENELLSLGIRNFEYVIVAI   78 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT-----TCSEEEECCTTCHHHHHTTTGGGCSEEEECC
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----hCCEEEEeCCCCHHHHHhcCCCCCCEEEECC
Confidence            4678999998 9999999999999999999999976543 2211     1456788999998877765 67899999987


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      +..                  .+.|    ..+++.+++.+ .+++|..++..
T Consensus        79 ~~~------------------~~~~----~~~~~~~~~~~-~~~ii~~~~~~  107 (144)
T 2hmt_A           79 GAN------------------IQAS----TLTTLLLKELD-IPNIWVKAQNY  107 (144)
T ss_dssp             CSC------------------HHHH----HHHHHHHHHTT-CSEEEEECCSH
T ss_pred             CCc------------------hHHH----HHHHHHHHHcC-CCeEEEEeCCH
Confidence            631                  0111    23566677777 56777666543

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.89  E-value=2.6e-09  Score=98.98  Aligned_cols=112  Identities=15%  Similarity=0.201  Sum_probs=76.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ++++|+|+| +|++|+++++.|++.|++|++++|+..+. .+...   ..++..+.+|+.|.+++.++++++|+|||+++
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~---~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~   77 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG---VQHSTPISLDVNDDAALDAEVAKHDLVISLIP   77 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT---CTTEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh---cCCceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence            467999998 79999999999999999999999986554 22221   12477889999999889898999999999998


Q ss_pred             cCccccccccccccchhhhhhhh--hHHHHHHHHHHHhhcC
Q 035965           89 SMEFDINVKDNIETYVQSTVINP--AIQSTLNLLKACLKSE  127 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~--nv~~~~~ll~~~~~~~  127 (348)
                      ...........++  ....++..  ....+.+++++|++.|
T Consensus        78 ~~~~~~i~~a~l~--~g~~vvd~~~~~~~~~~l~~aA~~aG  116 (450)
T 1ff9_A           78 YTFHATVIKSAIR--QKKHVVTTSYVSPAMMELDQAAKDAG  116 (450)
T ss_dssp             --CHHHHHHHHHH--HTCEEEESSCCCHHHHHTHHHHHHTT
T ss_pred             cccchHHHHHHHh--CCCeEEEeecccHHHHHHHHHHHHCC
Confidence            6322110000000  00011111  1245788999999888

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.80  E-value=1e-08  Score=79.47  Aligned_cols=73  Identities=21%  Similarity=0.227  Sum_probs=60.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a   87 (348)
                      +|++|+|+|+ |++|+++++.|.++|++|+++++++.+. ....     .++.++.+|.+|++.+.++ ++++|+||.+.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-----~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~   78 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-----EGFDAVIADPTDESFYRSLDLEGVSAVLITG   78 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-----TTCEEEECCTTCHHHHHHSCCTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-----CCCcEEECCCCCHHHHHhCCcccCCEEEEec
Confidence            4678999998 9999999999999999999999987654 2222     2578899999999888776 46799999876


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      +
T Consensus        79 ~   79 (141)
T 3llv_A           79 S   79 (141)
T ss_dssp             S
T ss_pred             C
Confidence            5

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.78  E-value=1.8e-08  Score=77.73  Aligned_cols=73  Identities=18%  Similarity=0.175  Sum_probs=57.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a~   88 (348)
                      +|+|+|+|+ |++|+.+++.|.+.|++|++++|++... .+...    .++.++.+|..+.+.+.+. ++++|+||++..
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~----~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----IDALVINGDCTKIKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----CSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh----cCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence            468999997 9999999999999999999999976544 22211    1466788999988777654 678999999964

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.73  E-value=8.3e-08  Score=84.57  Aligned_cols=114  Identities=16%  Similarity=0.072  Sum_probs=79.2

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCccccccccCCCC--CeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQIFSKWTRSD--RLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |||.|+||+|++|+.++..|+..|  .+|.++++++.+.....+.....  +++.+.+    ..++.++++++|+||+++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~~~aDvVvi~a   76 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG----PEQLPDCLKGCDVVVIPA   76 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES----GGGHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecC----CCCHHHHhCCCCEEEECC
Confidence            489999999999999999999888  79999999762222111111111  1111111    135677889999999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      +......  ..     . ...+..|+..++.+++.+.+..+..++|++|-
T Consensus        77 g~~~~~g--~~-----r-~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           77 GVPRKPG--MT-----R-DDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             SCCCCTT--CC-----G-GGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CcCCCCC--Cc-----H-HHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            8754322  11     2 36789999999999999998875567777643

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.71  E-value=1.3e-08  Score=93.22  Aligned_cols=78  Identities=13%  Similarity=0.098  Sum_probs=62.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC---CeEEEEEcCCCcc-ccccccCC--CCCeEEEEccCCCcchHHHhhcC--CCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG---YIVHATVRDPGKL-QIFSKWTR--SDRLRLFQADLQVEGSFDKAVMG--CDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g---~~V~~~~r~~~~~-~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~--~d~   82 (348)
                      |++|+|+|| |++|+.+++.|++.|   .+|.+++|+..+. .+......  ..++..+.+|++|.+++.+++++  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            478999999 999999999999998   3899999987655 32221110  13588899999999999999886  999


Q ss_pred             EEEcccc
Q 035965           83 VFHVAAS   89 (348)
Q Consensus        83 Vih~a~~   89 (348)
                      |||+++.
T Consensus        80 Vin~ag~   86 (405)
T 4ina_A           80 VLNIALP   86 (405)
T ss_dssp             EEECSCG
T ss_pred             EEECCCc
Confidence            9999873

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.70  E-value=2.8e-08  Score=89.82  Aligned_cols=94  Identities=19%  Similarity=0.185  Sum_probs=72.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      .++|||+|.|| |++|+.+++.|.+ .++|.+.+++..+. ...      +.+..+..|+.|.+++.++++++|+||+++
T Consensus        14 g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~------~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~   85 (365)
T 3abi_A           14 GRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK------EFATPLKVDASNFDKLVEVMKEFELVIGAL   85 (365)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT------TTSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh------ccCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence            35678999998 9999999998864 68999999976544 222      356778999999999999999999999998


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      +...                        ...++++|.+.|  .++|=+|
T Consensus        86 p~~~------------------------~~~v~~~~~~~g--~~yvD~s  108 (365)
T 3abi_A           86 PGFL------------------------GFKSIKAAIKSK--VDMVDVS  108 (365)
T ss_dssp             CGGG------------------------HHHHHHHHHHHT--CEEEECC
T ss_pred             CCcc------------------------cchHHHHHHhcC--cceEeee
Confidence            6320                        125788888888  5677655

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.64  E-value=1.6e-08  Score=89.57  Aligned_cols=115  Identities=16%  Similarity=0.044  Sum_probs=77.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC--e-----EEEEEcCCC--cc--ccccccC-CCCCeEEEEccCCCcchHHHhhc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY--I-----VHATVRDPG--KL--QIFSKWT-RSDRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~--~-----V~~~~r~~~--~~--~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      ++||+||||+|+||++++..|+..|.  +     ++++++.+.  +.  ....+.. ..+-.    .++.......+.++
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~----~~~~~~~~~~~~~~   78 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL----KDVIATDKEEIAFK   78 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE----EEEEEESCHHHHTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc----CCEEEcCCcHHHhC
Confidence            46899999999999999999988765  5     888888542  11  1111110 01111    12222234566788


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcc-eEEEecc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK-RVVLTSS  137 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~v~~SS  137 (348)
                      ++|+|||+||......  .      .....++.|+..++++++++.+.+... +++.+|-
T Consensus        79 daDvVvitAg~prkpG--~------tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           79 DLDVAILVGSMPRRDG--M------ERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             TCSEEEECCSCCCCTT--C------CTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCEEEEeCCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            9999999998643222  2      224789999999999999999988333 5777664

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.59  E-value=8.3e-07  Score=79.02  Aligned_cols=82  Identities=12%  Similarity=-0.052  Sum_probs=62.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHH-HCCCeEEEEEcCCCcc-ccc-------------cccCCCCCeEEEEccCCCcchH
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLL-ERGYIVHATVRDPGKL-QIF-------------SKWTRSDRLRLFQADLQVEGSF   73 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~-~~g~~V~~~~r~~~~~-~~~-------------~~~~~~~~~~~~~~Dl~d~~~~   73 (348)
                      ..+|++|||||++.+|.+.+..|+ ..|..|+++.+..... ...             ...........+.+|++|.+.+
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            457899999999999999999998 6799999998854322 100             0111234678899999999888


Q ss_pred             HHhhc-------CCCEEEEccccC
Q 035965           74 DKAVM-------GCDGVFHVAASM   90 (348)
Q Consensus        74 ~~~~~-------~~d~Vih~a~~~   90 (348)
                      .++++       ++|++||++|..
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccc
Confidence            77764       589999999965

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.57  E-value=4.3e-07  Score=71.46  Aligned_cols=75  Identities=16%  Similarity=0.150  Sum_probs=58.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a~   88 (348)
                      ..++|+|+|+ |.+|+.+++.|.+.|++|++++|++.+......   ..+..++.+|..+.+.+.++ ++++|+||.+.+
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFSGFTVVGDAAEFETLKECGMEKADMVFAFTN   93 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence            4578999996 999999999999999999999998765422110   12566788998887777665 678999998865

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.54  E-value=2.5e-07  Score=76.94  Aligned_cols=76  Identities=18%  Similarity=0.245  Sum_probs=54.3

Q ss_pred             CCCeEEEeCC----------------CChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchH
Q 035965           10 RSKTFCVTGA----------------NGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSF   73 (348)
Q Consensus        10 ~~~~ilVtGa----------------tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   73 (348)
                      ++|+||||||                ||.+|.+++++|+++|++|+++.|.......     ...+++.+  |+...+++
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~-----~~~~~~~~--~v~s~~em   74 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE-----PHPNLSIR--EITNTKDL   74 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC-----CCTTEEEE--ECCSHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----CCCCeEEE--EHhHHHHH
Confidence            3689999999                9999999999999999999999996532110     01244444  44454443


Q ss_pred             H----HhhcCCCEEEEccccCcc
Q 035965           74 D----KAVMGCDGVFHVAASMEF   92 (348)
Q Consensus        74 ~----~~~~~~d~Vih~a~~~~~   92 (348)
                      .    +.+.++|++||+||...+
T Consensus        75 ~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           75 LIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHHHHHGGGCSEEEECSBCCSE
T ss_pred             HHHHHHhcCCCCEEEEcCccccc
Confidence            3    334579999999997544

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.53  E-value=1.6e-07  Score=73.76  Aligned_cols=76  Identities=20%  Similarity=0.306  Sum_probs=60.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC-cc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG-KL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~-~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~   86 (348)
                      ..++|+|+|+ |.+|+++++.|.+.|++|+++++++. +. .....  ...++.++.+|.+|++.+.++ ++++|+||-+
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~--~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR--LGDNADVIPGDSNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH--HCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHh--hcCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence            4578999996 99999999999999999999999752 11 11111  113688999999999988876 8899999987


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      .+
T Consensus        79 ~~   80 (153)
T 1id1_A           79 SD   80 (153)
T ss_dssp             SS
T ss_pred             cC
Confidence            64

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.51  E-value=1.1e-07  Score=88.27  Aligned_cols=78  Identities=15%  Similarity=0.225  Sum_probs=62.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ..++++|+|+|+ |++|+.+++.|++. |++|++++|+..+. .+...    .++..+.+|+.|.+++.++++++|+|||
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~~~~~~~~D~~d~~~l~~~l~~~DvVIn   94 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----SGSKAISLDVTDDSALDKVLADNDVVIS   94 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----GTCEEEECCTTCHHHHHHHHHTSSEEEE
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----cCCcEEEEecCCHHHHHHHHcCCCEEEE
Confidence            345789999997 99999999999998 78999999987655 33221    2467788999999889888899999999


Q ss_pred             ccccC
Q 035965           86 VAASM   90 (348)
Q Consensus        86 ~a~~~   90 (348)
                      +++..
T Consensus        95 ~tp~~   99 (467)
T 2axq_A           95 LIPYT   99 (467)
T ss_dssp             CSCGG
T ss_pred             CCchh
Confidence            99864

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.46  E-value=8.4e-08  Score=85.14  Aligned_cols=113  Identities=12%  Similarity=0.017  Sum_probs=75.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc-----ccccccCCCCCeEEEEccCCCcchHHHhhcCCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL-----QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   81 (348)
                      |.++||.|+|++|++|+.++..|+..|  .+|.++|++..+.     .+........++.       -..+..++++++|
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-------~t~d~~~al~dAD   78 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-------FTSDIKEALTDAK   78 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-------EESCHHHHHTTEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-------EcCCHHHHhCCCC
Confidence            346799999999999999999999988  5899999875433     1221111001111       1234667788999


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcce-EEEec
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR-VVLTS  136 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~-~v~~S  136 (348)
                      +||.+||......  .      .....+..|+...+.+.+.+.+.++... ++.+|
T Consensus        79 vVvitaG~p~kpG--~------~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           79 YIVSSGGAPRKEG--M------TREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             EEEECCC---------------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             EEEEccCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            9999998643222  1      2247789999999999999998874453 55554

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.46  E-value=6.5e-07  Score=74.24  Aligned_cols=75  Identities=16%  Similarity=0.121  Sum_probs=56.2

Q ss_pred             CCCCCeEEEeCC----------------CChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcc
Q 035965            8 TGRSKTFCVTGA----------------NGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG   71 (348)
Q Consensus         8 ~~~~~~ilVtGa----------------tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   71 (348)
                      .+++|+||||||                ||.+|.+++++|+++|++|+++++... ...   +   .+++  ..|+.+.+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~---~---~g~~--~~dv~~~~   75 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT---P---PFVK--RVDVMTAL   75 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC---C---TTEE--EEECCSHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc---C---CCCe--EEccCcHH
Confidence            356899999999                799999999999999999999987542 111   1   1333  46777766


Q ss_pred             hHHHh----hcCCCEEEEccccCc
Q 035965           72 SFDKA----VMGCDGVFHVAASME   91 (348)
Q Consensus        72 ~~~~~----~~~~d~Vih~a~~~~   91 (348)
                      ++.+.    +.++|++||+||...
T Consensus        76 ~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           76 EMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHHHHhcCCCCEEEECCcccC
Confidence            55443    346999999999754

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.40  E-value=1.4e-06  Score=70.55  Aligned_cols=74  Identities=16%  Similarity=0.099  Sum_probs=60.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh--hcCCCEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA--VMGCDGVF   84 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~d~Vi   84 (348)
                      +.+++|+|+|+ |.+|..+++.|.+. |++|+++++++.+. .+..     .++.++.+|.++.+.+.++  ++++|+||
T Consensus        37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-----~g~~~~~gd~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-----EGRNVISGDATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-----TTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-----CCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence            44678999995 99999999999999 99999999987654 2221     2577889999998888776  77899999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      .+.+
T Consensus       111 ~~~~  114 (183)
T 3c85_A          111 LAMP  114 (183)
T ss_dssp             ECCS
T ss_pred             EeCC
Confidence            8754

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.40  E-value=1.6e-06  Score=66.89  Aligned_cols=73  Identities=14%  Similarity=0.119  Sum_probs=60.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a   87 (348)
                      ++++|+|.|+ |.+|..+++.|.+.|++|+++++++.+. .+..     .++.++.+|.++++.+.++ ++++|+||-+.
T Consensus         6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-----~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (140)
T 3fwz_A            6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-----RGVRAVLGNAANEEIMQLAHLECAKWLILTI   79 (140)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-----TTCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-----cCCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence            3568999997 9999999999999999999999987655 2222     3688899999999888765 56899998775


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      +
T Consensus        80 ~   80 (140)
T 3fwz_A           80 P   80 (140)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.35  E-value=1.4e-06  Score=72.55  Aligned_cols=72  Identities=18%  Similarity=0.194  Sum_probs=59.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a~   88 (348)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++++++.+. .+...    .++.++.+|.++.+.+.++ ++++|+||-+.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK----LKATIIHGDGSHKEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH----SSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----cCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence            57999997 9999999999999999999999987654 32221    2578899999999988876 778999996643

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.28  E-value=4.2e-06  Score=73.77  Aligned_cols=111  Identities=11%  Similarity=0.106  Sum_probs=76.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-c----cccccC-CCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-Q----IFSKWT-RSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-~----~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      ++||.|+|+ |.+|+.++..|+..|.  +|++++++..+. .    +..... ....++....|       .+.++++|+
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aDv   76 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDADI   76 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCCE
Confidence            578999996 9999999999999886  899999876533 1    221111 11234443332       235779999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      ||.+|+......  .      .....+..|+...+.+.+.+.+..+..+++.+|-
T Consensus        77 Vvi~ag~p~kpG--~------~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           77 VCICAGANQKPG--E------TRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             EEECCSCCCCTT--C------CHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             EEEecccCCCCC--c------cHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            999998643222  1      2247789999999999999998875556666553

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.27  E-value=2.8e-06  Score=74.77  Aligned_cols=112  Identities=11%  Similarity=0.105  Sum_probs=67.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-----ccccccCCCCCeEEEEccCCCcchHHHhhcCCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-----QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   81 (348)
                      ..++||.|+|+ |.+|+.++..|+..|.  +|+++++++.+.     .+.........+.....|       .+.++++|
T Consensus         7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aD   78 (326)
T 3vku_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDAD   78 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCC
Confidence            44679999996 9999999999999886  899999875433     111111111234443322       24578999


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      +||++|+......  .      .....++.|+.-.+.+.+.+.+..+...++.+|
T Consensus        79 iVvi~ag~~~kpG--~------tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           79 LVVITAGAPQKPG--E------TRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             EEEECCCCC------------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             EEEECCCCCCCCC--c------hHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            9999998643222  1      224778889999999999999887555666655

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.24  E-value=1.4e-06  Score=75.04  Aligned_cols=35  Identities=23%  Similarity=0.424  Sum_probs=28.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHH-CCCeEEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLE-RGYIVHATVR   43 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~-~g~~V~~~~r   43 (348)
                      ++++||+|+|++|.+|+.+++.+.+ .|++++++..
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d   38 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALE   38 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            4557999999999999999999875 4788875544

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.16  E-value=2.5e-06  Score=69.87  Aligned_cols=74  Identities=19%  Similarity=0.179  Sum_probs=51.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHh---h--cCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKA---V--MGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~--~~~d~Vi   84 (348)
                      .+++|+|+||+|.||..+++.+...|.+|++++|++.+.......    +... ..|..+.+....+   .  .++|+||
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~----g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi  112 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL----GVEY-VGDSRSVDFADEILELTDGYGVDVVL  112 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT----CCSE-EEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCCE-EeeCCcHHHHHHHHHHhCCCCCeEEE
Confidence            357899999999999999999999999999999876544211111    2222 2466665433332   2  2589999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      ++++
T Consensus       113 ~~~g  116 (198)
T 1pqw_A          113 NSLA  116 (198)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9986

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=98.09  E-value=2.1e-06  Score=75.59  Aligned_cols=114  Identities=14%  Similarity=0.067  Sum_probs=76.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-----cccccc-CCCCCeEEE-EccCCCcchHHHhhcC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-----QIFSKW-TRSDRLRLF-QADLQVEGSFDKAVMG   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-----~~~~~~-~~~~~~~~~-~~Dl~d~~~~~~~~~~   79 (348)
                      .|+++||.|+|+ |.+|+.++..|+..|+ +|+++++++.+.     .+.... ......++. ..|      . +++++
T Consensus         4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d------~-~a~~~   75 (324)
T 3gvi_A            4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND------Y-AAIEG   75 (324)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS------G-GGGTT
T ss_pred             CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC------H-HHHCC
Confidence            456789999998 9999999999999998 999999987643     111110 000112222 122      2 46789


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      +|+||.+++......  .      .....+..|+...+.+.+.+.+..+...++.+|-
T Consensus        76 aDiVIiaag~p~k~G--~------~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           76 ADVVIVTAGVPRKPG--M------SRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             CSEEEECCSCCCC-------------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CCEEEEccCcCCCCC--C------CHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            999999998643222  1      1236788899999999999988874556666653

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=98.06  E-value=3.9e-06  Score=73.75  Aligned_cols=111  Identities=12%  Similarity=0.104  Sum_probs=70.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-c-cccccC----CCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-Q-IFSKWT----RSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~-~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      ++||.|+|| |.+|+.++..|+..|+ +|.++++++.+. . ...+..    .....++...  .|   . +.++++|+|
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~V   74 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTANSDVI   74 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-HHHCCCCEE
Confidence            478999998 9999999999999997 888998876543 1 111110    0011222211  12   2 457899999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      |.+++......  .      ........|+...+.+.+.+.+.. ...+|.+.|
T Consensus        75 i~a~g~p~~~g--~------~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t  119 (309)
T 1ur5_A           75 VVTSGAPRKPG--M------SREDLIKVNADITRACISQAAPLS-PNAVIIMVN  119 (309)
T ss_dssp             EECCCC----------------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECC
T ss_pred             EEcCCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcC
Confidence            99998643322  1      112567788888999999998887 444554444

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=98.04  E-value=4.9e-06  Score=73.27  Aligned_cols=114  Identities=14%  Similarity=0.043  Sum_probs=77.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc--ccccccC----CCCCeEEEEccCCCcchHHHhhcCC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL--QIFSKWT----RSDRLRLFQADLQVEGSFDKAVMGC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~   80 (348)
                      +|+++||.|+|+ |.+|+.++..|+..|. +|+++++++.+.  ....+..    .....++...  .|    .++++++
T Consensus         2 ~m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d----~~a~~~a   74 (321)
T 3p7m_A            2 AMARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--ND----YKDLENS   74 (321)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC----GGGGTTC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CC----HHHHCCC
Confidence            355689999995 9999999999999888 999999987643  1111110    0012222211  12    2467899


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      |+||.+++......  .      .....+..|+...+.+.+.+.+..+...++.+|
T Consensus        75 DvVIi~ag~p~k~G--~------~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           75 DVVIVTAGVPRKPG--M------SRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             SEEEECCSCCCCTT--C------CHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CEEEEcCCcCCCCC--C------CHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            99999998643322  1      223678889999999999999887455666664

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.99  E-value=1.7e-05  Score=69.59  Aligned_cols=116  Identities=12%  Similarity=0.057  Sum_probs=77.1

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCC--Ccc--ccccccC----CCCCeEEEEccCCCcchHHHhh
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDP--GKL--QIFSKWT----RSDRLRLFQADLQVEGSFDKAV   77 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~--~~~--~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~   77 (348)
                      |+|+++||.|+|+ |.+|+.++..|+..|+ +|+++++++  .+.  ....+..    .....+....  .|    .+.+
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d----~~a~   76 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SD----YADT   76 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SC----GGGG
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CC----HHHh
Confidence            3344579999997 9999999999999999 999999983  221  1111100    0011122211  11    2457


Q ss_pred             cCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           78 MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        78 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      +++|+||.+++......  ..      ....+..|+...+.+.+.+.+.++...++.+|-
T Consensus        77 ~~aDvVIiaag~p~kpg--~~------R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           77 ADSDVVVITAGIARKPG--MS------RDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             TTCSEEEECCSCCCCTT--CC------HHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CCCCEEEEeCCCCCCCC--CC------HHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            89999999998643332  22      247889999999999999998874556666663

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.99  E-value=3.4e-05  Score=67.98  Aligned_cols=110  Identities=12%  Similarity=0.084  Sum_probs=70.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc--ccccccC---CCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL--QIFSKWT---RSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~--~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      +++||.|+|+ |.+|..++..|+..|.  +|.++|.+..+.  ....+..   ....+++..   .+    .++++++|+
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~~~aDv   77 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDVKDCDV   77 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHhCCCCE
Confidence            3578999998 9999999999999887  999999976543  1111111   111232221   12    345789999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEe
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT  135 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~  135 (348)
                      ||.+++......  ..     . .+.+..|+.....+.+.+.+..+...+|.+
T Consensus        78 Vii~~g~p~k~g--~~-----r-~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           78 IVVTAGANRKPG--ET-----R-LDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             EEECCCC--------C-----H-HHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             EEEcCCCCCCCC--cC-----H-HHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            999998643222  11     2 367888999999999999987644555553

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.95  E-value=4.2e-05  Score=66.94  Aligned_cols=114  Identities=17%  Similarity=0.040  Sum_probs=74.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHC-C--CeEEEEEcCCCc-cccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLER-G--YIVHATVRDPGK-LQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~-g--~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |||.|+||+|.+|..++..|..+ +  .++.++++.+.. .....+.......+..... .  ....+.++++|+||-+|
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~-~--~~~~~~~~~aDivii~a   77 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFS-G--EDATPALEGADVVLISA   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEEC-S--SCCHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEec-C--CCcHHHhCCCCEEEEeC
Confidence            58999999999999999998775 4  589999987621 1111111111122222110 0  11245678999999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      +......  .      .+.+.++.|+...+.+.+.+.+..+...++.+|
T Consensus        78 g~~rkpG--~------~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           78 GVARKPG--M------DRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             SCSCCTT--C------CHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            8643322  1      224788999999999999998887455666665

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.94  E-value=3.1e-06  Score=70.13  Aligned_cols=72  Identities=18%  Similarity=0.190  Sum_probs=49.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |+|+|+||+|++|+++++.|++.|++|++++|++.+. .+......  .+.  ..|+. ..++.++++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~--~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR--IAG--DASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH--HHS--SCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc--ccc--cCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            4799999999999999999999999999999976543 22211000  000  01222 2346666778999999875

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.93  E-value=2e-05  Score=70.12  Aligned_cols=97  Identities=15%  Similarity=0.132  Sum_probs=59.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCC-----C-eEEEEEcCCCcc-ccccccCCC---CCeEEEEccCCCcchHHHhhc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERG-----Y-IVHATVRDPGKL-QIFSKWTRS---DRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g-----~-~V~~~~r~~~~~-~~~~~~~~~---~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      |+|+||+|.||||++|+.|++.|.+++     + +|+.+.+..+.. .+.......   ..+.+.  |+ +.    +.+.
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~--~~-~~----~~~~   79 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE--PT-EA----AVLG   79 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCE--EC-CH----HHHT
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeec--cC-CH----HHhc
Confidence            346799999999999999999999877     3 777776433211 111111100   112221  22 22    2345


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      ++|+||.+.+...                        +..++..+ +.|  .++|-+|+..
T Consensus        80 ~~DvVf~alg~~~------------------------s~~~~~~~-~~G--~~vIDlSa~~  113 (352)
T 2nqt_A           80 GHDAVFLALPHGH------------------------SAVLAQQL-SPE--TLIIDCGADF  113 (352)
T ss_dssp             TCSEEEECCTTSC------------------------CHHHHHHS-CTT--SEEEECSSTT
T ss_pred             CCCEEEECCCCcc------------------------hHHHHHHH-hCC--CEEEEECCCc
Confidence            8999999876431                        22466666 666  5799999875

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.92  E-value=2.6e-05  Score=67.68  Aligned_cols=111  Identities=9%  Similarity=0.001  Sum_probs=76.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCccc-----cccccC-CCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKLQ-----IFSKWT-RSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~-----~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      |||.|+|+ |.+|+.++..|+..|+  +|.++++++.+..     +..... .....++...  .|    .++++++|+|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDiV   73 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCCCEE
Confidence            58999999 9999999999999998  9999999775431     111100 1112222222  12    4567899999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      |.+++......  .      .....+..|+.-.+.+.+.+.+.++...++.+|-
T Consensus        74 Viaag~~~kpG--~------~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           74 VVTAGLARKPG--M------TRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EECCCCCCCSS--C------CHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EECCCCCCCCC--C------cHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            99998643322  1      2237788999999999999999875566666663

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.90  E-value=1.2e-05  Score=71.25  Aligned_cols=113  Identities=15%  Similarity=0.068  Sum_probs=72.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-c-cccccC----CCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-Q-IFSKWT----RSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~-~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      ++|||.|+|| |.+|+.++..|+..|+ +|.++++++.+. . ...+..    .....++..     ..++.++++++|+
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~~ea~~~aDi   81 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAALTGADC   81 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHHHTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-----eCCHHHHhCCCCE
Confidence            3579999998 9999999999999998 999999987544 2 111100    000111111     1345557889999


Q ss_pred             EEEccccCccccccc---cccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEE
Q 035965           83 VFHVAASMEFDINVK---DNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL  134 (348)
Q Consensus        83 Vih~a~~~~~~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  134 (348)
                      ||-+++.........   .     . ......|+...+.+.+.+.+..+...+|.
T Consensus        82 Vi~a~g~p~~~g~~~~~~~-----r-~dl~~~n~~i~~~i~~~i~~~~p~a~vi~  130 (331)
T 1pzg_A           82 VIVTAGLTKVPGKPDSEWS-----R-NDLLPFNSKIIREIGQNIKKYCPKTFIIV  130 (331)
T ss_dssp             EEECCSCSSCTTCCGGGCC-----G-GGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             EEEccCCCCCCCcccCCCC-----H-HHHHHHHHHHHHHHHHHHHHHCCCcEEEE
Confidence            999997543222100   1     1 25677788888899998888763334443

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.87  E-value=5.9e-05  Score=66.60  Aligned_cols=113  Identities=10%  Similarity=0.087  Sum_probs=75.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-----ccccccCCCCCeEEEEccCCCcchHHHhhcCC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-----QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGC   80 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   80 (348)
                      ..+++||.|+|| |.+|+.++..|+..+.  +|.+++++..+.     .+.........+++.. |  +    .++++++
T Consensus         6 ~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~a   77 (326)
T 2zqz_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDA   77 (326)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGC
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCC
Confidence            344579999998 9999999999988775  899999865433     1111110112333332 2  2    3457899


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      |+||.+++......  ..      ....+..|+...+.+.+.+.+..+..++|.+|
T Consensus        78 DvVii~ag~~~k~g--~~------R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           78 DLVVITAGAPQKPG--ET------RLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             SEEEECCCCC-------C------HHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             CEEEEcCCCCCCCC--CC------HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            99999998643322  11      23678889999999999998887556666653

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.86  E-value=1e-05  Score=68.14  Aligned_cols=71  Identities=13%  Similarity=0.099  Sum_probs=58.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a~   88 (348)
                      .++|+|+|+ |.+|+.+++.|.+.|+ |+++++++.......     .++.++.+|.+|++.+.++ ++++|.||-+.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----SGANFVHGDPTRVSDLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence            468999997 9999999999999999 999998876442111     2688999999999988876 789999997753

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.86  E-value=8.7e-05  Score=65.29  Aligned_cols=110  Identities=10%  Similarity=0.085  Sum_probs=72.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-----ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-----QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      .+||.|+|| |.+|+.++..|+..+.  +|.+++++..+.     .+.........+++.. |  +    .++++++|+|
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvV   76 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLV   76 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEE
Confidence            369999998 9999999999998876  899999865433     1111111112333332 2  2    3457899999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      |.+++......  .      .....+..|+...+.+.+.+.+.++..++|.+|
T Consensus        77 ii~ag~~~~~g--~------~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           77 VITAGAPQKPG--E------SRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             EECCCC------------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EECCCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            99998643322  1      123678889999999999999887556666653

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.86  E-value=8.3e-05  Score=65.55  Aligned_cols=114  Identities=10%  Similarity=0.065  Sum_probs=77.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-----ccccccCCCCCeEEEEccCCCcchHHHhhcCCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-----QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   81 (348)
                      ..++||.|+|+ |.+|+.++..|+.+|.  +|++++++..+.     .+............+..  .|.    +.++++|
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~----~~~~~aD   89 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDY----SVTANSK   89 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSG----GGGTTEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCH----HHhCCCC
Confidence            45679999997 9999999999999987  899999876433     12211100111122222  122    2478999


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      +||.+||......  .      ...+.++.|+.-.+.+.+.+.+..+..+++.+|-
T Consensus        90 iVvi~aG~~~kpG--~------tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           90 LVIITAGARQQEG--E------SRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             EEEECCSCCCCTT--C------CGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEEccCCCCCCC--c------cHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999998643322  2      2247899999999999999998875556666663

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.82  E-value=7.9e-05  Score=65.28  Aligned_cols=111  Identities=9%  Similarity=0.036  Sum_probs=73.9

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc--c---cccc-cCCCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL--Q---IFSK-WTRSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~--~---~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      |||.|+|+ |.+|+.++..|+..|.  +|+++++++.+.  .   +... .......+....|  +    .+.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            58999997 9999999999998886  999999987643  1   1110 0001123332221  1    2457799999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      |.+|+......  .      .+...+..|+.-.+.+.+.+.+.++...++.+|-
T Consensus        74 ii~ag~~~kpG--~------~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           74 IITAGLPRSPG--M------SRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             EECCCC---------------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             EECCCCCCCCC--C------CHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            99998643322  1      2247889999999999999998875556666553

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.82  E-value=2.3e-05  Score=68.60  Aligned_cols=81  Identities=11%  Similarity=0.037  Sum_probs=58.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcC---CCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRD---PGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~---~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      ...+++++|+|+ |.+|+.++..|.+.|. +|++++|+   ..+. .+...........+...++.+.+++.+.+.++|+
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi  229 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI  229 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence            456789999997 8999999999999998 89999998   3333 2211110001234445667776777788889999


Q ss_pred             EEEcccc
Q 035965           83 VFHVAAS   89 (348)
Q Consensus        83 Vih~a~~   89 (348)
                      ||++...
T Consensus       230 IINaTp~  236 (315)
T 3tnl_A          230 FTNATGV  236 (315)
T ss_dssp             EEECSST
T ss_pred             EEECccC
Confidence            9998764

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.80  E-value=1.7e-05  Score=70.35  Aligned_cols=177  Identities=13%  Similarity=0.038  Sum_probs=104.1

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCC-------eEEEEEcCCCcc-------ccccccCCCCCeEEEEccCCCcch
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGY-------IVHATVRDPGKL-------QIFSKWTRSDRLRLFQADLQVEGS   72 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~-------~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~Dl~d~~~   72 (348)
                      .+|...||.|+||+|.||..|+..|.....       ++.+++..+...       ++..... ......+.+     .+
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~-~~~~~~~~~-----~~   93 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAF-PLLDKVVVT-----AD   93 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTC-TTEEEEEEE-----SC
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCc-cCCCcEEEc-----CC
Confidence            344556999999999999999988877532       678888754311       1111110 011122222     12


Q ss_pred             HHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC-CcceEEEeccceeeeecCCCCCCC
Q 035965           73 FDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE-SVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        73 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                      ..++++++|+||-+||....+.  .      .+.+.++.|+.-.+.+.+.+.+.. +..+++.+|--.-.  ...     
T Consensus        94 ~~~a~~~advVvi~aG~prkpG--m------tR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~--~~~-----  158 (345)
T 4h7p_A           94 PRVAFDGVAIAIMCGAFPRKAG--M------ERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANT--NAL-----  158 (345)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTT--C------CHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH--HHH-----
T ss_pred             hHHHhCCCCEEEECCCCCCCCC--C------CHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcch--HHH-----
Confidence            4567899999999999754333  2      224889999999999999988764 23455555531100  000     


Q ss_pred             CcccCC-CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC
Q 035965          152 PVVDES-CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS  213 (348)
Q Consensus       152 ~~~~E~-~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~  213 (348)
                      ...... ...         .+...-+.+-+..-++-...++..+++...++-..|.|......
T Consensus       159 i~~~~~~g~~---------~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~t~  212 (345)
T 4h7p_A          159 ILLKSAQGKL---------NPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSSTQ  212 (345)
T ss_dssp             HHHHHTTTCS---------CGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSSTTC
T ss_pred             HHHHHccCCC---------CcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCCeE
Confidence            000000 000         13344556666666666666777788777777777888765543

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.80  E-value=2.1e-05  Score=69.68  Aligned_cols=73  Identities=14%  Similarity=0.091  Sum_probs=52.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh---h--cCCCEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA---V--MGCDGV   83 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~--~~~d~V   83 (348)
                      .+++|||+||+|.||..+++.+...|.+|+++++++.+. ....+     +.. ...|..+.+....+   .  .++|+|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~-----g~~-~~~~~~~~~~~~~~~~~~~~~~~D~v  213 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-----GAW-QVINYREEDLVERLKEITGGKKVRVV  213 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-----TCS-EEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-----CCC-EEEECCCccHHHHHHHHhCCCCceEE
Confidence            357999999999999999999999999999999976544 22221     122 22466554433332   2  258999


Q ss_pred             EEccc
Q 035965           84 FHVAA   88 (348)
Q Consensus        84 ih~a~   88 (348)
                      |++++
T Consensus       214 i~~~g  218 (327)
T 1qor_A          214 YDSVG  218 (327)
T ss_dssp             EECSC
T ss_pred             EECCc
Confidence            99998

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.79  E-value=2.1e-05  Score=70.89  Aligned_cols=76  Identities=17%  Similarity=0.121  Sum_probs=58.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ..+++|+|+|+ |-||..+++.|...|++|++++|++.+. ......    +.. +.+|..+.+++.++++++|+||+++
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~----g~~-~~~~~~~~~~l~~~~~~~DvVi~~~  237 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF----GGR-VITLTATEANIKKSVQHADLLIGAV  237 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----TTS-EEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc----Cce-EEEecCCHHHHHHHHhCCCEEEECC
Confidence            45689999999 9999999999999999999999987644 222111    111 4566777778888888999999998


Q ss_pred             ccC
Q 035965           88 ASM   90 (348)
Q Consensus        88 ~~~   90 (348)
                      +..
T Consensus       238 g~~  240 (369)
T 2eez_A          238 LVP  240 (369)
T ss_dssp             C--
T ss_pred             CCC
Confidence            853

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.78  E-value=6.1e-05  Score=68.76  Aligned_cols=72  Identities=15%  Similarity=0.233  Sum_probs=60.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a~   88 (348)
                      .++|+|.|. |-+|..+++.|.+.|++|+++++++... ....     .++.++.+|.++++.+.++ ++++|+||-+..
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-----~g~~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-----FGMKVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-----TTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-----CCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            468999997 9999999999999999999999988755 2222     2678899999999999887 778999987754

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.78  E-value=0.00013  Score=64.29  Aligned_cols=112  Identities=12%  Similarity=0.084  Sum_probs=74.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc-----ccccccCCC-CCeEEEEccCCCcchHHHhhcCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL-----QIFSKWTRS-DRLRLFQADLQVEGSFDKAVMGC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~-----~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~   80 (348)
                      |+++||.|+|| |.+|..++..|+.+|  .+|.++++++.+.     .+....... ..+++.. |  +    .++++++
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~a   75 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDA   75 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCC
Confidence            34579999998 999999999999888  4899999875322     111111011 2333332 2  2    3457899


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      |+||.+++......  ..      ....+..|+.....+.+.+.+..+..++|.+|
T Consensus        76 DvVvi~ag~~~~~g--~~------r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           76 DLVVICAGAAQKPG--ET------RLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             SEEEECCCCCCCTT--CC------HHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CEEEECCCCCCCCC--Cc------HHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            99999998643322  11      23667889999999999998887455555543

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.77  E-value=9.8e-05  Score=63.92  Aligned_cols=111  Identities=9%  Similarity=0.008  Sum_probs=74.2

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc-----ccccccC-CCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL-----QIFSKWT-RSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~-----~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      |||.|+|| |.||+.++..|+.++  .++.++|..+.+.     ++..... ..........  .|.    +.++++|+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~----~~~~~aDvV   73 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLLKGSEII   73 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCH----HHhCCCCEE
Confidence            68999995 999999999998876  4899999865322     1211100 0111222221  122    246799999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      |-.||....+.  .      .+.+.++.|+.-.+.+.+.+.+.++...++.+|-
T Consensus        74 vitAG~prkpG--m------tR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           74 VVTAGLARKPG--M------TRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EECCCCCCCSS--S------CHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEecCCCCCCC--C------chHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence            99999654433  2      2248899999999999999999884555555543

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.75  E-value=4.6e-05  Score=68.11  Aligned_cols=74  Identities=27%  Similarity=0.346  Sum_probs=53.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-----CCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-----GCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~Vi   84 (348)
                      .+++|||+||+|.||..+++.+...|.+|++++|++.+.......    +.. ...|+.+.+++.+.++     ++|+||
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~----g~~-~~~d~~~~~~~~~~~~~~~~~~~D~vi  243 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI----GGE-VFIDFTKEKDIVGAVLKATDGGAHGVI  243 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT----TCC-EEEETTTCSCHHHHHHHHHTSCEEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc----CCc-eEEecCccHhHHHHHHHHhCCCCCEEE
Confidence            357899999999999999999999999999999987654222111    222 2347665444444332     689999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      ++++
T Consensus       244 ~~~g  247 (347)
T 2hcy_A          244 NVSV  247 (347)
T ss_dssp             ECSS
T ss_pred             ECCC
Confidence            9987

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.74  E-value=0.00023  Score=62.47  Aligned_cols=111  Identities=12%  Similarity=0.043  Sum_probs=75.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-----ccccccCCCCCeEEE-EccCCCcchHHHhhcCCCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-----QIFSKWTRSDRLRLF-QADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-----~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~d~   82 (348)
                      .+||.|+|+ |.+|+.++..|+..|.  +|++++++..+.     .+............. ..|..       .++++|+
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~-------~~~daDi   92 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS-------VSAGSKL   92 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC-------SCSSCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH-------HhCCCCE
Confidence            579999998 9999999999999986  999999876433     111110001112222 23322       2678999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      ||-+||......  ..      +.+.+..|+.-.+.+.+.+.+.++...++.+|-
T Consensus        93 VIitaG~p~kpG--~t------R~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           93 VVITAGARQQEG--ES------RLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             EEECCSCCCCSS--CC------TTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEeCCCCCCCC--CC------HHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            999998754332  22      237888999999999999998875556666653

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.72  E-value=0.00017  Score=63.97  Aligned_cols=93  Identities=19%  Similarity=0.140  Sum_probs=55.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC---eEEEEE-cCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY---IVHATV-RDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~---~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ++||+|.||+|.+|+.|++.|.++++   +++++. ++....... .    .+.+....|+ +++.    ++++|+||-+
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-~----~g~~i~~~~~-~~~~----~~~~DvV~~a   75 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-F----AESSLRVGDV-DSFD----FSSVGLAFFA   75 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-E----TTEEEECEEG-GGCC----GGGCSEEEEC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-c----CCcceEEecC-CHHH----hcCCCEEEEc
Confidence            46899999999999999999997765   445554 222111110 1    1112111222 2222    4579999988


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      .+..                        .+..++..+.+.| + ++|.+|+..
T Consensus        76 ~g~~------------------------~s~~~a~~~~~aG-~-kvId~Sa~~  102 (340)
T 2hjs_A           76 AAAE------------------------VSRAHAERARAAG-C-SVIDLSGAL  102 (340)
T ss_dssp             SCHH------------------------HHHHHHHHHHHTT-C-EEEETTCTT
T ss_pred             CCcH------------------------HHHHHHHHHHHCC-C-EEEEeCCCC
Confidence            7621                        1335666666677 4 588888864

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.70  E-value=0.00017  Score=63.17  Aligned_cols=109  Identities=16%  Similarity=0.132  Sum_probs=67.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-c-cccccC---CCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-Q-IFSKWT---RSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-~-~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      |||.|+|| |.+|+.++..|+..|+  +|.++++++.+. . ...+..   .....++..   .+    .+.++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~----~~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GG----HSELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---EC----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CC----HHHhCCCCEEE
Confidence            58999998 9999999999999999  999999976432 1 111110   011223222   12    23578999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      .+++......  .      ...+.+..|+...+.+++.+.+..+...+|.+|
T Consensus        73 i~~~~~~~~g--~------~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           73 LTAGANQKPG--E------SRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             ECC--------------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             EcCCCCCCCC--C------cHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9997533222  1      113667888998999999888876344555543

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.70  E-value=4.1e-05  Score=68.05  Aligned_cols=74  Identities=19%  Similarity=0.233  Sum_probs=52.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhh-----cCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAV-----MGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~d~Vi   84 (348)
                      .+++|+||||+|.||..+++.+...|.+|+++++++.+....+..    +.. ...|..+.+++.+.+     .++|+||
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~----g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi  219 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI----GFD-AAFNYKTVNSLEEALKKASPDGYDCYF  219 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCS-EEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCc-EEEecCCHHHHHHHHHHHhCCCCeEEE
Confidence            367899999999999999999999999999999876544221211    122 234766633333332     2589999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      ++++
T Consensus       220 ~~~g  223 (333)
T 1v3u_A          220 DNVG  223 (333)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9998

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.69  E-value=0.00019  Score=63.09  Aligned_cols=110  Identities=13%  Similarity=0.133  Sum_probs=71.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCccc--ccccc---C-CCCCeEEEEccCCCcchHHHhhcCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKLQ--IFSKW---T-RSDRLRLFQADLQVEGSFDKAVMGCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~---~-~~~~~~~~~~Dl~d~~~~~~~~~~~d   81 (348)
                      +++||.|+|+ |.+|+.++..|+..|.  +|+++++++.+..  ...+.   . ....+++.. |  +    .++++++|
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aD   76 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDAD   76 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCC
Confidence            3579999998 9999999999988774  8999999764221  11111   0 111333332 1  2    24578999


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEe
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT  135 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~  135 (348)
                      +||-+++......  ..     . ...+..|+.-...+++.+.+..+...++.+
T Consensus        77 vViia~~~~~~~g--~~-----r-~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~  122 (316)
T 1ldn_A           77 LVVICAGANQKPG--ET-----R-LDLVDKNIAIFRSIVESVMASGFQGLFLVA  122 (316)
T ss_dssp             EEEECCSCCCCTT--TC-----S-GGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             EEEEcCCCCCCCC--CC-----H-HHHHHcChHHHHHHHHHHHHHCCCCEEEEe
Confidence            9999998654332  11     1 256778888888899888887633444444

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.66  E-value=9.9e-05  Score=65.69  Aligned_cols=97  Identities=14%  Similarity=0.047  Sum_probs=58.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |+||.|.||+|.+|+.+++.|.+... +++++.+..+.. .+........+..  ...+.+.+   + +.++|+||.+.+
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~--~~~~~~~~---~-~~~vDvV~~a~g   77 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRT--NLKFVPPE---K-LEPADILVLALP   77 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTC--CCBCBCGG---G-CCCCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcc--cccccchh---H-hcCCCEEEEcCC
Confidence            57999999999999999999987654 877776643322 2221111000100  01122222   2 468999999876


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      ...                        +..+...+.+.|  .++|-+|+..
T Consensus        78 ~~~------------------------s~~~a~~~~~aG--~~VId~Sa~~  102 (345)
T 2ozp_A           78 HGV------------------------FAREFDRYSALA--PVLVDLSADF  102 (345)
T ss_dssp             TTH------------------------HHHTHHHHHTTC--SEEEECSSTT
T ss_pred             cHH------------------------HHHHHHHHHHCC--CEEEEcCccc
Confidence            321                        234555556667  4688888853

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.66  E-value=2.9e-05  Score=72.02  Aligned_cols=71  Identities=20%  Similarity=0.324  Sum_probs=58.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~   86 (348)
                      .|||+|.|+ |-+|++|++.|.++||+|+++++++... .+....    ++..+.||-++++.+.++ ++++|.+|-+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~   75 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY----DLRVVNGHASHPDVLHEAGAQDADMLVAV   75 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----SCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----CcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence            368999997 9999999999999999999999987655 333221    578899999999999886 6789998844

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.65  E-value=5.1e-05  Score=66.93  Aligned_cols=116  Identities=9%  Similarity=0.090  Sum_probs=71.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccc--cccccC----CCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQ--IFSKWT----RSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~--~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      ++||.|+|| |.+|+.++..|+..|+ +|.++++++.+..  ...+..    .....++...  .   ++ ++++++|+|
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~---d~-~al~~aD~V   76 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--N---TY-DDLAGADVV   76 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--C---CG-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--C---CH-HHhCCCCEE
Confidence            468999998 9999999999999998 9999998775431  111100    0011122210  1   23 457899999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      |-+++....... .  .+++........|+.-.+.+.+.+.+..+...+|.+|
T Consensus        77 i~a~g~p~k~g~-~--~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           77 IVTAGFTKAPGK-S--DKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             EECCSCSSCTTC-C--STTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEeCCCCCCCCC-C--cccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999975322110 0  0000123567778888888888888776344555543

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.63  E-value=0.00023  Score=60.89  Aligned_cols=73  Identities=12%  Similarity=0.174  Sum_probs=46.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEE-EcCCCcc---ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER-GYIVHAT-VRDPGKL---QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~-~r~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      |+|+||.|+|++|.+|+.+++.+.+. ++++.++ +|+.+..   ......    +...   ++.-.+++.++++++|+|
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~----g~~~---gv~v~~dl~~ll~~~DVV   77 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFL----GKQT---GVALTDDIERVCAEADYL   77 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTT----TCCC---SCBCBCCHHHHHHHCSEE
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHh----CCCC---CceecCCHHHHhcCCCEE
Confidence            56789999999999999999999875 6787764 5553321   111111    1110   222234566666678999


Q ss_pred             EEccc
Q 035965           84 FHVAA   88 (348)
Q Consensus        84 ih~a~   88 (348)
                      |++..
T Consensus        78 IDfT~   82 (272)
T 4f3y_A           78 IDFTL   82 (272)
T ss_dssp             EECSC
T ss_pred             EEcCC
Confidence            99863

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.62  E-value=4.6e-05  Score=67.39  Aligned_cols=110  Identities=15%  Similarity=0.046  Sum_probs=70.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccc--cccccC------CCCCeEEEEccCCCcchHHHhhcCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQ--IFSKWT------RSDRLRLFQADLQVEGSFDKAVMGC   80 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~--~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~   80 (348)
                      +++||.|+|| |.+|+.++..|+..|+ +|.++++++.+..  ...+..      ...++.. ..|      + ++++++
T Consensus        13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d------~-~al~~a   83 (328)
T 2hjr_A           13 MRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-ENN------Y-EYLQNS   83 (328)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESC------G-GGGTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CCC------H-HHHCCC
Confidence            3468999998 9999999999999998 9999999875431  111100      0112221 122      3 457899


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      |+||-+++......  ..     . ......|+.-.+.+.+.+.+..+...+|.+|
T Consensus        84 D~VI~avg~p~k~g--~t-----r-~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           84 DVVIITAGVPRKPN--MT-----R-SDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             SEEEECCSCCCCTT--CC-----S-GGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CEEEEcCCCCCCCC--Cc-----h-hhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999997533211  11     1 2556778888888888888765344555443

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.59  E-value=7.1e-05  Score=66.76  Aligned_cols=74  Identities=15%  Similarity=0.057  Sum_probs=51.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcc---hHHHhh--cCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG---SFDKAV--MGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~--~~~d~Vi   84 (348)
                      .+++|||+||+|.+|..+++.+...|.+|+++++++.+.......    +... ..|..+.+   .+.+..  .++|+||
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi  240 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL----GADE-TVNYTHPDWPKEVRRLTGGKGADKVV  240 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCSE-EEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCCE-EEcCCcccHHHHHHHHhCCCCceEEE
Confidence            357899999999999999999999999999999976654222211    1221 24655543   233333  2689999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      ++++
T Consensus       241 ~~~g  244 (343)
T 2eih_A          241 DHTG  244 (343)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9998

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.59  E-value=0.00029  Score=61.72  Aligned_cols=109  Identities=13%  Similarity=0.085  Sum_probs=74.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCccc--cccccC---CCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQ--IFSKWT---RSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      |||.|+|| |.+|+.++..|+..+  .+|.+++++..+..  ...+..   ....+++.. +  +    .++++++|+||
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~Vi   72 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAVV   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            58999998 999999999999886  68999998754331  111110   012334332 2  2    34578999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      .+++......  ..      ....+..|+...+.+.+.+.+.++..++|.+|
T Consensus        73 i~ag~~~~~g--~~------r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           73 LAAGVAQRPG--ET------RLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             ECCCCCCCTT--CC------HHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ECCCCCCCCC--cC------HHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            9998643322  11      23678889999999999998887556666653

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.55  E-value=0.00033  Score=62.59  Aligned_cols=35  Identities=23%  Similarity=0.327  Sum_probs=29.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRD   44 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~   44 (348)
                      |++||.|.||+|.+|+.+++.|.+.. .+|+++.++
T Consensus         7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A            7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            45799999999999999999998764 588888754

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.55  E-value=6.3e-05  Score=66.04  Aligned_cols=110  Identities=12%  Similarity=0.033  Sum_probs=70.9

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCCCcc-ccc-cccCC----CCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDPGKL-QIF-SKWTR----SDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~~~~-~~~-~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      |||.|+|+ |.+|+.++..|+..  |++|+++++++.+. ... .+...    ....++...  +|   ..+ ++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~~~-l~~aDvV   73 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND---YAD-TANSDIV   73 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC---GGG-GTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CC---HHH-HCCCCEE
Confidence            48999998 99999999999985  79999999987644 111 01000    011121111  22   223 6789999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      |-+++......  .      .....+..|+.....+.+.+.+..+..++|.+|
T Consensus        74 iiav~~p~~~g--~------~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           74 IITAGLPRKPG--M------TREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EECCSCCCCTT--C------CHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEeCCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            99997532211  1      123667788888889999888776445566553

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.54  E-value=0.00012  Score=60.64  Aligned_cols=65  Identities=18%  Similarity=0.309  Sum_probs=48.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ++|+|.|+| +|.+|+.+++.|.+.|++|++++|++.+. .+..     .++...        ++.++++++|+||.+..
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----~g~~~~--------~~~~~~~~~DvVi~av~   92 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFP-----SAAQVT--------FQEEAVSSPEVIFVAVF   92 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSB-----TTSEEE--------EHHHHTTSCSEEEECSC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----cCCcee--------cHHHHHhCCCEEEECCC
Confidence            457899999 79999999999999999999999986544 2221     133321        35566788999998865

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.54  E-value=0.00027  Score=61.42  Aligned_cols=37  Identities=27%  Similarity=0.352  Sum_probs=31.7

Q ss_pred             CCCe-EEEe-CCC-----------------ChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           10 RSKT-FCVT-GAN-----------------GYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        10 ~~~~-ilVt-Gat-----------------GfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .+++ |||| |+|                 |-.|.+++++++++|++|+.+.+..+
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            4566 9999 666                 99999999999999999999998543

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.53  E-value=0.0001  Score=65.86  Aligned_cols=99  Identities=19%  Similarity=0.201  Sum_probs=58.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      +++||.|.||+|.+|+.+++.|.+.. .+++++.+..+.. .+........+..  ..|+.-.+  .+.++++|+||.+.
T Consensus        15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v--~~dl~~~~--~~~~~~vDvVf~at   90 (359)
T 1xyg_A           15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK--LPTLVSVK--DADFSTVDAVFCCL   90 (359)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC--CCCCBCGG--GCCGGGCSEEEECC
T ss_pred             cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc--cccceecc--hhHhcCCCEEEEcC
Confidence            34689999999999999999998875 4887776543222 2211111000110  12332222  33446899999987


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      +...                        +......+ +.|  .++|-.|+..
T Consensus        91 p~~~------------------------s~~~a~~~-~aG--~~VId~sa~~  115 (359)
T 1xyg_A           91 PHGT------------------------TQEIIKEL-PTA--LKIVDLSADF  115 (359)
T ss_dssp             CTTT------------------------HHHHHHTS-CTT--CEEEECSSTT
T ss_pred             Cchh------------------------HHHHHHHH-hCC--CEEEECCccc
Confidence            6321                        22355555 556  4688888854

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.53  E-value=7.6e-05  Score=66.29  Aligned_cols=75  Identities=17%  Similarity=0.159  Sum_probs=52.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHH---Hhh--cCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFD---KAV--MGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~--~~~d~Vi   84 (348)
                      .+++|+|+||+|.||..+++.+...|++|++++|++.+.......    +.. ...|..+.+...   +..  .++|+||
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----g~~-~~~d~~~~~~~~~i~~~~~~~~~d~vi  219 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL----GCH-HTINYSTQDFAEVVREITGGKGVDVVY  219 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC-EEEECCCHHHHHHHHHHhCCCCCeEEE
Confidence            357899999999999999999999999999999986544221111    122 224655544332   322  2689999


Q ss_pred             Ecccc
Q 035965           85 HVAAS   89 (348)
Q Consensus        85 h~a~~   89 (348)
                      ++++.
T Consensus       220 ~~~g~  224 (333)
T 1wly_A          220 DSIGK  224 (333)
T ss_dssp             ECSCT
T ss_pred             ECCcH
Confidence            99983

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.52  E-value=9e-05  Score=63.76  Aligned_cols=74  Identities=14%  Similarity=0.152  Sum_probs=50.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      +.+++++|+|+ |.+|+.+++.|++.|.+|++++|+..+. .+.........+  ...|+   +++.+  .++|+||+++
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~--~~~~~---~~~~~--~~~DivVn~t  188 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSI--QALSM---DELEG--HEFDLIINAT  188 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSE--EECCS---GGGTT--CCCSEEEECC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCe--eEecH---HHhcc--CCCCEEEECC
Confidence            45789999998 7899999999999999999999987654 332211100112  12332   22222  5799999999


Q ss_pred             ccC
Q 035965           88 ASM   90 (348)
Q Consensus        88 ~~~   90 (348)
                      +..
T Consensus       189 ~~~  191 (271)
T 1nyt_A          189 SSG  191 (271)
T ss_dssp             SCG
T ss_pred             CCC
Confidence            864

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.51  E-value=9.8e-05  Score=66.09  Aligned_cols=74  Identities=19%  Similarity=0.125  Sum_probs=51.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHH---Hhhc--CCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFD---KAVM--GCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~~--~~d~Vi   84 (348)
                      .+++|+|+||+|.||..+++.+...|.+|+++++++.+....+..    +.. ...|..+.+...   +...  ++|+||
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~-~~~d~~~~~~~~~~~~~~~~~~~D~vi  244 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN----GAH-EVFNHREVNYIDKIKKYVGEKGIDIII  244 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCS-EEEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc----CCC-EEEeCCCchHHHHHHHHcCCCCcEEEE
Confidence            357899999999999999999999999999999976554222111    122 224555543332   2222  699999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      ++++
T Consensus       245 ~~~G  248 (351)
T 1yb5_A          245 EMLA  248 (351)
T ss_dssp             ESCH
T ss_pred             ECCC
Confidence            9987

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.50  E-value=7.9e-05  Score=66.51  Aligned_cols=74  Identities=19%  Similarity=0.257  Sum_probs=51.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcccccc-ccCCCCCeEEEEccCCCcchHHHhh-----cCCCEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFS-KWTRSDRLRLFQADLQVEGSFDKAV-----MGCDGV   83 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~d~V   83 (348)
                      .+++|||+||+|.||..+++.+...|.+|+++++++.+..... ..    +.. ...|..+.+++.+.+     .++|+|
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~----g~~-~~~d~~~~~~~~~~~~~~~~~~~d~v  229 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF----GFD-DAFNYKEESDLTAALKRCFPNGIDIY  229 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS----CCS-EEEETTSCSCSHHHHHHHCTTCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCc-eEEecCCHHHHHHHHHHHhCCCCcEE
Confidence            3578999999999999999999999999999999765542221 11    122 223555432222222     268999


Q ss_pred             EEccc
Q 035965           84 FHVAA   88 (348)
Q Consensus        84 ih~a~   88 (348)
                      |++++
T Consensus       230 i~~~g  234 (345)
T 2j3h_A          230 FENVG  234 (345)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99987

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.50  E-value=2.8e-05  Score=60.08  Aligned_cols=70  Identities=14%  Similarity=0.215  Sum_probs=51.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      .++|+|+|+ |.+|+.+++.|.+.|++|++++|++.+. .+....    +....     ..+++.++++++|+||.+.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~----~~~~~-----~~~~~~~~~~~~Divi~at~~   90 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY----EYEYV-----LINDIDSLIKNNDVIITATSS   90 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH----TCEEE-----ECSCHHHHHHTCSEEEECSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh----CCceE-----eecCHHHHhcCCCEEEEeCCC
Confidence            679999996 9999999999999999999999987655 322221    12221     223456677889999998765


Q ss_pred             C
Q 035965           90 M   90 (348)
Q Consensus        90 ~   90 (348)
                      .
T Consensus        91 ~   91 (144)
T 3oj0_A           91 K   91 (144)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.49  E-value=0.00038  Score=61.03  Aligned_cols=109  Identities=10%  Similarity=0.031  Sum_probs=69.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc-cccc-cc----CCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL-QIFS-KW----TRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~-~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      ||||.|+| +|.+|+.++..|++.|  ++|++++|++.+. .... ..    .....++....   |   . +.++++|+
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d---~-~~~~~aDv   72 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---D---W-AALADADV   72 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---C---G-GGGTTCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---C---H-HHhCCCCE
Confidence            36899999 6999999999999999  8999999976543 2111 00    00012333222   2   2 35678999


Q ss_pred             EEEccccCcc----ccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEe
Q 035965           83 VFHVAASMEF----DINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT  135 (348)
Q Consensus        83 Vih~a~~~~~----~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~  135 (348)
                      ||-+++....    ..  .      .....+..|+.....+++.+.+..+...+|.+
T Consensus        73 Viiav~~~~~~~~~~g--~------~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~  121 (309)
T 1hyh_A           73 VISTLGNIKLQQDNPT--G------DRFAELKFTSSMVQSVGTNLKESGFHGVLVVI  121 (309)
T ss_dssp             EEECCSCGGGTC---------------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             EEEecCCcccCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence            9999876432    11  1      11366778888888888888776533344443

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.48  E-value=9.2e-05  Score=65.26  Aligned_cols=112  Identities=13%  Similarity=0.051  Sum_probs=70.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cc-ccccC----CCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QI-FSKWT----RSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~-~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      ++||.|+|+ |.+|+.++..|+..|+ +|+++++++.+. .. ..+..    .....++...  .|   . ++++++|+|
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~a~~~aDiV   76 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT--DD---Y-ADISGSDVV   76 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-GGGTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhCCCCEE
Confidence            468999998 9999999999999998 999999987544 21 00000    0001111111  12   2 456789999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      |-+++......  ..     . .+.+..|....+.+++.+.+..+...+|.+|.
T Consensus        77 i~avg~p~~~g--~~-----r-~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           77 IITASIPGRPK--DD-----R-SELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             EECCCCSSCCS--SC-----G-GGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             EEeCCCCCCCC--Cc-----H-HHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            99998643322  11     1 24556677777888888877653344555554

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.47  E-value=0.00015  Score=64.52  Aligned_cols=71  Identities=13%  Similarity=0.080  Sum_probs=58.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a~   88 (348)
                      .++|+|.|+ |-+|+.+++.|.++|+ |+++++++.... ...    .++.++.+|.+|++.+.++ ++++|.|+-+.+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~----~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~  186 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR----SGANFVHGDPTRVSDLEKANVRGARAVIVDLE  186 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH----TTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh----CCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence            358999997 9999999999999999 999988776444 221    3789999999999999887 788999987653

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.46  E-value=0.00013  Score=67.48  Aligned_cols=78  Identities=24%  Similarity=0.298  Sum_probs=50.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC--CCCCeE-EE-----EccCCCcchHHHhhcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT--RSDRLR-LF-----QADLQVEGSFDKAVMGCD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~--~~~~~~-~~-----~~Dl~d~~~~~~~~~~~d   81 (348)
                      +|+|.|.|+ |++|..++..|++.|++|++++|++.+. .+.....  ..++++ .+     .+.+.-..++.++++++|
T Consensus         2 ~mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD   80 (450)
T 3gg2_A            2 SLDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD   80 (450)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence            368999996 9999999999999999999999987654 3222100  000100 00     011111234566778899


Q ss_pred             EEEEcccc
Q 035965           82 GVFHVAAS   89 (348)
Q Consensus        82 ~Vih~a~~   89 (348)
                      +||-+...
T Consensus        81 vViiaVpt   88 (450)
T 3gg2_A           81 IIFIAVGT   88 (450)
T ss_dssp             EEEECCCC
T ss_pred             EEEEEcCC
Confidence            99998764

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.46  E-value=0.00011  Score=65.73  Aligned_cols=75  Identities=13%  Similarity=0.079  Sum_probs=52.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHH---hh--cCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK---AV--MGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---~~--~~~d~Vi   84 (348)
                      .+++|+|+||+|.||..+++.+...|.+|+++++++.+....+..    +.. ...|..+.+....   ..  .++|+||
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi  236 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL----GAA-AGFNYKKEDFSEATLKFTKGAGVNLIL  236 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCc-EEEecCChHHHHHHHHHhcCCCceEEE
Confidence            357899999999999999999999999999999976554222211    122 2345555443332   22  2589999


Q ss_pred             Ecccc
Q 035965           85 HVAAS   89 (348)
Q Consensus        85 h~a~~   89 (348)
                      ++++.
T Consensus       237 ~~~G~  241 (354)
T 2j8z_A          237 DCIGG  241 (354)
T ss_dssp             ESSCG
T ss_pred             ECCCc
Confidence            99983

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.41  E-value=0.00057  Score=61.70  Aligned_cols=71  Identities=17%  Similarity=0.165  Sum_probs=55.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      .+.+++|+|.|+ |.+|+.+++.+.+.|++|++++..+.... ...     --+++..|..|.+.+.++++.+|+|.-
T Consensus         9 ~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~-~~~-----ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A            9 LKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC-RYV-----AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT-GGG-----SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh-hhh-----CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            345789999997 99999999999999999999987654321 100     124677999999999998888998754

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.41  E-value=0.00015  Score=65.10  Aligned_cols=72  Identities=21%  Similarity=0.163  Sum_probs=50.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHH---hhc-CCCEEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDK---AVM-GCDGVFH   85 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~---~~~-~~d~Vih   85 (348)
                      ++|||+||+|.||..+++.+...|. +|+++++++.+. ......    +.. ...|..+.+....   ... ++|+||+
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~----g~~-~~~d~~~~~~~~~~~~~~~~~~d~vi~  236 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL----GFD-AAINYKKDNVAEQLRESCPAGVDVYFD  236 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS----CCS-EEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc----CCc-eEEecCchHHHHHHHHhcCCCCCEEEE
Confidence            7999999999999999999999999 999999976544 222101    122 2346655432222   222 5899999


Q ss_pred             ccc
Q 035965           86 VAA   88 (348)
Q Consensus        86 ~a~   88 (348)
                      +++
T Consensus       237 ~~G  239 (357)
T 2zb4_A          237 NVG  239 (357)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            998

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.40  E-value=0.00017  Score=64.12  Aligned_cols=74  Identities=19%  Similarity=0.182  Sum_probs=51.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccc-cccCCCCCeEEEEccCCCcchHHHhh----cCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIF-SKWTRSDRLRLFQADLQVEGSFDKAV----MGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~----~~~d~Vi   84 (348)
                      .+++|||+||+|-||..+++.+...|.+|+++++++.+.... +..    +.. ...|..+.+....+.    .++|+||
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL----GFD-GAIDYKNEDLAAGLKRECPKGIDVFF  223 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT----CCS-EEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCC-EEEECCCHHHHHHHHHhcCCCceEEE
Confidence            367999999999999999999999999999999987655222 211    222 224555543332222    2599999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      ++++
T Consensus       224 ~~~g  227 (336)
T 4b7c_A          224 DNVG  227 (336)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9987

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.38  E-value=0.00094  Score=58.77  Aligned_cols=103  Identities=13%  Similarity=0.107  Sum_probs=66.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCccc-----cccccCCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKLQ-----IFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      ++|||.|+|+ |.+|+.++..|+..|+  +|++++|+..+..     +...........+...  .+.    +.++++|+
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~aD~   78 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDADM   78 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCCCCE
Confidence            4579999998 9999999999999999  9999999753321     1110000012222221  122    34678999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE  127 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~  127 (348)
                      ||-+++......  ..     . ...+..|+.....+++.+.+.+
T Consensus        79 Vii~v~~~~~~g--~~-----r-~~~~~~n~~~~~~~~~~i~~~~  115 (319)
T 1lld_A           79 VVITAGPRQKPG--QS-----R-LELVGATVNILKAIMPNLVKVA  115 (319)
T ss_dssp             EEECCCCCCCTT--CC-----H-HHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEECCCCCCCCC--CC-----H-HHHHHHHHHHHHHHHHHHHHhC
Confidence            999987543221  11     2 3667778888888888887655

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.37  E-value=0.00026  Score=63.60  Aligned_cols=73  Identities=18%  Similarity=0.180  Sum_probs=49.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcch---HHHhh-cCCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGS---FDKAV-MGCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~-~~~d~Vih~   86 (348)
                      +++|||+||+|.+|..+++.+...|.+|+++++++.+....+..    +... ..|..+.+.   +.+.. .++|+||++
T Consensus       164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~~-~~~~~~~~~~~~~~~~~~~g~D~vid~  238 (362)
T 2c0c_A          164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSL----GCDR-PINYKTEPVGTVLKQEYPEGVDVVYES  238 (362)
T ss_dssp             TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCSE-EEETTTSCHHHHHHHHCTTCEEEEEEC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc----CCcE-EEecCChhHHHHHHHhcCCCCCEEEEC
Confidence            57999999999999999999999999999999976544222111    2221 124333221   22222 268999999


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      ++
T Consensus       239 ~g  240 (362)
T 2c0c_A          239 VG  240 (362)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.37  E-value=0.001  Score=58.01  Aligned_cols=109  Identities=12%  Similarity=0.075  Sum_probs=71.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-cccccc-CCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-QIFSKW-TRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ++||.|+|| |.+|+.++..|+..|.  +|.++++++... ....+. ...+++.. ..   |   + +.++++|+||-+
T Consensus        14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~-t~---d---~-~~l~~aD~Vi~a   84 (303)
T 2i6t_A           14 VNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEI-SK---D---L-SASAHSKVVIFT   84 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEE-ES---C---G-GGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE-eC---C---H-HHHCCCCEEEEc
Confidence            578999996 9999999999999998  999999976311 111111 01123333 12   2   2 457899999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      ++...+   ...      ....+..|+.-.+.+++.+.+..+...+|.+|-
T Consensus        85 ag~~~p---G~t------R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN  126 (303)
T 2i6t_A           85 VNSLGS---SQS------YLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ  126 (303)
T ss_dssp             CCC-------CC------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred             CCCCCC---CCC------HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            987421   122      236788889889999999888764455555544

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.37  E-value=0.0016  Score=58.02  Aligned_cols=174  Identities=14%  Similarity=0.062  Sum_probs=97.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-----eEEEEEcCCCc----c--ccccccCCC-CCeEEEEccCCCcchHHHhhc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-----IVHATVRDPGK----L--QIFSKWTRS-DRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-----~V~~~~r~~~~----~--~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      ++||.|+||+|.||.+++-.|+..+.     ++.+.+.+.+.    .  ....+.... +-..-+..  .+  ...+.++
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i--~~--~~y~~~~  107 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI--GI--DPYEVFE  107 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE--ES--CHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEE--ec--CCHHHhC
Confidence            56899999999999999999988753     26665543322    1  111111100 11111111  11  2356688


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ++|+||-+||......  .      .+...++.|+.-.+.+.+.+.+. ++...++.+|--.-  ....     ...+..
T Consensus       108 daDvVVitag~prkpG--~------tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD--~~t~-----ia~k~s  172 (375)
T 7mdh_A          108 DVDWALLIGAKPRGPG--M------ERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCN--TNAL-----ICLKNA  172 (375)
T ss_dssp             TCSEEEECCCCCCCTT--C------CHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH--HHHH-----HHHHTC
T ss_pred             CCCEEEEcCCCCCCCC--C------CHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchh--HHHH-----HHHHHc
Confidence            9999999998643222  2      22478999999999999999875 43456666654210  0000     000111


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCC
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTS  212 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~  212 (348)
                      ...+         +...-+-+-+..-++-...++..++....++-..|.|.+...
T Consensus       173 g~~~---------~rvig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHgdt  218 (375)
T 7mdh_A          173 PDIP---------AKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTT  218 (375)
T ss_dssp             TTSC---------GGGEEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSSTT
T ss_pred             CCCC---------ccEEEeeehHHHHHHHHHHHHHhCcChhhcccceEEecCCCc
Confidence            0000         222333455555566666677777766666644678876543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.37  E-value=0.00013  Score=63.35  Aligned_cols=67  Identities=18%  Similarity=0.168  Sum_probs=49.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      .|||+|.|.|+||.+|+.+++.|.+.|++|++++|++.+. .+.. .    ++.     ..+   ..++++++|+||-+.
T Consensus         9 ~mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-~----g~~-----~~~---~~~~~~~aDvVi~av   75 (286)
T 3c24_A            9 VGPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-M----GIP-----LTD---GDGWIDEADVVVLAL   75 (286)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-T----TCC-----CCC---SSGGGGTCSEEEECS
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-c----CCC-----cCC---HHHHhcCCCEEEEcC
Confidence            3467999999999999999999999999999999976544 2222 1    221     122   234567899999876


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      .
T Consensus        76 ~   76 (286)
T 3c24_A           76 P   76 (286)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.34  E-value=0.00021  Score=62.48  Aligned_cols=81  Identities=17%  Similarity=0.121  Sum_probs=54.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcC---CCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRD---PGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~---~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      ...+++++|+|+ |.+|+.++..|.+.|. +|+++.|+   ..+. .+........+......++.+.+.+.+.+.++|+
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence            345789999997 9999999999999997 89999998   3333 2211110001223334455554334556678999


Q ss_pred             EEEcccc
Q 035965           83 VFHVAAS   89 (348)
Q Consensus        83 Vih~a~~   89 (348)
                      ||++...
T Consensus       224 IINaTp~  230 (312)
T 3t4e_A          224 LTNGTKV  230 (312)
T ss_dssp             EEECSST
T ss_pred             EEECCcC
Confidence            9998765

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.34  E-value=0.00039  Score=58.92  Aligned_cols=77  Identities=14%  Similarity=0.086  Sum_probs=52.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCC-------------------Ccc-cccc-ccCCCC--CeEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDP-------------------GKL-QIFS-KWTRSD--RLRLFQA   65 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~-~~~~-~~~~~~--~~~~~~~   65 (348)
                      +.++|+|.|+ |-+|+++++.|+..|. ++++++++.                   .+. .... +....+  .++.+..
T Consensus        30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  108 (249)
T 1jw9_B           30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  108 (249)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence            3578999996 9999999999999997 899999876                   222 1100 000112  2445555


Q ss_pred             cCCCcchHHHhhcCCCEEEEccc
Q 035965           66 DLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        66 Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ++.+ +.+.++++++|+||.+..
T Consensus       109 ~~~~-~~~~~~~~~~DvVi~~~d  130 (249)
T 1jw9_B          109 LLDD-AELAALIAEHDLVLDCTD  130 (249)
T ss_dssp             CCCH-HHHHHHHHTSSEEEECCS
T ss_pred             cCCH-hHHHHHHhCCCEEEEeCC
Confidence            5553 456677889999998853

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.32  E-value=0.00079  Score=60.08  Aligned_cols=72  Identities=11%  Similarity=0.140  Sum_probs=49.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcch---HHHhh--cCCCEEEEc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGS---FDKAV--MGCDGVFHV   86 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~--~~~d~Vih~   86 (348)
                      ++|+|+||+|-||...++.+...|.+|+++++++.+..+.+..    +.. ...|..+.+.   +.++.  .++|+||++
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~-~~~~~~~~~~~~~v~~~~~~~g~D~vid~  240 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDI----GAA-HVLNEKAPDFEATLREVMKAEQPRIFLDA  240 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHH----TCS-EEEETTSTTHHHHHHHHHHHHCCCEEEES
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC-EEEECCcHHHHHHHHHHhcCCCCcEEEEC
Confidence            6899999999999999999999999999999987655222211    122 1234433322   22222  279999999


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      ++
T Consensus       241 ~g  242 (349)
T 3pi7_A          241 VT  242 (349)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.31  E-value=0.00052  Score=61.72  Aligned_cols=74  Identities=18%  Similarity=0.178  Sum_probs=54.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      .+.+|||+|+ |-||..+++.+...|.+|+++++++.+. ...+..    +.. ...|..+.+.+.++..++|+||++++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l----Ga~-~v~~~~~~~~~~~~~~~~D~vid~~g  260 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF----GAD-SFLVSRDQEQMQAAAGTLDGIIDTVS  260 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS----CCS-EEEETTCHHHHHHTTTCEEEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----CCc-eEEeccCHHHHHHhhCCCCEEEECCC
Confidence            4578999996 9999999999999999999999987654 222111    222 22455566566666668999999987


Q ss_pred             c
Q 035965           89 S   89 (348)
Q Consensus        89 ~   89 (348)
                      .
T Consensus       261 ~  261 (366)
T 1yqd_A          261 A  261 (366)
T ss_dssp             S
T ss_pred             c
Confidence            4

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.29  E-value=0.001  Score=60.33  Aligned_cols=71  Identities=15%  Similarity=0.027  Sum_probs=54.6

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      +.+.+++|+|.|+ |.+|..+++.+.+.|++|++++.++...... .     .-..+..|..|.+.+.++++.+|+|.
T Consensus        10 ~~~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~-~-----ad~~~~~~~~d~~~l~~~~~~~dvI~   80 (389)
T 3q2o_A           10 IILPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQ-V-----ADIEIVASYDDLKAIQHLAEISDVVT   80 (389)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTT-T-----CSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHH-h-----CCceEecCcCCHHHHHHHHHhCCEee
Confidence            3456789999997 8999999999999999999998765422000 0     12356688999989999888899874

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.29  E-value=0.00042  Score=63.50  Aligned_cols=70  Identities=19%  Similarity=0.171  Sum_probs=54.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      +.+++|+|.|+ |.+|+.+++.+.+.|++|++++.++...... .     .-+++..|..|.+.+.++++++|+|+-
T Consensus        33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~-~-----ad~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGA-V-----ADRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHH-H-----SSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhh-h-----CCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            34679999997 9999999999999999999998665432110 1     124567899999999998888999883

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.28  E-value=0.00028  Score=61.49  Aligned_cols=76  Identities=16%  Similarity=0.075  Sum_probs=53.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ...+++|+|+|+ |.+|+.++..|++.|. +|++++|+..+. .+......  ...    +..+.+++.+.+.++|+||+
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~--~~~----~~~~~~~~~~~~~~aDivIn  210 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDE--RRS----AYFSLAEAETRLAEYDIIIN  210 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCS--SSC----CEECHHHHHHTGGGCSEEEE
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhh--ccC----ceeeHHHHHhhhccCCEEEE
Confidence            345789999997 8899999999999997 999999987655 33221110  000    11122456667788999999


Q ss_pred             ccccC
Q 035965           86 VAASM   90 (348)
Q Consensus        86 ~a~~~   90 (348)
                      +.+..
T Consensus       211 ~t~~~  215 (297)
T 2egg_A          211 TTSVG  215 (297)
T ss_dssp             CSCTT
T ss_pred             CCCCC
Confidence            98754

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.26  E-value=0.0013  Score=57.91  Aligned_cols=109  Identities=14%  Similarity=0.091  Sum_probs=70.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-cccc-c---cCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-QIFS-K---WTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-~~~~-~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      |||.|+|+ |.+|+.++..|+..|+  +|+++++++.+. .... .   ........+..   +|.    +.++++|+||
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~----~~~~~aDvVi   72 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKGSDVVI   72 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCH----HHhCCCCEEE
Confidence            57999998 9999999999999999  999999976533 1110 0   00001122222   232    3467899999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      -+++......  ..     . ......|+.....+++.+.+..+...+|.+|
T Consensus        73 iav~~~~~~g--~~-----r-~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           73 VAAGVPQKPG--ET-----R-LQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             ECCCCCCCSS--CC-----H-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EccCCCCCCC--CC-----H-HHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            9988644221  11     1 2567778888888988888765334555543

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.23  E-value=0.00036  Score=60.94  Aligned_cols=73  Identities=23%  Similarity=0.156  Sum_probs=51.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      +.+|+|+||+|.+|..+++.+...|.+|+++++++.+....+..    +... ..|..+.+++.+.+.++|+||+ ++.
T Consensus       126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~~-~~~~~~~~~~~~~~~~~d~vid-~g~  198 (302)
T 1iz0_A          126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL----GAEE-AATYAEVPERAKAWGGLDLVLE-VRG  198 (302)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT----TCSE-EEEGGGHHHHHHHTTSEEEEEE-CSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCCE-EEECCcchhHHHHhcCceEEEE-CCH
Confidence            57999999999999999999999999999999977655222211    2221 2344431234444478999999 763

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.23  E-value=0.00028  Score=63.12  Aligned_cols=73  Identities=16%  Similarity=0.122  Sum_probs=51.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhh----cCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAV----MGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----~~~d~Vi   84 (348)
                      .+++|||+||+|-||..+++.+...|.+|+++++++.+. ....+     +.. ...|..+.+....+.    .++|+||
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l-----Ga~-~~~~~~~~~~~~~~~~~~~~g~Dvvi  240 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL-----GAK-RGINYRSEDFAAVIKAETGQGVDIIL  240 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-----TCS-EEEETTTSCHHHHHHHHHSSCEEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-----CCC-EEEeCCchHHHHHHHHHhCCCceEEE
Confidence            357899999999999999999999999999999987655 22222     122 123444433222222    2699999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      ++++
T Consensus       241 d~~g  244 (353)
T 4dup_A          241 DMIG  244 (353)
T ss_dssp             ESCC
T ss_pred             ECCC
Confidence            9987

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.22  E-value=0.0011  Score=58.02  Aligned_cols=109  Identities=19%  Similarity=0.219  Sum_probs=72.8

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-c-cccccC----CCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-Q-IFSKWT----RSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~-~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ||.|+|| |.+|+.++..|+..|. +|.+++++..+. . ...+..    .....++...  .|   . ++++++|+||-
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~Vi~   73 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NS---Y-EDMRGSDIVLV   73 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-GGGTTCSEEEE
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CC---H-HHhCCCCEEEE
Confidence            6899998 9999999999988887 799999986543 1 111110    0112222221  12   2 35789999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      +++......  ..      ....+..|+.-.+.+++.+.+..+..++|.+|
T Consensus        74 ~ag~~~k~G--~~------r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (308)
T 2d4a_B           74 TAGIGRKPG--MT------REQLLEANANTMADLAEKIKAYAKDAIVVITT  116 (308)
T ss_dssp             CCSCCCCSS--CC------THHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             eCCCCCCCC--Cc------HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            998644322  12      23678889999999999998876455666664

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.22  E-value=0.00018  Score=64.61  Aligned_cols=75  Identities=16%  Similarity=0.202  Sum_probs=53.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ..++|+|+|+ |-+|+.+++.|...|.+|++++|++.+. .......  ..+..+   ..+.+++.+.+.++|+||++++
T Consensus       166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~DvVI~~~~  239 (361)
T 1pjc_A          166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG--SRVELL---YSNSAEIETAVAEADLLIGAVL  239 (361)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGSEEE---ECCHHHHHHHHHTCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC--ceeEee---eCCHHHHHHHHcCCCEEEECCC
Confidence            4579999999 9999999999999999999999987654 2222111  112111   2234566677779999999987


Q ss_pred             cC
Q 035965           89 SM   90 (348)
Q Consensus        89 ~~   90 (348)
                      ..
T Consensus       240 ~~  241 (361)
T 1pjc_A          240 VP  241 (361)
T ss_dssp             CT
T ss_pred             cC
Confidence            53

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.22  E-value=0.00083  Score=59.27  Aligned_cols=35  Identities=23%  Similarity=0.259  Sum_probs=29.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDP   45 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~   45 (348)
                      |+||.|.||||++|..|++.|.+. .+++..+..+.
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~   39 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSA   39 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecC
Confidence            579999999999999999999884 56887775443

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.22  E-value=0.0016  Score=57.64  Aligned_cols=95  Identities=13%  Similarity=0.089  Sum_probs=56.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC---CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG---YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      +|+||.|.||+|++|+.|++.|.+++   .+++++....+........  ...+.+  .|+ +++    .++++|+||-+
T Consensus         2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~--~~~i~~--~~~-~~~----~~~~vDvVf~a   72 (336)
T 2r00_A            2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFN--GKTVRV--QNV-EEF----DWSQVHIALFS   72 (336)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEET--TEEEEE--EEG-GGC----CGGGCSEEEEC
T ss_pred             CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeec--CceeEE--ecC-ChH----HhcCCCEEEEC
Confidence            35799999999999999999999873   4666666322111101010  012222  222 122    23579999988


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      .+..                        .+......+.+.|  .++|-.|+..
T Consensus        73 ~g~~------------------------~s~~~a~~~~~~G--~~vId~s~~~   99 (336)
T 2r00_A           73 AGGE------------------------LSAKWAPIAAEAG--VVVIDNTSHF   99 (336)
T ss_dssp             SCHH------------------------HHHHHHHHHHHTT--CEEEECSSTT
T ss_pred             CCch------------------------HHHHHHHHHHHcC--CEEEEcCCcc
Confidence            7521                        1334555566667  4788888863

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.21  E-value=0.00027  Score=61.99  Aligned_cols=38  Identities=26%  Similarity=0.324  Sum_probs=32.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      +||+|.|.|+ |-+|+.++..|.+.|++|++++|++.+.
T Consensus         2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~   39 (316)
T 2ew2_A            2 NAMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHI   39 (316)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHH
Confidence            3578999996 9999999999999999999999976544

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.20  E-value=0.0003  Score=60.72  Aligned_cols=78  Identities=15%  Similarity=0.262  Sum_probs=54.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccC-CCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWT-RSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      ...+++++|+|+ |.+|+.++..|.+.|. +|++++|+..+. .+..... ..+.+.+...++   +++.+.+.++|+||
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiVI  199 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIAAADGVV  199 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEEE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEEE
Confidence            345789999998 9999999999999998 799999987655 3322110 011233333343   34566677899999


Q ss_pred             Ecccc
Q 035965           85 HVAAS   89 (348)
Q Consensus        85 h~a~~   89 (348)
                      ++...
T Consensus       200 naTp~  204 (283)
T 3jyo_A          200 NATPM  204 (283)
T ss_dssp             ECSST
T ss_pred             ECCCC
Confidence            99764

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.18  E-value=0.0037  Score=55.71  Aligned_cols=94  Identities=20%  Similarity=0.145  Sum_probs=54.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCe---EEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYI---VHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      +++|.|.||||++|..|++.|.+.++.   +..+.-..+........    +.+...-++. .+    .++++|+||-+.
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~----~~~~~~~~~~-~~----~~~~~Dvvf~a~   72 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFK----DQDITIEETT-ET----AFEGVDIALFSA   72 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEET----TEEEEEEECC-TT----TTTTCSEEEECS
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceec----CCCceEeeCC-HH----HhcCCCEEEECC
Confidence            578999999999999999988887663   33333222111111111    1122222222 11    246899999887


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      +...                        +......+.+.|  .++|-.|+..
T Consensus        73 ~~~~------------------------s~~~a~~~~~~G--~~vIDlSa~~   98 (366)
T 3pwk_A           73 GSST------------------------SAKYAPYAVKAG--VVVVDNTSYF   98 (366)
T ss_dssp             CHHH------------------------HHHHHHHHHHTT--CEEEECSSTT
T ss_pred             ChHh------------------------HHHHHHHHHHCC--CEEEEcCCcc
Confidence            6211                        234555555667  4788888864

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.18  E-value=0.00033  Score=61.07  Aligned_cols=64  Identities=13%  Similarity=0.032  Sum_probs=48.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      +++|.|.| .|.+|..+++.|++.|++|++.+|++.+. .+...     ++.+       ..++.++++ +|+||-+..
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-----g~~~-------~~~~~~~~~-aDvvi~~vp   79 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-----GATL-------ADSVADVAA-ADLIHITVL   79 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-----TCEE-------CSSHHHHTT-SSEEEECCS
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-----CCEE-------cCCHHHHHh-CCEEEEECC
Confidence            56899999 59999999999999999999999988765 33221     2221       235667777 999998764

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.16  E-value=0.00018  Score=67.96  Aligned_cols=108  Identities=19%  Similarity=0.122  Sum_probs=59.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      +++++++|||| |.+|+.++.+|++.|.+|++++|+..+. .+....    +.+.+  ++.|.+.+  ....+|+|||++
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~----~~~~~--~~~dl~~~--~~~~~DilVN~a  432 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI----GGKAL--SLTDLDNY--HPEDGMVLANTT  432 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT----TC-CE--ETTTTTTC----CCSEEEEECS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCcee--eHHHhhhc--cccCceEEEECC
Confidence            45678999999 7999999999999999999999986654 322211    11111  12222111  123589999999


Q ss_pred             ccCccc-----cccccccccchhhhhhhhhHHHH-HHHHHHHhhcC
Q 035965           88 ASMEFD-----INVKDNIETYVQSTVINPAIQST-LNLLKACLKSE  127 (348)
Q Consensus        88 ~~~~~~-----~~~~~~~~~~~~~~~~~~nv~~~-~~ll~~~~~~~  127 (348)
                      +.....     .......+.|  ...+++|+.+. ..+++.+++.|
T Consensus       433 gvg~~~~~~~~~~~~~~~~~~--~~v~Dvny~p~~T~ll~~a~~~G  476 (523)
T 2o7s_A          433 SMGMQPNVEETPISKDALKHY--ALVFDAVYTPRITRLLREAEESG  476 (523)
T ss_dssp             STTCTTCTTCCSSCTTTGGGE--EEEEECCCSSSSCHHHHHHHTTT
T ss_pred             CCCCCCCCCCCCCChHHcCcC--cEEEEEeeCCccCHHHHHHHHCC
Confidence            863211     1111222223  34556665431 24666666666

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=97.16  E-value=0.00054  Score=57.57  Aligned_cols=35  Identities=17%  Similarity=0.246  Sum_probs=28.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEE-EEcCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHA-TVRDP   45 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~-~~r~~   45 (348)
                      +|+||.|+|+ |.+|+.+++.+.+.++++.+ ++++.
T Consensus         2 ~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~   37 (243)
T 3qy9_A            2 ASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP   37 (243)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred             CceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc
Confidence            4689999999 99999999999988777765 45543

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.13  E-value=0.00037  Score=61.54  Aligned_cols=75  Identities=17%  Similarity=0.089  Sum_probs=51.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchH---HHhhc--CCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSF---DKAVM--GCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~---~~~~~--~~d~Vi   84 (348)
                      .+++|||+||+|.+|..+++.+...|.+|+++++++.+....+..    +.. ...|..+.+..   .+...  ++|+||
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~-~~~~~~~~~~~~~~~~~~~~~g~Dvvi  214 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL----GAW-ETIDYSHEDVAKRVLELTDGKKCPVVY  214 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC-EEEeCCCccHHHHHHHHhCCCCceEEE
Confidence            357999999999999999999999999999999977654222211    121 12344443332   33332  699999


Q ss_pred             Ecccc
Q 035965           85 HVAAS   89 (348)
Q Consensus        85 h~a~~   89 (348)
                      ++++.
T Consensus       215 d~~g~  219 (325)
T 3jyn_A          215 DGVGQ  219 (325)
T ss_dssp             ESSCG
T ss_pred             ECCCh
Confidence            99883

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.11  E-value=0.00099  Score=58.03  Aligned_cols=55  Identities=16%  Similarity=0.259  Sum_probs=43.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ++++|.|.||.|.+|+.++..|.+.|++|++++|++..                        +..++++++|+||-+..
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------------------------~~~~~~~~aDvVilavp   74 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------------------------VAESILANADVVIVSVP   74 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------------------------GHHHHHTTCSEEEECSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------------------------CHHHHhcCCCEEEEeCC
Confidence            45789999988999999999999999999999886531                        24455667788877653

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.11  E-value=0.00023  Score=59.14  Aligned_cols=67  Identities=19%  Similarity=0.235  Sum_probs=46.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEE-EEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHA-TVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~-~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      |+||+|.|.| +|.+|+.+++.|.+.|++|++ .+|++.+. .+....    ++....       +..+.++++|+||-+
T Consensus        21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~----g~~~~~-------~~~~~~~~aDvVila   88 (220)
T 4huj_A           21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF----GASVKA-------VELKDALQADVVILA   88 (220)
T ss_dssp             GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH----TTTEEE-------CCHHHHTTSSEEEEE
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh----CCCccc-------ChHHHHhcCCEEEEe
Confidence            4578999999 699999999999999999998 78877654 322211    111111       112335789999987


Q ss_pred             c
Q 035965           87 A   87 (348)
Q Consensus        87 a   87 (348)
                      .
T Consensus        89 v   89 (220)
T 4huj_A           89 V   89 (220)
T ss_dssp             S
T ss_pred             C
Confidence            5

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.11  E-value=0.00072  Score=60.08  Aligned_cols=73  Identities=12%  Similarity=0.158  Sum_probs=51.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchH---HHhhc--CCCEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSF---DKAVM--GCDGV   83 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~---~~~~~--~~d~V   83 (348)
                      .+++|||+||+|-||..+++.+...|.+|+++++++.+. ....+     +.+. ..|..+.+..   .+...  ++|+|
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l-----ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvv  217 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL-----GAAY-VIDTSTAPLYETVMELTNGIGADAA  217 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH-----TCSE-EEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC-----CCcE-EEeCCcccHHHHHHHHhCCCCCcEE
Confidence            357999999999999999999988999999999987765 22222     1221 2344443322   22222  69999


Q ss_pred             EEccc
Q 035965           84 FHVAA   88 (348)
Q Consensus        84 ih~a~   88 (348)
                      |++++
T Consensus       218 id~~g  222 (340)
T 3gms_A          218 IDSIG  222 (340)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99987

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.09  E-value=0.00084  Score=59.73  Aligned_cols=76  Identities=20%  Similarity=0.136  Sum_probs=50.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCc-chHHHhhc--CCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVE-GSFDKAVM--GCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~--~~d~Vih~   86 (348)
                      .+++|||+||+|.||..+++.+...|.+|+++++++.+....+...   --..+..+ .+. +.+.+...  ++|+||++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g---a~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~  234 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVG---ADIVLPLE-EGWAKAVREATGGAGVDMVVDP  234 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHT---CSEEEESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcC---CcEEecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence            3579999999999999999999999999999999776552222111   11222222 221 22333332  59999999


Q ss_pred             ccc
Q 035965           87 AAS   89 (348)
Q Consensus        87 a~~   89 (348)
                      ++.
T Consensus       235 ~g~  237 (342)
T 4eye_A          235 IGG  237 (342)
T ss_dssp             CC-
T ss_pred             Cch
Confidence            883

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.07  E-value=0.0013  Score=58.58  Aligned_cols=33  Identities=18%  Similarity=0.274  Sum_probs=27.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATV   42 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~   42 (348)
                      +|+||.|.||+|++|+.+++.|.+.. .+|+++.
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            35799999999999999999988753 5787775

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.07  E-value=0.0052  Score=46.75  Aligned_cols=63  Identities=21%  Similarity=0.317  Sum_probs=43.1

Q ss_pred             CCCeEEEeCCC---ChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           10 RSKTFCVTGAN---GYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGat---GfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ..++|.|.|+|   |-+|..+++.|++.|++|+.++.+..+  .       .++.       -..++.++.+.+|+++-+
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~--i-------~G~~-------~~~s~~el~~~vDlvii~   76 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE--I-------EGLK-------CYRSVRELPKDVDVIVFV   76 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE--E-------TTEE-------CBSSGGGSCTTCCEEEEC
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe--E-------CCee-------ecCCHHHhCCCCCEEEEE
Confidence            46799999997   899999999999999997777665321  1       0222       122344444578988876


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      ..
T Consensus        77 vp   78 (138)
T 1y81_A           77 VP   78 (138)
T ss_dssp             SC
T ss_pred             eC
Confidence            53

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.07  E-value=0.0007  Score=60.55  Aligned_cols=76  Identities=24%  Similarity=0.194  Sum_probs=49.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEE------ccCC-CcchHHHhhcCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQ------ADLQ-VEGSFDKAVMGC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~------~Dl~-d~~~~~~~~~~~   80 (348)
                      |++|+|.|.|+ |.+|+.++..|.+.|++|++++|++.+. .+....    .+.+..      ..+. ...++.++++++
T Consensus         2 m~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (359)
T 1bg6_A            2 IESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG----AIIAEGPGLAGTAHPDLLTSDIGLAVKDA   76 (359)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT----SEEEESSSCCEEECCSEEESCHHHHHTTC
T ss_pred             CCcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC----CeEEeccccccccccceecCCHHHHHhcC
Confidence            34579999996 9999999999999999999999976544 222110    111110      1110 123455667789


Q ss_pred             CEEEEcccc
Q 035965           81 DGVFHVAAS   89 (348)
Q Consensus        81 d~Vih~a~~   89 (348)
                      |+||-+...
T Consensus        77 D~vi~~v~~   85 (359)
T 1bg6_A           77 DVILIVVPA   85 (359)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEEeCCc
Confidence            999988754

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.05  E-value=0.00066  Score=60.53  Aligned_cols=75  Identities=17%  Similarity=0.243  Sum_probs=52.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcch---HHHhh--cCCCEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGS---FDKAV--MGCDGV   83 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~--~~~d~V   83 (348)
                      .+++|||+||+|-||..+++.+... |.+|+++++++.+....+..    +.. ...|..+.+.   +.++.  .++|+|
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~~~~~~~d~v  244 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----GAD-YVINASMQDPLAEIRRITESKGVDAV  244 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCC-EEecCCCccHHHHHHHHhcCCCceEE
Confidence            3578999999999999999999998 99999999876554222111    122 2235555433   34444  369999


Q ss_pred             EEcccc
Q 035965           84 FHVAAS   89 (348)
Q Consensus        84 ih~a~~   89 (348)
                      |++++.
T Consensus       245 i~~~g~  250 (347)
T 1jvb_A          245 IDLNNS  250 (347)
T ss_dssp             EESCCC
T ss_pred             EECCCC
Confidence            999883

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.05  E-value=0.00057  Score=58.66  Aligned_cols=69  Identities=9%  Similarity=0.035  Sum_probs=51.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ..+++++|+|+ |.+|+.++..|.+.|. +|++++|+..+. .+..      .+...     ..+++.+++.++|+||++
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~------~~~~~-----~~~~~~~~~~~aDiVIna  182 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL------NINKI-----NLSHAESHLDEFDIIINT  182 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS------CCEEE-----CHHHHHHTGGGCSEEEEC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH------hcccc-----cHhhHHHHhcCCCEEEEC
Confidence            45789999997 9999999999999998 899999988765 3221      22222     234566667789999998


Q ss_pred             ccc
Q 035965           87 AAS   89 (348)
Q Consensus        87 a~~   89 (348)
                      ...
T Consensus       183 Tp~  185 (277)
T 3don_A          183 TPA  185 (277)
T ss_dssp             CC-
T ss_pred             ccC
Confidence            754

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=97.05  E-value=0.0016  Score=59.24  Aligned_cols=70  Identities=16%  Similarity=0.115  Sum_probs=54.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ++++|+|+|+ |.+|..+++.+.+.|++|++++ .+... .....   +....+.+|..|.+.+.++++.+|+|+-
T Consensus        23 ~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p-~~~~a---d~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           23 NSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSP-AKQIS---AHDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCT-TGGGC---CSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCc-HHHhc---cccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            3679999997 8999999999999999999999 54322 11111   1224578999999999999999998764

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.04  E-value=0.00018  Score=62.26  Aligned_cols=38  Identities=24%  Similarity=0.266  Sum_probs=33.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      .+++|.|.|+ |.+|+.+++.|++.|++|++.+|++...
T Consensus         3 ~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~   40 (283)
T 4e12_A            3 GITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDAL   40 (283)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence            3579999986 9999999999999999999999987543

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=97.03  E-value=0.00083  Score=62.63  Aligned_cols=39  Identities=21%  Similarity=0.379  Sum_probs=34.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCCCcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDPGKL   48 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~~~~   48 (348)
                      +++|+|.|.|+ |++|..++..|++.  |++|++++|++.+.
T Consensus         7 ~~~mkI~VIG~-G~vG~~~A~~La~~g~g~~V~~~D~~~~~v   47 (481)
T 2o3j_A            7 GKVSKVVCVGA-GYVGGPTCAMIAHKCPHITVTVVDMNTAKI   47 (481)
T ss_dssp             CCCCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence            45679999995 99999999999998  79999999987655

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.03  E-value=0.0015  Score=59.85  Aligned_cols=96  Identities=14%  Similarity=0.271  Sum_probs=63.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC-CC---eEEEEEcCCCccccccccCCCCCeEEEEccCCC--c-chHHHhhcCCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER-GY---IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQV--E-GSFDKAVMGCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~-g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d--~-~~~~~~~~~~d~V   83 (348)
                      .++|+|.| .|-||+.+++.|+++ ++   +|++++............    ++++...++++  . +.+.+++++.|+|
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~----g~~~~~~~Vdadnv~~~l~aLl~~~DvV   87 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQY----GVSFKLQQITPQNYLEVIGSTLEENDFL   87 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHH----TCEEEECCCCTTTHHHHTGGGCCTTCEE
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhc----CCceeEEeccchhHHHHHHHHhcCCCEE
Confidence            46799999 599999999999887 44   688887654432222111    45666666654  3 3355677767999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      ||++-..              .          ...++++|.+.|    +-|++++.
T Consensus        88 IN~s~~~--------------~----------~l~Im~acleaG----v~YlDTa~  115 (480)
T 2ph5_A           88 IDVSIGI--------------S----------SLALIILCNQKG----ALYINAAT  115 (480)
T ss_dssp             EECCSSS--------------C----------HHHHHHHHHHHT----CEEEESSC
T ss_pred             EECCccc--------------c----------CHHHHHHHHHcC----CCEEECCC
Confidence            9855211              0          346899999888    55666653

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.02  E-value=0.0023  Score=57.76  Aligned_cols=70  Identities=16%  Similarity=0.107  Sum_probs=53.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |++|+|+|+ |.+|..+++.|.+.|++|++++.++.... ...     .-.++..|..|.+.+.++++++|.|+-..
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~-~~~-----~~~~~~~~~~d~~~l~~~~~~~d~v~~~~   70 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPA-GQV-----ADEQIVAGFFDSERIEDLVKGSDVTTYDL   70 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTT-GGG-----SSEEEECCTTCHHHHHHHHHTCSEEEESC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCch-hhh-----CceEEECCCCCHHHHHHHHhcCCEEEecc
Confidence            478999997 89999999999999999999987654321 111     11356788999988888888899988643

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.01  E-value=0.00074  Score=58.02  Aligned_cols=73  Identities=12%  Similarity=0.130  Sum_probs=49.5

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhh-cCCCEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAV-MGCDGVFHV   86 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~Vih~   86 (348)
                      ..+++++|+|+ |.+|+.++..|++.|++|++++|+..+. .+.........+.  ..|+.      ++. .++|+||++
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~--~~~~~------~~~~~~~DivIn~  187 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQ--AVSMD------SIPLQTYDLVINA  187 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEE--EEEGG------GCCCSCCSEEEEC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeE--EeeHH------HhccCCCCEEEEC
Confidence            45789999998 8899999999999999999999987655 3322111001222  22321      111 379999999


Q ss_pred             cccC
Q 035965           87 AASM   90 (348)
Q Consensus        87 a~~~   90 (348)
                      ++..
T Consensus       188 t~~~  191 (272)
T 1p77_A          188 TSAG  191 (272)
T ss_dssp             CCC-
T ss_pred             CCCC
Confidence            8854

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.00  E-value=0.0011  Score=61.32  Aligned_cols=39  Identities=26%  Similarity=0.323  Sum_probs=34.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      .+++|||+||+|-||...++.+...|.+|+++++++.+.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~  258 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE  258 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            367999999999999999999999999999999876554

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.97  E-value=0.0037  Score=53.69  Aligned_cols=73  Identities=19%  Similarity=0.261  Sum_probs=44.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEE-EcCCCcc---ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLER-GYIVHAT-VRDPGKL---QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~-~r~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      ++.||.|.|++|-+|+.+++.+.+. +.++.++ +|+.+..   ....+.    ++.  ..++.-.+++.+++.++|+||
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~----G~~--~~gv~v~~dl~~ll~~aDVvI   93 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILI----GSD--FLGVRITDDPESAFSNTEGIL   93 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGT----TCS--CCSCBCBSCHHHHTTSCSEEE
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhh----ccC--cCCceeeCCHHHHhcCCCEEE
Confidence            4569999999999999999998765 6787766 4543211   111111    000  112222235666677889988


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      .+..
T Consensus        94 DFT~   97 (288)
T 3ijp_A           94 DFSQ   97 (288)
T ss_dssp             ECSC
T ss_pred             EcCC
Confidence            8763

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.97  E-value=0.00085  Score=59.46  Aligned_cols=75  Identities=20%  Similarity=0.215  Sum_probs=51.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcch---HHHhh--cCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGS---FDKAV--MGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~--~~~d~Vi   84 (348)
                      .+++|||+||+|.||..+++.+...|.+|+++++++.+....+..    +.. ...|..+.+.   +.+..  .++|+||
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~-~~~~~~~~~~~~~~~~~~~~~g~D~vi  222 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEY----GAE-YLINASKEDILRQVLKFTNGKGVDASF  222 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCc-EEEeCCCchHHHHHHHHhCCCCceEEE
Confidence            357999999999999999999999999999999976554222211    122 1234444332   23332  2589999


Q ss_pred             Ecccc
Q 035965           85 HVAAS   89 (348)
Q Consensus        85 h~a~~   89 (348)
                      ++++.
T Consensus       223 d~~g~  227 (334)
T 3qwb_A          223 DSVGK  227 (334)
T ss_dssp             ECCGG
T ss_pred             ECCCh
Confidence            99983

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.95  E-value=0.0013  Score=57.56  Aligned_cols=67  Identities=16%  Similarity=0.224  Sum_probs=49.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ..||+|.|.|. |.+|+.+++.|++.|++|++.+|++.+. .+...     ++..       ..+..++++++|+||-+.
T Consensus        19 ~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~-----g~~~-------~~~~~~~~~~aDvvi~~v   85 (310)
T 3doj_A           19 SHMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH-----GASV-------CESPAEVIKKCKYTIAML   85 (310)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-----TCEE-------CSSHHHHHHHCSEEEECC
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-----CCeE-------cCCHHHHHHhCCEEEEEc
Confidence            45689999985 9999999999999999999999988765 33221     2221       234566677789998775


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      .
T Consensus        86 p   86 (310)
T 3doj_A           86 S   86 (310)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.94  E-value=0.0007  Score=60.83  Aligned_cols=72  Identities=14%  Similarity=0.204  Sum_probs=50.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC---CccccccccCCCCCeEEEEccCCC--cchHHHhhcCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP---GKLQIFSKWTRSDRLRLFQADLQV--EGSFDKAVMGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~d~Vi   84 (348)
                      ++++|||+|| |.+|..+++.+...|.+|+++++++   .+..+.+..    +.+.+  | .+  .+.+.+.-.++|+||
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~----ga~~v--~-~~~~~~~~~~~~~~~d~vi  251 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET----KTNYY--N-SSNGYDKLKDSVGKFDVII  251 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH----TCEEE--E-CTTCSHHHHHHHCCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh----CCcee--c-hHHHHHHHHHhCCCCCEEE
Confidence            3689999999 9999999999998999999999987   443222211    34444  4 43  122222114699999


Q ss_pred             Ecccc
Q 035965           85 HVAAS   89 (348)
Q Consensus        85 h~a~~   89 (348)
                      ++++.
T Consensus       252 d~~g~  256 (366)
T 2cdc_A          252 DATGA  256 (366)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99873

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.94  E-value=0.0028  Score=54.00  Aligned_cols=59  Identities=17%  Similarity=0.161  Sum_probs=49.6

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ....+++++|.|+++.+|+.++..|+..|.+|+++.+..                         ..+.+.++.+|+||.+
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t-------------------------~~L~~~~~~ADIVI~A  210 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT-------------------------KDLSLYTRQADLIIVA  210 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------------------SCHHHHHTTCSEEEEC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc-------------------------hhHHHHhhcCCEEEEC
Confidence            345789999999999999999999999999999987643                         1366778899999999


Q ss_pred             cccC
Q 035965           87 AASM   90 (348)
Q Consensus        87 a~~~   90 (348)
                      .+..
T Consensus       211 vg~p  214 (285)
T 3p2o_A          211 AGCV  214 (285)
T ss_dssp             SSCT
T ss_pred             CCCC
Confidence            8753

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.92  E-value=0.00086  Score=58.66  Aligned_cols=67  Identities=24%  Similarity=0.291  Sum_probs=49.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      .++++|.|.| .|.+|+.+++.|++.|++|++.+|++.+. .+...     ++..       ..+..++++++|+||-+.
T Consensus         7 ~~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-----g~~~-------~~~~~e~~~~aDvVi~~v   73 (306)
T 3l6d_A            7 SFEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA-----GAHL-------CESVKAALSASPATIFVL   73 (306)
T ss_dssp             CCSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH-----TCEE-------CSSHHHHHHHSSEEEECC
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-----CCee-------cCCHHHHHhcCCEEEEEe
Confidence            4567899998 59999999999999999999999987654 32221     2211       234566777899999876


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      .
T Consensus        74 p   74 (306)
T 3l6d_A           74 L   74 (306)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.90  E-value=0.00083  Score=60.56  Aligned_cols=76  Identities=20%  Similarity=0.146  Sum_probs=54.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ..+++|+|+|+ |-||..+++.|...|.+|++++|++.+. .......  ..+   ..+..+..++.+++.++|+||.++
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g--~~~---~~~~~~~~~l~~~l~~aDvVi~~~  239 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFC--GRI---HTRYSSAYELEGAVKRADLVIGAV  239 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT--TSS---EEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcC--Cee---EeccCCHHHHHHHHcCCCEEEECC
Confidence            45789999998 9999999999999999999999987654 2221111  111   122334556777788899999988


Q ss_pred             ccC
Q 035965           88 ASM   90 (348)
Q Consensus        88 ~~~   90 (348)
                      +..
T Consensus       240 ~~p  242 (377)
T 2vhw_A          240 LVP  242 (377)
T ss_dssp             CCT
T ss_pred             CcC
Confidence            743

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.89  E-value=0.0034  Score=56.19  Aligned_cols=71  Identities=18%  Similarity=0.135  Sum_probs=51.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCC-CcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQ-VEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ||+|+|+|| |..|..++..+.+.|++|++++.++...... .     --+++..|.. |.+.+....+++|+|+-..+
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~-~-----aD~~~~~~~~~d~~~~~~~~~~~D~v~~~~~   72 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIRN-Y-----ADEFYCFDVIKEPEKLLELSKRVDAVLPVNE   72 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTTT-T-----SSEEEECCTTTCHHHHHHHHTSSSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhHh-h-----CCEEEECCCCcCHHHHHHHhcCCCEEEECCC
Confidence            789999996 8999999999999999999999876432100 0     1245666654 55666666778999875443

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.87  E-value=0.0003  Score=60.98  Aligned_cols=77  Identities=13%  Similarity=0.085  Sum_probs=50.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCC--CCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRS--DRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      +.+++++|||+ |.+|+.+++.|++.| +|++++|+..+. .+.......  ... .+.+|+.+.   .+.+.++|+||+
T Consensus       126 l~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~DilVn  199 (287)
T 1nvt_A          126 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL---DVDLDGVDIIIN  199 (287)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT---TCCCTTCCEEEE
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH---HHhhCCCCEEEE
Confidence            45789999998 599999999999999 999999976544 222110000  000 011233331   344567999999


Q ss_pred             ccccCc
Q 035965           86 VAASME   91 (348)
Q Consensus        86 ~a~~~~   91 (348)
                      +++...
T Consensus       200 ~ag~~~  205 (287)
T 1nvt_A          200 ATPIGM  205 (287)
T ss_dssp             CSCTTC
T ss_pred             CCCCCC
Confidence            998643

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=96.87  E-value=0.00015  Score=67.10  Aligned_cols=119  Identities=14%  Similarity=0.085  Sum_probs=72.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC-----CCeEEEEEcCCCcc-ccccc-----cCCCCCeEEEEccCCCcchHHHhhcC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER-----GYIVHATVRDPGKL-QIFSK-----WTRSDRLRLFQADLQVEGSFDKAVMG   79 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~-----g~~V~~~~r~~~~~-~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~~   79 (348)
                      ++||.|.||.++.|..|+..|+.+     +.+|.+.++++.+. .....     +......++...     .++.+++++
T Consensus        28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t-----~D~~eal~~  102 (472)
T 1u8x_X           28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAFTD  102 (472)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHHSS
T ss_pred             CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEE-----CCHHHHHcC
Confidence            359999999666688899889887     67999999987543 11110     000112222221     245677889


Q ss_pred             CCEEEEccccCccccccccccccchh--------------hhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQ--------------STVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~--------------~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      +|+||.+++.........+  +.+|.              -....-|+...+.+++.+++..+...+|.+|
T Consensus       103 AD~VViaag~~~~~g~~rd--~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~T  171 (472)
T 1u8x_X          103 VDFVMAHIRVGKYAMRALD--EQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYS  171 (472)
T ss_dssp             CSEEEECCCTTHHHHHHHH--HHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCEEEEcCCCccccccchh--hhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            9999999986443221111  00000              0225567788888999998887455555444

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.86  E-value=0.0016  Score=57.25  Aligned_cols=65  Identities=28%  Similarity=0.348  Sum_probs=47.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      +|+|.|.|+ |.+|+.++..|.+.|++|++++|++.+. .+...     ++..       ..+..++++++|+||-+..
T Consensus        30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-----g~~~-------~~~~~~~~~~~DvVi~av~   95 (316)
T 2uyy_A           30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQE-----GARL-------GRTPAEVVSTCDITFACVS   95 (316)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHT-----TCEE-------CSCHHHHHHHCSEEEECCS
T ss_pred             CCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHc-----CCEE-------cCCHHHHHhcCCEEEEeCC
Confidence            478999995 9999999999999999999999987654 32221     2221       1134455667899988764

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=96.86  E-value=0.00061  Score=60.89  Aligned_cols=79  Identities=14%  Similarity=0.175  Sum_probs=50.1

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC---CCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT---RSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      +++++|+|.|.|+ |.+|+.++..|.++|++|++.+|++... .+.....   ..+++.+ ...+.-..++.++++++|+
T Consensus        25 m~~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aDv  102 (356)
T 3k96_A           25 MEPFKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVTD  102 (356)
T ss_dssp             --CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCCE
T ss_pred             ccccCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCCE
Confidence            3445679999997 9999999999999999999999986543 2221100   0112111 0011111345667788999


Q ss_pred             EEEcc
Q 035965           83 VFHVA   87 (348)
Q Consensus        83 Vih~a   87 (348)
                      ||-+.
T Consensus       103 VilaV  107 (356)
T 3k96_A          103 ILIVV  107 (356)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            99764

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.83  E-value=0.0037  Score=54.44  Aligned_cols=84  Identities=14%  Similarity=-0.006  Sum_probs=56.5

Q ss_pred             cCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeE-EEEccCCCcchHHHhhcCCCEE
Q 035965            6 ESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLR-LFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus         6 ~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      +....+++++|.|++..+|+.+++.|+..|.+|++++|+..+. .......  .... ......++.+++.+.+.++|+|
T Consensus       172 g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la--~~~~~~t~~~~t~~~~L~e~l~~ADIV  249 (320)
T 1edz_A          172 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK--LNKHHVEDLGEYSEDLLKKCSLDSDVV  249 (320)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS--CCCCEEEEEEECCHHHHHHHHHHCSEE
T ss_pred             CCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh--hhcccccccccccHhHHHHHhccCCEE
Confidence            3356789999999988899999999999999999998874332 1110000  0111 1111113336788888899999


Q ss_pred             EEccccCc
Q 035965           84 FHVAASME   91 (348)
Q Consensus        84 ih~a~~~~   91 (348)
                      |-+.+...
T Consensus       250 IsAtg~p~  257 (320)
T 1edz_A          250 ITGVPSEN  257 (320)
T ss_dssp             EECCCCTT
T ss_pred             EECCCCCc
Confidence            99888643

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=96.82  E-value=0.0056  Score=54.86  Aligned_cols=36  Identities=28%  Similarity=0.338  Sum_probs=26.3

Q ss_pred             cCCCCCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEE
Q 035965            6 ESTGRSKTFCVTGANGYIGSWLVKTLLERG-YIVHAT   41 (348)
Q Consensus         6 ~~~~~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~   41 (348)
                      ...|+++||.|.||||++|..|++.|.+.- .++..+
T Consensus        14 ~~~M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l   50 (381)
T 3hsk_A           14 GSHMSVKKAGVLGATGSVGQRFILLLSKHPEFEIHAL   50 (381)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEE
T ss_pred             cccCCccEEEEECCCChHHHHHHHHHHcCCCceEEEe
Confidence            345667899999999999999999887654 366554

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.80  E-value=0.00098  Score=61.39  Aligned_cols=77  Identities=25%  Similarity=0.274  Sum_probs=49.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccccc--CCCCCeE-EE-----EccCCCcchHHHhhcCCCE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKW--TRSDRLR-LF-----QADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~--~~~~~~~-~~-----~~Dl~d~~~~~~~~~~~d~   82 (348)
                      |+|.|.| +|.+|..++..|++.|++|++++|++.+. .+....  -..++.+ .+     .+.+....++.++++++|+
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv   79 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence            4799998 59999999999999999999999987654 222210  0000000 00     0111112345556778999


Q ss_pred             EEEcccc
Q 035965           83 VFHVAAS   89 (348)
Q Consensus        83 Vih~a~~   89 (348)
                      ||-+...
T Consensus        80 viiaVpt   86 (436)
T 1mv8_A           80 SFICVGT   86 (436)
T ss_dssp             EEECCCC
T ss_pred             EEEEcCC
Confidence            9998864

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=96.79  E-value=0.0053  Score=55.52  Aligned_cols=74  Identities=12%  Similarity=0.036  Sum_probs=54.9

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVF   84 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vi   84 (348)
                      +..++|+|+|+|+ |.+|..+++.+.+.|++|++++..+..... ..     .-+++..|..|.+.+.++++  ++|+|+
T Consensus         7 m~~~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~-~~-----~d~~~~~~~~d~~~l~~~~~~~~~d~v~   79 (391)
T 1kjq_A            7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM-HV-----AHRSHVINMLDGDALRRVVELEKPHYIV   79 (391)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG-GG-----SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchh-hh-----ccceEECCCCCHHHHHHHHHHcCCCEEE
Confidence            3445789999987 899999999999999999999876543211 10     12456778888888877765  799998


Q ss_pred             Ecc
Q 035965           85 HVA   87 (348)
Q Consensus        85 h~a   87 (348)
                      ...
T Consensus        80 ~~~   82 (391)
T 1kjq_A           80 PEI   82 (391)
T ss_dssp             ECS
T ss_pred             ECC
Confidence            643

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.79  E-value=0.0063  Score=52.45  Aligned_cols=36  Identities=22%  Similarity=0.199  Sum_probs=30.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDP   45 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~   45 (348)
                      .+..+|+|.|+ |-+|++++++|+..|. +++++|.+.
T Consensus        34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            34679999997 9999999999999995 788888764

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.78  E-value=0.0042  Score=57.47  Aligned_cols=72  Identities=19%  Similarity=0.296  Sum_probs=57.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a   87 (348)
                      .++|+|.|| |-+|.+|++.| +++++|.++.++..+. .+...   .++..++.||-+|.+-+.+. ++++|+++-+-
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~---l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T  308 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEE---LENTIVFCGDAADQELLTEENIDQVDVFIALT  308 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHH---CTTSEEEESCTTCHHHHHHTTGGGCSEEEECC
T ss_pred             ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHH---CCCceEEeccccchhhHhhcCchhhcEEEEcc
Confidence            468999997 99999999997 5679999999987766 33322   25788999999999988765 67899999664

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=96.77  E-value=0.0022  Score=58.60  Aligned_cols=79  Identities=19%  Similarity=0.204  Sum_probs=50.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccccc--CCCCCeE-E-----EEccCCCcchHHHhhcCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKW--TRSDRLR-L-----FQADLQVEGSFDKAVMGC   80 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~--~~~~~~~-~-----~~~Dl~d~~~~~~~~~~~   80 (348)
                      .|.+|.|.| .|++|..++..|++.|++|+++|.++.+. .+.+-.  -..++++ .     -.+.++-..+..+++..+
T Consensus        20 ~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~a   98 (444)
T 3vtf_A           20 HMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAAT   98 (444)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTS
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcC
Confidence            578999998 59999999999999999999999987655 322210  0001100 0     001111112345566788


Q ss_pred             CEEEEcccc
Q 035965           81 DGVFHVAAS   89 (348)
Q Consensus        81 d~Vih~a~~   89 (348)
                      |++|-+.+.
T Consensus        99 d~~~I~VpT  107 (444)
T 3vtf_A           99 DATFIAVGT  107 (444)
T ss_dssp             SEEEECCCC
T ss_pred             CceEEEecC
Confidence            999988764

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.77  E-value=0.0055  Score=51.47  Aligned_cols=71  Identities=15%  Similarity=0.198  Sum_probs=47.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-----CCCEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-----GCDGVF   84 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~Vi   84 (348)
                      +||+|.|++|-+|+.+++.+.+. ++++.++.....+. ....     ...+ +..|.+.++...+.++     +.++|+
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-----~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~Vi   74 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-----GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVV   74 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-----TTCC-EEEECSCTTTHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-----cCCc-EEEEccChHHHHHHHHHHHHcCCCEEE
Confidence            48999999999999999999866 89998776543322 1111     0222 6677777776654332     567777


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      -..|
T Consensus        75 gTTG   78 (245)
T 1p9l_A           75 GTTG   78 (245)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            5544

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.77  E-value=0.0012  Score=59.00  Aligned_cols=67  Identities=13%  Similarity=0.091  Sum_probs=46.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCC---CEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGC---DGVF   84 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---d~Vi   84 (348)
                      +++|+|.|+| .|.+|..+++.|++.|++|++.+|++.+. .+...     ++.       ...++.++++.+   |+||
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~-----g~~-------~~~s~~e~~~~a~~~DvVi   86 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALERE-----GIA-------GARSIEEFCAKLVKPRVVW   86 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-----TCB-------CCSSHHHHHHHSCSSCEEE
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-----CCE-------EeCCHHHHHhcCCCCCEEE
Confidence            3458999999 59999999999999999999999987654 33221     111       122344444444   9998


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      -+..
T Consensus        87 ~~vp   90 (358)
T 4e21_A           87 LMVP   90 (358)
T ss_dssp             ECSC
T ss_pred             EeCC
Confidence            8764

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.76  E-value=0.0011  Score=60.38  Aligned_cols=77  Identities=14%  Similarity=0.130  Sum_probs=48.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC--CCCCeE-EE---EccCCCcchHHHhhcCCCE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT--RSDRLR-LF---QADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~--~~~~~~-~~---~~Dl~d~~~~~~~~~~~d~   82 (348)
                      .+|+|.|.|+ |++|..++..|++ |++|+++++++.+. .+.....  ..++++ ++   ...+.-..++.++++++|+
T Consensus        35 ~~mkIaVIGl-G~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDv  112 (432)
T 3pid_A           35 EFMKITISGT-GYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADY  112 (432)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCE
Confidence            3579999995 9999999999887 99999999987654 2222100  000000 00   0011112345667788999


Q ss_pred             EEEccc
Q 035965           83 VFHVAA   88 (348)
Q Consensus        83 Vih~a~   88 (348)
                      ||-+..
T Consensus       113 ViiaVP  118 (432)
T 3pid_A          113 VIIATP  118 (432)
T ss_dssp             EEECCC
T ss_pred             EEEeCC
Confidence            998754

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.76  E-value=0.0049  Score=52.57  Aligned_cols=58  Identities=16%  Similarity=0.111  Sum_probs=48.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++++|.|+++.+|+.++..|+..|.+|+++.+..                         ..+.+.++.+|+||.+.
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------------------~~L~~~~~~ADIVI~Av  212 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT-------------------------TDLKSHTTKADILIVAV  212 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------------------SSHHHHHTTCSEEEECC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------------------hhHHHhcccCCEEEECC
Confidence            45789999999999999999999999999998887642                         14667788999999998


Q ss_pred             ccC
Q 035965           88 ASM   90 (348)
Q Consensus        88 ~~~   90 (348)
                      +..
T Consensus       213 g~p  215 (285)
T 3l07_A          213 GKP  215 (285)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            753

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.76  E-value=0.0022  Score=55.20  Aligned_cols=73  Identities=16%  Similarity=0.146  Sum_probs=49.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ....++++|+|+ |.+|+.++..|.+.|. +|++++|+..+. .+.........+...  ++.+      +..++|+||+
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~~~------l~~~aDiIIn  193 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AFEQ------LKQSYDVIIN  193 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EGGG------CCSCEEEEEE
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eHHH------hcCCCCEEEE
Confidence            346789999997 8899999999999996 999999987655 332211111123333  2222      1257899999


Q ss_pred             cccc
Q 035965           86 VAAS   89 (348)
Q Consensus        86 ~a~~   89 (348)
                      +...
T Consensus       194 aTp~  197 (281)
T 3o8q_A          194 STSA  197 (281)
T ss_dssp             CSCC
T ss_pred             cCcC
Confidence            8764

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.75  E-value=0.011  Score=52.93  Aligned_cols=69  Identities=14%  Similarity=0.007  Sum_probs=41.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHH-CCC---eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLE-RGY---IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~-~g~---~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      |+||.|.||+|++|+.|++.|+. +++   +++.+..+ +.. ......    +.+....|..+++.+    +++|+||-
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~-s~G~~v~~~~----g~~i~~~~~~~~~~~----~~~DvVf~   71 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS-QLGQAAPSFG----GTTGTLQDAFDLEAL----KALDIIVT   71 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-STTSBCCGGG----TCCCBCEETTCHHHH----HTCSEEEE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC-CCCCCccccC----CCceEEEecCChHHh----cCCCEEEE
Confidence            46899999999999999995554 443   45555544 221 111110    112222334444333    58999998


Q ss_pred             ccc
Q 035965           86 VAA   88 (348)
Q Consensus        86 ~a~   88 (348)
                      +.+
T Consensus        72 a~g   74 (367)
T 1t4b_A           72 CQG   74 (367)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            876

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.75  E-value=0.0009  Score=58.46  Aligned_cols=68  Identities=15%  Similarity=0.140  Sum_probs=46.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      .++|+|.|.|. |.+|+.+++.|++.|++|++.+|++.+. .+...     +......      ++.++++++|+||-+.
T Consensus         5 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-----g~~~~~~------~~~e~~~~aDvvi~~v   72 (303)
T 3g0o_A            5 GTDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAE-----GACGAAA------SAREFAGVVDALVILV   72 (303)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-----TCSEEES------SSTTTTTTCSEEEECC
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc-----CCccccC------CHHHHHhcCCEEEEEC
Confidence            34578999985 9999999999999999999999987654 32221     2221122      2334556788888775


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      .
T Consensus        73 p   73 (303)
T 3g0o_A           73 V   73 (303)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.74  E-value=0.0009  Score=57.94  Aligned_cols=65  Identities=23%  Similarity=0.333  Sum_probs=48.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ||+|.|.| .|.+|+.+++.|++.|++|++.+|++.+. .+...     ++..       ..+..++++++|+||-+..
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-----g~~~-------~~~~~~~~~~advvi~~v~   66 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL-----GARQ-------ASSPAEVCAACDITIAMLA   66 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH-----TCEE-------CSCHHHHHHHCSEEEECCS
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-----CCee-------cCCHHHHHHcCCEEEEEcC
Confidence            46899998 59999999999999999999999988765 33221     2221       1245666677899988764

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.74  E-value=0.0015  Score=58.09  Aligned_cols=71  Identities=21%  Similarity=0.251  Sum_probs=48.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcc---hHHHhh--cCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG---SFDKAV--MGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~--~~~d~Vi   84 (348)
                      .+.+|||+||+|-||..+++.+...|.+|+++ +++.+....+..    +...  .| .+.+   .+.+..  .++|+||
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l----Ga~~--i~-~~~~~~~~~~~~~~~~g~D~vi  221 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL----GATP--ID-ASREPEDYAAEHTAGQGFDLVY  221 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH----TSEE--EE-TTSCHHHHHHHHHTTSCEEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc----CCCE--ec-cCCCHHHHHHHHhcCCCceEEE
Confidence            35789999999999999999999999999998 655444222211    2333  33 3222   222222  2699999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      ++++
T Consensus       222 d~~g  225 (343)
T 3gaz_A          222 DTLG  225 (343)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9987

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.73  E-value=0.0034  Score=58.09  Aligned_cols=36  Identities=22%  Similarity=0.272  Sum_probs=33.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHC-CC-eEEEEEcCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLER-GY-IVHATVRDPG   46 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~-g~-~V~~~~r~~~   46 (348)
                      .+|||.|.|+ |++|..++..|++. |+ +|+++++++.
T Consensus        17 ~~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           17 PIKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             SCCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            4579999995 99999999999999 99 9999999987

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=96.73  E-value=0.0086  Score=57.04  Aligned_cols=68  Identities=15%  Similarity=0.113  Sum_probs=57.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a~   88 (348)
                      ++|+|.|+ |-+|.++++.|.+.|++|++++.++......        ..++.+|.+|.+.+.++ ++++|.+|-+.+
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~--------~~~i~gD~t~~~~L~~agi~~ad~vi~~~~  417 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCND--------HVVVYGDATVGQTLRQAGIDRASGIIVTTN  417 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCS--------SCEEESCSSSSTHHHHHTTTSCSEEEECCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhc--------CCEEEeCCCCHHHHHhcCccccCEEEEECC
Confidence            78999998 9999999999999999999999988654211        16899999999998876 678999987654

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.72  E-value=0.0044  Score=53.21  Aligned_cols=58  Identities=16%  Similarity=0.116  Sum_probs=48.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHH--HhhcCCCEEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFD--KAVMGCDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~--~~~~~~d~Vih   85 (348)
                      ...+++++|.|++|.+|+.++..|+..|.+|+++.|+..                         ++.  +.++.+|+||.
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~-------------------------~l~l~~~~~~ADIVI~  216 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS-------------------------TEDMIDYLRTADIVIA  216 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC-------------------------HHHHHHHHHTCSEEEE
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC-------------------------CchhhhhhccCCEEEE
Confidence            457899999999999999999999999999999987431                         234  77889999999


Q ss_pred             ccccC
Q 035965           86 VAASM   90 (348)
Q Consensus        86 ~a~~~   90 (348)
                      +.+..
T Consensus       217 Avg~p  221 (300)
T 4a26_A          217 AMGQP  221 (300)
T ss_dssp             CSCCT
T ss_pred             CCCCC
Confidence            98853

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.71  E-value=0.0016  Score=57.81  Aligned_cols=72  Identities=19%  Similarity=0.147  Sum_probs=50.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcc---hHHHhhcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG---SFDKAVMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~d~Vih~a   87 (348)
                      +++|||+|| |-+|..+++.+...|.+|+++++++.+....+..    +.+. ..|..+.+   .+.++..++|+||+++
T Consensus       165 g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~~-~~d~~~~~~~~~~~~~~~~~d~vid~~  238 (339)
T 1rjw_A          165 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL----GADL-VVNPLKEDAAKFMKEKVGGVHAAVVTA  238 (339)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TCSE-EECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHC----CCCE-EecCCCccHHHHHHHHhCCCCEEEECC
Confidence            578999999 7799999999999999999999877654222211    2222 24655433   2222225799999998


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      +
T Consensus       239 g  239 (339)
T 1rjw_A          239 V  239 (339)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.71  E-value=0.0017  Score=54.76  Aligned_cols=39  Identities=26%  Similarity=0.335  Sum_probs=33.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK   47 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~   47 (348)
                      .+++++|.|.| +|.+|+.+++.|++.|++|++.+|++.+
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            45678999998 5999999999999999999999998764

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.71  E-value=0.001  Score=51.93  Aligned_cols=70  Identities=14%  Similarity=0.022  Sum_probs=48.5

Q ss_pred             CChhHHHHHHHHHHCCCeEEEEEcCCCcc-cc---cc-ccCCCCCeEEEEccCCCc--chHHHhhc------CCCEEEEc
Q 035965           20 NGYIGSWLVKTLLERGYIVHATVRDPGKL-QI---FS-KWTRSDRLRLFQADLQVE--GSFDKAVM------GCDGVFHV   86 (348)
Q Consensus        20 tGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~---~~-~~~~~~~~~~~~~Dl~d~--~~~~~~~~------~~d~Vih~   86 (348)
                      +|.++...++.|.+.|.+|++..|..... ..   .. .......+..+.+|++++  +++.++++      +-|++|||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnn  104 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHC  104 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEEC
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence            36789999999999999999888765432 11   11 111123456677899998  77766543      23999999


Q ss_pred             ccc
Q 035965           87 AAS   89 (348)
Q Consensus        87 a~~   89 (348)
                      ||.
T Consensus       105 Agg  107 (157)
T 3gxh_A          105 LAN  107 (157)
T ss_dssp             SBS
T ss_pred             CCC
Confidence            985

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.71  E-value=0.00095  Score=58.09  Aligned_cols=65  Identities=18%  Similarity=0.354  Sum_probs=46.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      +|+|.|.| +|.+|+.++..|.+.|++|++++|++.+. .+...     ++..       ..++.++++++|+||-+..
T Consensus         5 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-----g~~~-------~~~~~~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            5 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-----GAET-------ASTAKAIAEQCDVIITMLP   70 (299)
T ss_dssp             -CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-----TCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             cceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-----CCee-------cCCHHHHHhCCCEEEEECC
Confidence            46899999 59999999999999999999999976544 22211     2221       1234556667899998864

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.71  E-value=0.0019  Score=55.22  Aligned_cols=73  Identities=19%  Similarity=0.214  Sum_probs=50.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ...+++++|+|+ |.+|+.++..|.+.|. +|++++|+..+. .+...... ..+...  ++.+   +..  .++|+||+
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~~~~~~--~~~~---l~~--~~~DivIn  187 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-SRLRIS--RYEA---LEG--QSFDIVVN  187 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-TTEEEE--CSGG---GTT--CCCSEEEE
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-CCeeEe--eHHH---hcc--cCCCEEEE
Confidence            456789999997 8999999999999995 999999987665 33322111 123332  2222   211  57999999


Q ss_pred             cccc
Q 035965           86 VAAS   89 (348)
Q Consensus        86 ~a~~   89 (348)
                      +...
T Consensus       188 aTp~  191 (272)
T 3pwz_A          188 ATSA  191 (272)
T ss_dssp             CSSG
T ss_pred             CCCC
Confidence            8754

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.70  E-value=0.0016  Score=56.32  Aligned_cols=64  Identities=25%  Similarity=0.339  Sum_probs=48.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |+|.|.|. |.+|+.+++.|.+.|++|++.+|++.+. .+...     ++..       ..++.++++++|+||-+..
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-----g~~~-------~~~~~~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL-----GAER-------AATPCEVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-----TCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-----CCee-------cCCHHHHHhcCCEEEEEcC
Confidence            68999995 9999999999999999999999987765 33221     2221       2345666777899987753

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.69  E-value=0.0017  Score=57.17  Aligned_cols=66  Identities=18%  Similarity=0.273  Sum_probs=49.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ++|+|.|.|. |.+|+.+++.|++.|++|++.+|++.+. .+...     ++..       ..++.++++++|+||-+..
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~-----g~~~-------~~~~~e~~~~aDvVi~~vp   96 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAAL-----GATI-------HEQARAAARDADIVVSMLE   96 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-----TCEE-------ESSHHHHHTTCSEEEECCS
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC-----CCEe-------eCCHHHHHhcCCEEEEECC
Confidence            4679999985 9999999999999999999999987654 33221     2221       2356677888999997753

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=96.69  E-value=0.013  Score=44.82  Aligned_cols=33  Identities=30%  Similarity=0.342  Sum_probs=28.5

Q ss_pred             CCeEEEeCCC---ChhHHHHHHHHHHCCCeEEEEEc
Q 035965           11 SKTFCVTGAN---GYIGSWLVKTLLERGYIVHATVR   43 (348)
Q Consensus        11 ~~~ilVtGat---GfiG~~l~~~L~~~g~~V~~~~r   43 (348)
                      +++|+|.|++   |-+|..+++.|.+.|++|+.++.
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp   57 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNP   57 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECC
Confidence            5789999998   89999999999999998665543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.68  E-value=0.0053  Score=52.29  Aligned_cols=58  Identities=24%  Similarity=0.179  Sum_probs=48.5

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ....+++++|.|++|.+|+.++..|+..|.+|+++.+..                         .++.+.++.+|+||.+
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T-------------------------~~L~~~~~~ADIVI~A  211 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT-------------------------RDLADHVSRADLVVVA  211 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC-------------------------SCHHHHHHTCSEEEEC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC-------------------------cCHHHHhccCCEEEEC
Confidence            345789999999999999999999999999999887632                         1356777889999999


Q ss_pred             ccc
Q 035965           87 AAS   89 (348)
Q Consensus        87 a~~   89 (348)
                      .+.
T Consensus       212 vg~  214 (286)
T 4a5o_A          212 AGK  214 (286)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            874

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.67  E-value=0.0048  Score=55.55  Aligned_cols=74  Identities=14%  Similarity=0.142  Sum_probs=49.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhh--cCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAV--MGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~Vih~a   87 (348)
                      .+.+|||+||+|-||..+++.+...|.+|+++++ +.+....+..    +.+. ..|..+.+....+.  .++|+||+++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~l----Ga~~-v~~~~~~~~~~~~~~~~g~D~vid~~  256 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKL----GADD-VIDYKSGSVEEQLKSLKPFDFILDNV  256 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHT----TCSE-EEETTSSCHHHHHHTSCCBSEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHc----CCCE-EEECCchHHHHHHhhcCCCCEEEECC
Confidence            3579999999999999999999999999998884 3333222211    2221 23444433333332  3699999998


Q ss_pred             cc
Q 035965           88 AS   89 (348)
Q Consensus        88 ~~   89 (348)
                      +.
T Consensus       257 g~  258 (375)
T 2vn8_A          257 GG  258 (375)
T ss_dssp             CT
T ss_pred             CC
Confidence            73

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.65  E-value=0.002  Score=56.51  Aligned_cols=69  Identities=16%  Similarity=0.216  Sum_probs=48.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-ccccccCCCCCe-EEEEccCCCcchHHH-hhcCCCE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-QIFSKWTRSDRL-RLFQADLQVEGSFDK-AVMGCDG   82 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-~~~~~~~~~~~~-~~~~~Dl~d~~~~~~-~~~~~d~   82 (348)
                      .+++|+|.|.| .|-+|+.+++.|.+.|+  +|++++|++.+. .....     ++ .....      ++.+ +++++|+
T Consensus        30 ~~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-----G~~~~~~~------~~~~~~~~~aDv   97 (314)
T 3ggo_A           30 SLSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-----GIIDEGTT------SIAKVEDFSPDF   97 (314)
T ss_dssp             CCSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-----TSCSEEES------CTTGGGGGCCSE
T ss_pred             hcCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-----CCcchhcC------CHHHHhhccCCE
Confidence            34558999999 69999999999999999  999999987544 22211     11 11111      2334 5678999


Q ss_pred             EEEccc
Q 035965           83 VFHVAA   88 (348)
Q Consensus        83 Vih~a~   88 (348)
                      ||-+..
T Consensus        98 Vilavp  103 (314)
T 3ggo_A           98 VMLSSP  103 (314)
T ss_dssp             EEECSC
T ss_pred             EEEeCC
Confidence            998764

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.64  E-value=0.0041  Score=54.15  Aligned_cols=71  Identities=23%  Similarity=0.248  Sum_probs=53.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ...+++|+|.|+ |-+|+.+++.|...|.+|++.+|++.+. .....     +++.+.     ..++.++++++|+|+.+
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~-----g~~~~~-----~~~l~~~l~~aDvVi~~  222 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEM-----GLVPFH-----TDELKEHVKDIDICINT  222 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-----TCEEEE-----GGGHHHHSTTCSEEEEC
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-----CCeEEc-----hhhHHHHhhCCCEEEEC
Confidence            456789999996 9999999999999999999999986543 22111     233221     24577788899999998


Q ss_pred             ccc
Q 035965           87 AAS   89 (348)
Q Consensus        87 a~~   89 (348)
                      ...
T Consensus       223 ~p~  225 (300)
T 2rir_A          223 IPS  225 (300)
T ss_dssp             CSS
T ss_pred             CCh
Confidence            764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.64  E-value=0.0022  Score=58.37  Aligned_cols=71  Identities=23%  Similarity=0.226  Sum_probs=52.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ..+++|+|+|+ |-+|..+++.|...|. +|++++|+..+. .+....    +.+.  .   +.+++.+.+.++|+||.+
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~----g~~~--~---~~~~l~~~l~~aDvVi~a  234 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----GGEA--V---RFDELVDHLARSDVVVSA  234 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----TCEE--C---CGGGHHHHHHTCSEEEEC
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----CCce--e---cHHhHHHHhcCCCEEEEc
Confidence            45789999998 9999999999999998 999999987654 222211    2221  1   223566777899999999


Q ss_pred             ccc
Q 035965           87 AAS   89 (348)
Q Consensus        87 a~~   89 (348)
                      .+.
T Consensus       235 t~~  237 (404)
T 1gpj_A          235 TAA  237 (404)
T ss_dssp             CSS
T ss_pred             cCC
Confidence            753

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.63  E-value=0.002  Score=57.56  Aligned_cols=74  Identities=19%  Similarity=0.158  Sum_probs=53.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccC------------------CCc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADL------------------QVE   70 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl------------------~d~   70 (348)
                      .+.+|+|+|+ |-+|...++.|...|.+|++++|++.+. .....     +.+++..|.                  .+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l-----Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~  256 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV-----GAQWLDLGIDAAGEGGYARELSEAERAQQQ  256 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT-----TCEECCCC-------------CHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-----CCeEEeccccccccccchhhhhHHHHhhhH
Confidence            4579999998 9999999999999999999999988654 33222     233333221                  123


Q ss_pred             chHHHhhcCCCEEEEcccc
Q 035965           71 GSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        71 ~~~~~~~~~~d~Vih~a~~   89 (348)
                      +.+.++++++|+||.++..
T Consensus       257 ~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          257 QALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHTTCSEEEECCCC
T ss_pred             HHHHHHHhcCCEEEECCCC
Confidence            4567788899999988644

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.62  E-value=0.0029  Score=54.53  Aligned_cols=66  Identities=20%  Similarity=0.261  Sum_probs=49.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC---eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY---IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~---~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ++|+|.|.|+ |-+|+.+++.|++.|+   +|++.+|++.+. .+....    ++..       ..+..++++++|+||-
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~----gi~~-------~~~~~~~~~~aDvVil   69 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC----GVHT-------TQDNRQGALNADVVVL   69 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT----CCEE-------ESCHHHHHSSCSEEEE
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc----CCEE-------eCChHHHHhcCCeEEE
Confidence            4578999997 9999999999999998   899999987655 333211    2322       1234566788999998


Q ss_pred             cc
Q 035965           86 VA   87 (348)
Q Consensus        86 ~a   87 (348)
                      +.
T Consensus        70 av   71 (280)
T 3tri_A           70 AV   71 (280)
T ss_dssp             CS
T ss_pred             Ee
Confidence            86

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.61  E-value=0.0029  Score=55.60  Aligned_cols=35  Identities=17%  Similarity=-0.028  Sum_probs=32.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDP   45 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~   45 (348)
                      |+|+|.|.| .|.+|+.++..|++.| ++|++.+|++
T Consensus        23 M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           23 MMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             cCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            567999999 5999999999999999 9999999986

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.60  E-value=0.0045  Score=53.70  Aligned_cols=70  Identities=17%  Similarity=0.204  Sum_probs=52.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ...+++|+|.|+ |-+|+.+++.|...|.+|++++|++.+. .....     +++++     +.+++.++++++|+|+.+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-----g~~~~-----~~~~l~~~l~~aDvVi~~  220 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEM-----GMEPF-----HISKAAQELRDVDVCINT  220 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-----TSEEE-----EGGGHHHHTTTCSEEEEC
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-----CCeec-----ChhhHHHHhcCCCEEEEC
Confidence            456789999995 9999999999999999999999986543 22111     23332     124577788899999988


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      ..
T Consensus       221 ~p  222 (293)
T 3d4o_A          221 IP  222 (293)
T ss_dssp             CS
T ss_pred             CC
Confidence            74

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.59  E-value=0.0035  Score=54.46  Aligned_cols=66  Identities=24%  Similarity=0.238  Sum_probs=43.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |.+||-++| .|.+|..+++.|++.||+|++.+|++.+. .+...     +...       .++..++++.+|+||-+..
T Consensus         4 Ms~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-----G~~~-------~~s~~e~~~~~dvvi~~l~   70 (297)
T 4gbj_A            4 MSEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKL-----GATV-------VENAIDAITPGGIVFSVLA   70 (297)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTTT-----TCEE-------CSSGGGGCCTTCEEEECCS
T ss_pred             CCCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc-----CCeE-------eCCHHHHHhcCCceeeecc
Confidence            346899998 59999999999999999999999988765 33321     2221       1245567778899987654

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.59  E-value=0.0088  Score=50.54  Aligned_cols=77  Identities=17%  Similarity=0.167  Sum_probs=49.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cccccc--------------------CCCCCe--EEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKW--------------------TRSDRL--RLFQA   65 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~--------------------~~~~~~--~~~~~   65 (348)
                      +.++|+|.|+ |.+|+++++.|+..|. ++++++++.-.. .+.+..                    ...+.+  +.+..
T Consensus        27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  105 (251)
T 1zud_1           27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ  105 (251)
T ss_dssp             HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence            3579999997 7799999999999996 778887653211 111100                    001233  33333


Q ss_pred             cCCCcchHHHhhcCCCEEEEccc
Q 035965           66 DLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        66 Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ++. .+.+.++++++|+||.+..
T Consensus       106 ~~~-~~~~~~~~~~~DvVi~~~d  127 (251)
T 1zud_1          106 RLT-GEALKDAVARADVVLDCTD  127 (251)
T ss_dssp             CCC-HHHHHHHHHHCSEEEECCS
T ss_pred             cCC-HHHHHHHHhcCCEEEECCC
Confidence            343 3456677788999998743

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=96.55  E-value=0.0028  Score=58.91  Aligned_cols=37  Identities=19%  Similarity=0.364  Sum_probs=32.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCCCcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDPGKL   48 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~~~~   48 (348)
                      ||+|.|.| +|.+|..++..|++.  |++|++++|++.+.
T Consensus         5 ~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~   43 (467)
T 2q3e_A            5 IKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVNESRI   43 (467)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHH
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence            57899999 599999999999999  89999999987654

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.55  E-value=0.0027  Score=56.88  Aligned_cols=73  Identities=21%  Similarity=0.007  Sum_probs=50.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCc-chHHHhhcCCCEEEEcccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVE-GSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~d~Vih~a~~   89 (348)
                      +.+|||+|+ |-+|..+++.+...|.+|+++++++.+..+.+..    +... ..|..+. +....+..++|+||++++.
T Consensus       180 g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~l----Ga~~-v~~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          180 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKM----GADH-YIATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCSE-EEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc----CCCE-EEcCcCchHHHHHhhcCCCEEEECCCC
Confidence            578999999 9999999999888899999999987765222211    1221 1343333 3233333579999999875

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.55  E-value=0.0019  Score=56.90  Aligned_cols=73  Identities=11%  Similarity=0.130  Sum_probs=51.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      .+.+|+|+||+|-+|...++.+...|.+|+++++... ..+.+..    +.+ ...|..+.+.+.+.++++|+||++++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~~~~~~l----Ga~-~~i~~~~~~~~~~~~~g~D~v~d~~g  224 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN-HAFLKAL----GAE-QCINYHEEDFLLAISTPVDAVIDLVG  224 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH-HHHHHHH----TCS-EEEETTTSCHHHHCCSCEEEEEESSC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch-HHHHHHc----CCC-EEEeCCCcchhhhhccCCCEEEECCC
Confidence            3578999999999999999999999999998885432 2211111    222 12455554446666788999999987

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.54  E-value=0.002  Score=57.37  Aligned_cols=73  Identities=16%  Similarity=0.103  Sum_probs=49.7

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCeEEEEccCCCcch---HHHhhc--CCCEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGS---FDKAVM--GCDGV   83 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~--~~d~V   83 (348)
                      .+.+|||+|+ |.+|..+++.+...|. +|+++++++.+..+.+..    +... ..|..+.+.   +.++..  ++|+|
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga~~-~~~~~~~~~~~~v~~~~~g~g~D~v  240 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GADY-VINPFEEDVVKEVMDITDGNGVDVF  240 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TCSE-EECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCCE-EECCCCcCHHHHHHHHcCCCCCCEE
Confidence            4578999999 9999999999999999 999999986554222211    2221 234444332   222222  68999


Q ss_pred             EEccc
Q 035965           84 FHVAA   88 (348)
Q Consensus        84 ih~a~   88 (348)
                      |++++
T Consensus       241 id~~g  245 (348)
T 2d8a_A          241 LEFSG  245 (348)
T ss_dssp             EECSC
T ss_pred             EECCC
Confidence            99987

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.54  E-value=0.0046  Score=52.43  Aligned_cols=56  Identities=16%  Similarity=0.153  Sum_probs=47.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ..+++++|.|+++.+|+.++..|+..|.+|+++.++.                         .++.+.++.+|+||.+.+
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t-------------------------~~L~~~~~~ADIVI~Avg  202 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT-------------------------KDIGSMTRSSKIVVVAVG  202 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------------------SCHHHHHHHSSEEEECSS
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc-------------------------ccHHHhhccCCEEEECCC
Confidence            5689999999999999999999999999999987632                         245677778999999987


Q ss_pred             c
Q 035965           89 S   89 (348)
Q Consensus        89 ~   89 (348)
                      .
T Consensus       203 ~  203 (276)
T 3ngx_A          203 R  203 (276)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.51  E-value=0.0047  Score=55.32  Aligned_cols=71  Identities=17%  Similarity=0.138  Sum_probs=48.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcch----HHHhhc--CCCEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGS----FDKAVM--GCDGVF   84 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~----~~~~~~--~~d~Vi   84 (348)
                      +.+|||+| +|-+|...++.+...|.+|+++++++.+..+.+..    +.+.+ .| .+.++    +.++..  ++|+||
T Consensus       190 g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~~v-i~-~~~~~~~~~v~~~~~g~g~D~vi  262 (363)
T 3uog_A          190 GDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL----GADHG-IN-RLEEDWVERVYALTGDRGADHIL  262 (363)
T ss_dssp             TCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCSEE-EE-TTTSCHHHHHHHHHTTCCEEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc----CCCEE-Ec-CCcccHHHHHHHHhCCCCceEEE
Confidence            57899999 89999999999999999999999876655222211    22211 23 22222    333332  699999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      ++++
T Consensus       263 d~~g  266 (363)
T 3uog_A          263 EIAG  266 (363)
T ss_dssp             EETT
T ss_pred             ECCC
Confidence            9987

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.50  E-value=0.0042  Score=54.39  Aligned_cols=67  Identities=15%  Similarity=0.111  Sum_probs=46.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCC--CccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDP--GKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      .+|+|.|.|. |.+|+.+++.|++.|+ +|++.+|++  .+......    .++..       ..+..++++++|+||-+
T Consensus        23 ~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~----~g~~~-------~~~~~e~~~~aDvVi~~   90 (312)
T 3qsg_A           23 NAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEE----LGVSC-------KASVAEVAGECDVIFSL   90 (312)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHH----TTCEE-------CSCHHHHHHHCSEEEEC
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHH----CCCEE-------eCCHHHHHhcCCEEEEe
Confidence            4679999995 9999999999999999 999999973  32221111    12221       12455667788999987


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      ..
T Consensus        91 vp   92 (312)
T 3qsg_A           91 VT   92 (312)
T ss_dssp             SC
T ss_pred             cC
Confidence            64

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=96.50  E-value=0.0026  Score=59.11  Aligned_cols=38  Identities=24%  Similarity=0.252  Sum_probs=33.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      ..|+|.|.|+ |++|..++..|++.|++|+++++++.+.
T Consensus         7 ~~~~I~VIG~-G~vG~~lA~~la~~G~~V~~~d~~~~~v   44 (478)
T 2y0c_A            7 GSMNLTIIGS-GSVGLVTGACLADIGHDVFCLDVDQAKI   44 (478)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCceEEEECc-CHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            3579999995 9999999999999999999999987654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.50  E-value=0.0056  Score=55.14  Aligned_cols=75  Identities=21%  Similarity=0.186  Sum_probs=54.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEcc----------------CCC---
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQAD----------------LQV---   69 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~D----------------l~d---   69 (348)
                      .+.+|+|+|+ |-+|...++.|...|.+|+++++++.+. .....     +.+++..+                +++   
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~-----G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~  262 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASL-----GAKFIAVEDEEFKAAETAGGYAKEMSGEYQ  262 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT-----TCEECCCCC-----------------CHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-----CCceeecccccccccccccchhhhcchhhh
Confidence            3579999998 9999999999999999999999988754 22221     22332222                222   


Q ss_pred             ---cchHHHhhcCCCEEEEccccC
Q 035965           70 ---EGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        70 ---~~~~~~~~~~~d~Vih~a~~~   90 (348)
                         .+.+.++++++|+||.++...
T Consensus       263 ~~~~~~l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          263 VKQAALVAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             HHHHHHHHHHHHTCSEEEECCCCS
T ss_pred             hhhHhHHHHHhcCCCEEEECCcCC
Confidence               246778888999999987544

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=96.49  E-value=0.007  Score=55.62  Aligned_cols=78  Identities=19%  Similarity=0.241  Sum_probs=51.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccC--CCCCeEE------EEccCCCcchHHHhhcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWT--RSDRLRL------FQADLQVEGSFDKAVMGCD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~--~~~~~~~------~~~Dl~d~~~~~~~~~~~d   81 (348)
                      .-+|.|.|. |++|..++..|++.||+|++.+|++.+. .+.....  ..++++-      ..+.+.-..++.++++++|
T Consensus         8 ~~~~~vIGl-G~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD   86 (446)
T 4a7p_A            8 SVRIAMIGT-GYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD   86 (446)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred             ceEEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence            458999995 9999999999999999999999998866 3332110  0011110      0011111234666778899


Q ss_pred             EEEEcccc
Q 035965           82 GVFHVAAS   89 (348)
Q Consensus        82 ~Vih~a~~   89 (348)
                      +||-+.+.
T Consensus        87 vvii~Vpt   94 (446)
T 4a7p_A           87 AVFIAVGT   94 (446)
T ss_dssp             EEEECCCC
T ss_pred             EEEEEcCC
Confidence            99988654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	348
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	3e-33
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-30
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	4e-29
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	3e-25
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	5e-25
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-22
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	8e-21
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	3e-20
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-19
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-19
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	4e-17
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-16
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	8e-16
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	9e-16
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	6e-15
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	3e-13
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	2e-12
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	9e-11
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	2e-10
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-10
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	9e-10
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-09
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-08
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	6e-07
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	7e-07
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	8e-07
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-06
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-06
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	5e-06
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	6e-06
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	8e-06
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	9e-06
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	9e-06
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-05
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-05
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	2e-05
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-05
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-05
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	3e-05
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	4e-05
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	4e-05
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-05
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	8e-05
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	9e-05
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-04
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-04
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-04
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	3e-04
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-04
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-04
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-04
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	4e-04
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	5e-04
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	5e-04
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	6e-04
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.001
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	0.001
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	0.001
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	0.001
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	0.001
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	0.001
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	0.002
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	0.002
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	0.002
d1bg6a2	184	c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvalin	0.002
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.002
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	0.003
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	0.003
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	0.003
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.003
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	0.004

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (309), Expect = 3e-33
 Identities = 54/327 (16%), Positives = 110/327 (33%), Gaps = 29/327 (8%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVR-DPGKLQIFSKWTRSDRLRLFQADLQVE 70
           K   +TG  G++GS L   L+  G+ V        G+ +    W   +   L   D+   
Sbjct: 2   KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV--- 58

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
              +   +  D ++H+A+       + + I+T             TLN+L    +     
Sbjct: 59  --VEPLYIEVDQIYHLASPASPPNYMYNPIKTL------KTNTIGTLNMLGLAKR--VGA 108

Query: 131 RVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFA 190
           R++L S+       +          E     +    N       Y   K ++E   + + 
Sbjct: 109 RLLLASTSEVYGDPEVH-----PQSEDYWGHV----NPIGPRACYDEGKRVAETMCYAYM 159

Query: 191 NENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHI 250
            +  +++         GP +  +    +   +       +  ++  S S      A  ++
Sbjct: 160 KQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQAL-QGEPLTVYGSGSQTR---AFQYV 215

Query: 251 EDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQSSVP-SV 309
            D+ N  + LM ++ +    +   +   I EF   +K    S     F  E Q       
Sbjct: 216 SDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRK 275

Query: 310 ISSEKLK-DLGFNYKHGIEDIICQTIA 335
              +K K  LG+     +E+ + + I 
Sbjct: 276 PDIKKAKLMLGWEPVVPLEEGLNKAIH 302

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  116 bits (292), Expect = 2e-30
 Identities = 57/346 (16%), Positives = 102/346 (29%), Gaps = 44/346 (12%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRD---PGKLQIFSKWTRSDRLRLFQADLQVEGS 72
           +TG  G+IGS +V+ +++        +      G L+  S  + S+R     AD+     
Sbjct: 5   ITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAE 64

Query: 73  FDKAV--MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----- 125
             +       D V H+AA    D ++                I  T  LL+   K     
Sbjct: 65  ITRIFEQYQPDAVMHLAAESHVDRSITGPAAFI------ETNIVGTYALLEVARKYWSAL 118

Query: 126 ---SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLS 182
               ++  R    S+                V+ S   P+       A    Y  SK  S
Sbjct: 119 GEDKKNNFRFHHISTDEVY----GDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASS 174

Query: 183 EETAFKFANENKIDLVSVITTTVAGP--FLTSSVPSSIQVLLSPITGDSKFFSILSSVSN 240
           +     +     +  +    +   GP  F    +P  I   L       K   I      
Sbjct: 175 DHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALE-----GKPLPIYGKGDQ 229

Query: 241 RMGSIALVHIEDICNAHIFLMENDRAQGQY---------ICCVKSCPISEFIDHLKLEYP 291
                  +++ED   A   ++   +A   Y            V         + +     
Sbjct: 230 IR---DWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATS 286

Query: 292 SSKMQTFEGENQSSVP-SVISSEKLK-DLGFNYKHGIEDIICQTIA 335
             +  T+  +         I + K+  +LG+      E  I +T+ 
Sbjct: 287 YREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVE 332

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score =  112 bits (280), Expect = 4e-29
 Identities = 77/343 (22%), Positives = 123/343 (35%), Gaps = 29/343 (8%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTR----SDRLRLFQA 65
                 VTGANG++ S +V+ LLE GY V  T R   KL    K                
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69

Query: 66  DLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           D+  +G++D+ + G  GV H+A+ + F     + +            I  TLN L+A   
Sbjct: 70  DMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPA---------IGGTLNALRAAAA 120

Query: 126 SESVKRVVLTSSVSTITAKDSSGE------WRPVVDESCQTPIHHVWNKKASGWVYVLSK 179
           + SVKR VLTSS  +      + E          ++   +       + + S WVY  SK
Sbjct: 121 TPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASK 180

Query: 180 LLSEETAFKFANENKIDLVSVI--TTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS 237
             +E  A+KF +ENK              G        S           + +    L+ 
Sbjct: 181 TEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALAL 240

Query: 238 VSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCV-KSCPISEFIDHLKLEYPSSKMQ 296
           +  +      V   DI   H+  +   + + + +     +   +  +   +  YPS    
Sbjct: 241 MPPQYY----VSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFP 296

Query: 297 TFEGENQSSVPSV---ISSEKLKDLGFNYKHGIEDIICQTIAS 336
               +    +       S E LK LG      IE+ I   + S
Sbjct: 297 ADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS 339

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  101 bits (253), Expect = 3e-25
 Identities = 67/334 (20%), Positives = 107/334 (32%), Gaps = 43/334 (12%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHA----TVRD----PGKLQIFSKWTRSDRLRLFQADL 67
           VTG  G+IGS  V+ LL   Y         V D     G     +      RLR    D+
Sbjct: 5   VTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDI 64

Query: 68  QVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE 127
           +  G   + + G D + H AA    D ++                +Q T  LL+  + + 
Sbjct: 65  RDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFT------ETNVQGTQTLLQCAVDA- 117

Query: 128 SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAF 187
            V RVV  S+         S +     + S   P             Y  SK  S+  A 
Sbjct: 118 GVGRVVHVSTNQVY----GSIDSGSWTESSPLEPN----------SPYAASKAGSDLVAR 163

Query: 188 KFANENKIDLVSVITTTVAGP--FLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI 245
            +     +D+         GP       +P  +  LL     D     +    +N     
Sbjct: 164 AYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLL-----DGGTLPLYGDGANVR--- 215

Query: 246 ALVHIEDICNAHIFLMENDRAQGQY-ICCVKSCPISEFIDHL--KLEYPSSKMQTFEGEN 302
             VH +D C     ++   RA   Y I         E    L   L    S ++      
Sbjct: 216 EWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRK 275

Query: 303 QSSVPSVISSEKL-KDLGFNYKHGIEDIICQTIA 335
              +   +   K+ ++LG+  +    D + +T+ 
Sbjct: 276 GHDLRYSLDGGKIERELGYRPQVSFADGLARTVR 309

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  101 bits (253), Expect = 5e-25
 Identities = 55/371 (14%), Positives = 115/371 (30%), Gaps = 68/371 (18%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYIVHATVR-----DPGKLQ--IFSKWTRSDRLRLF 63
           SK   +TG  G  GS+L + LLE+GY VH   R     +  ++        T + +  L 
Sbjct: 1   SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 60

Query: 64  QADLQVEGSFDKAVMGC--DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLK 121
             DL    +  + +     D V+++ A     ++ +    T       +     TL LL+
Sbjct: 61  YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTA------DVDAMGTLRLLE 114

Query: 122 ACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSK 179
           A      E   R    S+           +  P  + +   P             Y ++K
Sbjct: 115 AIRFLGLEKKTRFYQASTSELY----GLVQEIPQKETTPFYPR----------SPYAVAK 160

Query: 180 LLSEETAFKFANENKIDLVSVITTTVAGPFL-TSSVPSSIQVLLSPITGDSKFFSILSSV 238
           L +      +     +   + I      P    + V   I   ++ I    +    L ++
Sbjct: 161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNM 220

Query: 239 SNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFID----HLKLEYPSSK 294
            +        H +D       +++ ++ +   I       + +F++     L ++     
Sbjct: 221 DSLRDWG---HAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEG 277

Query: 295 MQTFEGENQSSVP----------------------------SVISSEKLK-DLGFNYKHG 325
               E     SV                              +    K    LG+  +  
Sbjct: 278 TGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEIT 337

Query: 326 IEDIICQTIAS 336
           + +++ + +A+
Sbjct: 338 LREMVSEMVAN 348

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 94.3 bits (233), Expect = 2e-22
 Identities = 50/335 (14%), Positives = 100/335 (29%), Gaps = 32/335 (9%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP--GKLQIFSKWTRSDRLRLFQADLQV 69
           ++  VTG  G  G++L K LLE+GY VH  V            +      ++    D+  
Sbjct: 1   RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 70  EGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESV 129
             S  +AV+                            T          +LL+A  +    
Sbjct: 61  ACSVQRAVIKAQPQEV----YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPE 116

Query: 130 KRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKF 189
            R    S     T++          DE+  TP +           Y ++KL        +
Sbjct: 117 TRFYQAS-----TSEMFGLIQAERQDEN--TPFYPR-------SPYGVAKLYGHWITVNY 162

Query: 190 ANENKIDLVSVITTTVAGPFLTSSVPSS--IQVLLSPITGDSKFFSILSSVSNRMGSIAL 247
                +   S I      P       +      +     G  +   + +  + R      
Sbjct: 163 RESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKR----DW 218

Query: 248 VHIEDICNAHIFLMENDRAQGQYICCVKSCPI----SEFIDHLKLEYPSSKMQTFEGENQ 303
               D   A   +++ D+A    +    +  +        +H+ L+Y             
Sbjct: 219 GFAGDYVEAMWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRP 278

Query: 304 SSVP-SVISSEKLK-DLGFNYKHGIEDIICQTIAS 336
           + V   + +  K +  LG+  +  ++++I   + +
Sbjct: 279 AEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEA 313

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 89.2 bits (220), Expect = 8e-21
 Identities = 41/338 (12%), Positives = 94/338 (27%), Gaps = 45/338 (13%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           +   + G  G +GS + + L +RG +    +R   +L +            F ++     
Sbjct: 3   QRVFIAGHRGMVGSAIRRQLEQRGDVELV-LRTRDELNLLDS---RAVHDFFASE----- 53

Query: 72  SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR 131
                    D V+  AA +   +        ++   ++        N++ A  +++ V +
Sbjct: 54  -------RIDQVYLAAAKVGGIVANNTYPADFIYQNMM-----IESNIIHAAHQND-VNK 100

Query: 132 VVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFAN 191
           ++   S             +  + ES           + +   Y ++K+   +    +  
Sbjct: 101 LLFLGSSCIY-----PKLAKQPMAESE----LLQGTLEPTNEPYAIAKIAGIKLCESYNR 151

Query: 192 ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSN-------RMGS 244
           +   D  SV+ T + GP       +S  +                 V         R   
Sbjct: 152 QYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFL 211

Query: 245 IALVHIEDI------CNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTF 298
                           +               +     C I E    +           F
Sbjct: 212 HVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVF 271

Query: 299 EGENQSSVP-SVISSEKLKDLGFNYKHGIEDIICQTIA 335
           +       P  ++   +L  LG+ ++  +E  +  T  
Sbjct: 272 DASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQ 309

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 88.5 bits (218), Expect = 3e-20
 Identities = 50/337 (14%), Positives = 102/337 (30%), Gaps = 21/337 (6%)

Query: 1   MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRL 60
           +E+ +     +    +TGA G+I S + + L   G+ V A+       +           
Sbjct: 5   LEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDW----KKNEHMTEDMFCD 60

Query: 61  RLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLL 120
                DL+V  +  K   G D VF+                    S ++      + N++
Sbjct: 61  EFHLVDLRVMENCLKVTEGVDHVFN-----LAADMGGMGFIQSNHSVIMYNNTMISFNMI 115

Query: 121 KACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKL 180
           +A   +  +KR    SS                + ES   P             + L KL
Sbjct: 116 EAARIN-GIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ-------DAFGLEKL 167

Query: 181 LSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSN 240
            +EE    +  +  I+        + GPF T                 +           
Sbjct: 168 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG 227

Query: 241 RMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEG 300
              + +   I++     + L ++D  +   I   +   ++E  + +   +   K+     
Sbjct: 228 LQ-TRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVL-SFEEKKLPIHHI 285

Query: 301 ENQSSVP-SVISSEKLK-DLGFNYKHGIEDIICQTIA 335
                V      +  +K  LG+     +++ +  T  
Sbjct: 286 PGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYF 322

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (212), Expect = 1e-19
 Identities = 54/358 (15%), Positives = 112/358 (31%), Gaps = 53/358 (14%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVR-----DPGKLQIFSKWTRS---DRLRLF 63
               +TG  G  GS+L + LLE+GY VH  VR     + G+++   K  ++     ++L 
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 64  QADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC 123
             DL       K +           ++    +VK + +    +  ++     TL LL A 
Sbjct: 62  YGDLTDSTCLVKIINEVKPTEIY--NLGAQSHVKISFDLAEYTADVD--GVGTLRLLDAV 117

Query: 124 LKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLL 181
                 +  +    S+           +  P  + +   P             Y  +KL 
Sbjct: 118 KTCGLINSVKFYQASTSELY----GKVQEIPQKETTPFYPR----------SPYGAAKLY 163

Query: 182 SEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNR 241
           +      F     +  V+ I      P   ++  +        +           S+ N 
Sbjct: 164 AYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKIS--RSVAKIYLGQLECFSLGNL 221

Query: 242 MGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGE 301
                  H +D   A   +++ND  +   I   +   + EF++   L    + +   + E
Sbjct: 222 DAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNE 281

Query: 302 NQSSVPS----------------------VISSEKLK-DLGFNYKHGIEDIICQTIAS 336
           N+                                K K  L +  +   ++++ + + +
Sbjct: 282 NEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHA 339

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 84.7 bits (208), Expect = 4e-19
 Identities = 53/333 (15%), Positives = 90/333 (27%), Gaps = 26/333 (7%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRD----PGKLQIFSKWTRSDRLRLFQADL 67
           K   VTG  G+IGS  V  +      VH TV D     G           DR+ L   D+
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDI 61

Query: 68  QVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE 127
                 DK     D + H AA    D ++ D       + +    +              
Sbjct: 62  ADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHV 121

Query: 128 SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAF 187
           S   V     +         G       E+   P             Y  +K  S+    
Sbjct: 122 STDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS----------SPYSSTKAASDLIVK 171

Query: 188 KFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIAL 247
            +     +       +   GP+    +   I   ++ I    K        + R      
Sbjct: 172 AWVRSFGVKATISNCSNNYGPY--QHIEKFIPRQITNILAGIKPKLYGEGKNVRD----W 225

Query: 248 VHIEDICNAHIFLMENDRAQGQYICCV--KSCPISEFIDHLKLEYPSSKMQTFEGENQSS 305
           +H  D       ++   R    Y+     +          L+             +    
Sbjct: 226 IHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGH 285

Query: 306 VP-SVISSEKLK-DLGFNYKH-GIEDIICQTIA 335
                I + KL+ +LG+  +     + + +TI 
Sbjct: 286 DLRYAIDASKLRDELGWTPQFTDFSEGLEETIQ 318

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 79.0 bits (193), Expect = 4e-17
 Identities = 51/337 (15%), Positives = 109/337 (32%), Gaps = 27/337 (8%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVR--DPGKLQIFSKWTRSDRLRLFQADLQVEGSF 73
           +TG  G++GS L    L +G  +         G        +          D++ +   
Sbjct: 5   ITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDV 64

Query: 74  DKAVMGC--DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR 131
            + +     D  FH+A  +    ++ +    +         +  TLNLL+A  +  S   
Sbjct: 65  TRLITKYMPDSCFHLAGQVAMTTSIDNPCMDF------EINVGGTLNLLEAVRQYNSNCN 118

Query: 132 VVLTS--SVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKF 189
           ++ +S   V     +    E         +   +    +      Y  SK  +++    +
Sbjct: 119 IIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDY 178

Query: 190 ANENKIDLVSVITTTVAG-----PFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS 244
           A    ++ V    +++ G      +    V    Q  +    G +K F+I  +       
Sbjct: 179 ARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD- 237

Query: 245 IALVHIEDICNAHIFLMEND-----RAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFE 299
             ++H ED+ + +   + N       A       V S  + E    L+         T  
Sbjct: 238 --VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNL 295

Query: 300 GENQSSVP-SVISSEKLK-DLGFNYKHGIEDIICQTI 334
              +S     V   +K+   + ++ K   +D + +  
Sbjct: 296 PVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMY 332

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 76.9 bits (188), Expect = 2e-16
 Identities = 55/349 (15%), Positives = 111/349 (31%), Gaps = 55/349 (15%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVR-DPGKLQIFSKWTR--SDRLRLFQADLQVEGS 72
           VTG +GYIGS     LL+ G+ V         K  +     R         + D++ E  
Sbjct: 5   VTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEAL 64

Query: 73  FDKAV--MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
             + +     D V H A       +V+  +E Y      +  +  TL L+ A  ++ +VK
Sbjct: 65  MTEILHDHAIDTVIHFAGLKAVGESVQKPLEYY------DNNVNGTLRLISAM-RAANVK 117

Query: 131 RVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFA 190
             + +SS +             V  +  + P    +        Y  SKL+ E+      
Sbjct: 118 NFIFSSSAT-------------VYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQ 164

Query: 191 NENKIDLVSVI-TTTVAGP------------FLTSSVPSSIQVLLS-----PITGDSKFF 232
                  ++++      G                + +P   QV +       I G+    
Sbjct: 165 KAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT 224

Query: 233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQY----ICCVKSCPISEFIDHLKL 288
              + V +       +H+ D+ + H+  ME    +       +       + + ++    
Sbjct: 225 EDGTGVRD------YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSK 278

Query: 289 EYPSSKMQTFEGENQSSVP-SVISSEKLK-DLGFNYKHGIEDIICQTIA 335
                    F    +  +P     + K   +L +     ++++   T  
Sbjct: 279 ACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWH 327

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 75.1 bits (183), Expect = 8e-16
 Identities = 52/342 (15%), Positives = 104/342 (30%), Gaps = 25/342 (7%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYIVHATVR-DPGKLQIFSKWTR--SDRLRLFQADL 67
           SK   VTG  GYIGS  V  L+E GY                ++        +  ++ DL
Sbjct: 1   SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDL 60

Query: 68  QVEGSFDKAVM--GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
                 +K       D V H A       + +  +  Y  + +           L   ++
Sbjct: 61  CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVV-------LLELMQ 113

Query: 126 SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEET 185
             +V + V +SS +            P+ +E    P +   + K +    +     S++ 
Sbjct: 114 QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKK 173

Query: 186 AFKFANENKIDLVSVITTTVAGP----FLTSSVPSSIQVLLS-----PITGDSKFFSILS 236
           ++KFA     + +    + + G        + +P   QV +       I GD       +
Sbjct: 174 SWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGT 233

Query: 237 SVSNRMGSIALVHIEDICNAHIFLMENDRAQGQY--ICCVKSCPISEFIDHLKLEYPSSK 294
            + + +  + L         ++     +    +   +   K   + E             
Sbjct: 234 PIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL 293

Query: 295 MQTFEGENQSSVP-SVISSEKLK-DLGFNYKHGIEDIICQTI 334
                G     V       ++ K +L +  +  +ED      
Sbjct: 294 PYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLW 335

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 75.1 bits (183), Expect = 9e-16
 Identities = 55/340 (16%), Positives = 101/340 (29%), Gaps = 37/340 (10%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP--------GKLQIFSKWTRSDRLRLF 63
           K   +TG  G  GS+L + LL +GY VH  +R            + I         ++L 
Sbjct: 2   KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 64  QADLQVEGSFDKAV--MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLK 121
            ADL    S  + +  +  D V+++AA     ++ +    T          +   +    
Sbjct: 62  YADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT 121

Query: 122 ACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLL 181
                        +S +             P   E+  TP H           Y  SK  
Sbjct: 122 IDSGRTVKYYQAGSSEMFGS--------TPPPQSET--TPFHPR-------SPYAASKCA 164

Query: 182 SEETAFKFANENKIDLVSVITTTVAGPFL-TSSVPSSIQVLLSPITGDSKFFSILSSVSN 240
           +      +     +   + I      P    + V   I   L  I            + N
Sbjct: 165 AHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIK---VGLQTKLFLGN 221

Query: 241 RMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEG 300
              S       D   A   +++ ++     +   +   + EF+D        +     E 
Sbjct: 222 LQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEI 281

Query: 301 ENQSSVP-----SVISSEKLK-DLGFNYKHGIEDIICQTI 334
           + +   P         + K K  LG+  + G E ++   +
Sbjct: 282 DQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMV 321

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 72.8 bits (177), Expect = 6e-15
 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 1/85 (1%)

Query: 12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
          KT  V GA G  G+ L++     G+ V A V     L    +      + LFQ  L    
Sbjct: 4  KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA-EELQAIPNVTLFQGPLLNNV 62

Query: 72 SFDKAVMGCDGVFHVAASMEFDINV 96
               +     +  +  + +    +
Sbjct: 63 PLMDTLFEGAHLAFINTTSQAGDEI 87

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 67.3 bits (163), Expect = 3e-13
 Identities = 53/349 (15%), Positives = 111/349 (31%), Gaps = 52/349 (14%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHA-------TVRDPGKLQIFSKWTRSDRLRL 62
           + K + +TG  G+IGS L++TLL+    V           R+  +++      +    + 
Sbjct: 15  QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKF 74

Query: 63  FQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA 122
            Q D++     + A  G D V H         +V  +I   + S   N  I   LN+L A
Sbjct: 75  IQGDIRNLDDCNNACAGVDYVLH----QAALGSVPRSINDPITSNATN--IDGFLNMLIA 128

Query: 123 CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLS 182
              ++        SS +            P V+++   P+            Y ++K ++
Sbjct: 129 ARDAKVQSFTYAASSST-----YGDHPGLPKVEDTIGKPL----------SPYAVTKYVN 173

Query: 183 EETAFKFANENKIDLVSVITTTVAGPF------LTSSVPSSIQVLLSPITGDSKFFSILS 236
           E  A  F+       + +    V G          + +P     ++           I  
Sbjct: 174 ELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMI-----QGDDVYING 228

Query: 237 SVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCV---KSCPISEFIDHLKLEYPSS 293
                       +IE+   A++            +  +       +++    L+     +
Sbjct: 229 DGETSR---DFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAEN 285

Query: 294 KMQ-----TFEGENQSSVP-SVISSEKLK-DLGFNYKHGIEDIICQTIA 335
            +       +    +  V  S+    K    LG+  K+ +   +   + 
Sbjct: 286 GVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMP 334

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (153), Expect = 2e-12
 Identities = 19/79 (24%), Positives = 28/79 (35%), Gaps = 4/79 (5%)

Query: 12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
          K   + GA G  G   +   ++ GY V   VRD  +L             +   D+    
Sbjct: 4  KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR----PAHVVVGDVLQAA 59

Query: 72 SFDKAVMGCDGVFHVAASM 90
            DK V G D V  +  + 
Sbjct: 60 DVDKTVAGQDAVIVLLGTR 78

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 59.1 bits (141), Expect = 9e-11
 Identities = 26/262 (9%), Positives = 58/262 (22%), Gaps = 42/262 (16%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQV 69
            T  VTGA+G  G  + K L E    ++    VR     +            +F  D+  
Sbjct: 4   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----GGEADVFIGDITD 58

Query: 70  EGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESV 129
             S + A  G D +  + +++       D  +      +                     
Sbjct: 59  ADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDA 118

Query: 130 KRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKF 189
            +V     +  + +   +    P+        +      +                    
Sbjct: 119 AKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADS-------------- 164

Query: 190 ANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVH 249
                     +    +                     G  +   +             V 
Sbjct: 165 ----GTPYTIIRAGGLLDKE-----------------GGVRELLVGKDDELLQTDTKTVP 203

Query: 250 IEDICNAHIFLMENDRAQGQYI 271
             D+    I  +  + A+ +  
Sbjct: 204 RADVAEVCIQALLFEEAKNKAF 225

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 58.6 bits (140), Expect = 2e-10
 Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 21/156 (13%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQI----FSKWTRSDRLRLFQADLQVEG 71
           + G  GYIG  +V   +  G+  +   R      I       + +    +L +A L    
Sbjct: 8   IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQ 67

Query: 72  SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR 131
               A+   D V    A      ++ + +                  L++A  ++ ++KR
Sbjct: 68  RLVDALKQVDVVISALAGGVLSHHILEQL-----------------KLVEAIKEAGNIKR 110

Query: 132 VVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN 167
            + +         + + +   +     +     +  
Sbjct: 111 FLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEA 146

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (139), Expect = 4e-10
 Identities = 44/354 (12%), Positives = 94/354 (26%), Gaps = 51/354 (14%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYIVHA----------TVRDPGKLQIFSKWTRSDRL 60
           ++   VTG  GYIGS  V  LLE GY+                 P  L+   + T    +
Sbjct: 2   AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSV 60

Query: 61  RLFQADLQVEGSFDKAVMGCDG--VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLN 118
              + D+  +G+  +         V H A       +V+  ++ Y  +      +   + 
Sbjct: 61  EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 120

Query: 119 LLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLS 178
                    S                        V       P+            Y  S
Sbjct: 121 AHGVKNLVFS--------------------SSATVYGNPQYLPLDEAHPTGGCTNPYGKS 160

Query: 179 KLLSEETAFKFANEN-KIDLVSVITTTVAGPFLTSSVPSS--------IQVLLSPITGDS 229
           K   EE        +   + V +      G   +  +           +  +     G  
Sbjct: 161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRR 220

Query: 230 KFFSILSSVSNRMGSIA---LVHIEDICNAHIFLMENDRAQGQY----ICCVKSCPISEF 282
           +  ++  +  +          +H+ D+   HI  +   + Q       +       + + 
Sbjct: 221 EALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQM 280

Query: 283 IDHLKLEYPSSKMQTFEGENQSSVP-SVISSEKLK-DLGFNYKHGIEDIICQTI 334
           +  ++               +  V     +    + +LG+    G++ +     
Sbjct: 281 VQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLW 334

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 56.7 bits (135), Expect = 9e-10
 Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 5/89 (5%)

Query: 9  GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLR-----LF 63
          G      + GA GYIG  + K  L+ G+     VR+        K    +  +     + 
Sbjct: 1  GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 60

Query: 64 QADLQVEGSFDKAVMGCDGVFHVAASMEF 92
             +    S  +AV   D V     S++ 
Sbjct: 61 HGSIDDHASLVEAVKNVDVVISTVGSLQI 89

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 56.8 bits (135), Expect = 1e-09
 Identities = 41/332 (12%), Positives = 92/332 (27%), Gaps = 16/332 (4%)

Query: 10  RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRD-PGKLQIFSKWTRSDRLRLFQADLQ 68
           + K   VTG  G+ G WL   L   G  V       P    +F     +D ++    D++
Sbjct: 7   QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIR 66

Query: 69  VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
            +    +++           + +  + +  +      ST +   +          L++  
Sbjct: 67  DQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVY--------LLEAIR 118

Query: 129 VKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFK 188
               V      T      + EW     E+     +  ++        V S   +      
Sbjct: 119 HVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPA 178

Query: 189 FANENKIDLVSVITTTVAGP--FLTSSVPSSI---QVLLSPITGDSKFFSILSSVSNRMG 243
              ++   + +V    V G   +    +   I        P+   +              
Sbjct: 179 NYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPL 238

Query: 244 SIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQ 303
           S  L+  + +        E                I E +     E  S ++      ++
Sbjct: 239 SGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHE 298

Query: 304 SSVPSVISSEKLK-DLGFNYKHGIEDIICQTI 334
           +     +   K K  LG++ +  +   +   +
Sbjct: 299 AHY-LKLDCSKAKMQLGWHPRWNLNTTLEYIV 329

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 51.7 bits (122), Expect = 5e-08
 Identities = 52/367 (14%), Positives = 110/367 (29%), Gaps = 50/367 (13%)

Query: 16  VTGANGYIGSWLVKTLL-ERGYIVHA----------TVRDPGKLQIFSKWTRSDRLRLFQ 64
           V G  GYIGS  V+ LL +  + V            +     +  +  K  +SD  +   
Sbjct: 7   VCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPW 66

Query: 65  ADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL 124
           AD       +   +  +   +   +    I+   ++  ++             +     +
Sbjct: 67  ADRYAA--LEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGI 124

Query: 125 KSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEE 184
                  ++        ++  +      +   S       +  KK+    Y  SKL++E 
Sbjct: 125 LRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAER 184

Query: 185 TAFKFANENKIDLVSVITTTVAG-----------PFLTSSVPSSIQVLLSPITGDSKFFS 233
                A    I  + +      G              T  +P  +  ++S I  D +   
Sbjct: 185 MIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTI 244

Query: 234 ILSSVSNRMGSIA--------------LVHIEDICNAHIFLMENDRAQGQYICCV----- 274
              + +++   I                VH+ D+ +AHI  ++     G           
Sbjct: 245 HEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVF 304

Query: 275 -----KSCPISEFIDHLKLEYPSSKMQTFEGENQSSVP-SVISSEKLK-DLGFNYKHGIE 327
                +   + E I+  +            G  +      V +S+K +  LG+  K+   
Sbjct: 305 NLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTL 364

Query: 328 DIICQTI 334
           + I +T 
Sbjct: 365 EAIMETS 371

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 47.7 bits (113), Expect = 6e-07
 Identities = 40/258 (15%), Positives = 84/258 (32%), Gaps = 44/258 (17%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           K   VTG    +G  +VK LL  G  V  +  +    Q  +     +R    + D+  E 
Sbjct: 7   KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-GERSMFVRHDVSSEA 65

Query: 72  SFDKAVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL 124
            +   +          + + + A  +         +E + +  ++    +S     +  +
Sbjct: 66  DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSR--LLKINTESVFIGCQQGI 123

Query: 125 KS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLS 182
            +  E+   ++  +SVS+                  +    +  +K     V  L++  +
Sbjct: 124 AAMKETGGSIINMASVSSWLP--------------IEQYAGYSASK---AAVSALTRAAA 166

Query: 183 EETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRM 242
                +      I + S+    +  P + +S+P           G SK   +     NR 
Sbjct: 167 LSCRKQGYA---IRVNSIHPDGIYTPMMQASLPK----------GVSKEMVLHDPKLNRA 213

Query: 243 GSIALVHIEDICNAHIFL 260
           G   +   E I    +FL
Sbjct: 214 GRAYMP--ERIAQLVLFL 229

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 47.7 bits (113), Expect = 7e-07
 Identities = 39/278 (14%), Positives = 81/278 (29%), Gaps = 46/278 (16%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ-----IFSKWTRSDRLRLFQAD 66
           KT  +TG++  IG        + G  V  T R   +L+     I        ++    AD
Sbjct: 6   KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD 65

Query: 67  L----QVEGSFDKAVM---GCDGVFHVAASMEFDINVKDNIETYVQS--TVINPAIQSTL 117
           +      +   +  +      D + + A +   D       +  +      +   +Q+ +
Sbjct: 66  VTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 125

Query: 118 NLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPI-HHVWNKKASGWVYV 176
            + K                                   +        ++   A   +  
Sbjct: 126 EMTKKVKPHLV---------------ASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQ 170

Query: 177 LSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS 236
            ++  + + A     +  I + SV    V   F           +  P     KF++ ++
Sbjct: 171 YTRSTAIDLA-----KFGIRVNSVSPGMVETGFT--------NAMGMPDQASQKFYNFMA 217

Query: 237 SVSNRMGSIALVHIEDICNAHIFLMENDRAQ---GQYI 271
           S    +   A    E I N  +FL + + +    GQ I
Sbjct: 218 SHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSI 255

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 48.0 bits (112), Expect = 8e-07
 Identities = 45/362 (12%), Positives = 86/362 (23%), Gaps = 41/362 (11%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVH-------------------ATVRDPGKLQIFS 52
               V G +GY G      L ++ Y V                      +          
Sbjct: 2   SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 61

Query: 53  KWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPA 112
           K      + L+  D+       +          V    E        I+        +  
Sbjct: 62  KALTGKSIELYVGDICDFEFLAE-SFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNN 120

Query: 113 IQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASG 172
           +  TLN+L A  +      +V   ++      +   E   +            + K+AS 
Sbjct: 121 VIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASS 180

Query: 173 WVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF 232
           + Y LSK+              I    +    V G     +                   
Sbjct: 181 F-YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 239

Query: 233 SILSSVSNRMGSIALVHI-----------EDICNAHIFLMENDRAQGQYICCVKSC---- 277
                V   +G    V+             D        + N    G++    +      
Sbjct: 240 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFS 299

Query: 278 --PISEFIDHL--KLEYPSSKMQTFEGENQSSVP-SVISSEKLKDLGFNYKHGIEDIICQ 332
              ++  +     KL     KM       ++          KL +LG    +  + ++  
Sbjct: 300 VNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDS 359

Query: 333 TI 334
            +
Sbjct: 360 LL 361

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 46.4 bits (109), Expect = 1e-06
 Identities = 45/245 (18%), Positives = 83/245 (33%), Gaps = 29/245 (11%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVH--ATVRDPGKLQIFSKWTRSDRLRLFQADLQV 69
            +  VTGAN  IG  LV+ L++   I H  AT RD  K        +  R+ +    +  
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-IKDSRVHVLPLTVTC 62

Query: 70  EGSFDKAVM---------GCDGVFHVAASM-EFDINVKDNIETYVQSTVIN--PAIQSTL 117
           + S D  V          G   + + A  +  +  N + N     +   +N    +  T 
Sbjct: 63  DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQ 122

Query: 118 NLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVL 177
            LL     + S +     S         SSG      + S       +  + +   + + 
Sbjct: 123 KLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMF 182

Query: 178 SKLLSEETAFKFANENKIDLVSV----ITTTVAGPFLTSSVPSSIQVLLSPITGDS---- 229
            + L+ +       ++ + +V+     + T + G     +V  S   L+S          
Sbjct: 183 GRTLAVDLK-----DDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHN 237

Query: 230 -KFFS 233
            +FF 
Sbjct: 238 GRFFM 242

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 26/151 (17%), Positives = 53/151 (35%), Gaps = 14/151 (9%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRS----DRLRLFQADL 67
           +   VTGA+G IG+ + + L+++G  V    R  G ++  +   +S      L  ++ DL
Sbjct: 11  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL 70

Query: 68  ----QVEGSFDKAV---MGCDGVFHVAASMEFDINVKDNIETYVQSTVIN--PAIQSTLN 118
                +   F        G D   + A     D  +  +   +     +N       T  
Sbjct: 71  SNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTRE 130

Query: 119 LLKACLKSESVK-RVVLTSSVSTITAKDSSG 148
             ++  +       ++  +S+S       S 
Sbjct: 131 AYQSMKERNVDDGHIININSMSGHRVLPLSV 161

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 44.8 bits (104), Expect = 5e-06
 Identities = 8/44 (18%), Positives = 13/44 (29%)

Query: 11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKW 54
           K   + GA G  G  L+  +L    +          L    + 
Sbjct: 2  PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRL 45

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 44.9 bits (104), Expect = 6e-06
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 4/64 (6%)

Query: 16 VTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFD 74
          + G NG+IG+ L + LL    Y V+        +   S++         + D+ +   + 
Sbjct: 5  ILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI---SRFLNHPHFHFVEGDISIHSEWI 61

Query: 75 KAVM 78
          +  +
Sbjct: 62 EYHV 65

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (102), Expect = 8e-06
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 11 SKTFCVTGANGYIGSWLVKTLLERGYI--VHATVRDPGKLQIFSKW 54
          +K+  + GA+G  G  L+K +LE+G    V    R        +  
Sbjct: 14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYK 59

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 44.3 bits (104), Expect = 9e-06
 Identities = 20/128 (15%), Positives = 32/128 (25%), Gaps = 10/128 (7%)

Query: 8   TGR--SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRS-DRLRLFQ 64
           T R   K   +TG  G IG    K  +  G  V          Q       S D +    
Sbjct: 1   TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVH 60

Query: 65  ADLQVEGSFDKAVMGC-------DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTL 117
            D+  +      V          D +F     +                 V++  +    
Sbjct: 61  CDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF 120

Query: 118 NLLKACLK 125
            + K   +
Sbjct: 121 LVAKHAAR 128

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 9e-06
 Identities = 15/144 (10%), Positives = 40/144 (27%), Gaps = 14/144 (9%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRS--DRLRLFQADLQV 69
           +   +TGA   IG        +    +     +   L+  +   +    ++  F  D   
Sbjct: 8   EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN 67

Query: 70  EGSFDKAVM-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA 122
                 +             + + A  +              ++  +N  + +     KA
Sbjct: 68  REDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVN--VLAHFWTTKA 125

Query: 123 CLKSESVK---RVVLTSSVSTITA 143
            L + +      +V  +S +   +
Sbjct: 126 FLPAMTKNNHGHIVTVASAAGHVS 149

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.8 bits (103), Expect = 1e-05
 Identities = 41/269 (15%), Positives = 92/269 (34%), Gaps = 41/269 (15%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-----QIFSKWTRSDRLRLFQAD 66
           K   +TG++  IG          G  V  T R   +L     QI +       +    AD
Sbjct: 6   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVAD 65

Query: 67  LQVEGSFDKAV-------MGCDGVFHVAASMEFDINVKDNIETYVQS--TVINPAIQSTL 117
           +  +   D+ +          D + + A +   D   K      ++S    +N  ++S +
Sbjct: 66  VTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 125

Query: 118 NLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVL 177
            L K  +   S  +  + +  S  +   ++ ++            ++   K A   +   
Sbjct: 126 ALTKKAVPHLSSTKGEIVNISSIASGLHATPDF-----------PYYSIAKAA---IDQY 171

Query: 178 SKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS 237
           ++  + +       ++ I + S+    VA  F           +  P     KF+S +++
Sbjct: 172 TRNTAIDLI-----QHGIRVNSISPGLVATGFG--------SAMGMPEETSKKFYSTMAT 218

Query: 238 VSNRMGSIALVHIEDICNAHIFLMENDRA 266
           +   + +  +   +DI     FL +   +
Sbjct: 219 MKECVPAGVMGQPQDIAEVIAFLADRKTS 247

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           +   VTGA   IG   V+ L   G  V A  R    L    +      +     DL    
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR--ECPGIEPVCVDLGDWE 65

Query: 72  SFDKAV---MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           + ++A+      D + + AA       ++   E + +       +++ + + +   +
Sbjct: 66  ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDR--SFEVNLRAVIQVSQIVAR 120

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 43.7 bits (101), Expect = 2e-05
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 16 VTGANGYIGSWLVKTLLERGYIVHATVRDPGKL 48
          +TGANG +G  + K L  +   V  T      +
Sbjct: 6  ITGANGQLGREIQKQLKGKNVEVIPTDVQDLDI 38

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 37/270 (13%), Positives = 79/270 (29%), Gaps = 49/270 (18%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           +   +TG    +G  LV   +  G  V    +   +L         D +     D++   
Sbjct: 6   EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELET-DHGDNVLGIVGDVRSLE 64

Query: 72  SFDKAV-------------MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLN 118
              +A              +   G++  + ++        +        V +  ++  ++
Sbjct: 65  DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFD---EVFHINVKGYIH 121

Query: 119 LLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYV 176
            +KACL +   S   V+ T S +            P+   +                +  
Sbjct: 122 AVKACLPALVASRGNVIFTISNAGFYP----NGGGPLYTAAK-------------HAIVG 164

Query: 177 LSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS 236
           L + L+ E A        + +  V +  +       S        +S +       S+L 
Sbjct: 165 LVRELAFELAP------YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLP 218

Query: 237 SVSNRMGSIALVHIEDICNAHIFLMENDRA 266
               RM       +E+   A++F      A
Sbjct: 219 --IGRMPE-----VEEYTGAYVFFATRGDA 241

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 18/121 (14%), Positives = 41/121 (33%), Gaps = 10/121 (8%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           KT  +TG    +G+   +  +  G  V        +    ++    D  R    D+ +E 
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR-ELGDAARYQHLDVTIEE 64

Query: 72  SFDKAV-------MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL 124
            + + V          DG+ + A          +++E + +  V+   +      +K  +
Sbjct: 65  DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRK--VVEINLTGVFIGMKTVI 122

Query: 125 K 125
            
Sbjct: 123 P 123

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 42.6 bits (98), Expect = 3e-05
 Identities = 7/30 (23%), Positives = 13/30 (43%)

Query: 16 VTGANGYIGSWLVKTLLERGYIVHATVRDP 45
          + G  G +G  L ++L   G ++   V   
Sbjct: 5  LFGKTGQVGWELQRSLAPVGNLIALDVHSK 34

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 7/117 (5%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
               VTGA   IG   VK L   G  V A  R    L   +K      +     DL    
Sbjct: 6   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK--ECPGIEPVCVDLGDWD 63

Query: 72  SFDKAV---MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK 125
           + +KA+      D + + AA +     ++   E + +S  +N  ++S   + +   +
Sbjct: 64  ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVN--LRSVFQVSQMVAR 118

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 42.3 bits (99), Expect = 4e-05
 Identities = 38/275 (13%), Positives = 90/275 (32%), Gaps = 42/275 (15%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ-----IFSKWTRSDRLRLFQAD 66
           K+  +TG++  IG        + G  V  T R+  +L+     I      ++++    AD
Sbjct: 5   KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD 64

Query: 67  L----QVEGSFDKAVM---GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNL 119
           +      +   +  +      D + + A +   D     +    +         Q+ + +
Sbjct: 65  VTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 124

Query: 120 LKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSK 179
            +   +     +  + +  S +                 Q    + +   A   +   ++
Sbjct: 125 TQKTKEHLIKTKGEIVNVSSIVAGP--------------QAHSGYPYYACAKAALDQYTR 170

Query: 180 LLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVS 239
             + +       ++ + + SV    VA  F+ +        +  P T   K +S + S  
Sbjct: 171 CTAIDLI-----QHGVRVNSVSPGAVATGFMGA--------MGLPETASDKLYSFIGSRK 217

Query: 240 NRMGSIALVHIEDICNAHIFLMENDRAQ---GQYI 271
             +        E+I N  +FL + + +    GQ I
Sbjct: 218 ECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSI 252

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.3 bits (96), Expect = 7e-05
 Identities = 20/143 (13%), Positives = 41/143 (28%), Gaps = 5/143 (3%)

Query: 11  SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSKWTRSDRLRLFQADL 67
           ++   V G  G +GS  V+    R + V +      +     +  K T S   +  Q   
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTA 61

Query: 68  QVEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE 127
           +V           D +  VA           ++              ST++   A    +
Sbjct: 62  EVGKLLGDQ--KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLK 119

Query: 128 SVKRVVLTSSVSTITAKDSSGEW 150
               + L  + + +        +
Sbjct: 120 EGGLLTLAGAKAALDGTPGMIGY 142

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 8e-05
 Identities = 41/253 (16%), Positives = 82/253 (32%), Gaps = 31/253 (12%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           K   +T A   IG          G  V AT  +  KLQ   K+       L     +   
Sbjct: 7   KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQID 66

Query: 72  SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR 131
            F   V   D +F+VA  +     +    + +     +N  ++S   ++KA L     ++
Sbjct: 67  QFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDF--SMNLNVRSMYLMIKAFLPKMLAQK 124

Query: 132 VVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFAN 191
                ++S++ +       R V   +                V  L+K ++ +       
Sbjct: 125 SGNIINMSSVASSVKGVVNRCVYSTTK-------------AAVIGLTKSVAADFI----- 166

Query: 192 ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIE 251
           +  I    V   TV  P L   + +           +++   +    + R  +      E
Sbjct: 167 QQGIRCNCVCPGTVDTPSLQERIQA------RGNPEEARNDFLKRQKTGRFAT-----AE 215

Query: 252 DICNAHIFLMEND 264
           +I    ++L  ++
Sbjct: 216 EIAMLCVYLASDE 228

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 41.6 bits (95), Expect = 9e-05
 Identities = 11/21 (52%), Positives = 15/21 (71%)

Query: 16 VTGANGYIGSWLVKTLLERGY 36
          VTG  G+IGS +VK L ++G 
Sbjct: 4  VTGGAGFIGSNIVKALNDKGI 24

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 34/200 (17%), Positives = 60/200 (30%), Gaps = 24/200 (12%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSD--RLRLFQADLQV 69
            T  VTG +  IG  +V+ L   G  V+   R+  +L    +  R     +     DL  
Sbjct: 7   TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS 66

Query: 70  EGSFDKAV-------MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKA 122
               DK +        G   +    A +      KD  E      +         N   A
Sbjct: 67  RTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGT-------NFEAA 119

Query: 123 CLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLS 182
              S+    ++  S    +    S   +  +                + G +  ++K L+
Sbjct: 120 YHLSQIAYPLLKASQNGNVIFLSSIAGFSAL--------PSVSLYSASKGAINQMTKSLA 171

Query: 183 EETAFKFANENKIDLVSVIT 202
            E A      N +    ++T
Sbjct: 172 CEWAKDNIRVNSVAPGVILT 191

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 13/139 (9%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADL---- 67
           K   VTG    IG  + +     G +V      P   ++      +     FQ DL    
Sbjct: 6   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEV----AEAIGGAFFQVDLEDER 61

Query: 68  QVEGSFDKAVM---GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL 124
           +     ++A       D + + AA       +   +  + +   +N  + + ++L     
Sbjct: 62  ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVN--LTAPMHLSALAA 119

Query: 125 KSESVKRVVLTSSVSTITA 143
           +           +V+++  
Sbjct: 120 REMRKVGGGAIVNVASVQG 138

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 36/263 (13%), Positives = 74/263 (28%), Gaps = 46/263 (17%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRS-DRLRLFQADL--- 67
           K   +TG    IG  +    +E G  V  T R     +  +K   + D+++ FQ D    
Sbjct: 7   KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDE 66

Query: 68  -QVEGSFDKAV---MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKAC 123
                 FD           + + A         +     + +  ++   +       +  
Sbjct: 67  DGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRK--LLAVNLDGVFFGTRLG 124

Query: 124 LKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKAS-GWVYVLSKLLS 182
           ++               +  K        +           +    AS G V ++SK  +
Sbjct: 125 IQR--------------MKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAA 170

Query: 183 EETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVS-NR 241
            + A K  +         +      P    +       L+  + G  +  S  +      
Sbjct: 171 LDCALKDYD---------VRVNTVHPGYIKT------PLVDDLPGAEEAMSQRTKTPMGH 215

Query: 242 MGSIALVHIEDICNAHIFLMEND 264
           +G        DI    ++L  N+
Sbjct: 216 IGE-----PNDIAYICVYLASNE 233

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 13/142 (9%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQADL 67
           K   VTGA   IG    + LL +G  V     +            +     +    Q D+
Sbjct: 4   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV 63

Query: 68  ----QVEGSFDKAV--MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLK 121
               Q+  +F K V   G   +    A +  + N +  ++  + S +        L+ + 
Sbjct: 64  ADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVIS--GTYLGLDYMS 121

Query: 122 ACLKSESVKRVVLTSSVSTITA 143
                E    ++  SS++ +  
Sbjct: 122 KQNGGEGG-IIINMSSLAGLMP 142

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (92), Expect = 3e-04
 Identities = 24/137 (17%), Positives = 42/137 (30%), Gaps = 12/137 (8%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           K   VTG    IG+ +V+  +  G  V    +D    +   +            D+  E 
Sbjct: 7   KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQ--ELPGAVFILCDVTQED 64

Query: 72  SFDKAV-------MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL 124
                V          D V + A         ++      +  ++   +  T  L K  L
Sbjct: 65  DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFR-QLLELNLLGTYTLTKLAL 123

Query: 125 KS--ESVKRVVLTSSVS 139
               +S   V+  SS+ 
Sbjct: 124 PYLRKSQGNVINISSLV 140

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSD--RLRLFQADLQV 69
           T  VTG +  IG  +V+ L   G  V+   R+  +L       RS   ++     DL  
Sbjct: 9  CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS 68

Query: 70 EGSFDKAV 77
               + +
Sbjct: 69 RSERQELM 76

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 4/85 (4%)

Query: 12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADL-QVE 70
          K   +TGA   IG   ++   + G  + A   + G L+  ++   +  + +  AD   VE
Sbjct: 6  KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVE 65

Query: 71 GSFDKAVM---GCDGVFHVAASMEF 92
            F +A+      DGV H A     
Sbjct: 66 RGFAEALAHLGRLDGVVHYAGITRD 90

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 25/187 (13%), Positives = 53/187 (28%), Gaps = 26/187 (13%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSD--RLRLFQADLQV 69
           KT  VTG    IG  +V+     G ++H   R+  +L       +    ++     D  +
Sbjct: 9   KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL 68

Query: 70  EGSFDKAVMGC--------DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLK 121
               +K +           D + +   ++     +    E +      N  ++S  +L +
Sbjct: 69  RPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTN--LESAYHLSQ 126

Query: 122 ACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLL 181
                              + A                +           G +  L++ L
Sbjct: 127 LAHP--------------LLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNL 172

Query: 182 SEETAFK 188
           + E A  
Sbjct: 173 ACEWASD 179

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 29/188 (15%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSD-------RLRLFQ 64
           +   VTG    IG  +VK LLE G  V    R   +L+  +   +++       R+   Q
Sbjct: 13  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQ 72

Query: 65  ADLQVEGSFDKAV------MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLN 118
            +++ E   +  V       G      V       ++  ++I +     V+   +  T  
Sbjct: 73  CNIRNEEEVNNLVKSTLDTFGKINFL-VNNGGGQFLSPAEHISSKGWHAVLETNLTGTFY 131

Query: 119 LLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLS 178
           + KA   S   +                 G    ++  +       V +  A   VY L+
Sbjct: 132 MCKAVYSSWMKEHG---------------GSIVNIIVPTKAGFPLAVHSGAARAGVYNLT 176

Query: 179 KLLSEETA 186
           K L+ E A
Sbjct: 177 KSLALEWA 184

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 3/69 (4%)

Query: 12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSD---RLRLFQADLQ 68
          KT  VTG N  IG    + +   G  V    R        ++    +   + + +Q D+ 
Sbjct: 10 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVS 69

Query: 69 VEGSFDKAV 77
                K +
Sbjct: 70 NTDIVTKTI 78

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 22/141 (15%), Positives = 42/141 (29%), Gaps = 11/141 (7%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRD---PGKLQIFSKWTRSDRLRLFQADLQ 68
           K      A G IG    + L++R       +     P  L           +     D+ 
Sbjct: 6   KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVT 65

Query: 69  VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES 128
           V  +  K ++    +F    +++  IN    ++ +     I       +N   A L    
Sbjct: 66  VPVAESKKLL--KKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWD 123

Query: 129 VK------RVVLTSSVSTITA 143
            +       +    SV+   A
Sbjct: 124 KRKGGPGGIIANICSVTGFNA 144

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 1/129 (0%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK 75
           V G  G +GS +++   + GY V             +     ++    Q    +E +   
Sbjct: 7   VYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASS 66

Query: 76  AVMG-CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL 134
                 DGVF VA           +        +      S +    A    +    + L
Sbjct: 67  LQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQL 126

Query: 135 TSSVSTITA 143
           T + + +  
Sbjct: 127 TGAAAAMGP 135

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 37.8 bits (87), Expect = 0.001
 Identities = 19/99 (19%), Positives = 32/99 (32%), Gaps = 8/99 (8%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           KT  VTGA   IG   +      G  + A  R+   L        ++ +    AD+    
Sbjct: 6   KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAI-AVVADVSDPK 64

Query: 72  SFDKAVM-------GCDGVFHVAASMEFDINVKDNIETY 103
           + +              GV H A      ++    +E +
Sbjct: 65  AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAW 103

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 12/143 (8%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSD--RLRLFQADL-- 67
           K   VTGA   IG  + K L +    V    R            +S       +  D+  
Sbjct: 11  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK 70

Query: 68  --QVEGSFDKAVMGCDGVFHVAASMEFD-----INVKDNIETYVQSTVINPAIQSTLNLL 120
             ++    +K +     V  +  +         + +K++    V  T +N     T  + 
Sbjct: 71  KEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPIS 130

Query: 121 KACLKSESVKRVVLTSSVSTITA 143
           K  + +    R++  SS+  +T 
Sbjct: 131 KRMINNRY-GRIINISSIVGLTG 152

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 37.2 bits (85), Expect = 0.001
 Identities = 21/128 (16%), Positives = 34/128 (26%), Gaps = 3/128 (2%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSD-RLRLFQADLQVE 70
           K   V    G +G      L   G  V    R   K Q  +       ++ +  A+   +
Sbjct: 24  KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD 83

Query: 71  GSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK 130
            S  +AV G   VF   A     +           S  I     +   L    + +    
Sbjct: 84  ASRAEAVKGAHFVFTAGAIGLELLPQAAWQN--ESSIEIVADYNAQPPLGIGGIDATDKG 141

Query: 131 RVVLTSSV 138
           +       
Sbjct: 142 KEYGGKRA 149

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 8/107 (7%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADL---- 67
           K   V+G    +G+  V+ ++  G  V        + +  +    +D  R    D+    
Sbjct: 7   KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA-ELADAARYVHLDVTQPA 65

Query: 68  QVEGSFDKAVM---GCDGVFHVAASMEFDINVKDNIETYVQSTVINP 111
           Q + + D AV    G   + + A  +         +  + +   +N 
Sbjct: 66  QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNL 112

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 33/258 (12%), Positives = 76/258 (29%), Gaps = 47/258 (18%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADL---- 67
           K   +TG    IG  + +     G  +      P      +      R+   + D+    
Sbjct: 6   KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPG 65

Query: 68  QVEGSFDKAVM---GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL 124
            VE    + +     CD + + A         +   E + ++  IN  + S   + KA +
Sbjct: 66  DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEIN--VDSGFLMAKAFV 123

Query: 125 KSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKAS-GWVYVLSKLLSE 183
                              ++  G    +   +    I    +  ++       ++ L+ 
Sbjct: 124 PG---------------MKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALAS 168

Query: 184 ETAFKFANENKIDLVSVITTTVA-GPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRM 242
           +       +       +    +A     T++  +S           S  F +L ++   +
Sbjct: 169 D----LGKDG------ITVNAIAPSLVRTATTEAS---------ALSAMFDVLPNMLQAI 209

Query: 243 GSIALVHIEDICNAHIFL 260
             + +    D+  A  FL
Sbjct: 210 PRLQVP--LDLTGAAAFL 225

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 37.1 bits (85), Expect = 0.002
 Identities = 33/260 (12%), Positives = 66/260 (25%), Gaps = 31/260 (11%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           ++  VTG    +G      L  RGY V           +        R    +  +    
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQ 61

Query: 72  SFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKR 131
                           A           +E++ +   +N  +  T N+L+    +     
Sbjct: 62  EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVN--LLGTFNVLRLAAWAMRENP 119

Query: 132 VVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFAN 191
                    I    S   +   + ++                   L+   + E A     
Sbjct: 120 PDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVV--------ALTLPAARELA----- 166

Query: 192 ENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIE 251
              I +V+V       P L      +   L + +               R+G       E
Sbjct: 167 GWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVP-----------FPPRLGRP-----E 210

Query: 252 DICNAHIFLMENDRAQGQYI 271
           +     + ++EN    G+ +
Sbjct: 211 EYAALVLHILENPMLNGEVV 230

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 0.002
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ 49
          K   VTGA+  IG  +   L + G  V  T R    LQ
Sbjct: 15 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQ 52

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 9/66 (13%)

Query: 12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
          ++  VTG N  IG  + + L   G+ V  T R  G  +          L   + D+    
Sbjct: 8  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK---------GLFGVEVDVTDSD 58

Query: 72 SFDKAV 77
          + D+A 
Sbjct: 59 AVDRAF 64

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Length = 184

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

 Score = 36.4 bits (83), Expect = 0.002
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSK 53
          SKT+ V G  G  G      L  +G  V A   D  +++    
Sbjct: 1  SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD 42

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 36.7 bits (84), Expect = 0.002
 Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 8/106 (7%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG 71
           K   VTGA+  IG  + +TL  RG  V  T       Q  S +  ++       ++    
Sbjct: 5   KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKG-LMLNVTDPA 63

Query: 72  SFDKAVMGC-------DGVFHVAASMEFDINVKDNIETYVQSTVIN 110
           S +  +          D + + A     ++ ++   E +      N
Sbjct: 64  SIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETN 109

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 36.6 bits (84), Expect = 0.003
 Identities = 37/248 (14%), Positives = 68/248 (27%), Gaps = 22/248 (8%)

Query: 16  VTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSD--RLRLFQADLQVEGSF 73
           VTGA   IG  + + L + G  V    R    L+   K  R           D++     
Sbjct: 7   VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEI 66

Query: 74  DKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVV 133
           +        V  V      D+ V +N            A +  L++++  L         
Sbjct: 67  EAL---VAAV--VERYGPVDVLV-NNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 120

Query: 134 LTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN 193
           +  +   +                        ++  +   V   +K L  E A       
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYS-ASKHGVVGFTKALGLELA-----RT 174

Query: 194 KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVS-NRMGSIALVHIED 252
            I + +V    V  P   S         +  ++ +  F  I + V   R          +
Sbjct: 175 GITVNAVCPGFVETPMAASVREHYSD--IWEVSTEEAFDRITARVPIGRYVQ-----PSE 227

Query: 253 ICNAHIFL 260
           +     +L
Sbjct: 228 VAEMVAYL 235

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 36.6 bits (83), Expect = 0.003
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 12 KTFCVTGANGYIGSWLVKTLL---ERGYIVHATVRDPGKLQ 49
           +  +TG N  +G  LVK LL   +    +  T R+  + +
Sbjct: 3  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK 43

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 17/69 (24%), Positives = 23/69 (33%), Gaps = 2/69 (2%)

Query: 12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSD--RLRLFQADLQV 69
          K   VTGA G IG      L E G  +     +   L+      R      R +  D+  
Sbjct: 6  KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTS 65

Query: 70 EGSFDKAVM 78
          E +    V 
Sbjct: 66 EEAVIGTVD 74

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 16/93 (17%), Positives = 28/93 (30%), Gaps = 5/93 (5%)

Query: 12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ-IFSKWTRSDRLRLFQADLQVE 70
          K   V  A+  IG  +   L + G  V    R+   L+    ++   D  +      +  
Sbjct: 5  KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKV 64

Query: 71 GSFD----KAVMGCDGVFHVAASMEFDINVKDN 99
             D     A     G F    + +F   +   
Sbjct: 65 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSL 97

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 35.9 bits (82), Expect = 0.004
 Identities = 15/103 (14%), Positives = 25/103 (24%), Gaps = 11/103 (10%)

Query: 12  KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ----IFSKWTRSDRLRLFQADL 67
           +   +TG    +G      L   G  +         L+       +      +    AD+
Sbjct: 5   RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV 64

Query: 68  ----QVEGSFDKAVM---GCDGVFHVAASMEFDINVKDNIETY 103
               QVE             DG F+ A         +      
Sbjct: 65  SDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAE 107

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	348
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	100.0
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	100.0
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.97
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.97
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.96
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.95
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.95
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.94
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.91
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.89
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.89
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.89
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.88
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.88
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.88
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.88
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.88
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.88
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.87
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.87
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.87
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.87
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.87
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.87
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.87
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.86
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.86
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.86
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.85
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.85
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.85
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.85
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.85
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.85
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.85
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.85
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.84
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.84
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.84
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.83
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.83
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.83
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.83
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.83
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.83
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.83
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.83
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.83
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.82
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.82
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.82
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.82
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.81
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.8
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.8
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.79
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.78
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.78
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.78
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.75
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.75
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.75
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.75
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.74
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.72
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.72
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.72
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.7
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.68
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.64
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.61
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.61
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.57
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.51
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.49
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.41
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.63
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.58
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.53
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.48
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.36
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.34
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.34
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.3
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.28
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.21
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.2
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.18
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.14
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.12
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	98.07
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	98.02
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	98.02
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.99
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.98
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.94
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.92
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.92
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.89
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.88
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.87
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.82
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.82
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.82
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.73
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.72
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.66
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.59
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.57
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.57
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.54
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.51
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.49
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.48
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.44
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.41
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.37
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.35
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.28
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.27
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.26
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.25
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.24
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.17
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.17
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.16
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.15
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.11
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.11
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.06
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.04
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.96
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.93
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.92
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.88
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.86
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.83
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.8
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.8
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.77
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.74
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.72
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.72
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.7
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.68
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.66
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.65
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.65
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.64
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.64
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.6
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.6
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.58
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.58
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.54
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	96.51
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.5
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.48
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.48
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.45
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.44
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.42
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.41
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.39
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.37
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.31
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	96.27
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.26
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	96.22
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.22
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.22
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.19
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.17
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	96.13
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.1
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.07
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.05
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.93
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	95.85
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.83
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.8
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.74
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	95.73
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.69
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.56
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.56
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	95.55
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.45
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	95.44
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.43
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.43
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.42
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.4
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.39
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.39
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.39
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.36
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.28
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.19
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.18
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.17
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.13
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.09
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.98
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	94.97
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.81
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.72
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	94.71
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.59
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.58
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.55
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	94.51
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.46
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	94.44
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.42
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	94.35
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	94.27
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.26
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	94.23
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.19
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.17
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.14
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.1
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	94.08
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.05
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	93.98
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	93.94
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	93.93
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.85
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.83
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.79
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	93.76
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.72
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.72
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.64
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.61
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	93.44
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.37
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	93.29
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	93.24
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.19
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	93.17
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.17
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	93.0
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	92.94
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	92.81
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	92.77
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	92.72
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	92.59
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	92.46
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.19
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.08
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	91.9
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	91.85
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	91.16
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	91.09
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	90.94
d1xk7a1	402	Crotonobetainyl-CoA:carnitine CoA-transferase, Cai	90.77
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	90.59
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.97
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	89.58
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	89.5
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.19
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	88.63
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	87.97
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	87.87
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	87.68
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	87.23
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.11
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	86.92
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	86.66
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	86.61
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	86.28
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	85.74
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	85.63
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	85.59
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	85.56
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	85.19
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	85.14
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	84.72
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	84.6
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	84.59
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	84.31
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	84.3
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.17
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	83.99
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	83.75
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	83.63
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	83.59
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	83.34
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	83.31
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	83.29
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	83.15
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	82.97
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	82.75
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	82.72
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	81.86
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	81.86
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	81.83
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	81.67
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	81.42
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	81.23
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	80.68
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	80.33

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=1.4e-48  Score=348.51  Aligned_cols=302  Identities=20%  Similarity=0.234  Sum_probs=238.9

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeE------EEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIV------HATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V------~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      |||||||||||||++|+++|+++|++|      +++++.....  ..........+++++.+|+.+..........+|.|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            589999999999999999999999854      4454432211  11111223468999999999999888888899999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      +|+|+..........     + ...+++|+.++.+++++|.+.+ +++|||+||+++|+....     .+++|+++..  
T Consensus        81 i~~a~~~~~~~~~~~-----~-~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~~~-----~~~~E~~~~~--  146 (322)
T d1r6da_          81 VHFAAESHVDRSIAG-----A-SVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDS-----GSWTESSPLE--  146 (322)
T ss_dssp             EECCSCCCHHHHHHC-----C-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSS-----SCBCTTSCCC--
T ss_pred             Eeecccccccccccc-----h-HHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCCCC-----CCCCCCCCCC--
Confidence            999987655443333     3 3778999999999999999998 899999999997765544     5789988765  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCccccccccccCC
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSILSSVSNRM  242 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  242 (348)
                             |.+.|+.+|.++|.+++.++++++++++++||++||||++...  ..+. ++.++..+++..+  .+   .|+
T Consensus       147 -------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~--~~i~~~i~~~~~~~~i~v--~~---~g~  212 (322)
T d1r6da_         147 -------PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPL--YG---DGA  212 (322)
T ss_dssp             -------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT--SHHHHHHHHHHTTCCEEE--ET---TSC
T ss_pred             -------CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC--cHHHHHHHHHHcCCCcEE--ec---CCC
Confidence                   7789999999999999999999999999999999999987643  3443 3445666655333  23   455


Q ss_pred             CCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccChHHHH-Hc
Q 035965          243 GSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISSEKLK-DL  318 (348)
Q Consensus       243 ~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~L  318 (348)
                      +.|||+|++|+|+++..+++++..++.||++ ++++|+.|+++.+.+.++...........++  .....+|++|++ .|
T Consensus       213 ~~r~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  292 (322)
T d1r6da_         213 NVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIEREL  292 (322)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHH
T ss_pred             eEEccEEHHHHHHHHHHHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecCCCCCCCceeeeCHHHHHHHH
Confidence            8999999999999999999998888899875 5699999999999999986322222211121  456778999998 89


Q ss_pred             CCccccChhHHHHHHHHHHHHcC
Q 035965          319 GFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       319 G~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      ||+|+++++|+|+++++|++++.
T Consensus       293 g~~p~~~~eegI~~~i~w~~~n~  315 (322)
T d1r6da_         293 GYRPQVSFADGLARTVRWYRENR  315 (322)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHHCH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHhH
Confidence            99999999999999999999743

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.3e-49  Score=355.92  Aligned_cols=302  Identities=16%  Similarity=0.192  Sum_probs=229.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---c---ccc-ccCCCCCeEEEEccCCCcchHHHhhc--CCCE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---Q---IFS-KWTRSDRLRLFQADLQVEGSFDKAVM--GCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~---~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~   82 (348)
                      |+|||||||||||++|+++|+++|++|++++|..+..   .   +.. .....++++++.+|++|.+++.++++  .+|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            6899999999999999999999999999999964311   1   111 11234589999999999999999987  4699


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC--CcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE--SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      |||+|+..+...+..+     +. .++++|+.||.+|+++|++.+  ..++|||+||+++|+. +.    ..+++|+++.
T Consensus        82 v~h~aa~~~~~~~~~~-----~~-~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~-~~----~~~~~E~~~~  150 (357)
T d1db3a_          82 VYNLGAMSHVAVSFES-----PE-YTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGL-VQ----EIPQKETTPF  150 (357)
T ss_dssp             EEECCCCCTTTTTTSC-----HH-HHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTT-CC----SSSBCTTSCC
T ss_pred             EEEeecccccchhhhC-----HH-HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCC-CC----CCCcCCCCCC
Confidence            9999998776665556     64 789999999999999999875  2457999999986643 33    3589999875


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC--CchHHHHHhhhcCCCCcccccccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV--PSSIQVLLSPITGDSKFFSILSSV  238 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  238 (348)
                      .         |.++|+.||+++|.+++.++++++++++++||++||||+.....  ..+...+.+...+....+. .|  
T Consensus       151 ~---------P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~-~g--  218 (357)
T d1db3a_         151 Y---------PRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLY-LG--  218 (357)
T ss_dssp             C---------CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEE-ES--
T ss_pred             C---------CCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEE-EC--
Confidence            4         77899999999999999999999999999999999999765432  1223344455555554443 23  


Q ss_pred             ccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEE-eccCcChHHHHHHHHHhCCCCCC----Ccc--------cC----C
Q 035965          239 SNRMGSIALVHIEDICNAHIFLMENDRAQGQYIC-CVKSCPISEFIDHLKLEYPSSKM----QTF--------EG----E  301 (348)
Q Consensus       239 ~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~el~~~i~~~~~~~~~----~~~--------~~----~  301 (348)
                       .+++.|||+|++|+|+++..++++. .++.||+ +++.+|+.|+++++.+.+|....    +..        ..    .
T Consensus       219 -~~~~~r~~~~v~D~~~a~~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (357)
T d1db3a_         219 -NMDSLRDWGHAKDYVKMQWMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPG  296 (357)
T ss_dssp             -CTTCEECCEEHHHHHHHHHHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTT
T ss_pred             -CCCeeecceeechHHHHHHHHHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccc
Confidence             3458999999999999999999876 4577876 56799999999999999873110    000        00    0


Q ss_pred             C--------------CC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHH
Q 035965          302 N--------------QS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCV  338 (348)
Q Consensus       302 ~--------------~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~  338 (348)
                      .              ++  .....+|++|++ +|||+|+++|+|+|++++++..
T Consensus       297 ~~~~~~~~~~~~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l  350 (357)
T d1db3a_         297 VKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDL  350 (357)
T ss_dssp             CCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             cccCceeEeeccccCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence            0              00  233457999999 8999999999999999986543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-48  Score=345.70  Aligned_cols=301  Identities=16%  Similarity=0.184  Sum_probs=230.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      +|||||||||||||++|+++|+++|++|++++|..... ..........++++...|+.     ..++.++|+|||+|+.
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~~~~~d~VihlAa~   75 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV-----EPLYIEVDQIYHLASP   75 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTT-----SCCCCCCSEEEECCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHH-----HHHHcCCCEEEECccc
Confidence            47999999999999999999999999999999744322 11111122234555555544     3455689999999997


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      .....+..+     +. .++++|+.++.+|+++|++.+ + ++||+||+++|+....     .+++|+.+...++    .
T Consensus        76 ~~~~~~~~~-----~~-~~~~~Nv~g~~~ll~~~~~~~-~-k~I~~SS~~vy~~~~~-----~~~~e~~~~~~~~----~  138 (312)
T d2b69a1          76 ASPPNYMYN-----PI-KTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEV-----HPQSEDYWGHVNP----I  138 (312)
T ss_dssp             CSHHHHTTC-----HH-HHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSS-----SSBCTTCCCBCCS----S
T ss_pred             CCchhHHhC-----HH-HHHHHHHHHHHHHHHHHHHcC-C-cEEEEEChheecCCCC-----CCCCccccCCCCC----C
Confidence            665444444     54 788999999999999999988 4 8999999987664333     4677765433221    1


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCccccccccccCCCCccee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                      .|.+.|+.+|.++|.+++.++++++++++++||++||||+.......++. ++.+++.|++..+.  |   ++.+.|||+
T Consensus       139 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~--~---~g~~~r~~i  213 (312)
T d2b69a1         139 GPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY--G---SGSQTRAFQ  213 (312)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEE--S---SSCCEEECE
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEe--C---CCCeeEccE
Confidence            27789999999999999999999999999999999999987765444443 44566677654433  3   445889999


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccChHHHH-HcCCcccc
Q 035965          249 HIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISSEKLK-DLGFNYKH  324 (348)
Q Consensus       249 ~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~LG~~p~~  324 (348)
                      |++|+++++..++++. .++.||++ ++.+++.|+++++++.++. ..+..+.+.++  ......|++|++ .|||+|++
T Consensus       214 ~v~D~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~  291 (312)
T d2b69a1         214 YVSDLVNGLVALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGS-GSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVV  291 (312)
T ss_dssp             EHHHHHHHHHHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTC-CCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCS
T ss_pred             EHHHHHHHHHHHHhhc-cCCceEecCCcccchhhHHHHHHHHhCC-CCceEECCCCCCCCCeeeECHHHHHHHHCCCCCC
Confidence            9999999999998776 46678775 5699999999999999986 44444333322  456778999998 89999999


Q ss_pred             ChhHHHHHHHHHHHHc
Q 035965          325 GIEDIICQTIASCVDC  340 (348)
Q Consensus       325 ~~~e~l~~~~~~~~~~  340 (348)
                      +++|+|+++++|++++
T Consensus       292 ~l~~~I~~~i~w~~~~  307 (312)
T d2b69a1         292 PLEEGLNKAIHYFRKE  307 (312)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHH
Confidence            9999999999999764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.4e-48  Score=351.93  Aligned_cols=311  Identities=17%  Similarity=0.151  Sum_probs=231.9

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEE-EEcCCCcccc--ccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHA-TVRDPGKLQI--FSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHV   86 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~-~~r~~~~~~~--~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~   86 (348)
                      |||||||||||||++|+++|+++|++|++ +++.......  .......++++++.+|++|+..+..+++  ++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            58999999999999999999999998554 5543221111  1112234689999999999999998876  58999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC--------CcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE--------SVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--------~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      ||......+..+     |. .++++|+.|+.+++++|++.+        .+++|||+||..+|+....     .+..|..
T Consensus        81 Aa~~~~~~~~~~-----p~-~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~-----~~~~~~~  149 (361)
T d1kewa_          81 AAESHVDRSITG-----PA-AFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPH-----PDEVENS  149 (361)
T ss_dssp             CSCCCHHHHHHC-----TH-HHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCC-----GGGSCTT
T ss_pred             ccccchhhHHhC-----HH-HHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCcc-----CCccccc
Confidence            998665554445     54 789999999999999998764        2469999999997765543     1222211


Q ss_pred             CC-CcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHH-HHHhhhcCCCCcccccc
Q 035965          159 QT-PIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQ-VLLSPITGDSKFFSILS  236 (348)
Q Consensus       159 ~~-~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  236 (348)
                      .. +.........|.++||.+|+++|.+++.++++++++++++||++||||+....  ..+. ++.++..|++..+  .|
T Consensus       150 ~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~--~~i~~~i~~~~~g~~~~v--~g  225 (361)
T d1kewa_         150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPI--YG  225 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT--SHHHHHHHHHHHTCCEEE--ET
T ss_pred             cCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC--cHHHHHHHHHHcCCCcEE--eC
Confidence            11 11111112247889999999999999999999999999999999999987642  3433 4455666664333  33


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccCcChHHHHHHHHHhCCC-------CCCCcccCCCCC--CC
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC-VKSCPISEFIDHLKLEYPS-------SKMQTFEGENQS--SV  306 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~s~~el~~~i~~~~~~-------~~~~~~~~~~~~--~~  306 (348)
                         +|++.|||+|++|+|+++..++++...++.||++ ++..++.|+++.+.+.++.       ...+.......+  ..
T Consensus       226 ---~g~~~r~~i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (361)
T d1kewa_         226 ---KGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDR  302 (361)
T ss_dssp             ---TSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCC
T ss_pred             ---CCCeEEeCEEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCc
Confidence               4458999999999999999999998888899875 5689999999999886532       111111111111  45


Q ss_pred             ccccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          307 PSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       307 ~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      ...+|+++++ +|||+|+++++|+|+++++|++++
T Consensus       303 ~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n  337 (361)
T d1kewa_         303 RYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             BCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             eeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence            6788999999 799999999999999999999775

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.5e-47  Score=343.63  Aligned_cols=308  Identities=18%  Similarity=0.148  Sum_probs=235.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc--cccccc-cCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK--LQIFSK-WTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      .||||||||||||||++|+++|+++|++|.++.++...  ...... ....++++++.+|++|.+.+..+++..+.|+|+
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            37899999999999999999999999987666654211  111111 112358999999999999999999999999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCC-------CCCCcccCCCC
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSG-------EWRPVVDESCQ  159 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~-------~~~~~~~E~~~  159 (348)
                      |+......+..+     +. .++++|+.|+.++++++...+  .++|++||.++|+..+...       ......+|.+.
T Consensus        81 a~~~~~~~~~~~-----~~-~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~  152 (346)
T d1oc2a_          81 AAESHNDNSLND-----PS-PFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETN  152 (346)
T ss_dssp             CSCCCHHHHHHC-----CH-HHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSC
T ss_pred             hhcccccchhhC-----cc-cceeeehHhHHhhhhhhcccc--ccccccccceEecccCccccccccccCcccccccCCC
Confidence            998766554444     54 788999999999999999988  6899999998775432110       00122333332


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVS  239 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (348)
                      .         .|.+.|+.+|+++|.+++.++++++++++++||++||||+.... ..+...+.....+....+  .+   
T Consensus       153 ~---------~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i--~~---  217 (346)
T d1oc2a_         153 Y---------NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKL--YG---  217 (346)
T ss_dssp             C---------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEE--ET---
T ss_pred             C---------CCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeE--eC---
Confidence            2         37789999999999999999999999999999999999976543 233444555666655433  23   


Q ss_pred             cCCCCcceeeHHHHHHHHHHhhcCCCCCceEEE-eccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccChHHHH
Q 035965          240 NRMGSIALVHIEDICNAHIFLMENDRAQGQYIC-CVKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISSEKLK  316 (348)
Q Consensus       240 ~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  316 (348)
                      .+.+.|+|+|++|+|+++..+++++..++.|++ +++..++.|+++.+.+.++...........++  ...+..|++|++
T Consensus       218 ~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  297 (346)
T d1oc2a_         218 EGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLR  297 (346)
T ss_dssp             TSCCEEECEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHH
T ss_pred             CCCccccccchhhHHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHH
Confidence            344899999999999999999999988888865 56799999999999999987443333222222  345668999999


Q ss_pred             -HcCCcccc-ChhHHHHHHHHHHHHc
Q 035965          317 -DLGFNYKH-GIEDIICQTIASCVDC  340 (348)
Q Consensus       317 -~LG~~p~~-~~~e~l~~~~~~~~~~  340 (348)
                       .|||+|++ +|+|+|+++++|++++
T Consensus       298 ~~LGw~P~~t~l~e~i~~ti~w~~~n  323 (346)
T d1oc2a_         298 DELGWTPQFTDFSEGLEETIQWYTDN  323 (346)
T ss_dssp             HHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             HHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence             89999998 6999999999999874

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.2e-47  Score=341.84  Aligned_cols=308  Identities=16%  Similarity=0.159  Sum_probs=236.5

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccc-cCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHV   86 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~   86 (348)
                      |||||||||||||++|++.|+++||+|++++|.....  ..... ....++++++++|++|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            5799999999999999999999999999998743221  11111 1123579999999999999999987  79999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      ||......+..+     +. .++++|+.||.+++++|++.+ ++++|++||..+|+....     .+..|..+.      
T Consensus        81 Aa~~~~~~~~~~-----~~-~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~-----~~~~e~~~~------  142 (338)
T d1udca_          81 AGLKAVGESVQK-----PL-EYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPK-----IPYVESFPT------  142 (338)
T ss_dssp             CSCCCHHHHHHC-----HH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCS-----SSBCTTSCC------
T ss_pred             CCccchhhHHhC-----HH-HHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEccccc-----ccccccccc------
Confidence            997654443344     54 889999999999999999998 999999999987655544     344444322      


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHh-CCCcEEEEecCccccCCCCCC--------CCchHHHHHhhhcCCCCccccccc
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANE-NKIDLVSVITTTVAGPFLTSS--------VPSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                        ..|.++|+.+|..+|.++..+.++ .+++++++|++++|||+....        ...++..+.+...+....+.+.|.
T Consensus       143 --~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~  220 (338)
T d1udca_         143 --GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGN  220 (338)
T ss_dssp             --CCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECS
T ss_pred             --CCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCC
Confidence              137789999999999999976665 579999999999999965432        233555666666665545544433


Q ss_pred             c---ccCCCCcceeeHHHHHHHHHHhhcCCCC---CceEEEec-cCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCcc
Q 035965          238 V---SNRMGSIALVHIEDICNAHIFLMENDRA---QGQYICCV-KSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPS  308 (348)
Q Consensus       238 ~---~~~~~~r~~i~v~D~a~~~~~~~~~~~~---~~~y~~~~-~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~  308 (348)
                      .   ..+.+.|||+|++|++.++..++.....   +++||+++ +++|+.|+++.+.+.+|. .++..+.+.++  ....
T Consensus       221 ~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~  299 (338)
T d1udca_         221 DYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAY  299 (338)
T ss_dssp             CSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTS-CCCEEEECCCTTCCSBC
T ss_pred             CcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCC-CCceEECCCCCCCCCEe
Confidence            1   2355899999999999988887664332   34688854 589999999999999986 45544433332  4566


Q ss_pred             ccChHHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          309 VISSEKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       309 ~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      .+|++|++ .|||+|+++++|+|+++++|++++
T Consensus       300 ~~d~~k~~~~lgwkp~~~l~egi~~ti~w~~~~  332 (338)
T d1udca_         300 WADASKADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_dssp             CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             eECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhc
Confidence            78999999 799999999999999999999987

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.6e-47  Score=344.16  Aligned_cols=308  Identities=16%  Similarity=0.118  Sum_probs=232.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      +.|||||||||||||++|+++|+++||+|+++++.........    ....++..+|+.+.+.+..+++++|+|||+|+.
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~   89 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED----MFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD   89 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG----GTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh----cccCcEEEeechhHHHHHHHhhcCCeEeecccc
Confidence            5688999999999999999999999999999998655431111    135688999999999999999999999999987


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      .........     ........|+.++.+++++|++.+ +++|||+||..+++....     .+.+|......+  ....
T Consensus        90 ~~~~~~~~~-----~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~-----~~~~~~~~~~~e--~~~~  156 (363)
T d2c5aa1          90 MGGMGFIQS-----NHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQ-----LETTNVSLKESD--AWPA  156 (363)
T ss_dssp             CCCHHHHTT-----CHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGS-----SSSSSCEECGGG--GSSB
T ss_pred             ccccccccc-----ccccccccccchhhHHHHhHHhhC-cccccccccccccccccc-----cccccccccccc--CCcC
Confidence            655432222     234788999999999999999999 999999999987765544     233332211100  0011


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCc--hHHHHHhhhcCCCCccccccccccCCCCcce
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPS--SIQVLLSPITGDSKFFSILSSVSNRMGSIAL  247 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  247 (348)
                      .|.+.|+.+|+++|.+++.+.++++++++++||+++||+++......  .................   .+++|.+.|||
T Consensus       157 ~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~g~~~rd~  233 (363)
T d2c5aa1         157 EPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE---MWGDGLQTRSF  233 (363)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEE---EESCSCCEECC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCccccccccccccccccccccccccc---ccCCCCeEEEE
Confidence            26789999999999999999999999999999999999986643211  11111111111112222   22345589999


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEE-eccCcChHHHHHHHHHhCCCCCCCcccCCCCC-CCccccChHHHH-HcCCcccc
Q 035965          248 VHIEDICNAHIFLMENDRAQGQYIC-CVKSCPISEFIDHLKLEYPSSKMQTFEGENQS-SVPSVISSEKLK-DLGFNYKH  324 (348)
Q Consensus       248 i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~LG~~p~~  324 (348)
                      +|++|+++++..++++. .++.||+ +++.+|+.|+++++.+..+. ..++...+.+. ......|+++++ .|||+|++
T Consensus       234 i~v~D~~~~~~~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~-~~~i~~~~~~~~~~~~~~d~ska~~~LGw~p~~  311 (363)
T d2c5aa1         234 TFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEK-KLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNM  311 (363)
T ss_dssp             EEHHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTC-CCCEEEECCCCCCSBCEECCHHHHHHHSCCCCC
T ss_pred             eehhHHHHHHHHHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCC-CCceEeCCCCCCccccccCHHHHHHHhCCCCCC
Confidence            99999999999998875 5678876 56699999999999999986 44544333222 456678999999 79999999


Q ss_pred             ChhHHHHHHHHHHHH
Q 035965          325 GIEDIICQTIASCVD  339 (348)
Q Consensus       325 ~~~e~l~~~~~~~~~  339 (348)
                      +++|+|+++++|+++
T Consensus       312 sleegi~~ti~w~~~  326 (363)
T d2c5aa1         312 RLKEGLRITYFWIKE  326 (363)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
Confidence            999999999999965

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.4e-47  Score=341.39  Aligned_cols=305  Identities=19%  Similarity=0.158  Sum_probs=239.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cc---ccc--cCCCCCeEEEEccCCCcchHHHhhcCCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QI---FSK--WTRSDRLRLFQADLQVEGSFDKAVMGCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~---~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   81 (348)
                      +++|+|||||||||||++|+++|+++||+|++++|.....  ..   ...  ....+.++++.+|+.|...+.......+
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            3568999999999999999999999999999999744311  11   111  1122578999999999999888888999


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTP  161 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~  161 (348)
                      .|+|+++......+..+     +. ..+++|+.|+.+|+++|.+.+ +++|||+||.++|+....     .+++|+++..
T Consensus        94 ~v~~~~a~~~~~~~~~~-----~~-~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~-----~~~~E~~~~~  161 (341)
T d1sb8a_          94 YVLHQAALGSVPRSIND-----PI-TSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPG-----LPKVEDTIGK  161 (341)
T ss_dssp             EEEECCSCCCHHHHHHC-----HH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCC-----SSBCTTCCCC
T ss_pred             ccccccccccccccccC-----cc-chhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCCCC-----CCccCCCCCC
Confidence            99999987655443344     43 788999999999999999999 889999999997654433     6899988765


Q ss_pred             cchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC--CchH-HHHHhhhcCCCCcccccccc
Q 035965          162 IHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV--PSSI-QVLLSPITGDSKFFSILSSV  238 (348)
Q Consensus       162 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~  238 (348)
                               |.+.|+.+|.++|.+++.+++.++++++++||++|||++..+..  ..++ ..+..++.|++..+  .|  
T Consensus       162 ---------p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~--~g--  228 (341)
T d1sb8a_         162 ---------PLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYI--NG--  228 (341)
T ss_dssp             ---------CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEE--ES--
T ss_pred             ---------CCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEE--cC--
Confidence                     78899999999999999999999999999999999999876542  2333 34456666765433  33  


Q ss_pred             ccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEEe-ccCcChHHHHHHHHHhCCCCCCCccc----CCCCC--CCccc
Q 035965          239 SNRMGSIALVHIEDICNAHIFLMENDR--AQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFE----GENQS--SVPSV  309 (348)
Q Consensus       239 ~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~----~~~~~--~~~~~  309 (348)
                       .|.+.|||+|++|+|+++..++....  .++.|+++ ++..|+.|+++.|.+..+....+...    ...++  .....
T Consensus       229 -~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (341)
T d1sb8a_         229 -DGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSL  307 (341)
T ss_dssp             -SSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCC
T ss_pred             -CCCEEEEEEEEeccchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeee
Confidence             34589999999999999999887653  35578775 46999999999999988643322211    11111  34566


Q ss_pred             cChHHHH-HcCCccccChhHHHHHHHHHHHH
Q 035965          310 ISSEKLK-DLGFNYKHGIEDIICQTIASCVD  339 (348)
Q Consensus       310 ~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~  339 (348)
                      .|++|++ .|||+|+++++|+|+++++||++
T Consensus       308 ~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~  338 (341)
T d1sb8a_         308 ADISKAAKLLGYAPKYDVSAGVALAMPWYIM  338 (341)
T ss_dssp             BCCHHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred             eCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            8999999 79999999999999999999986

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.3e-46  Score=335.55  Aligned_cols=303  Identities=16%  Similarity=0.130  Sum_probs=233.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccc--cccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIF--SKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVA   87 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a   87 (348)
                      |+|||||||||||++|+++|+++||+|++++|........  ......++++++.+|++|...+.+.+.  ..++++|+|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            6899999999999999999999999999999976433111  111223579999999999999888765  467888888


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      +..........     +. .++..|+.|+.+++++|++.+..++|++.||.. +++...    ..+.+|+++..      
T Consensus        81 ~~~~~~~~~~~-----~~-~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~-~~~~~~----~~~~~E~~~~~------  143 (321)
T d1rpna_          81 AQSFVGASWNQ-----PV-TTGVVDGLGVTHLLEAIRQFSPETRFYQASTSE-MFGLIQ----AERQDENTPFY------  143 (321)
T ss_dssp             SCCCHHHHTTS-----HH-HHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGG-GGCSCS----SSSBCTTSCCC------
T ss_pred             ccccccccccc-----hH-HHHhhhhhchHHHHHHHHHhCCCcccccccchh-hcCccc----CCCCCCCCCcc------
Confidence            87665554344     43 789999999999999999998566788888876 454444    35678887765      


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC--CchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV--PSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                         |.+.|+.+|+++|.+++.++++++++++++||+++|||......  ..+...+.+...++...+. .|   ++++.|
T Consensus       144 ---p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~-~g---~g~~~r  216 (321)
T d1rpna_         144 ---PRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELR-LG---NVDAKR  216 (321)
T ss_dssp             ---CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEE-ES---CTTCEE
T ss_pred             ---ccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEE-EC---CCCeEE
Confidence               77899999999999999999999999999999999999755432  1233445555566554433 23   445899


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEE-eccCcChHHHHHHHHHhCCCCCCC---cccCCCCC--CCccccChHHHH-Hc
Q 035965          246 ALVHIEDICNAHIFLMENDRAQGQYIC-CVKSCPISEFIDHLKLEYPSSKMQ---TFEGENQS--SVPSVISSEKLK-DL  318 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~el~~~i~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~-~L  318 (348)
                      +|+|++|+|+++..+++++.. +.||+ +++..|+.++++.+.+..+....+   ......++  ......|++|++ .|
T Consensus       217 ~~i~v~D~~~~~~~~~~~~~~-~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~l  295 (321)
T d1rpna_         217 DWGFAGDYVEAMWLMLQQDKA-DDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVL  295 (321)
T ss_dssp             ECEEHHHHHHHHHHHHHSSSC-CCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHH
T ss_pred             ccEEeHHHHHHHHHHHhcCCc-CCceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHH
Confidence            999999999999999998754 55655 677999999999999998752111   11111122  345677999999 79


Q ss_pred             CCccccChhHHHHHHHHHHHH
Q 035965          319 GFNYKHGIEDIICQTIASCVD  339 (348)
Q Consensus       319 G~~p~~~~~e~l~~~~~~~~~  339 (348)
                      ||+|+++++|+|+++++|+++
T Consensus       296 G~~P~~~l~e~i~~tv~~~l~  316 (321)
T d1rpna_         296 GWKPRTSLDELIRMMVEADLR  316 (321)
T ss_dssp             CCCCCSCHHHHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHHHHHH
Confidence            999999999999999999875

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-45  Score=329.16  Aligned_cols=311  Identities=15%  Similarity=0.175  Sum_probs=234.7

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc----c----cccc-cCCCCCeEEEEccCCCcchHHHhhc--
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL----Q----IFSK-WTRSDRLRLFQADLQVEGSFDKAVM--   78 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~----~----~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~--   78 (348)
                      |.|||||||||||||++|+++|+++|++|++++|.....    .    .... .....+++++.+|++|.+.+.+++.  
T Consensus         1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc
Confidence            347999999999999999999999999999998632211    0    0000 0123578999999999999988776  


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      ++++|+|+||......+..+     |. .+++.|+.++.++++++++.+ +++|+|+||+.+++....    .....+..
T Consensus        81 ~~~~i~h~Aa~~~~~~~~~~-----p~-~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~----~~~~~~~~  149 (346)
T d1ek6a_          81 SFMAVIHFAGLKAVGESVQK-----PL-DYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQY----LPLDEAHP  149 (346)
T ss_dssp             CEEEEEECCSCCCHHHHHHC-----HH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSS----SSBCTTSC
T ss_pred             ccccccccccccCcHhhHhC-----HH-HHHHhhhcccccccchhhhcC-cccccccccceeeecccc----cccccccc
Confidence            46689999998776655555     65 789999999999999999999 999999999987665443    11222221


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-CCCcEEEEecCccccCCCCCC--------CCchHHHHHhhhcCCC
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-NKIDLVSVITTTVAGPFLTSS--------VPSSIQVLLSPITGDS  229 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~  229 (348)
                      .         ..+.++|+.+|..+|..+..+++. .+++.+++||+++|||.....        ....+..+...+.+..
T Consensus       150 ~---------~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (346)
T d1ek6a_         150 T---------GGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRR  220 (346)
T ss_dssp             C---------CCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSS
T ss_pred             c---------cccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCC
Confidence            1         126678999999999999998776 589999999999999865421        2234445555555554


Q ss_pred             Cccccccc---cccCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCC
Q 035965          230 KFFSILSS---VSNRMGSIALVHIEDICNAHIFLMENDR---AQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGEN  302 (348)
Q Consensus       230 ~~~~~~~~---~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~  302 (348)
                      ..+.+.|.   ...+.+.|||+|++|+|+++..+++...   .+++||++ ++.+|+.|+++.|.+.++. ..+..+.+.
T Consensus       221 ~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~-~~~~~~~~~  299 (346)
T d1ek6a_         221 EALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK-KIPYKVVAR  299 (346)
T ss_dssp             SCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCS-CCCEEEECC
T ss_pred             CcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCC-CCCeEECCC
Confidence            44443332   2346689999999999999988765432   34578875 5699999999999999986 555444333


Q ss_pred             CC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcC
Q 035965          303 QS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       303 ~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      ++  ......|++|++ .|||+|+++++|+|+++++|++++.
T Consensus       300 ~~~e~~~~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n~  341 (346)
T d1ek6a_         300 REGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNP  341 (346)
T ss_dssp             CTTCCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             CCCCCCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCH
Confidence            33  456678999999 7999999999999999999999864

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.7e-45  Score=328.89  Aligned_cols=307  Identities=17%  Similarity=0.224  Sum_probs=231.2

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHH-hhcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDK-AVMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~Vih~a~   88 (348)
                      |||||||||||||++|+++|+++| ++|+++++..... ....    .++++++.+|+++.+.+.+ +.+++|+|||+|+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~----~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~   76 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----HPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----CTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc----CCCeEEEECccCChHHHHHHHHhCCCccccccc
Confidence            589999999999999999999999 5899999865433 2222    3589999999998877655 6678999999999


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      .........+     +. .++..|+.|+.+++++|.+.+  .+++|+||..+|+....     ...+|......  ..+.
T Consensus        77 ~~~~~~~~~~-----~~-~~~~~nv~gt~~ll~~~~~~~--~~~~~~ss~~~~~~~~~-----~~~~~~~~~~~--~~~~  141 (342)
T d2blla1          77 IATPIEYTRN-----PL-RVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSD-----KYFDEDHSNLI--VGPV  141 (342)
T ss_dssp             CCCHHHHHHS-----HH-HHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCC-----SSBCTTTCCCB--CCCT
T ss_pred             cccccccccC-----Cc-ccccccccccccccccccccc--ccccccccccccccccc-----ccccccccccc--cccc
Confidence            8766554444     43 789999999999999999988  56788888886665544     34444332221  1122


Q ss_pred             CCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC------C-chHHHHHhhhcCCCCccccccccccC
Q 035965          169 KASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV------P-SSIQVLLSPITGDSKFFSILSSVSNR  241 (348)
Q Consensus       169 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (348)
                      ..|.+.|+.||.++|.+++.+++.++++++++|++.+|||......      . ....++.+.+.|++..+.  +   +|
T Consensus       142 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~---~g  216 (342)
T d2blla1         142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLI--D---GG  216 (342)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEG--G---GS
T ss_pred             CCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCcccc--C---CC
Confidence            3477899999999999999999999999999999999999654421      1 123445567777764443  2   34


Q ss_pred             CCCcceeeHHHHHHHHHHhhcCCC---CCceEEEe-cc-CcChHHHHHHHHHhCCCCCCCcccCCC-----------C--
Q 035965          242 MGSIALVHIEDICNAHIFLMENDR---AQGQYICC-VK-SCPISEFIDHLKLEYPSSKMQTFEGEN-----------Q--  303 (348)
Q Consensus       242 ~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~-~~-~~s~~el~~~i~~~~~~~~~~~~~~~~-----------~--  303 (348)
                      ++.|+|+|++|+|+++..+++++.   .+++||++ ++ .+|+.|+++.+.+.++...........           .  
T Consensus       217 ~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (342)
T d2blla1         217 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGK  296 (342)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC--------
T ss_pred             CeeeeecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceecccccccc
Confidence            589999999999999999998753   25579874 55 589999999999987642221111000           0  


Q ss_pred             ---CCCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcCC
Q 035965          304 ---SSVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCGF  342 (348)
Q Consensus       304 ---~~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~~  342 (348)
                         .......|++|++ +|||+|+++++|+|+++++||+++.-
T Consensus       297 ~~~~~~~~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~~~  339 (342)
T d2blla1         297 GYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD  339 (342)
T ss_dssp             ----CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred             ccccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCcC
Confidence               0234567999999 89999999999999999999987654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-45  Score=327.95  Aligned_cols=303  Identities=18%  Similarity=0.166  Sum_probs=225.4

Q ss_pred             CeE-EEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---ccccc-----cCCCCCeEEEEccCCCcchHHHhhc--CC
Q 035965           12 KTF-CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSK-----WTRSDRLRLFQADLQVEGSFDKAVM--GC   80 (348)
Q Consensus        12 ~~i-lVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~--~~   80 (348)
                      ||| ||||||||||+||+++|+++||+|++++|..+..   ....+     .....+++++.+|++|.+.+..+++  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            578 9999999999999999999999999999965421   11111     1122478999999999999998876  57


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC--CcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE--SVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      ++|+|+++......+...     +. .++++|+.||.+++++|++.+  ..++|||+||.++|+. ..    ..+++|++
T Consensus        81 ~~v~~~~a~~~~~~~~~~-----~~-~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~-~~----~~~~~E~~  149 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDL-----AE-YTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGK-VQ----EIPQKETT  149 (347)
T ss_dssp             SEEEECCSCCCHHHHHHS-----HH-HHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCS-CS----SSSBCTTS
T ss_pred             ceeeeeeeccccchhhcc-----ch-hhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecC-CC----CCCCCCCC
Confidence            899999987665443333     43 678999999999999999876  2358999999987653 33    35889988


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCC--CchHHHHHhhhcCCCCcccccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSV--PSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                      +..         |.++|+.||+++|.+++.++++++++++++||+++|||......  ......+.....+...... .|
T Consensus       150 ~~~---------P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~-~g  219 (347)
T d1t2aa_         150 PFY---------PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFS-LG  219 (347)
T ss_dssp             CCC---------CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEE-ES
T ss_pred             CCC---------CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceee-cC
Confidence            765         78899999999999999999999999999999999999765432  1122223333333332222 23


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCCcc--------cC--------
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQTF--------EG--------  300 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~~~--------~~--------  300 (348)
                         ++++.|+|+|++|+|+++..++++......+.......++.+....+...++.......        ..        
T Consensus       220 ---~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
T d1t2aa_         220 ---NLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVT  296 (347)
T ss_dssp             ---CTTCEECCEEHHHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEE
T ss_pred             ---CCcceeeeeEecHHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceee
Confidence               34589999999999999999999875443344566799999999999888875211100        00        


Q ss_pred             ----CCCC--CCccccChHHHH-HcCCccccChhHHHHHHHHHHH
Q 035965          301 ----ENQS--SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCV  338 (348)
Q Consensus       301 ----~~~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~  338 (348)
                          ..++  ...+.+|++|++ +|||+|+++|+|+|+++++|..
T Consensus       297 ~~~~~~rp~~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~~  341 (347)
T d1t2aa_         297 VDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADV  341 (347)
T ss_dssp             ECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             ecccCCCCCCcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence                0011  234567999999 7999999999999999987643

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-44  Score=326.42  Aligned_cols=312  Identities=15%  Similarity=0.134  Sum_probs=235.2

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccc-cCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHV   86 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~   86 (348)
                      |.|||||||||||+||+++|+++|++|+++++.....  ..... .....+++++.+|++|.+.+..+++  ++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            5699999999999999999999999999998743321  11111 1123578999999999999998876  79999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      ||..........     +. .+..+|+.++.+++++|++.+ +++|||+||..+|+..... +...+++|+.+..     
T Consensus        82 Aa~~~~~~~~~~-----~~-~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~-~~~~~~~e~~~~~-----  148 (347)
T d1z45a2          82 AGLKAVGESTQI-----PL-RYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRF-PNMIPIPEECPLG-----  148 (347)
T ss_dssp             CSCCCHHHHHHS-----HH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGS-TTCCSBCTTSCCC-----
T ss_pred             cccccccccccC-----cc-cccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccC-CCCCccccccCCC-----
Confidence            998765543344     43 788999999999999999988 9999999999987755431 1134677776544     


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHh--CCCcEEEEecCccccCCCCCC--------CCchHHHHHhhhcCCCCcccccc
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANE--NKIDLVSVITTTVAGPFLTSS--------VPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                          |.+.|+.+|.++|.+++.+.+.  .+++++++||+++||+.....        ...++..+.....+....+.+.|
T Consensus       149 ----p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g  224 (347)
T d1z45a2         149 ----PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFG  224 (347)
T ss_dssp             ----CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC-
T ss_pred             ----CCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeC
Confidence                7789999999999999998764  579999999999999854321        22355566666665554444333


Q ss_pred             cc---ccCCCCcceeeHHHHHHHHHHhhcCCC-------CCceEEEe-ccCcChHHHHHHHHHhCCCCCCCcccCCCCC-
Q 035965          237 SV---SNRMGSIALVHIEDICNAHIFLMENDR-------AQGQYICC-VKSCPISEFIDHLKLEYPSSKMQTFEGENQS-  304 (348)
Q Consensus       237 ~~---~~~~~~r~~i~v~D~a~~~~~~~~~~~-------~~~~y~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~-  304 (348)
                      ..   ..+...||++++.|++.+++.+++...       ..+.||++ ++++|+.|+++.+.+.++. +++......++ 
T Consensus       225 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~  303 (347)
T d1z45a2         225 DDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI-DLPYKVTGRRAG  303 (347)
T ss_dssp             -----CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTC-CCCC--------
T ss_pred             CCccccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCC-CCceEeCCCCCC
Confidence            32   233468899999999999988876421       24468875 5699999999999999986 55544433332 


Q ss_pred             -CCccccChHHHH-HcCCccccChhHHHHHHHHHHHHcC
Q 035965          305 -SVPSVISSEKLK-DLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       305 -~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                       ......|++|++ +|||+|+++++|+|+++++|++++.
T Consensus       304 ~~~~~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~~~np  342 (347)
T d1z45a2         304 DVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENP  342 (347)
T ss_dssp             -CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             CCCEeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHhCh
Confidence             456678999999 7999999999999999999999873

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=8.5e-45  Score=326.05  Aligned_cols=304  Identities=17%  Similarity=0.157  Sum_probs=230.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---cccccc-----CCCCCeEEEEccCCCcchHHHhhc--CC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSKW-----TRSDRLRLFQADLQVEGSFDKAVM--GC   80 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~--~~   80 (348)
                      +|++||||||||||+||+++|+++||+|++++|..+..   .+..+.     .....++++.+|+++.+.+...++  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            47899999999999999999999999999999964321   111111     122467899999999999988775  68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC----CcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE----SVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |+|||+|+......+...     |. ..+..|+.++.+++++++...    ...++++.||..++ ...     ..+.+|
T Consensus        81 D~Vih~Aa~~~~~~~~~~-----p~-~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~-~~~-----~~~~~E  148 (339)
T d1n7ha_          81 DEVYNLAAQSHVAVSFEI-----PD-YTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMF-GST-----PPPQSE  148 (339)
T ss_dssp             SEEEECCSCCCHHHHHHS-----HH-HHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGG-TTS-----CSSBCT
T ss_pred             chhhhccccccccccccC-----cc-ccccccccccchhhhhhhhcccccccceeeeecccceec-ccC-----CCCCCC
Confidence            999999998665543344     54 788999999999999998643    13467777776643 222     247888


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCC--chHHHHHhhhcCCCCcccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVP--SSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~  234 (348)
                      +++..         |.+.|+.+|+++|.++..+++.++++++++||++||||.......  .+...+.....+....+. 
T Consensus       149 ~~~~~---------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~-  218 (339)
T d1n7ha_         149 TTPFH---------PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLF-  218 (339)
T ss_dssp             TSCCC---------CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEE-
T ss_pred             CCCCC---------CcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEE-
Confidence            88765         788999999999999999999999999999999999997654321  122223344444443332 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEeccCcChHHHHHHHHHhCCCCCCC---cccCCCCC--CCccc
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVKSCPISEFIDHLKLEYPSSKMQ---TFEGENQS--SVPSV  309 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~~~s~~el~~~i~~~~~~~~~~---~~~~~~~~--~~~~~  309 (348)
                      .|.   +.+.|||+|++|+|+++..+++++..++.+++.+.+.++.++++.+.+.++.....   ......++  ...+.
T Consensus       219 ~g~---~~~~rd~~~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  295 (339)
T d1n7ha_         219 LGN---LQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQ  295 (339)
T ss_dssp             ESC---TTCEEECEEHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCC
T ss_pred             eCC---CCccccceeeehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeee
Confidence            333   34899999999999999999999877777777888999999999999999862211   11111122  34566


Q ss_pred             cChHHHH-HcCCccccChhHHHHHHHHHHHH
Q 035965          310 ISSEKLK-DLGFNYKHGIEDIICQTIASCVD  339 (348)
Q Consensus       310 ~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~  339 (348)
                      .|++|++ .|||+|+++|+|+|+++++|+++
T Consensus       296 ~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~  326 (339)
T d1n7ha_         296 GDASKAKEVLGWKPQVGFEKLVKMMVDEDLE  326 (339)
T ss_dssp             BCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             ECHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            7999999 79999999999999999999965

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.8e-44  Score=320.81  Aligned_cols=293  Identities=15%  Similarity=0.169  Sum_probs=218.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~   88 (348)
                      +|||||||||||||++|+++|+++|+.|+++++...                  .|+.|.+.+.++++  .+|.|+|+|+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~------------------~~~~~~~~~~~~~~~~~~d~v~~~a~   63 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE------------------LNLLDSRAVHDFFASERIDQVYLAAA   63 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT------------------CCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh------------------ccccCHHHHHHHHhhcCCCEEEEcch
Confidence            579999999999999999999999999987765432                  68888888888775  5899999997


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      ..........     ....++++|+.+|.+++++|.+.+ +++|||+||.++|+....     .+++|+.+.....    
T Consensus        64 ~~~~~~~~~~-----~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~-----~~~~E~~~~~~~~----  128 (315)
T d1e6ua_          64 KVGGIVANNT-----YPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAK-----QPMAESELLQGTL----  128 (315)
T ss_dssp             CCCCHHHHHH-----CHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCC-----SSBCGGGTTSSCC----
T ss_pred             hccccccchh-----hHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCC-----CCccCCccccCCC----
Confidence            7543321111     224678899999999999999998 999999999997764433     4677765433211    


Q ss_pred             CCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCC--chHHH----HHhhhcCCCCccccccccccCC
Q 035965          169 KASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVP--SSIQV----LLSPITGDSKFFSILSSVSNRM  242 (348)
Q Consensus       169 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~  242 (348)
                      .+|.++|+.||+++|.+++.+.++++++++++||++||||++.....  .....    ...........+...|.   +.
T Consensus       129 ~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---g~  205 (315)
T d1e6ua_         129 EPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGS---GT  205 (315)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESC---SC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCC---Cc
Confidence            12456899999999999999999999999999999999998764421  11111    11111112222332333   34


Q ss_pred             CCcceeeHHHHHHHHHHhhcCCC---------CCceEEE-eccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCcccc
Q 035965          243 GSIALVHIEDICNAHIFLMENDR---------AQGQYIC-CVKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVI  310 (348)
Q Consensus       243 ~~r~~i~v~D~a~~~~~~~~~~~---------~~~~y~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~  310 (348)
                      +.|+|+|++|+++++..++++..         ..+.++. ++...++.++++.+.+.++.. ..+.+...++  .....+
T Consensus       206 ~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~-~~i~~~~~~~~~~~~~~~  284 (315)
T d1e6ua_         206 PMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYK-GRVVFDASKPDGTPRKLL  284 (315)
T ss_dssp             CEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCC-SEEEEETTSCCCCSBCCB
T ss_pred             eEEEEEEeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCC-cceEECCCCCCCCceecc
Confidence            78999999999999999987642         2335665 566899999999999998763 3322222222  345678


Q ss_pred             ChHHHHHcCCccccChhHHHHHHHHHHHHc
Q 035965          311 SSEKLKDLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       311 ~~~~~~~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      |++++++|||+|+++++|+|+++++||+++
T Consensus       285 d~sk~k~Lg~~p~~~l~e~i~~ti~w~~~N  314 (315)
T d1e6ua_         285 DVTRLHQLGWYHEISLEAGLASTYQWFLEN  314 (315)
T ss_dssp             CCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHcCCCCCCCHHHHHHHHHHHHHHc
Confidence            999999999999999999999999999976

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.4e-44  Score=326.75  Aligned_cols=317  Identities=14%  Similarity=0.093  Sum_probs=223.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC----------cc-cccc-------c-cCCCCCeEEEEccCCCcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG----------KL-QIFS-------K-WTRSDRLRLFQADLQVEG   71 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~----------~~-~~~~-------~-~~~~~~~~~~~~Dl~d~~   71 (348)
                      +|||||||||||||++|+++|+++||+|+++|+-..          .. ....       . ....++++++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            579999999999999999999999999999973110          00 0000       0 001357899999999999


Q ss_pred             hHHHhhc--CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCC
Q 035965           72 SFDKAVM--GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGE  149 (348)
Q Consensus        72 ~~~~~~~--~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~  149 (348)
                      .+..+++  ++|+|||+||......+..+..   ....+++.|+.||.+++++|++.+..++++++||..+++....   
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~---~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~---  154 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRS---RAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI---  154 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHH---HHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS---
T ss_pred             HHHHHHHhhcchheecccccccccccccccc---ccccccccccccccHHHHHHHHhccccceeecccccccccccc---
Confidence            9999987  5799999999765544322200   1136789999999999999999884556777777764433222   


Q ss_pred             CCCcccCCCCCC-----cchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC-----------
Q 035965          150 WRPVVDESCQTP-----IHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS-----------  213 (348)
Q Consensus       150 ~~~~~~E~~~~~-----~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~-----------  213 (348)
                         +..|.....     .+.......|.+.|+.+|+++|.++..++++++++++++||++||||+....           
T Consensus       155 ---~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  231 (393)
T d1i24a_         155 ---DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLD  231 (393)
T ss_dssp             ---CBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCC
T ss_pred             ---ccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccc
Confidence               222211100     0001112337789999999999999999999999999999999999976532           


Q ss_pred             ----CCch-HHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceE---EEeccCcChHHHHHH
Q 035965          214 ----VPSS-IQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQY---ICCVKSCPISEFIDH  285 (348)
Q Consensus       214 ----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y---~~~~~~~s~~el~~~  285 (348)
                          .... ..++.+...+.+..+  .|   ++.+.|||+|++|+|+++..+++++...+.|   +.+++.+|+.|++++
T Consensus       232 ~~~~~~~~i~~~~~~~~~~~~~~i--~g---~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~  306 (393)
T d1i24a_         232 YDAVFGTALNRFCVQAAVGHPLTV--YG---KGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASL  306 (393)
T ss_dssp             CSTTTCCHHHHHHHHHHHTCCEEE--ET---TSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHH
T ss_pred             cccccccchhhhhHHhhcCCeeEE--ee---ecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHH
Confidence                0112 233445555654333  33   3448999999999999999999988776654   344568999999999


Q ss_pred             HHHhCCCCC--CCccc--CCCCC--CCccccChHHHHHcCCccccChhHHHHHHHHHHHHcC
Q 035965          286 LKLEYPSSK--MQTFE--GENQS--SVPSVISSEKLKDLGFNYKHGIEDIICQTIASCVDCG  341 (348)
Q Consensus       286 i~~~~~~~~--~~~~~--~~~~~--~~~~~~~~~~~~~LG~~p~~~~~e~l~~~~~~~~~~~  341 (348)
                      +.+..+...  ++...  .+..+  ......|++++++|||+|+++++++++++++|+++..
T Consensus       307 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~k  368 (393)
T d1i24a_         307 VTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFK  368 (393)
T ss_dssp             HHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTG
T ss_pred             HHHHHHhhCCCcceeeccCCCCCCCccEecCCHHHHHHcCCccccCHHHHHHHHHHHHHHHH
Confidence            988754322  22211  11111  4456778999999999999999999999999997753

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=1.2e-42  Score=317.20  Aligned_cols=313  Identities=18%  Similarity=0.191  Sum_probs=225.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHH-CCCeEEEEEcCCCc---c-ccc---------------cccCCCCCeEEEEccCCCc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLE-RGYIVHATVRDPGK---L-QIF---------------SKWTRSDRLRLFQADLQVE   70 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~-~g~~V~~~~r~~~~---~-~~~---------------~~~~~~~~~~~~~~Dl~d~   70 (348)
                      .|||||||||||||++|+++|++ .||+|+++++-...   . ...               ........+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            35899999999999999999986 68999999851110   0 000               0001124678999999999


Q ss_pred             chHHHhhc---CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCC
Q 035965           71 GSFDKAVM---GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSS  147 (348)
Q Consensus        71 ~~~~~~~~---~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~  147 (348)
                      +.+.++++   ++|+|||+|+........+.     +. .+.+.|+.++.++++++++.+ +++++++||..+++.....
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~-----~~-~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~  154 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRD-----PL-KYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMG  154 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHC-----HH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-
T ss_pred             HHhhhhhhccceeehhhcccccccccccccc-----cc-cccccccccccccchhhhccC-Ccccccccccccccccccc
Confidence            99988875   57999999998665543333     43 778999999999999999999 8999999998866544331


Q ss_pred             C--CCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCc-------hH
Q 035965          148 G--EWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPS-------SI  218 (348)
Q Consensus       148 ~--~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~-------~~  218 (348)
                      .  ....++.|++..         .|.++|+.+|+.+|.+++.+.+.++++++++||+++|||+.......       .+
T Consensus       155 ~~~~~~~~~~e~~~~---------~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~i  225 (383)
T d1gy8a_         155 SVSTNAEPIDINAKK---------SPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLI  225 (383)
T ss_dssp             ----CCCCBCTTSCC---------BCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHH
T ss_pred             cccccccccccccCC---------CCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhH
Confidence            1  001234444433         27889999999999999999999999999999999999987754221       12


Q ss_pred             HHH-Hhhh----cCCC----------Cccccccc---cccCCCCcceeeHHHHHHHHHHhhcCC---------CCCceEE
Q 035965          219 QVL-LSPI----TGDS----------KFFSILSS---VSNRMGSIALVHIEDICNAHIFLMEND---------RAQGQYI  271 (348)
Q Consensus       219 ~~~-~~~~----~~~~----------~~~~~~~~---~~~~~~~r~~i~v~D~a~~~~~~~~~~---------~~~~~y~  271 (348)
                      ..+ .+..    .+..          ..+...|.   ...|.+.|||+|++|+|+++..+++..         ...++||
T Consensus       226 p~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~N  305 (383)
T d1gy8a_         226 PIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFN  305 (383)
T ss_dssp             HHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEE
T ss_pred             HHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEE
Confidence            111 1111    1111          11111121   123568999999999999999988742         1234688


Q ss_pred             E-eccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccccChHHHH-HcCCccccChhHHHHHH-HHHHHHc
Q 035965          272 C-CVKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSVISSEKLK-DLGFNYKHGIEDIICQT-IASCVDC  340 (348)
Q Consensus       272 ~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~LG~~p~~~~~e~l~~~-~~~~~~~  340 (348)
                      + +++++|+.|+++++.+..+. +.+......++  ......|++|++ +|||+|+++++|+|+++ +.|++.+
T Consensus       306 i~s~~~~s~~el~~~i~~~~~~-~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~  378 (383)
T d1gy8a_         306 LGTSRGYSVREVIEVARKTTGH-PIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (383)
T ss_dssp             ESCSCCEEHHHHHHHHHHHHCC-CCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             eCCCCceeHHHHHHHHHHHhCC-CCceEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhC
Confidence            7 46699999999999999886 44444333332  456677999999 79999999999999887 5788765

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=3.7e-42  Score=309.09  Aligned_cols=313  Identities=27%  Similarity=0.301  Sum_probs=229.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc---cCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK---WTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      ..+|+|||||||||||++|+++|+++||+|++++|+..+. .+...   ........++.+|+.|.+++..++.++|+|+
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~   88 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence            3478999999999999999999999999999999976543 22211   1122334567899999999999999999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      |+++......         ....++..|+.||.+++++|.+.+.+++|||+||+.+++...... .....+|+.+.....
T Consensus        89 ~~a~~~~~~~---------~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~-~~~~~~e~~~~~~~~  158 (342)
T d1y1pa1          89 HIASVVSFSN---------KYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNV-EGIYLDEKSWNLESI  158 (342)
T ss_dssp             ECCCCCSCCS---------CHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTC-CCCEECTTCCCHHHH
T ss_pred             hhcccccccc---------cccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCC-CCccccccccccccc
Confidence            9999765433         224778899999999999999976599999999987554433211 123455554432211


Q ss_pred             h-------hccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCC--CchHHHHHhhhcCCCCccc
Q 035965          165 V-------WNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSV--PSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       165 ~-------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~  233 (348)
                      .       .....|.+.|+.+|..+|.+++.|++++  ++.++++||+.+|||...+..  ......+...+.+......
T Consensus       159 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~  238 (342)
T d1y1pa1         159 DKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL  238 (342)
T ss_dssp             HHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH
T ss_pred             cccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc
Confidence            1       1122356789999999999999998875  477899999999999654432  2233445556666544332


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceE-EEeccCcChHHHHHHHHHhCCCCCCCcccCCCCC---CCccc
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQY-ICCVKSCPISEFIDHLKLEYPSSKMQTFEGENQS---SVPSV  309 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y-~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~---~~~~~  309 (348)
                            .+.+.|+|+|++|+|++++.+++++...+.| +++++.+|+.|++++|.+.+|...+|........   .....
T Consensus       239 ------~~~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~~~~~~~~~~~  312 (342)
T d1y1pa1         239 ------ALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTA  312 (342)
T ss_dssp             ------HTCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECCH
T ss_pred             ------CCccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCccCcccccccch
Confidence                  2235789999999999999999998877765 5567799999999999999987666654433222   11223


Q ss_pred             cChHHHHHcCCccccChhHHHHHHHHHH
Q 035965          310 ISSEKLKDLGFNYKHGIEDIICQTIASC  337 (348)
Q Consensus       310 ~~~~~~~~LG~~p~~~~~e~l~~~~~~~  337 (348)
                      .+.++++.|||.+.++++|+|++++++.
T Consensus       313 ~s~~~~k~lg~~~~~~lee~i~d~I~s~  340 (342)
T d1y1pa1         313 PSLEILKSLGRPGWRSIEESIKDLVGSE  340 (342)
T ss_dssp             HHHHHHHHTTCCSCCCHHHHHHHHHCCS
T ss_pred             HHHHHHHHcCCCCCcCHHHHHHHHHHhC
Confidence            3455666899999889999999998753

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=1.5e-42  Score=310.98  Aligned_cols=312  Identities=15%  Similarity=0.115  Sum_probs=227.8

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhcC--CCEEEEccc
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVMG--CDGVFHVAA   88 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~Vih~a~   88 (348)
                      ||||||||||||+||+++|+++||+|+++++-....  .........++++++.+|++|.+.+.+++++  +|+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            799999999999999999999999999998633222  1111112345899999999999999998874  699999999


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCC-------
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTP-------  161 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~-------  161 (348)
                      .........+     +. .++++|+.||.+|++++.+.+ ++++|+.||..+++.....    .+..+.....       
T Consensus        82 ~~~~~~~~~~-----~~-~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~----~~~~~~~~~~~~~~~~~  150 (338)
T d1orra_          82 QVAMTTSIDN-----PC-MDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQ----YKYNETETRYTCVDKPN  150 (338)
T ss_dssp             CCCHHHHHHC-----HH-HHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTT----SCEEECSSCEEETTCTT
T ss_pred             cccccccccC-----hH-HHHHHHHHHHHHHHHhhhccc-ccccccccccccccccccc----ccccccccccccccccc
Confidence            8766543334     43 889999999999999999998 7777777776666665441    1222111100       


Q ss_pred             cchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCC-chH----HHHHhhhcCCCCcccccc
Q 035965          162 IHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVP-SSI----QVLLSPITGDSKFFSILS  236 (348)
Q Consensus       162 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~  236 (348)
                      .........|.+.|+.+|...|.++..+.+.+++....+|++++||+....... ...    ..+.+...+....+.+.|
T Consensus       151 ~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  230 (338)
T d1orra_         151 GYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISG  230 (338)
T ss_dssp             CBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEES
T ss_pred             CcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeC
Confidence            001111123678999999999999999999999999999999999876554322 222    222233334444444444


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEEe---ccCcChHHHHHHHHHhCCCCCCCcccCCCCC--CCccc
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYICC---VKSCPISEFIDHLKLEYPSSKMQTFEGENQS--SVPSV  309 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~~---~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~--~~~~~  309 (348)
                      .   |.+.|||+|++|++++++.++++..  .++.|++.   +..+++.|+++.+.+..+. ..+......++  ...+.
T Consensus       231 ~---g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~  306 (338)
T d1orra_         231 N---GKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI-DMRFTNLPVRESDQRVFV  306 (338)
T ss_dssp             S---SCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTC-CCCEEEECCCSSCCSEEC
T ss_pred             C---CceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCC-CceeEeCCCCCCCcCeee
Confidence            4   4489999999999999999998753  35677652   3488999999999999875 33333322222  44566


Q ss_pred             cChHHHH-HcCCccccChhHHHHHHHHHHHH
Q 035965          310 ISSEKLK-DLGFNYKHGIEDIICQTIASCVD  339 (348)
Q Consensus       310 ~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~  339 (348)
                      .|++|++ .|||+|+++++|+|+++++|++.
T Consensus       307 ~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         307 ADIKKITNAIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             BCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             ECHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence            7999999 89999999999999999999985

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=2.3e-41  Score=305.61  Aligned_cols=304  Identities=16%  Similarity=0.157  Sum_probs=227.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~   86 (348)
                      +.|||||||||||||++|+++|+++|++|++++|+..+. .........+.++++.+|++|++.+.++++  .+|+|+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            468999999999999999999999999999999987654 333222334579999999999999988876  57999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      |+......+...     +. .+..+|+.++.++++++++.+....+++.||...++....    ..+.+|+++..     
T Consensus        87 aa~~~~~~~~~~-----~~-~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~----~~~~~~~~~~~-----  151 (356)
T d1rkxa_          87 AAQPLVRLSYSE-----PV-ETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW----IWGYRENEAMG-----  151 (356)
T ss_dssp             CSCCCHHHHHHC-----HH-HHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS----SSCBCTTSCBC-----
T ss_pred             hccccccccccC-----Cc-cccccccccchhhhhhhhcccccccccccccccccccccc----ccccccccccC-----
Confidence            998766554444     54 7899999999999999999874556666666554433333    34666666543     


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHh---------CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccc
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANE---------NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSS  237 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---------~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (348)
                          |.++|+.+|..+|..+..++++         +++.++++||+++|||++... ..++..+.+...+....+.  + 
T Consensus       152 ----p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~-~~~i~~~~~~~~~~~~~~~--~-  223 (356)
T d1rkxa_         152 ----GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVII--R-  223 (356)
T ss_dssp             ----CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEEC--S-
T ss_pred             ----CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchh-hHHHHHHHHHHhCCCceEE--e-
Confidence                7789999999999998887653         468899999999999986542 3455555555555443322  2 


Q ss_pred             cccCCCCcceeeHHHHHHHHHHhhcCCCCCc-----eEEE---eccCcChHHHHHHHHHhCCCCCCCcc-cCCCCC--CC
Q 035965          238 VSNRMGSIALVHIEDICNAHIFLMENDRAQG-----QYIC---CVKSCPISEFIDHLKLEYPSSKMQTF-EGENQS--SV  306 (348)
Q Consensus       238 ~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~-----~y~~---~~~~~s~~el~~~i~~~~~~~~~~~~-~~~~~~--~~  306 (348)
                        .+.+.|+|+|++|+++++..++.++...+     ..+.   .....++.++++.+.+..+. ..+.. ....++  ..
T Consensus       224 --~~~~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~  300 (356)
T d1rkxa_         224 --NPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGE-GASWQLDGNAHPHEAH  300 (356)
T ss_dssp             --CTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCT-TCCEEC-------CCC
T ss_pred             --eccccccccccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCC-CccEEEcCCCCCCCcC
Confidence              33378999999999999999888754322     2222   24488999999999999976 22222 222222  44


Q ss_pred             ccccChHHHH-HcCCccccChhHHHHHHHHHHHH
Q 035965          307 PSVISSEKLK-DLGFNYKHGIEDIICQTIASCVD  339 (348)
Q Consensus       307 ~~~~~~~~~~-~LG~~p~~~~~e~l~~~~~~~~~  339 (348)
                      ....|++|++ +|||+|+++++++|+++++||++
T Consensus       301 ~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~  334 (356)
T d1rkxa_         301 YLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN  334 (356)
T ss_dssp             CCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred             eeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            5678999999 89999999999999999999986

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=6.3e-38  Score=273.55  Aligned_cols=268  Identities=16%  Similarity=0.081  Sum_probs=207.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAAS   89 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~~   89 (348)
                      |||||||||||||++|+++|.++||+|++++|+.                   +|+.|.+++.++++  ++|+|||+|+.
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-------------------~D~~d~~~~~~~l~~~~~d~vih~a~~   62 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-------------------LDITNVLAVNKFFNEKKPNVVINCAAH   62 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-------------------CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-------------------ccCCCHHHHHHHHHHcCCCEEEeeccc
Confidence            5799999999999999999999999999999854                   58899999988886  68999999998


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      .....+...     +. .....|+..+..+.+.+...+  ..++++||..+++....     .+.+|.++..        
T Consensus        63 ~~~~~~~~~-----~~-~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~v~~~~~~-----~~~~e~~~~~--------  121 (281)
T d1vl0a_          63 TAVDKCEEQ-----YD-LAYKINAIGPKNLAAAAYSVG--AEIVQISTDYVFDGEAK-----EPITEFDEVN--------  121 (281)
T ss_dssp             CCHHHHHHC-----HH-HHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSCSCCS-----SCBCTTSCCC--------
T ss_pred             ccccccccc-----ch-hhccccccccccccccccccc--ccccccccceeeecccc-----cccccccccc--------
Confidence            765543333     43 678889999999999888776  67888888776554433     5788887654        


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVH  249 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~  249 (348)
                       |.+.|+.+|..+|.+++.+    +.+.+++||++|||++.+.    ....+.....+....+.       +++.|+++|
T Consensus       122 -~~~~~~~~k~~~e~~~~~~----~~~~~i~R~~~vyG~~~~~----~~~~~~~~~~~~~~~~~-------~~~~~~~i~  185 (281)
T d1vl0a_         122 -PQSAYGKTKLEGENFVKAL----NPKYYIVRTAWLYGDGNNF----VKTMINLGKTHDELKVV-------HDQVGTPTS  185 (281)
T ss_dssp             -CCSHHHHHHHHHHHHHHHH----CSSEEEEEECSEESSSSCH----HHHHHHHHHHCSEEEEE-------SSCEECCEE
T ss_pred             -chhhhhhhhhHHHHHHHHh----CCCccccceeEEeCCCccc----ccchhhhhccCCceeec-------CCceeccch
Confidence             7788999999999987663    7899999999999997542    22223333334332221       236889999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEE-eccCcChHHHHHHHHHhCCCCCCCcc---cCCCCC----CCccccChHHHH-HcCC
Q 035965          250 IEDICNAHIFLMENDRAQGQYIC-CVKSCPISEFIDHLKLEYPSSKMQTF---EGENQS----SVPSVISSEKLK-DLGF  320 (348)
Q Consensus       250 v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~el~~~i~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~-~LG~  320 (348)
                      ++|+++++..++++.. .|.||+ +++.+|+.|+++.+++.+|. +.++.   ..+.+.    +.+..+|++|++ .|||
T Consensus       186 v~D~~~~~~~~~~~~~-~g~~~~~~~~~~s~~e~~~~i~~~~g~-~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~  263 (281)
T d1vl0a_         186 TVDLARVVLKVIDEKN-YGTFHCTCKGICSWYDFAVEIFRLTGI-DVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGD  263 (281)
T ss_dssp             HHHHHHHHHHHHHHTC-CEEEECCCBSCEEHHHHHHHHHHHHCC-CCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCC
T ss_pred             hhhhhhhhhhhhhhcc-cCceeEeCCCccchHHHHHHHHHHhCC-CceEEeccHHHcCCcCCCccccccCHHHHHHHhCC
Confidence            9999999999998875 467765 56799999999999999986 22221   111110    234458999999 7999


Q ss_pred             ccccChhHHHHHHHHHHH
Q 035965          321 NYKHGIEDIICQTIASCV  338 (348)
Q Consensus       321 ~p~~~~~e~l~~~~~~~~  338 (348)
                      +|+ +|+|+|++++++++
T Consensus       264 ~~~-~~~~~l~~~l~~l~  280 (281)
T d1vl0a_         264 ITR-EWKESLKEYIDLLQ  280 (281)
T ss_dssp             CCC-BHHHHHHHHHHHHT
T ss_pred             CCC-CHHHHHHHHHHHhc
Confidence            999 99999999999985

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.2e-38  Score=275.63  Aligned_cols=290  Identities=17%  Similarity=0.150  Sum_probs=190.4

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHH-H-----hhcCCCEEEEc
Q 035965           14 FCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFD-K-----AVMGCDGVFHV   86 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~-~-----~~~~~d~Vih~   86 (348)
                      |||||||||||++|+++|+++|+ +|+++++-..........      +....|..+.+.+. .     .+..+++|+|+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   75 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV------DLNIADYMDKEDFLIQIMAGEEFGDVEAIFHE   75 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH------TSCCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc------ccchhhhccchHHHHHHhhhhcccchhhhhhh
Confidence            89999999999999999999996 788987543322111111      11112222222221 1     22367999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      |+......  .      +...+...|+.++.+++++++..+ + ++|+.||..++++...     ....|+.+.      
T Consensus        76 aa~~~~~~--~------~~~~~~~~~~~~~~~~l~~~~~~~-i-~~v~~ss~~~~~~~~~-----~~~~~~~~~------  134 (307)
T d1eq2a_          76 GACSSTTE--W------DGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTS-----DFIESREYE------  134 (307)
T ss_dssp             CSCCCTTC--C------CHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCS-----CBCSSGGGC------
T ss_pred             cccccccc--c------cccccccccccccccccccccccc-c-cccccccccccccccc-----ccccccccc------
Confidence            98655443  1      223678888999999999999888 5 5777777776655433     233333332      


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCC--CCchHHHHHhhhcCCCCccccccccccCCCC
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSS--VPSSIQVLLSPITGDSKFFSILSSVSNRMGS  244 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (348)
                         .|.+.|+.+|..+|.+++.++++++++++++||+++|||+....  .......+.+.+..........|.   +.+.
T Consensus       135 ---~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~  208 (307)
T d1eq2a_         135 ---KPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGS---ENFK  208 (307)
T ss_dssp             ---CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC----------------C
T ss_pred             ---ccccccccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCc---ccee
Confidence               26788999999999999999999999999999999999976543  222333344444333322222333   3378


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCceEEE-eccCcChHHHHHHHHHhCCCCCCCccc--CCC--CCCCccccChHHHH-Hc
Q 035965          245 IALVHIEDICNAHIFLMENDRAQGQYIC-CVKSCPISEFIDHLKLEYPSSKMQTFE--GEN--QSSVPSVISSEKLK-DL  318 (348)
Q Consensus       245 r~~i~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~s~~el~~~i~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~-~L  318 (348)
                      |+|+|++|+++++..+++++. .+.|++ +++..|+.|+++++.+..+...++...  ...  ........|++|++ .+
T Consensus       209 r~~~~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~  287 (307)
T d1eq2a_         209 RDFVYVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAG  287 (307)
T ss_dssp             BCEEEHHHHHHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHHTT
T ss_pred             eeeeecccHHHHHHHHhhhcc-ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHHHH
Confidence            999999999999999998764 567766 577999999999998877643332111  111  11334556899999 78


Q ss_pred             CCccccChhHHHHHHHHHH
Q 035965          319 GFNYKHGIEDIICQTIASC  337 (348)
Q Consensus       319 G~~p~~~~~e~l~~~~~~~  337 (348)
                      ||+|.++++|+|+++++|+
T Consensus       288 ~~~p~~sl~egi~~~i~w~  306 (307)
T d1eq2a_         288 YDKPFKTVAEGVTEYMAWL  306 (307)
T ss_dssp             CCCCCCCHHHHHHHHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHhC
Confidence            9999999999999999995

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=100.00  E-value=7.5e-35  Score=255.81  Aligned_cols=276  Identities=14%  Similarity=0.050  Sum_probs=199.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEcccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHVAAS   89 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~a~~   89 (348)
                      |||||||||||||++|+++|.++|+. ++++++...               +.+|++|.+.+.++++  ++|+|||+||.
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~~---------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNL-IALDVHSKE---------------FCGDFSNPKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCSS---------------SCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCcc---------------ccCcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence            67999999999999999999988864 455544321               3489999999998886  57999999998


Q ss_pred             CccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccC
Q 035965           90 MEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKK  169 (348)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  169 (348)
                      .....+...     +. ..++.|+.++.++++++++.+  .+++++||+.+++....     .+.+|..+..        
T Consensus        65 ~~~~~~~~~-----~~-~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~~~~~~-----~~~~E~~~~~--------  123 (298)
T d1n2sa_          65 TAVDKAESE-----PE-LAQLLNATSVEAIAKAANETG--AWVVHYSTDYVFPGTGD-----IPWQETDATS--------  123 (298)
T ss_dssp             CCHHHHTTC-----HH-HHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGSCCCTT-----CCBCTTSCCC--------
T ss_pred             ccccccccC-----cc-ccccccccccccchhhhhccc--cccccccccccccCCCC-----CCCccccccC--------
Confidence            766554455     54 788999999999999999887  67899999886654433     5888888655        


Q ss_pred             CCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceee
Q 035965          170 ASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVH  249 (348)
Q Consensus       170 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~  249 (348)
                       |.+.|+.+|..+|..+..+.    ....++|++..|+.....    ....+.+.+.+......      .+.+.++++|
T Consensus       124 -p~~~y~~~k~~~e~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~------~~~~~~~~~~  188 (298)
T d1n2sa_         124 -PLNVYGKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGNN----FAKTMLRLAKERQTLSV------INDQYGAPTG  188 (298)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSCC----HHHHHHHHHHHCSEEEE------ECSCEECCEE
T ss_pred             -CCchHhhhhhhhhhhHHhhh----cccccccccceeeccCCc----cchhhhhhhcccceeec------ccceeecccc
Confidence             77899999999999887753    345666666666543222    22233344433332222      2235678999


Q ss_pred             HHHHHHHHHHhhc----CCCCCceEEEec-cCcChHHHHHHHHHhCCCCC--CCc------ccCCCCC----CCccccCh
Q 035965          250 IEDICNAHIFLME----NDRAQGQYICCV-KSCPISEFIDHLKLEYPSSK--MQT------FEGENQS----SVPSVISS  312 (348)
Q Consensus       250 v~D~a~~~~~~~~----~~~~~~~y~~~~-~~~s~~el~~~i~~~~~~~~--~~~------~~~~~~~----~~~~~~~~  312 (348)
                      +.|+++++..+++    .+...++||+++ +.++..|+++.+.+..+...  .+.      .......    +.+..+|+
T Consensus       189 ~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~  268 (298)
T d1n2sa_         189 AELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNT  268 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCC
T ss_pred             cchHHHHHHHHHhhhhccccccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCH
Confidence            9999999888765    344577898765 69999999999887653211  111      0011100    23456899


Q ss_pred             HHHH-HcCCccccChhHHHHHHHHHHHHc
Q 035965          313 EKLK-DLGFNYKHGIEDIICQTIASCVDC  340 (348)
Q Consensus       313 ~~~~-~LG~~p~~~~~e~l~~~~~~~~~~  340 (348)
                      +|++ .|||+|+ +|+|+|+++++++.+.
T Consensus       269 ~K~~~~~~~~~~-~~~~gl~~~i~~~~~~  296 (298)
T d1n2sa_         269 EKFQRNFDLILP-QWELGVKRMLTEMFTT  296 (298)
T ss_dssp             HHHHHHHTCCCC-BHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHCCCCC-cHHHHHHHHHHHHHhh
Confidence            9999 7999999 9999999999999765

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.6e-31  Score=222.25  Aligned_cols=209  Identities=18%  Similarity=0.104  Sum_probs=158.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      |++|+|||||||||||++|+++|+++|+  +|++++|++.+.....    ...++...+|+.+.+++..+++++|+|||+
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~----~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~   87 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----YKNVNQEVVDFEKLDDYASAFQGHDVGFCC   87 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----GGGCEEEECCGGGGGGGGGGGSSCSEEEEC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc----cceeeeeeeccccccccccccccccccccc
Confidence            4568999999999999999999999994  8999999875442111    236888899999999999999999999999


Q ss_pred             cccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhh
Q 035965           87 AASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVW  166 (348)
Q Consensus        87 a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  166 (348)
                      ++......         ....+.++|+.++.+++++|.+.+ +++|||+||..++.   .                    
T Consensus        88 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~---~--------------------  134 (232)
T d2bkaa1          88 LGTTRGKA---------GAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADK---S--------------------  134 (232)
T ss_dssp             CCCCHHHH---------HHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT---T--------------------
T ss_pred             cccccccc---------chhhhhhhcccccceeeecccccC-ccccccCCcccccc---C--------------------
Confidence            98654333         334788999999999999999999 99999999987421   1                    


Q ss_pred             ccCCCcchhHhhHHHHHHHHHHHHHhCCCc-EEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          167 NKKASGWVYVLSKLLSEETAFKFANENKID-LVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       167 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~-~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                          +.+.|+.+|..+|..+..    .+++ ++++||+.+||++....   ....+.......   ++  +.    ....
T Consensus       135 ----~~~~Y~~~K~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~~~---~~~~~~~~~~~~---~~--~~----~~~~  194 (232)
T d2bkaa1         135 ----SNFLYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESR---PGEWLVRKFFGS---LP--DS----WASG  194 (232)
T ss_dssp             ----CSSHHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGS---HHHHHHHHHHCS---CC--TT----GGGG
T ss_pred             ----ccchhHHHHHHhhhcccc----ccccceEEecCceeecCCCcCc---HHHHHHHHHhhc---cC--Cc----ccCC
Confidence                335799999999998866    3554 89999999999975532   221122221111   11  11    1123


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEec
Q 035965          246 ALVHIEDICNAHIFLMENDRAQGQYICCV  274 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~~~~y~~~~  274 (348)
                      ..||++|+|++++.++.++..++.+++++
T Consensus       195 ~~I~~~dvA~a~i~~~~~~~~~~~~i~~~  223 (232)
T d2bkaa1         195 HSVPVVTVVRAMLNNVVRPRDKQMELLEN  223 (232)
T ss_dssp             TEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred             CeEEHHHHHHHHHHHHhcCccCCeEEEcH
Confidence            37999999999999999888888877654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.9e-29  Score=208.04  Aligned_cols=201  Identities=16%  Similarity=0.164  Sum_probs=153.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |.||||+|||||||||++++++|+++||+|++++|++.+....    ...+++++.+|++|.+++.++++++|+|||+++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g   76 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE----GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG   76 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS----SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc----cccccccccccccchhhHHHHhcCCCEEEEEec
Confidence            4578999999999999999999999999999999987764111    124789999999999999999999999999998


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      .....             .....+..++.++++++++.+ ++|||++||..+++.....     +               
T Consensus        77 ~~~~~-------------~~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~~-----~---------------  122 (205)
T d1hdoa_          77 TRNDL-------------SPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKV-----P---------------  122 (205)
T ss_dssp             CTTCC-------------SCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCS-----C---------------
T ss_pred             cCCch-------------hhhhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCccc-----c---------------
Confidence            64321             233566789999999999999 9999999998755432220     0               


Q ss_pred             CCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCccee
Q 035965          169 KASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       169 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                       .....|...|..+|++++.    .+++++++||+.+++......                ..+..     .+.....+|
T Consensus       123 -~~~~~~~~~~~~~e~~l~~----~~~~~tiirp~~~~~~~~~~~----------------~~~~~-----~~~~~~~~i  176 (205)
T d1hdoa_         123 -PRLQAVTDDHIRMHKVLRE----SGLKYVAVMPPHIGDQPLTGA----------------YTVTL-----DGRGPSRVI  176 (205)
T ss_dssp             -GGGHHHHHHHHHHHHHHHH----TCSEEEEECCSEEECCCCCSC----------------CEEES-----SSCSSCSEE
T ss_pred             -ccccccchHHHHHHHHHHh----cCCceEEEecceecCCCCccc----------------EEEee-----CCCCCCCcC
Confidence             1234688899999987754    689999999999987543321                01111     112345599


Q ss_pred             eHHHHHHHHHHhhcCCCCCc-eEEEe
Q 035965          249 HIEDICNAHIFLMENDRAQG-QYICC  273 (348)
Q Consensus       249 ~v~D~a~~~~~~~~~~~~~~-~y~~~  273 (348)
                      +++|+|++++.+++++...| .+.++
T Consensus       177 ~~~DvA~~~~~~l~~~~~~g~~~~~s  202 (205)
T d1hdoa_         177 SKHDLGHFMLRCLTTDEYDGHSTYPS  202 (205)
T ss_dssp             EHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred             CHHHHHHHHHHHhCCCCCCCEEEecC
Confidence            99999999999999887544 44443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.96  E-value=2.4e-29  Score=221.72  Aligned_cols=233  Identities=16%  Similarity=0.112  Sum_probs=163.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccc---cc-cCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIF---SK-WTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      +++||||||||||||++|+++|+++||+|++++|+.......   .. .....+++++.+|+.|.+.+.+++++++.++|
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence            467899999999999999999999999999999976533111   00 01235799999999999999999999999999


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchh
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHV  165 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~  165 (348)
                      +++....                 ..|..++.+++++|.+.+ ..++++.||.++....           +..+.     
T Consensus        82 ~~~~~~~-----------------~~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g~~~~~-----------~~~~~-----  127 (312)
T d1qyda_          82 ALAGGVL-----------------SHHILEQLKLVEAIKEAG-NIKRFLPSEFGMDPDI-----------MEHAL-----  127 (312)
T ss_dssp             CCCCSSS-----------------STTTTTHHHHHHHHHHSC-CCSEEECSCCSSCTTS-----------CCCCC-----
T ss_pred             hhhhccc-----------------ccchhhhhHHHHHHHHhc-CCcEEEEeeccccCCC-----------ccccc-----
Confidence            9875322                 223445678888888887 6778888875432111           11111     


Q ss_pred             hccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCc
Q 035965          166 WNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSI  245 (348)
Q Consensus       166 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  245 (348)
                          .+...|..+|..++.    +.+..+++++++||+.+||+.........    ....... ..+...+   .+++.+
T Consensus       128 ----~~~~~~~~~~~~~~~----~~~~~~~~~~i~r~~~~~g~~~~~~~~~~----~~~~~~~-~~~~~~~---~g~~~~  191 (312)
T d1qyda_         128 ----QPGSITFIDKRKVRR----AIEAASIPYTYVSSNMFAGYFAGSLAQLD----GHMMPPR-DKVLIYG---DGNVKG  191 (312)
T ss_dssp             ----SSTTHHHHHHHHHHH----HHHHTTCCBCEEECCEEHHHHTTTSSCTT----CCSSCCS-SEECCBT---TSCSEE
T ss_pred             ----chhhhhhHHHHHHHH----hhcccccceEEeccceeecCCccchhhHH----HHhhhcc-ccccccc---cccccc
Confidence                133456666665555    45557899999999999997654321111    1111111 1222233   345889


Q ss_pred             ceeeHHHHHHHHHHhhcCCCC-Cce-EEEe-ccCcChHHHHHHHHHhCCC
Q 035965          246 ALVHIEDICNAHIFLMENDRA-QGQ-YICC-VKSCPISEFIDHLKLEYPS  292 (348)
Q Consensus       246 ~~i~v~D~a~~~~~~~~~~~~-~~~-y~~~-~~~~s~~el~~~i~~~~~~  292 (348)
                      +|||++|+|++++.+++++.. ++. |+++ ++.+|+.|+++.+.+.+|.
T Consensus       192 ~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~  241 (312)
T d1qyda_         192 IWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ  241 (312)
T ss_dssp             EEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             ceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCC
Confidence            999999999999999998765 444 5554 4589999999999999875

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.95  E-value=3.9e-28  Score=212.96  Aligned_cols=227  Identities=19%  Similarity=0.224  Sum_probs=160.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc---c-CCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK---W-TRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~---~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      ++|||||||||||||++|+++|+++||+|++++|+.... .....   . ....+++++.+|+.+...+.+.+++++.|+
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            368999999999999999999999999999999976543 11100   0 013468999999999999999999999999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcch
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHH  164 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~  164 (348)
                      |+++....                     .++.++++++.+.+ ..++++.||... ..           ++....    
T Consensus        82 ~~~~~~~~---------------------~~~~~~~~a~~~~~-~~~~~~~s~~~~-~~-----------~~~~~~----  123 (307)
T d1qyca_          82 STVGSLQI---------------------ESQVNIIKAIKEVG-TVKRFFPSEFGN-DV-----------DNVHAV----  123 (307)
T ss_dssp             ECCCGGGS---------------------GGGHHHHHHHHHHC-CCSEEECSCCSS-CT-----------TSCCCC----
T ss_pred             eccccccc---------------------chhhHHHHHHHHhc-cccceeeecccc-cc-----------cccccc----
Confidence            99874322                     22446778888877 788888888542 11           111111    


Q ss_pred             hhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCC
Q 035965          165 VWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGS  244 (348)
Q Consensus       165 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (348)
                           .+...+...+...+.++.    +.+++++++||+++||+.......    .+.....+..  +...+   .+++.
T Consensus       124 -----~~~~~~~~~~~~~~~~~~----~~~~~~~i~r~~~v~g~~~~~~~~----~~~~~~~~~~--~~~~~---~~~~~  185 (307)
T d1qyca_         124 -----EPAKSVFEVKAKVRRAIE----AEGIPYTYVSSNCFAGYFLRSLAQ----AGLTAPPRDK--VVILG---DGNAR  185 (307)
T ss_dssp             -----TTHHHHHHHHHHHHHHHH----HHTCCBEEEECCEEHHHHTTTTTC----TTCSSCCSSE--EEEET---TSCCE
T ss_pred             -----ccccccccccccccchhh----ccCCCceecccceecCCCccchhh----hhhhhhhccc--ceeee---ccccc
Confidence                 122345555655555544    458999999999999986543211    1112222222  22122   34588


Q ss_pred             cceeeHHHHHHHHHHhhcCCCC-Cce-EEEe-ccCcChHHHHHHHHHhCCC
Q 035965          245 IALVHIEDICNAHIFLMENDRA-QGQ-YICC-VKSCPISEFIDHLKLEYPS  292 (348)
Q Consensus       245 r~~i~v~D~a~~~~~~~~~~~~-~~~-y~~~-~~~~s~~el~~~i~~~~~~  292 (348)
                      ++|+|++|+|++++.+++++.. ++. |+++ ++.+|+.|+++.+.+.+|.
T Consensus       186 ~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~  236 (307)
T d1qyca_         186 VVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK  236 (307)
T ss_dssp             EEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred             ccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCC
Confidence            9999999999999999998765 343 5654 5799999999999999986

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=2.5e-27  Score=201.41  Aligned_cols=236  Identities=15%  Similarity=0.089  Sum_probs=160.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCe--EEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYI--VHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      .|++|||||||||||++|+++|+++|++  |++++|++++...     ...+++++.+|+.+.+++.++++++|+|||+|
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a   76 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-----IGGEADVFIGDITDADSINPAFQGIDALVILT   76 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-----TTCCTTEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-----ccCCcEEEEeeeccccccccccccceeeEEEE
Confidence            3789999999999999999999999975  5666776654311     12478899999999999999999999999999


Q ss_pred             ccCcccccccc-------ccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCC
Q 035965           88 ASMEFDINVKD-------NIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQT  160 (348)
Q Consensus        88 ~~~~~~~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~  160 (348)
                      +..........       ............+|+.++.++++.+.... .+++.+.|+....... .      +...    
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~-~------~~~~----  144 (252)
T d2q46a1          77 SAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPD-H------PLNK----  144 (252)
T ss_dssp             CCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTT-C------GGGG----
T ss_pred             eeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccccccCCCC-c------cccc----
Confidence            86543221110       00000113566788999999999998887 7888888876532111 1      0000    


Q ss_pred             CcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccccccc
Q 035965          161 PIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSN  240 (348)
Q Consensus       161 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (348)
                               .+...|...+.+.    ..+..+.+++++++||+++||+.....         ..+.+...... .     
T Consensus       145 ---------~~~~~~~~~~~~~----~~~~~~~~~~~~ilRp~~v~g~~~~~~---------~~~~~~~~~~~-~-----  196 (252)
T d2q46a1         145 ---------LGNGNILVWKRKA----EQYLADSGTPYTIIRAGGLLDKEGGVR---------ELLVGKDDELL-Q-----  196 (252)
T ss_dssp             ---------GGGCCHHHHHHHH----HHHHHHSSSCEEEEEECEEECSCTTSS---------CEEEESTTGGG-G-----
T ss_pred             ---------ccccchhhhhhhh----hhhhhcccccceeecceEEECCCcchh---------hhhhccCcccc-c-----
Confidence                     0122344444443    444556799999999999999975431         11111111111 1     


Q ss_pred             CCCCcceeeHHHHHHHHHHhhcCCCCC-ceEEEecc----CcChHHHHHHHHHhCCC
Q 035965          241 RMGSIALVHIEDICNAHIFLMENDRAQ-GQYICCVK----SCPISEFIDHLKLEYPS  292 (348)
Q Consensus       241 ~~~~r~~i~v~D~a~~~~~~~~~~~~~-~~y~~~~~----~~s~~el~~~i~~~~~~  292 (348)
                        ..+++||++|+|++++.+++++... +.|+++++    ..++.|+.+++.+..++
T Consensus       197 --~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~r  251 (252)
T d2q46a1         197 --TDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  251 (252)
T ss_dssp             --SSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCCC
T ss_pred             --CCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHhc
Confidence              3345999999999999999988764 47877532    56788888888776543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=2.6e-27  Score=197.26  Aligned_cols=196  Identities=14%  Similarity=0.098  Sum_probs=137.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhh-cCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAV-MGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~Vih~a   87 (348)
                      +|||||||||||||++|+++|+++|+  +|++++|++...        .+.+   ..+..|..++...+ ..+|+|||++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~--------~~~~---~~~~~d~~~~~~~~~~~~d~vi~~~   70 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE--------HPRL---DNPVGPLAELLPQLDGSIDTAFCCL   70 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC--------CTTE---ECCBSCHHHHGGGCCSCCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh--------cccc---cccccchhhhhhccccchheeeeee
Confidence            58999999999999999999999998  677777755321        1233   33444444444433 3589999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWN  167 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  167 (348)
                      |......  ..     . ..+.+.|+.++.+++++|++.+ +++++|+||..++.   .                     
T Consensus        71 g~~~~~~--~~-----~-~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~---~---------------------  117 (212)
T d2a35a1          71 GTTIKEA--GS-----E-EAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADA---K---------------------  117 (212)
T ss_dssp             CCCHHHH--SS-----H-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT---T---------------------
T ss_pred             eeecccc--cc-----c-cccccchhhhhhhccccccccc-cccccccccccccc---c---------------------
Confidence            8653332  11     2 4788999999999999999988 99999999976432   1                     


Q ss_pred             cCCCcchhHhhHHHHHHHHHHHHHhCCC-cEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcc
Q 035965          168 KKASGWVYVLSKLLSEETAFKFANENKI-DLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIA  246 (348)
Q Consensus       168 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~-~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  246 (348)
                         +.+.|+.+|..+|..++.    .++ +++++||+.|||+.......       ..+......+ ..+.++       
T Consensus       118 ---~~~~y~~~K~~~E~~l~~----~~~~~~~I~Rp~~v~G~~~~~~~~-------~~~~~~~~~~-~~~~~~-------  175 (212)
T d2a35a1         118 ---SSIFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFRLA-------EILAAPIARI-LPGKYH-------  175 (212)
T ss_dssp             ---CSSHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEEGG-------GGTTCCCC-----CHHH-------
T ss_pred             ---cccchhHHHHHHhhhccc----cccccceeeCCcceeCCcccccHH-------HHHHHHHhhc-cCCCCc-------
Confidence               335799999999998764    355 59999999999997653211       1111111111 123334       


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEE
Q 035965          247 LVHIEDICNAHIFLMENDRAQGQYIC  272 (348)
Q Consensus       247 ~i~v~D~a~~~~~~~~~~~~~~~y~~  272 (348)
                      .||++|+|++++.+++++..+..|+.
T Consensus       176 ~i~v~DvA~ai~~~~~~~~~g~~~~~  201 (212)
T d2a35a1         176 GIEACDLARALWRLALEEGKGVRFVE  201 (212)
T ss_dssp             HHHHHHHHHHHHHHHTCCCSEEEEEE
T ss_pred             EEEHHHHHHHHHHHHcCCCCCCEEEE
Confidence            79999999999999998765444443

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.91  E-value=1.3e-23  Score=188.13  Aligned_cols=230  Identities=14%  Similarity=0.089  Sum_probs=161.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcch-HHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGS-FDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~d~Vih~a~   88 (348)
                      ++|+|+|||||||||++|+++|+++||+|++++|++.+.....+ ...++++++.+|+.|..+ +..++.++|.++++..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~-~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~   80 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL-QAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT   80 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHH-HTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhh-cccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence            46899999999999999999999999999999998765411111 122479999999998654 6678889999987754


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhcc
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNK  168 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  168 (348)
                      ..                  ...|+..+.+++++|.+.+ +.++++.||.........                      
T Consensus        81 ~~------------------~~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~~~----------------------  119 (350)
T d1xgka_          81 SQ------------------AGDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLYGP----------------------  119 (350)
T ss_dssp             ST------------------TSCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGTSS----------------------
T ss_pred             cc------------------cchhhhhhhHHHHHHHHhC-CCceEEEeeccccccCCc----------------------
Confidence            21                  1234667889999999999 888888888652221111                      


Q ss_pred             CCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCccee
Q 035965          169 KASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALV  248 (348)
Q Consensus       169 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i  248 (348)
                       .+...|..+|...|.++..    .+++++++|++.+++.......+..   ...........+.   ....++..+.++
T Consensus       120 -~~~~~~~~~k~~~~~~~~~----~~~~~~~vr~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~i  188 (350)
T d1xgka_         120 -WPAVPMWAPKFTVENYVRQ----LGLPSTFVYAGIYNNNFTSLPYPLF---QMELMPDGTFEWH---APFDPDIPLPWL  188 (350)
T ss_dssp             -CCCCTTTHHHHHHHHHHHT----SSSCEEEEEECEEGGGCBSSSCSSC---BEEECTTSCEEEE---ESSCTTSCEEEE
T ss_pred             -ccchhhhhhHHHHHHHHHh----hccCceeeeeceeeccccccccccc---cccccccccceee---ecccCCCcceEE
Confidence             0223577888888776554    5789999999999886433321110   0011111111111   111334667789


Q ss_pred             eH-HHHHHHHHHhhcCCC---CCceEEEeccCcChHHHHHHHHHhCCC
Q 035965          249 HI-EDICNAHIFLMENDR---AQGQYICCVKSCPISEFIDHLKLEYPS  292 (348)
Q Consensus       249 ~v-~D~a~~~~~~~~~~~---~~~~y~~~~~~~s~~el~~~i~~~~~~  292 (348)
                      ++ +|+++++..++..+.   .+..|+++++.+|+.|+++++.+.+|+
T Consensus       189 ~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~~~T~~eia~~l~~~~G~  236 (350)
T d1xgka_         189 DAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR  236 (350)
T ss_dssp             CHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred             EeHHHHHHHHHHHHhCChhhcCCeEEEEeCCcCCHHHHHHHHHHHHCC
Confidence            86 799999999887542   355788888899999999999999886

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=2.1e-22  Score=169.27  Aligned_cols=211  Identities=18%  Similarity=0.173  Sum_probs=151.9

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+.++|++|||||++.||.++++.|+++|++|++++|+..+.         .++..+.+|++|++++.++++       +
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   73 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP---------KGLFGVEVDVTDSDAVDRAFTAVEEHQGP   73 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC---------TTSEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh---------cCceEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            356789999999999999999999999999999999986532         356789999999998877664       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||+||........+.+.++|  +..+++|+.++..+++.+.    +.+ ..++|++||.....+.+          
T Consensus        74 iDiLVnnAG~~~~~~~~~~~~e~~--~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~----------  140 (237)
T d1uzma1          74 VEVLVSNAGLSADAFLMRMTEEKF--EKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIG----------  140 (237)
T ss_dssp             CSEEEEECSCCC-----CCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC---------------
T ss_pred             ceEEEeeecccccccHhhCCHHHH--HHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCCc----------
Confidence            899999999876665556666666  6899999999988877654    334 57999999987544322          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     ....|+.||.+.+.+.+.++.+   +||++..+.||.|..+......+    .......   ..+
T Consensus       141 ---------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~----~~~~~~~---~~~  198 (237)
T d1uzma1         141 ---------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE----RIQQGAL---QFI  198 (237)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH----HHHHHHG---GGC
T ss_pred             ---------------ccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCH----HHHHHHH---hcC
Confidence                           2347999999999999998877   57999999999986552211100    0111111   112


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                      + .++         +...+|+|+++.+++....  ..|+.+
T Consensus       199 p-l~R---------~~~pedvA~~v~fL~S~~s~~itG~~i  229 (237)
T d1uzma1         199 P-AKR---------VGTPAEVAGVVSFLASEDASYISGAVI  229 (237)
T ss_dssp             T-TCS---------CBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             C-CCC---------CcCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            2 334         5589999999999986533  355543

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=3e-22  Score=168.89  Aligned_cols=216  Identities=14%  Similarity=0.156  Sum_probs=159.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|+++||||++.||+++++.|+++|++|++++|++.+. ......  ..++.++.+|++|++++.++++       .
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL--ADAARYVHLDVTQPAQWKAAVDTAVTAFGG   80 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--hCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            35689999999999999999999999999999999987654 222211  2468889999999998877664       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      +|++||+||........+.+.++|  ...+++|+.++..+++.+...   +...+||++||.....+.+           
T Consensus        81 idilinnAG~~~~~~~~~~~~~~~--~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~-----------  147 (244)
T d1nffa_          81 LHVLVNNAGILNIGTIEDYALTEW--QRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV-----------  147 (244)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------
T ss_pred             CeEEEECCcccCCCchhhCCHHHH--hHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccc-----------
Confidence            899999999876665556666666  689999999999998866432   1257899999987543221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    ....|+.+|...+.+.+.++.+   +||++..+.||.|-.+....            ........+
T Consensus       148 --------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~------------~~~~~~~~p  201 (244)
T d1nffa_         148 --------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW------------VPEDIFQTA  201 (244)
T ss_dssp             --------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT------------SCTTCSCCS
T ss_pred             --------------cccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhh------------hhHHHHhcc
Confidence                          2347999999999999999877   47999999999887653221            111111122


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQ-YICCV  274 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~-y~~~~  274 (348)
                       .++         +...+|+|+++.+++...  ...|+ +.+.+
T Consensus       202 -l~R---------~~~p~diA~~v~fL~s~~s~~itG~~i~vDG  235 (244)
T d1nffa_         202 -LGR---------AAEPVEVSNLVVYLASDESSYSTGAEFVVDG  235 (244)
T ss_dssp             -SSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -ccC---------CCCHHHHHHHHHHHhChhhCCCcCCEEEECC
Confidence             233         568999999999998643  23554 45543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=9.2e-22  Score=165.99  Aligned_cols=219  Identities=17%  Similarity=0.139  Sum_probs=158.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|+++||||++.||.++++.|+++|++|++++|+..+. .....    -+.+++.+|++|++++.++++       +
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   77 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA----VGAHPVVMDVADPASVERGFAEALAHLGR   77 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----TTCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----cCCeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            35679999999999999999999999999999999987654 22221    257889999999998877664       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      +|++||+||........+.+.++|  ...+++|+.++..+.+++...   .....++++||.. ..+.+           
T Consensus        78 iDilVnnAG~~~~~~~~~~~~~~~--~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~-~~~~~-----------  143 (242)
T d1ulsa_          78 LDGVVHYAGITRDNFHWKMPLEDW--ELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNL-----------  143 (242)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCT-----------
T ss_pred             ceEEEECCcccccCchhhCcchhh--hccccccchhhhhhhhhccccccccccceeeeecccc-ccCCC-----------
Confidence            899999999876665556666666  689999999999999877642   2245677777754 21111           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                    ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+......+...   ......    ++
T Consensus       144 --------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~---~~~~~~----~p  202 (242)
T d1ulsa_         144 --------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVR---EKAIAA----TP  202 (242)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHH---HHHHHT----CT
T ss_pred             --------------CCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHH---HHHHhc----CC
Confidence                          3357999999999999998877   47999999999997765433211111   111111    12


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCC--CCCceEEEecc
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQYICCVK  275 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~y~~~~~  275 (348)
                       .++         +...+|+|+++.+++...  ...|..+..+.
T Consensus       203 -l~R---------~~~pedia~~v~fL~S~~s~~itG~~i~vDG  236 (242)
T d1ulsa_         203 -LGR---------AGKPLEVAYAALFLLSDESSFITGQVLFVDG  236 (242)
T ss_dssp             -TCS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CCC---------CCCHHHHHHHHHHHhchhhCCCCCcEEEECC
Confidence             334         448999999999998643  33565444333

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=8.6e-22  Score=166.47  Aligned_cols=219  Identities=19%  Similarity=0.172  Sum_probs=160.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGV   83 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~V   83 (348)
                      .+++|++|||||++.||+++++.|+++|++|++++|+..+. ...+   ..+++.++.+|++|.++++++++   ++|++
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDil   80 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVR---ECPGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HSTTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH---hcCCCeEEEEeCCCHHHHHHHHHHhCCceEE
Confidence            46789999999999999999999999999999999987654 2222   22468899999999999988776   58999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ||+|+........+.+.++|  ...+++|+.++..+.+++..    .+...++|++||.....+.+              
T Consensus        81 VnnAg~~~~~~~~~~~~~~~--~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~--------------  144 (244)
T d1pr9a_          81 VNNAAVALLQPFLEVTKEAF--DRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT--------------  144 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------------
T ss_pred             EeccccccccchhhhhHHHH--HHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc--------------
Confidence            99999876665555566666  68899999999988887653    12357899999987533221              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                 ....|+.+|.+.+.+.+.++.+   ++|++..+.||.|..+......... ....... .   .++ .+
T Consensus       145 -----------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~-~~~~~~~-~---~~p-l~  207 (244)
T d1pr9a_         145 -----------NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDP-HKAKTML-N---RIP-LG  207 (244)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSH-HHHHHHH-T---TCT-TC
T ss_pred             -----------chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccCh-HHHHHHH-h---cCC-CC
Confidence                       2347999999999999999876   4799999999998765322111111 1111111 1   122 33


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                      +         +...+|+|+++.+++....  ..|+.+
T Consensus       208 R---------~~~peevA~~v~fL~S~~a~~itG~~i  235 (244)
T d1pr9a_         208 K---------FAEVEHVVNAILFLLSDRSGMTTGSTL  235 (244)
T ss_dssp             S---------CBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             C---------CcCHHHHHHHHHHHhCchhCCcCCcEE
Confidence            4         5589999999999886533  355543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.88  E-value=6.1e-22  Score=168.10  Aligned_cols=219  Identities=16%  Similarity=0.157  Sum_probs=159.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      ..+.|.+|||||++.||+++++.|+++|++|++++|+..+. .... +.....++.++.+|++|++++.++++       
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   86 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK   86 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            45689999999999999999999999999999999976544 2221 22233478899999999998877664       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      .+|++||+|+........+.+.++|  ...+++|+.++..+++++..    .+ ..+||++||.....+.+         
T Consensus        87 ~iDilvnnag~~~~~~~~~~~~~~~--~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~---------  154 (251)
T d2c07a1          87 NVDILVNNAGITRDNLFLRMKNDEW--EDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNV---------  154 (251)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHH--HHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT---------
T ss_pred             CceeeeeccccccccccccccHHHH--hhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCC---------
Confidence            6899999999876666555656666  68999999999988887653    33 57999999987543322         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      ....|+.||.+.+.+.+.++.+   +||++..+.||.|-.+......+    .....+...   
T Consensus       155 ----------------~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~----~~~~~~~~~---  211 (251)
T d2c07a1         155 ----------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE----QIKKNIISN---  211 (251)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH----HHHHHHHTT---
T ss_pred             ----------------CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCH----HHHHHHHhc---
Confidence                            2347999999999999999876   47999999999998765433211    122222111   


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                      ++ .++         +...+|+|+++.+++....  ..|..+
T Consensus       212 ~p-l~R---------~~~pedvA~~v~fL~S~~s~~itG~~i  243 (251)
T d2c07a1         212 IP-AGR---------MGTPEEVANLACFLSSDKSGYINGRVF  243 (251)
T ss_dssp             CT-TSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             CC-CCC---------CcCHHHHHHHHHHHhCchhCCCcCcEE
Confidence            22 344         4589999999999986543  356543

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.88  E-value=1.2e-21  Score=165.94  Aligned_cols=223  Identities=15%  Similarity=0.132  Sum_probs=155.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +++|+++||||++.||.++++.|+++|++|++++|++.+...........++.++.+|++|++++.++++       ++|
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            5678999999999999999999999999999999976543111112233578899999999998877654       689


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ++||+||........+.+.++|  ...+++|+.++..+++++..    .+ ..++|++||.....+.+            
T Consensus        83 ilVnnAG~~~~~~~~~~~~e~~--~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~------------  147 (247)
T d2ew8a1          83 ILVNNAGIYPLIPFDELTFEQW--KKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIE------------  147 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCS------------
T ss_pred             EEEECCCCCCCCChHhCCHHHh--hhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccCc------------
Confidence            9999999876655555666666  68999999999999987754    33 57899999987532221            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   ....|+.||.+.+.+.+.++.+   +||++..+.||.|-.+........   ........   ....
T Consensus       148 -------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~---~~~~~~~~---~~~~  208 (247)
T d2ew8a1         148 -------------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS---AMFDVLPN---MLQA  208 (247)
T ss_dssp             -------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------C---TTSS
T ss_pred             -------------ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc---hhHHHHHH---Hhcc
Confidence                         2347999999999999998876   479999999999876643321000   00011111   1111


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY-ICCV  274 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y-~~~~  274 (348)
                      .++         +...+|+|+++++++....  ..|.. .+.+
T Consensus       209 l~r---------~~~pedvA~~v~fL~S~~s~~itG~~i~vDG  242 (247)
T d2ew8a1         209 IPR---------LQVPLDLTGAAAFLASDDASFITGQTLAVDG  242 (247)
T ss_dssp             SCS---------CCCTHHHHHHHHHHTSGGGTTCCSCEEEESS
T ss_pred             CCC---------CCCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            223         4578999999999986433  35554 4433

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.88  E-value=1.8e-21  Score=166.97  Aligned_cols=229  Identities=17%  Similarity=0.197  Sum_probs=159.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      -+++|++|||||++.||.+++++|+++|++|++++|+..+. ...........+.++.+|++|++++.++++       .
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999987654 332222233568889999999998887764       6


Q ss_pred             CCEEEEccccCcccc--ccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           80 CDGVFHVAASMEFDI--NVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~--~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      +|++||+||......  ....+.++|  ...+++|+.++..+++++...   ....++|++||...+.....        
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~--~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~--------  152 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDF--KRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG--------  152 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT--------
T ss_pred             cceeccccccccCCCcccccCcHHHH--HHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccc--------
Confidence            899999999754432  223344455  578999999999998877532   22568999998765432211        


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+.....................  
T Consensus       153 ----------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--  214 (268)
T d2bgka1         153 ----------------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA--  214 (268)
T ss_dssp             ----------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC--
T ss_pred             ----------------cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcc--
Confidence                            2236999999999999998876   5799999999999887544321111111111111111  


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCC--CCCce-EEEec
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQ-YICCV  274 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~-y~~~~  274 (348)
                       ...++         +...+|+|+++++++...  ...|+ +.+.+
T Consensus       215 -~~~gr---------~~~pedvA~~v~fL~S~~s~~itGq~i~VDG  250 (268)
T d2bgka1         215 -NLKGT---------LLRAEDVADAVAYLAGDESKYVSGLNLVIDG  250 (268)
T ss_dssp             -SSCSC---------CCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -ccCCC---------CcCHHHHHHHHHHHhChhhCCccCceEEECc
Confidence             11233         558999999999998643  23555 44543

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.88  E-value=7.5e-22  Score=167.54  Aligned_cols=220  Identities=15%  Similarity=0.118  Sum_probs=158.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .++|++|||||++.||+++++.|+++|++|++++|+.++. ..........++.++.+|++|++++.++++       ++
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            5689999999999999999999999999999999986544 222222334578999999999988877664       58


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |++||+|+........+.+.++|  ...+++|+.++..+++++..    .+...++|++||.....+.+           
T Consensus        84 DiLVnnAg~~~~~~~~~~~~~~~--~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~-----------  150 (251)
T d1zk4a1          84 STLVNNAGIAVNKSVEETTTAEW--RKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP-----------  150 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT-----------
T ss_pred             eEEEeccccccccchhcccccch--hhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCC-----------
Confidence            99999999876665556666666  58999999999999887653    33235899999976432221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                    ....|+.+|.+.+.+.+.++.+     +||++..+.||.|..+........  .....    ....
T Consensus       151 --------------~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~----~~~~  210 (251)
T d1zk4a1         151 --------------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA--EEAMS----QRTK  210 (251)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTH--HHHHT----STTT
T ss_pred             --------------CchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCH--HHHHH----HHhC
Confidence                          2347999999999998887754     579999999999876532211100  00111    1111


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                      ++ .++         +...+|+|+++++++....  ..|..+
T Consensus       211 ~p-l~R---------~~~pedvA~~v~fL~S~~s~~itG~~i  242 (251)
T d1zk4a1         211 TP-MGH---------IGEPNDIAYICVYLASNESKFATGSEF  242 (251)
T ss_dssp             CT-TSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             CC-CCC---------CcCHHHHHHHHHHHhCchhCCCcCcEE
Confidence            22 344         5589999999999886433  355543

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=8.5e-22  Score=167.51  Aligned_cols=230  Identities=14%  Similarity=0.097  Sum_probs=163.2

Q ss_pred             CCCCCcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc
Q 035965            1 MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus         1 m~~~~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      |-....+..++|+++||||++.||++++++|+++|++|++++|+..+. .... +.....++.++.+|++|++++.++++
T Consensus         1 m~~~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~   80 (255)
T d1fmca_           1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALAD   80 (255)
T ss_dssp             CCCGGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHH
Confidence            444455667889999999999999999999999999999999986544 2211 12223578899999999988877654


Q ss_pred             -------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc----CCcceEEEeccceeeeecCCC
Q 035965           79 -------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----ESVKRVVLTSSVSTITAKDSS  147 (348)
Q Consensus        79 -------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~v~~SS~~~~~~~~~~  147 (348)
                             .+|++||+||....... +.+.++|  ...+++|+.++..+++.+...    + ..++|++||.....+.+  
T Consensus        81 ~~~~~~g~iDilvnnAG~~~~~~~-e~~~e~~--~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~~--  154 (255)
T d1fmca_          81 FAISKLGKVDILVNNAGGGGPKPF-DMPMADF--RRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNI--  154 (255)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCT-TCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCT--
T ss_pred             HHHHHcCCCCEeeeCCcCCCCCcc-cCCHHHH--HHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhcccc--
Confidence                   68999999997655432 4455666  689999999999998876542    3 46899999976443221  


Q ss_pred             CCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhh
Q 035965          148 GEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSP  224 (348)
Q Consensus       148 ~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~  224 (348)
                                             ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+......+.-  .....
T Consensus       155 -----------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e--~~~~~  209 (255)
T d1fmca_         155 -----------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPE--IEQKM  209 (255)
T ss_dssp             -----------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHH--HHHHH
T ss_pred             -----------------------ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHH--HHHHH
Confidence                                   2357999999999999999877   5899999999998765322111111  11111


Q ss_pred             hcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 035965          225 ITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCVK  275 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~~  275 (348)
                      ..    .++ .++         +..++|+|+++.+++....  ..|+ +.+.+.
T Consensus       210 ~~----~~p-l~R---------~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG  249 (255)
T d1fmca_         210 LQ----HTP-IRR---------LGQPQDIANAALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_dssp             HH----TCS-SCS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             Hh----cCC-CCC---------CcCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence            11    112 334         4589999999999986433  3554 455444

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=9.3e-22  Score=165.96  Aligned_cols=222  Identities=19%  Similarity=0.152  Sum_probs=159.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc---CCCEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM---GCDGV   83 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~V   83 (348)
                      ..++|++|||||++.||+++++.|+++|++|++++|+.++. ....   ..+++.++.+|++|.++++++++   ++|++
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDil   78 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK---ECPGIEPVCVDLGDWDATEKALGGIGPVDLL   78 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HSTTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---hcCCCeEEEEeCCCHHHHHHHHHHcCCCeEE
Confidence            35689999999999999999999999999999999987654 2222   22478899999999999988876   58999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ||+||........+.+.++|  +..+++|+.++..+.+++..    .+...++|++||.....+.+              
T Consensus        79 VnnAg~~~~~~~~~~~~~~~--~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~--------------  142 (242)
T d1cyda_          79 VNNAALVIMQPFLEVTKEAF--DRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP--------------  142 (242)
T ss_dssp             EECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------------
T ss_pred             EECCccccchhHHHHHHHHH--HHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC--------------
Confidence            99999876655555566666  68899999999999886643    22246899999976433221              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                 ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+........ -. ....+.   ...+ .+
T Consensus       143 -----------~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~-~~-~~~~~~---~~~p-l~  205 (242)
T d1cyda_         143 -----------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD-PE-FARKLK---ERHP-LR  205 (242)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC-HH-HHHHHH---HHST-TS
T ss_pred             -----------ccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC-HH-HHHHHH---hcCC-CC
Confidence                       2347999999999999999877   479999999998875521100000 00 111110   0111 23


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                      +         +...+|+|+++.+++....  ..|+ +.+.+
T Consensus       206 R---------~~~peeva~~v~fL~S~~s~~itG~~i~vDG  237 (242)
T d1cyda_         206 K---------FAEVEDVVNSILFLLSDRSASTSGGGILVDA  237 (242)
T ss_dssp             S---------CBCHHHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred             C---------CcCHHHHHHHHHHHhCchhcCcCCceEEeCc
Confidence            3         5589999999999986532  3554 44443

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.87  E-value=1.2e-21  Score=166.86  Aligned_cols=221  Identities=19%  Similarity=0.197  Sum_probs=145.0

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      ..+++|++|||||++.||.++++.|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++      
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            356789999999999999999999999999999999987644 2211 12233478999999999988766542      


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                        .+|++||+||........+.+.++|  ...+++|+.++..+++++..    .+ ..++|++||.....+.+       
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~--~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~-------  153 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDF--SFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSAS-------  153 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------------
T ss_pred             CCCcccccccccccCCCchhhCCHHHH--HHHHHHHhhhheeeehhhhhcccccc-ccccccccccccccccc-------
Confidence              3899999999876665556666666  68999999999999987754    33 57999999987543221       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+........   ......   .
T Consensus       154 ------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~---~~~~~~---~  209 (259)
T d1xq1a_         154 ------------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD---EFKKVV---I  209 (259)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------
T ss_pred             ------------------ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchH---HHHHHH---H
Confidence                              2346999999999999998877   479999999999876643221100   000110   1


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCC--CCCceEE
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQYI  271 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~y~  271 (348)
                      ...+ .++         +...+|+|.++++++...  ...|..+
T Consensus       210 ~~~p-l~R---------~~~pedvA~~v~fL~S~~s~~iTG~~i  243 (259)
T d1xq1a_         210 SRKP-LGR---------FGEPEEVSSLVAFLCMPAASYITGQTI  243 (259)
T ss_dssp             ------------------CCGGGGHHHHHHHTSGGGTTCCSCEE
T ss_pred             hCCC-CCC---------CcCHHHHHHHHHHHhCchhcCCcCcEE
Confidence            1122 334         448899999999998543  2355543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=1.9e-21  Score=164.56  Aligned_cols=222  Identities=17%  Similarity=0.130  Sum_probs=157.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      .++|++|||||++.||.++++.|+++|++|++++|+.+.......    .+..++.+|++|.+++.++++       ++|
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   78 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA----IGGAFFQVDLEDERERVRFVEEAAYALGRVD   78 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHH----HTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCeEEEEeCCCHHHHHHHHHHHHHhcCCCC
Confidence            468999999999999999999999999999999998764422221    146788999999988877664       689


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      ++||+||........+.+.++|  +..+++|+.++..+++++...   ....+||++||.....+.+             
T Consensus        79 iLVnnAG~~~~~~~~~~~~e~~--~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~-------------  143 (248)
T d2d1ya1          79 VLVNNAAIAAPGSALTVRLPEW--RRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ-------------  143 (248)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT-------------
T ss_pred             eEEEeCcCCCCCChhhCCHHHH--HHHHHhhhhhHhhhhhhhccccccccccccccccccccccccc-------------
Confidence            9999999876665556666666  688999999999999887642   2257999999987543322             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCC--CCchHHHHHhhhcCCCCccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSS--VPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~  233 (348)
                                  ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+.....  .........+....   ..+
T Consensus       144 ------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---~~p  208 (248)
T d2d1ya1         144 ------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWED---LHA  208 (248)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHT---TST
T ss_pred             ------------ccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHh---cCC
Confidence                        2357999999999999998877   479999999998865421000  00000000001111   111


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                       .++         +...+|+++++.+++....  ..|+ +.+.+
T Consensus       209 -l~R---------~~~pedia~~v~fL~S~~s~~itG~~i~vDG  242 (248)
T d2d1ya1         209 -LRR---------LGKPEEVAEAVLFLASEKASFITGAILPVDG  242 (248)
T ss_dssp             -TSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CCC---------CcCHHHHHHHHHHHhCchhcCCCCcEEEcCc
Confidence             233         5589999999999986432  3554 45543

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=6.2e-22  Score=167.15  Aligned_cols=220  Identities=18%  Similarity=0.144  Sum_probs=159.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .++|+++||||++.||+++++.|+++|++|++++|+.++. ......  ..+..++.+|++|.+++.++++       ++
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL--GANGKGLMLNVTDPASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--GGGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh--CCCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence            4679999999999999999999999999999999987654 222211  2367889999999988877664       58


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      |++||+|+........+.+.++|  ...+++|+.++..+++++...   ....+||++||.....+.+            
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~--~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~------------  145 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEW--NDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG------------  145 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------------
T ss_pred             ceehhhhhhcccccccccccccc--ccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCC------------
Confidence            99999999877666556666666  588999999999999987532   1257899999987543322            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   ....|+.||.+.+.+.+.++.+   +||++..+.||.|-.+......+.    ....+..   .++ 
T Consensus       146 -------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~----~~~~~~~---~~p-  204 (243)
T d1q7ba_         146 -------------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDD----QRAGILA---QVP-  204 (243)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH----HHHHHHT---TCT-
T ss_pred             -------------CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhh----HHHHHHh---cCC-
Confidence                         2347999999999999999877   579999999998865422111111    1111111   112 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY-ICCV  274 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y-~~~~  274 (348)
                      .++         +...+|+|+++.+++....  ..|+. .+.+
T Consensus       205 l~R---------~~~pedvA~~v~fL~S~~s~~itGq~i~vdG  238 (243)
T d1q7ba_         205 AGR---------LGGAQEIANAVAFLASDEAAYITGETLHVNG  238 (243)
T ss_dssp             TSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCC---------CCCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            233         5589999999999986533  35554 4433

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=2e-21  Score=164.81  Aligned_cols=223  Identities=16%  Similarity=0.101  Sum_probs=157.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cc-cCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SK-WTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++|++|||||++.||+++++.|+++|++|++++|+..+. ... .+ .....++.++.+|++|++++.++++      
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35689999999999999999999999999999999986543 211 11 1113468889999999988877664      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                       ++|++||+||........+.+.++|  ...+++|+.++..+++++...   ....++|++||....... .        
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~--~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~-~--------  150 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEF--RQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT-M--------  150 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC-S--------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHH--HHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcccc-C--------
Confidence             6899999999866655555666666  689999999999998876542   225799999986431111 1        


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                     +....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+........ .........    .
T Consensus       151 ---------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~----~  210 (251)
T d1vl8a_         151 ---------------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD-PEKLDYMLK----R  210 (251)
T ss_dssp             ---------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC-HHHHHHHHH----T
T ss_pred             ---------------ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCC-HHHHHHHHh----c
Confidence                           02347999999999999998876   479999999999876643211000 001111111    1


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                      ++ .++         +..++|+|+++++++....  ..|+.+
T Consensus       211 ~p-l~R---------~~~pedvA~~v~fL~S~~a~~itG~~i  242 (251)
T d1vl8a_         211 IP-LGR---------TGVPEDLKGVAVFLASEEAKYVTGQII  242 (251)
T ss_dssp             CT-TSS---------CBCGGGGHHHHHHHHSGGGTTCCSCEE
T ss_pred             CC-CCC---------CCCHHHHHHHHHHHhCchhCCCcCcEE
Confidence            12 334         4478999999999886433  355543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.87  E-value=4.2e-21  Score=162.78  Aligned_cols=221  Identities=16%  Similarity=0.116  Sum_probs=158.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .++|++|||||++.||.++++.|+++|++|++++|+..+. ...+.  ...++.++.+|++|.+++.++++       .+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE--LGDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--TGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--hCCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence            5689999999999999999999999999999999987654 22221  12468899999999998877664       68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      |++||+|+........+.+.++|  ...+++|+.++..+++++...   ....+||++||.....+.+            
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~--~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~------------  146 (254)
T d1hdca_          81 DGLVNNAGISTGMFLETESVERF--RKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLA------------  146 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------
T ss_pred             cEEEecCcccccccccccccccc--chhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccccc------------
Confidence            99999999876665556666666  588999999999999977532   1257999999987543222            


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                   ....|+.+|.+.+.+.+.++.+   ++|++..+.||.|..+...       .............++ 
T Consensus       147 -------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~-------~~~~~~~~~~~~~~p-  205 (254)
T d1hdca_         147 -------------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA-------ETGIRQGEGNYPNTP-  205 (254)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------HHTCCCSTTSCTTST-
T ss_pred             -------------chhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccch-------hcCHHHHHHHHhCCC-
Confidence                         2357999999999999999876   4799999999988654210       000000011111122 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                      .++.        -...+|+|.++++++....  ..|+ +.+.+
T Consensus       206 l~R~--------g~~PedvA~~v~fL~S~~a~~itG~~i~vDG  240 (254)
T d1hdca_         206 MGRV--------GNEPGEIAGAVVKLLSDTSSYVTGAELAVDG  240 (254)
T ss_dssp             TSSC--------B-CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCC--------CCCHHHHHHHHHHHhchhhCCCCCceEEeCC
Confidence            2222        1357999999999986433  3554 45543

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.87  E-value=1.6e-21  Score=166.23  Aligned_cols=224  Identities=13%  Similarity=0.083  Sum_probs=158.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++|+++||||++.||.++++.|+++|++|++++|+..+.  .... +.....++.++.+|++|++++.++++      
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999999999976432  1111 11223468889999999988877664      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       ++|++||+||........+.+.++|  ...+++|+.++..+.+++..    .+....||++||.+...+.+        
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~--~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~--------  153 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDW--NKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP--------  153 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT--------
T ss_pred             CCCCEeeccceecCCcchhhcCHHHH--HHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCc--------
Confidence             6899999999876665556666666  68899999999988887653    34235688999976432221        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       ....|+.+|.+.+.+.+.++.+   +||++..+.||.|..+.......  -......+..   
T Consensus       154 -----------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~--~~~~~~~~~~---  211 (261)
T d1geea_         154 -----------------LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA--DPEQRADVES---  211 (261)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH--SHHHHHHHHT---
T ss_pred             -----------------cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcC--CHHHHHHHHh---
Confidence                             2347999999999999998877   47999999999987653211000  0001111111   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE-EEe
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY-ICC  273 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y-~~~  273 (348)
                      .++ .++         +...+|+|+++.+++....  ..|.. .+.
T Consensus       212 ~~p-l~R---------~~~pediA~~v~fL~S~~s~~itG~~i~vD  247 (261)
T d1geea_         212 MIP-MGY---------IGEPEEIAAVAAWLASSEASYVTGITLFAD  247 (261)
T ss_dssp             TCT-TSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cCC-CCC---------CCCHHHHHHHHHHHhCchhcCCcCCeEEEC
Confidence            122 334         4589999999999986433  35554 443

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.86  E-value=6.2e-21  Score=162.39  Aligned_cols=225  Identities=17%  Similarity=0.145  Sum_probs=157.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      ++++|++|||||++.||++++++|+++|++|++++|++.+. ...+ +......+.++.+|+++.++++++++       
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999987543 2211 12233567889999999988766543       


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                       .+|+++|+|+........+.+.++|  ...+++|+.++..+.+++...   +...++|++||.....+.+         
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~--~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~---------  151 (258)
T d1ae1a_          83 GKLNILVNNAGVVIHKEAKDFTEKDY--NIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP---------  151 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT---------
T ss_pred             CCcEEEeccccccccCccccCCHHHH--hhhhhhccccccccccccccccccccccccccccccccccccc---------
Confidence             3799999999877665555556666  689999999999998877532   2267999999987533221         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCc---hHHHHHhhhcCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPS---SIQVLLSPITGD  228 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~---~~~~~~~~~~~~  228 (348)
                                      ....|+.+|.+.+.+.+.++.+   ++|++..+.||.+..+........   ....+.....  
T Consensus       152 ----------------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--  213 (258)
T d1ae1a_         152 ----------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIV--  213 (258)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHH--
T ss_pred             ----------------cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHh--
Confidence                            2347999999999999999877   479999999999987643221100   0111111111  


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcC--CCCCceEEEe
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEN--DRAQGQYICC  273 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~--~~~~~~y~~~  273 (348)
                        ..+ .++         +...+|+|.++.+++..  ....|..+..
T Consensus       214 --~~p-lgR---------~~~pediA~~v~fL~S~~s~~itG~~i~v  248 (258)
T d1ae1a_         214 --KTP-MGR---------AGKPQEVSALIAFLCFPAASYITGQIIWA  248 (258)
T ss_dssp             --HST-TCS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             --cCC-CCC---------CcCHHHHHHHHHHHhChhhCCCcCcEEEe
Confidence              111 233         56999999999999954  3346654433

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.86  E-value=3e-21  Score=164.85  Aligned_cols=226  Identities=15%  Similarity=0.093  Sum_probs=154.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccc--cCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSK--WTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      +++|++|||||++.||+++++.|+++|++|++++|+..+.  .....  .....++.++.+|++|.+++.++++      
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999975322  11111  1123468899999999998887764      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       ++|++||+||........+.+.++|  ...+++|+.++..+++++..    .+ ..++|++||.....+.+        
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~--~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~--------  150 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKW--DAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASA--------  150 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT--------
T ss_pred             CCCcEEEeecccccCCchhhhhHHhh--hhhhhccccccccccchhhhhHhhcC-CceEeecccccceeccC--------
Confidence             5899999999876655555555666  68899999999988887653    33 57999999987543322        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHH--HH--hhhc
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQV--LL--SPIT  226 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~--~~--~~~~  226 (348)
                                       ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+............  ..  ....
T Consensus       151 -----------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  213 (260)
T d1x1ta1         151 -----------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAAR  213 (260)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------
T ss_pred             -----------------CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHH
Confidence                             2347999999999999999877   5799999999998766432211100000  00  0000


Q ss_pred             CC-CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEE
Q 035965          227 GD-SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYIC  272 (348)
Q Consensus       227 ~~-~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~  272 (348)
                      .. ...+| .++         +...+|+|+++++++....  ..|+.+.
T Consensus       214 ~~~~~~~P-l~R---------~g~pediA~~v~fL~S~~a~~itG~~i~  252 (260)
T d1x1ta1         214 ELLSEKQP-SLQ---------FVTPEQLGGTAVFLASDAAAQITGTTVS  252 (260)
T ss_dssp             -CHHHHCT-TCC---------CBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHhcCC-CCC---------CcCHHHHHHHHHHHhChhhCCCcCCEEE
Confidence            00 00111 233         5689999999999986432  3565433

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.86  E-value=3.4e-21  Score=164.25  Aligned_cols=226  Identities=18%  Similarity=0.125  Sum_probs=159.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+++|++|||||++.||+++++.|+++|++|++++|+..+. .... +.....++.++.+|++|++++.++++       
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   84 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999986644 2211 12233567889999999988776542       


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                       .+|++||+||........+.+.++|  ...+++|+.++..+.+++...   ....++|++||.....+.+         
T Consensus        85 ~~idilvnnAG~~~~~~~~~~~~e~~--~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~---------  153 (259)
T d2ae2a_          85 GKLNILVNNAGIVIYKEAKDYTVEDY--SLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP---------  153 (259)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT---------
T ss_pred             CCceEEEECCceeccCccccCCHHHH--HHHHhcccceeEEEEeeccchhhhhcccccccccccccccccc---------
Confidence             4899999999876655555666666  689999999999988876532   2257999999986432221         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCC--chHHHHHhhhcCCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVP--SSIQVLLSPITGDS  229 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~  229 (348)
                                      ....|+.+|.+.+.+.+.++.+   ++|++..+.||.|-.+.......  .....+.....   
T Consensus       154 ----------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~---  214 (259)
T d2ae2a_         154 ----------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLID---  214 (259)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHH---
T ss_pred             ----------------cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHh---
Confidence                            2357999999999999999877   47999999999986542110000  00011111111   


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY-ICCV  274 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y-~~~~  274 (348)
                       .++ .++         +...+|+|+++++++....  ..|+. .+.+
T Consensus       215 -~~p-l~R---------~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  251 (259)
T d2ae2a_         215 -RCA-LRR---------MGEPKELAAMVAFLCFPAASYVTGQIIYVDG  251 (259)
T ss_dssp             -TST-TCS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -cCC-CCC---------CcCHHHHHHHHHHHhCchhCCCcCcEEEECC
Confidence             112 334         4589999999999886433  35554 4433

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.1e-20  Score=159.88  Aligned_cols=219  Identities=16%  Similarity=0.151  Sum_probs=155.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      -.++|++|||||++.||.++++.|+++|++|++++|+.++. ....   ..+++.++.+|++|.+++.++++       +
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~---~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQ---ELPGAVFILCDVTQEDDVKTLVSETIRRFGR   79 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---hcCCCeEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            35689999999999999999999999999999999986654 2222   22478899999999998877664       5


Q ss_pred             CCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           80 CDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      +|++||+||...... ..+.+.++|  ...+++|+.++..+++++...  ....++|++||.....+.+           
T Consensus        80 iDilVnnAG~~~~~~~~~~~~~~~~--~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~-----------  146 (250)
T d1ydea1          80 LDCVVNNAGHHPPPQRPEETSAQGF--RQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA-----------  146 (250)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT-----------
T ss_pred             CCEEEecccccccccccccccHHHH--HHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccccc-----------
Confidence            899999999754332 334455556  688999999999999877643  1136899999987543222           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCC---CCCchHHHHHhhhcCCCC
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTS---SVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~  230 (348)
                                    ....|+.+|.+.+.+.+.++.+   ++|++..+.||.|-.+....   ..+.....+......   
T Consensus       147 --------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~---  209 (250)
T d1ydea1         147 --------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLA---  209 (250)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHT---
T ss_pred             --------------CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhc---
Confidence                          2357999999999999999876   47999999999985442100   001111111121111   


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcC-CCCCceE
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMEN-DRAQGQY  270 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~-~~~~~~y  270 (348)
                       .+ .++         +...+|+|+++++++.. ....|+-
T Consensus       210 -~p-l~R---------~g~p~eva~~v~fL~Sda~~itG~~  239 (250)
T d1ydea1         210 -QP-LGR---------MGQPAEVGAAAVFLASEANFCTGIE  239 (250)
T ss_dssp             -ST-TSS---------CBCHHHHHHHHHHHHHHCTTCCSCE
T ss_pred             -CC-CCC---------CCCHHHHHHHHHHHhCccCCCcCCe
Confidence             11 233         55899999999998853 2235543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.85  E-value=2e-20  Score=159.15  Aligned_cols=223  Identities=16%  Similarity=0.120  Sum_probs=158.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .++|+++||||++.||+++++.|+++|++|++++|+.++. ......  ..++.++.+|++|++++.++++       .+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~--~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI--GPAACAIALDVTDQASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--CCceEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            4679999999999999999999999999999999986654 222211  3578899999999998887764       68


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      |++||+||........+.+.++|  ...+++|+.++..+++++..    .+...+||++||.....+.+           
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~--~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~-----------  147 (256)
T d1k2wa_          81 DILVNNAALFDLAPIVEITRESY--DRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEA-----------  147 (256)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-----------
T ss_pred             cEEEeecccccccccccCCHHHH--HhhhceeeeccccchhhccchhHHhccCCccccccchhhccccc-----------
Confidence            99999999876655555566666  68899999999999886542    22357899999987543221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC-----
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD-----  228 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~-----  228 (348)
                                    ....|+.+|.+.+.+.+.++.+   +||++..+.||.+-.+....    ..........-.     
T Consensus       148 --------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~----~~~~~~~~~~~~~~~~~  209 (256)
T d1k2wa_         148 --------------LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDG----VDAKFADYENLPRGEKK  209 (256)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHH----HHHHHHHHHTCCTTHHH
T ss_pred             --------------cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhh----hhhhhhhhccCChHHHH
Confidence                          2357999999999999998876   47999999999887663211    000000000000     


Q ss_pred             ---CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          229 ---SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       229 ---~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                         ...+| .++         +...+|+|.++++++....  ..|+ +.+.+
T Consensus       210 ~~~~~~~P-lgR---------~~~p~evA~~v~fL~S~~a~~iTG~~i~vDG  251 (256)
T d1k2wa_         210 RQVGAAVP-FGR---------MGRAEDLTGMAIFLATPEADYIVAQTYNVDG  251 (256)
T ss_dssp             HHHHHHST-TSS---------CBCHHHHHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred             HHHHhcCC-CCC---------CcCHHHHHHHHHHHhCchhCCccCceEEECc
Confidence               00111 334         5589999999999886432  3554 44543

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.85  E-value=6.4e-21  Score=162.55  Aligned_cols=224  Identities=18%  Similarity=0.127  Sum_probs=158.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc-cccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF-SKWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +|.+|||||++.||.++++.|+++|++|++++|+..+. ... .+.....++.++.+|++|++++.++++       ++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            57789999999999999999999999999999986544 221 112233578899999999998877664       589


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-----CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-----ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      ++|||||........+.+.++|  ...+++|+.++..+++++...     ....++|++||.....+.+           
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~--~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~-----------  148 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELW--LDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV-----------  148 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCT-----------
T ss_pred             EEEecccccCCCChHHcCHHHH--HHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccc-----------
Confidence            9999999876655555556666  689999999999999988642     1256899999986543322           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCC-------CCchHHHHHhhhc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSS-------VPSSIQVLLSPIT  226 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~-------~~~~~~~~~~~~~  226 (348)
                                    ....|+.+|.+.+.+.+.++.+.   +|++..+.||.|-.+.....       ...........+.
T Consensus       149 --------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~  214 (257)
T d2rhca1         149 --------------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRIT  214 (257)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred             --------------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHH
Confidence                          23479999999999999999884   69999999999854421100       0000000111111


Q ss_pred             CCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC--CCCceE-EEec
Q 035965          227 GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQY-ICCV  274 (348)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~y-~~~~  274 (348)
                      .   .+| .++         +...+|+|+++++++...  ...|+. .+.+
T Consensus       215 ~---~~P-lgR---------~~~pedia~~v~fL~S~~s~~itG~~i~vDG  252 (257)
T d2rhca1         215 A---RVP-IGR---------YVQPSEVAEMVAYLIGPGAAAVTAQALNVCG  252 (257)
T ss_dssp             T---TST-TSS---------CBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             h---cCC-CCC---------CcCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence            1   122 344         558999999999999643  235554 4433

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.85  E-value=8.5e-21  Score=161.51  Aligned_cols=170  Identities=18%  Similarity=0.107  Sum_probs=132.2

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CCCE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   82 (348)
                      |.+|||||++.||.+++++|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       ++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            4469999999999999999999999999999987644 2221 11223578899999999998877654       6899


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      +||+||........+.+.++|  ...+++|+.++..+++++..    .+...++|++||.....+.+             
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~--~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~-------------  146 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIV--DKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP-------------  146 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-------------
T ss_pred             EEecccccccCcHHHhhhhhh--hhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCc-------------
Confidence            999999866555445555666  68999999999999887643    33356799999976433221             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccC
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGP  208 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~  208 (348)
                                  ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+
T Consensus       147 ------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  187 (255)
T d1gega_         147 ------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP  187 (255)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred             ------------ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccCh
Confidence                        2357999999999999998876   4799999999988554

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.85  E-value=1.5e-21  Score=166.24  Aligned_cols=224  Identities=16%  Similarity=0.090  Sum_probs=155.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-c--cCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-K--WTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~--~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .++|+++||||++.||+.+++.|+++|++|++++|+..+. .... +  .....++.++.+|++|++++.++++      
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999987543 1111 1  1123468889999999998877664      


Q ss_pred             -CCCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       .+|++||+||...... ..+.+.++|  +..+++|+.++..+++++...   ....+||++||.....+.+        
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~--~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~--------  151 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEF--DKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIG--------  151 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCS--------
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHH--HHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCC--------
Confidence             6899999999754432 333455666  689999999999999877432   1257899999987543221        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCC-----CCchHHHHHhhh
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSS-----VPSSIQVLLSPI  225 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~-----~~~~~~~~~~~~  225 (348)
                                       ....|+.+|.+.+.+.+.++.+   ++|++..+.||.|..|.....     ............
T Consensus       152 -----------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  214 (258)
T d1iy8a_         152 -----------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFI  214 (258)
T ss_dssp             -----------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHH
Confidence                             2357999999999999998876   479999999999865421100     000000011111


Q ss_pred             cCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE-EEe
Q 035965          226 TGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY-ICC  273 (348)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y-~~~  273 (348)
                      .    .++ .++         +...+|+|+++++++....  ..|+. .+.
T Consensus       215 ~----~~p-l~R---------~~~p~dvA~~v~fL~S~~s~~itG~~i~VD  251 (258)
T d1iy8a_         215 Q----VNP-SKR---------YGEAPEIAAVVAFLLSDDASYVNATVVPID  251 (258)
T ss_dssp             T----TCT-TCS---------CBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             h----cCC-CCC---------CcCHHHHHHHHHHHhCchhcCCcCceEEcC
Confidence            1    111 233         5589999999999986432  35554 443

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.85  E-value=1.8e-20  Score=159.85  Aligned_cols=173  Identities=18%  Similarity=0.126  Sum_probs=135.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .++|++|||||++.||.++++.|+++|++|++++|+..+. .... +.....++.++.+|++|.+++.++++       .
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999999999999999986544 2221 12234578899999999988877664       6


Q ss_pred             CCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCccc
Q 035965           80 CDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        80 ~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      +|++||+||.... ....+.+.++|  ...+++|+.++..+++++...   ....++|++||.....+.+          
T Consensus        83 iDilVnnaG~~~~~~~~~~~~~~~~--~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~----------  150 (260)
T d1zema1          83 IDFLFNNAGYQGAFAPVQDYPSDDF--ARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP----------  150 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT----------
T ss_pred             CCeehhhhccccccCccccccHHHH--HhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCc----------
Confidence            8999999997544 33334555666  588999999999998877532   2257999999987543322          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccC
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGP  208 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~  208 (348)
                                     ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+
T Consensus       151 ---------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~  191 (260)
T d1zema1         151 ---------------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  191 (260)
T ss_dssp             ---------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             ---------------chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence                           2347999999999999999877   4799999999998765

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=2.7e-20  Score=161.53  Aligned_cols=232  Identities=16%  Similarity=0.094  Sum_probs=160.8

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-c----ccccc--CCCCCeEEEEccCCCcchHHHhhc-
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-Q----IFSKW--TRSDRLRLFQADLQVEGSFDKAVM-   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~-   78 (348)
                      ..+++|++|||||++.||.++++.|+++|++|++++|+..+. .    +....  ....++.++.+|++|.+++.++++ 
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            346789999999999999999999999999999999986543 1    11111  123468899999999998877664 


Q ss_pred             ------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCC
Q 035965           79 ------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGE  149 (348)
Q Consensus        79 ------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~  149 (348)
                            ++|++||+|+........+.+.++|  ...+++|+.++..+++++...   ....++|++||.. ....+    
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~--~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~-~~~~~----  160 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGW--HAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFP----  160 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCT----
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhh--hhhhcccccchhhHHHHHHHhhccccccccccccccc-ccccc----
Confidence                  6899999999866655556666666  588999999999999887642   1145688776643 11111    


Q ss_pred             CCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC---CCcEEEEecCccccCCCCCCCCchHHHHHhhhc
Q 035965          150 WRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN---KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPIT  226 (348)
Q Consensus       150 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~  226 (348)
                                           ....|+.+|.+.+.+.+.++.+.   ||++..+.||.|..+..........   .....
T Consensus       161 ---------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~---~~~~~  216 (297)
T d1yxma1         161 ---------------------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWG---QSFFE  216 (297)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGG---GGGGT
T ss_pred             ---------------------ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccC---HHHHH
Confidence                                 23579999999999999998774   7999999999997764322111110   01111


Q ss_pred             CCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEEeccCcCh
Q 035965          227 GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYICCVKSCPI  279 (348)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~~~~~~s~  279 (348)
                      .....++ .++         +...+|+|+++++++....  ..|+.+..+...|+
T Consensus       217 ~~~~~~p-lgR---------~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~sl  261 (297)
T d1yxma1         217 GSFQKIP-AKR---------IGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSL  261 (297)
T ss_dssp             TGGGGST-TSS---------CBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhcCC-CCC---------CcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChhh
Confidence            1111222 344         4489999999999996432  35654433333443

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.85  E-value=7.3e-21  Score=160.60  Aligned_cols=217  Identities=18%  Similarity=0.133  Sum_probs=154.5

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc-c-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------CCC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK-L-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------GCD   81 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~-~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   81 (348)
                      +.||||||++.||+++++.|+++|++|++.+++..+ . .... +.....++.++.+|++|.+++.++++       ++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999887664432 2 1111 11123468889999999988877654       689


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCC
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDES  157 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~  157 (348)
                      ++||+|+........+.+.++|  +..+++|+.++..+++++..    .+ ..+||++||.....+.+.           
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~--~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~-----------  147 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQW--DEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIG-----------  147 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTT-----------
T ss_pred             ccccccccccccchhccchHHH--HHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCCCC-----------
Confidence            9999999876665556666666  68899999999999887754    33 579999999876543322           


Q ss_pred             CCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          158 CQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       158 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                    ...|+.+|.+.+.+.+.++.+   +||++..+.||.+-.+.....    ...........   .+ 
T Consensus       148 --------------~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~----~~~~~~~~~~~---~p-  205 (244)
T d1edoa_         148 --------------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL----GEDMEKKILGT---IP-  205 (244)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT----CHHHHHHHHTS---CT-
T ss_pred             --------------CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh----hHHHHHHHHhc---CC-
Confidence                          347999999999999999877   589999999998865422111    11111111111   22 


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcCCC---CCceEEEe
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMENDR---AQGQYICC  273 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~---~~~~y~~~  273 (348)
                      .++         +...+|+|+++.+++.++.   ..|+.+..
T Consensus       206 l~R---------~~~p~dvA~~v~fLa~S~~a~~itG~~i~v  238 (244)
T d1edoa_         206 LGR---------TGQPENVAGLVEFLALSPAASYITGQAFTI  238 (244)
T ss_dssp             TCS---------CBCHHHHHHHHHHHHHCSGGGGCCSCEEEE
T ss_pred             CCC---------CcCHHHHHHHHHHHHCCchhcCCcCCeEEe
Confidence            334         5589999999999864332   35554433

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.84  E-value=2.1e-20  Score=157.40  Aligned_cols=200  Identities=15%  Similarity=0.133  Sum_probs=150.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCe-------EEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc----
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYI-------VHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~-------V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      +.||||||++.||+++++.|+++|++       |++++|+..+. .... +.....++.++.+|++|.+++.++++    
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            34799999999999999999999987       88899986544 2221 12233567889999999998877664    


Q ss_pred             ---CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCC
Q 035965           79 ---GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 ---~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                         ++|++||+|+........+.+.++|  ...+++|+.++..+++++..    .+ ..++|++||.....+.+      
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~--~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~------  152 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDF--DYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFR------  152 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT------
T ss_pred             HcCCcceeecccccccCCccccCCHHHH--hhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCCC------
Confidence               5899999999877666556666666  68999999999998887764    23 57899999987543322      


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                                         ....|+.||.+.+.+.+.++.+   +|+++..+.||.|-.+.....               
T Consensus       153 -------------------~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~---------------  198 (240)
T d2bd0a1         153 -------------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV---------------  198 (240)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC---------------
T ss_pred             -------------------CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc---------------
Confidence                               2347999999999999998776   579999999999866532210               


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                      ....           ..-+...+|+|+++++++..+.
T Consensus       199 ~~~~-----------~~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         199 DDEM-----------QALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             CSTT-----------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             CHhh-----------HhcCCCHHHHHHHHHHHHcCCc
Confidence            0000           0114578999999999998764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.84  E-value=3e-20  Score=157.69  Aligned_cols=225  Identities=17%  Similarity=0.136  Sum_probs=156.9

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      +++|+++||||++.||.++++.|+++|++|++++|+..+. .....  ...+..++.+|++|.+++.++++       .+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAE--LGERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH--HCTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--hCCCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5689999999999999999999999999999999976544 22221  12467889999999988877664       58


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      |++||+||........+.+.++|  +..+++|+.++..+++++...  ....+||++||.....+.+             
T Consensus        82 DilVnnAG~~~~~~~~~~~~~~~--~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~-------------  146 (253)
T d1hxha_          82 NVLVNNAGILLPGDMETGRLEDF--SRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIE-------------  146 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCT-------------
T ss_pred             CeEEecccccCCCCcccCCHHHH--HHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcc-------------
Confidence            99999999876655555666666  689999999999888876542  1237899999987533221             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                  ....|+.+|.+.+.+.+.++.+     ++|++..+.||.|..+......+...  ......... ...
T Consensus       147 ------------~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~--~~~~~~~~~-~~~  211 (253)
T d1hxha_         147 ------------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGV--SKEMVLHDP-KLN  211 (253)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTC--CHHHHBCBT-TTB
T ss_pred             ------------ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchh--hHHHHHhCc-ccc
Confidence                        2357999999999998887755     35999999999987542110000000  000111111 111


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                      ..|+         +...+|+|+++++++....  ..|+ +.+.+
T Consensus       212 ~~gr---------~~~pedvA~~v~fL~S~~s~~itG~~i~VDG  246 (253)
T d1hxha_         212 RAGR---------AYMPERIAQLVLFLASDESSVMSGSELHADN  246 (253)
T ss_dssp             TTCC---------EECHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             ccCC---------CCCHHHHHHHHHHHhChhhCCCcCcEEEECc
Confidence            1233         6689999999999986433  3555 44433

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.84  E-value=4e-20  Score=155.77  Aligned_cols=218  Identities=19%  Similarity=0.185  Sum_probs=152.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   80 (348)
                      .++|++|||||++.||+.+++.|+++|++|++++|+..+. .....  ...++.++++|+++++++.++++       ++
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA--LEAEAIAVVADVSDPKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--CCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--cCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            4689999999999999999999999999999999987655 22222  23578899999999998877654       58


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCC-cceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES-VKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      |++||+|+........+.+.++|  ...+++|+.+...+.+++...-. .+.++++||.+....                
T Consensus        81 DiLinnAg~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~----------------  142 (241)
T d2a4ka1          81 HGVAHFAGVAHSALSWNLPLEAW--EKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA----------------  142 (241)
T ss_dssp             CEEEEGGGGTTTTC----CHHHH--HHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH----------------
T ss_pred             cEeccccccccccchhhhhcccc--ccccccccccccccccccccccccccceeeccccccccc----------------
Confidence            99999999876655555555666  58899999999999998775432 334555455431110                


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                                +....|+.+|.+.|.+.+.++++   +|+++..+.||.+-.+......+..   .....+.    .+ .+
T Consensus       143 ----------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~---~~~~~~~----~p-~~  204 (241)
T d2a4ka1         143 ----------FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWA---WEQEVGA----SP-LG  204 (241)
T ss_dssp             ----------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHH---HHHHHHT----ST-TC
T ss_pred             ----------cCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhH---HHHHHhC----CC-CC
Confidence                      02346999999999999999888   4699999999998655322211111   1111111    11 23


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEEe
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYICC  273 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~~  273 (348)
                      +         +...+|+|+++.+++....  ..|..+..
T Consensus       205 r---------~~~p~dva~~v~fL~S~~s~~itG~~i~v  234 (241)
T d2a4ka1         205 R---------AGRPEEVAQAALFLLSEESAYITGQALYV  234 (241)
T ss_dssp             S---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             C---------CcCHHHHHHHHHHHhcchhCCCcCceEEe
Confidence            3         5589999999999997533  46654433

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.83  E-value=3.4e-20  Score=159.39  Aligned_cols=229  Identities=19%  Similarity=0.180  Sum_probs=155.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc----cccCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF----SKWTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .++|+++||||++.||+++++.|+++|++|++++|+..+. ...    .......++.++.+|++|++++.++++     
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            3579999999999999999999999999999999986543 211    111122468899999999988877664     


Q ss_pred             --CCCEEEEccccCcccc--ccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDI--NVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWR  151 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~--~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~  151 (348)
                        .+|++||+||......  ....+.++|  ...+++|+.++..+++++...   +...+++++||.....+.+      
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~--~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~------  153 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELY--QKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHS------  153 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCT------
T ss_pred             cCCceEEEeecccccccccccccCCHHHH--HHHHhhcccccccccccccccccccccccccchhhhhccccCC------
Confidence              5899999999654332  122334455  578999999999988877642   2246788888765332211      


Q ss_pred             CcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCC-CC-chHHHHHhhhc
Q 035965          152 PVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSS-VP-SSIQVLLSPIT  226 (348)
Q Consensus       152 ~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~-~~-~~~~~~~~~~~  226 (348)
                                         ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.|..... .. .........+.
T Consensus       154 -------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  214 (274)
T d1xhla_         154 -------------------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIG  214 (274)
T ss_dssp             -------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHH
T ss_pred             -------------------CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHH
Confidence                               2347999999999999988877   479999999999976532111 00 01111112222


Q ss_pred             CCCCccccccccccCCCCcceeeHHHHHHHHHHhhcC---CCCCce-EEEec
Q 035965          227 GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEN---DRAQGQ-YICCV  274 (348)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~---~~~~~~-y~~~~  274 (348)
                      .....+| .++         +...+|+|+++++++..   ....|+ +.+.+
T Consensus       215 ~~~~~iP-lgR---------~g~pediA~~v~fL~S~d~s~~itG~~i~vDG  256 (274)
T d1xhla_         215 SRKECIP-VGH---------CGKPEEIANIIVFLADRNLSSYIIGQSIVADG  256 (274)
T ss_dssp             HCTTTCT-TSS---------CBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             HHHcCCC-CCC---------CcCHHHHHHHHHHHcCCccccCccCcEEEeCc
Confidence            2222233 445         44899999999999853   224555 44433

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.83  E-value=7.3e-20  Score=155.33  Aligned_cols=218  Identities=13%  Similarity=0.029  Sum_probs=150.6

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc--cCCCCCeEEEEccCC-CcchHHHhhc-----
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK--WTRSDRLRLFQADLQ-VEGSFDKAVM-----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~--~~~~~~~~~~~~Dl~-d~~~~~~~~~-----   78 (348)
                      .+++|+||||||++.||..++++|+++|++|+++.|+..+. ....+  .....++.++.+|++ +.+++.++++     
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999998876544 22221  123346889999998 5445555443     


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc------CCcceEEEeccceeeeecCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS------ESVKRVVLTSSVSTITAKDSSGEW  150 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~------~~~~~~v~~SS~~~~~~~~~~~~~  150 (348)
                        ++|++||+||......         . +..+++|+.|+.++.+++...      +...++|++||...+.+.+     
T Consensus        82 ~g~iDilvnnAG~~~~~~---------~-~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~-----  146 (254)
T d1sbya1          82 LKTVDILINGAGILDDHQ---------I-ERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH-----  146 (254)
T ss_dssp             HSCCCEEEECCCCCCTTC---------H-HHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-----
T ss_pred             cCCCCEEEeCCCCCCHHH---------H-HHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCC-----
Confidence              6899999999654322         2 588999999999998877542      2346899999987543322     


Q ss_pred             CCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          151 RPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       151 ~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                          ....|+.||.+...+.+.++.+   +++++..+.||.|..+..... ...        ..
T Consensus       147 --------------------~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~-~~~--------~~  197 (254)
T d1sbya1         147 --------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF-NSW--------LD  197 (254)
T ss_dssp             --------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC-CCG--------GG
T ss_pred             --------------------CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcccccc-ccc--------hh
Confidence                                2347999999999999998876   479999999999976521100 000        00


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICCVK  275 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~~~  275 (348)
                      ....+.   ...   ..+.....+++|++++.++++...+.++.+.+.
T Consensus       198 ~~~~~~---~~~---~~~~~~~~e~va~~~~~~~~~~~tG~vi~vdgG  239 (254)
T d1sbya1         198 VEPRVA---ELL---LSHPTQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             SCTTHH---HHH---TTSCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             HHHHHH---hcc---ccCCCCCHHHHHHHHHHhhhCCCCCCEEEECCC
Confidence            000000   000   122355899999999999887654445666543

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.83  E-value=2.1e-20  Score=159.95  Aligned_cols=223  Identities=18%  Similarity=0.174  Sum_probs=146.3

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccc----cccCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIF----SKWTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .++|.+|||||++.||++++++|+++|++|++++|+..+. ...    .......++.++.+|++|.+++.++++     
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999986543 211    111122468899999999998877664     


Q ss_pred             --CCCEEEEccccCcccc----ccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccce-eeeecCCCCC
Q 035965           79 --GCDGVFHVAASMEFDI----NVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVS-TITAKDSSGE  149 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~----~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~-~~~~~~~~~~  149 (348)
                        ++|++||+||......    ....+.++|  +..+++|+.++..+++++...  ....++|+++|.. ...+.+    
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~--~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~----  156 (264)
T d1spxa_          83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESY--DATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATP----  156 (264)
T ss_dssp             HSCCCEEEECCC-------------CCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCT----
T ss_pred             hCCCCEeecccccccCCccccccccCCHHHH--HHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCC----
Confidence              6899999999754322    112244555  578999999999998887642  1124666666643 222111    


Q ss_pred             CCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCC------CCchHHH
Q 035965          150 WRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSS------VPSSIQV  220 (348)
Q Consensus       150 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~------~~~~~~~  220 (348)
                                           ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+.....      .......
T Consensus       157 ---------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~  215 (264)
T d1spxa_         157 ---------------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYST  215 (264)
T ss_dssp             ---------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHH
T ss_pred             ---------------------CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHH
Confidence                                 2246999999999999998876   479999999999876532211      0000000


Q ss_pred             HHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC---CCCceEEE
Q 035965          221 LLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND---RAQGQYIC  272 (348)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~---~~~~~y~~  272 (348)
                      .....    ..+| .++         +...+|+|+++++++..+   ...|+.+.
T Consensus       216 ~~~~~----~~~P-l~R---------~g~pedvA~~v~fL~S~~~s~~itG~~i~  256 (264)
T d1spxa_         216 MATMK----ECVP-AGV---------MGQPQDIAEVIAFLADRKTSSYIIGHQLV  256 (264)
T ss_dssp             HHHHH----HHCT-TSS---------CBCHHHHHHHHHHHHCHHHHTTCCSCEEE
T ss_pred             HHHHH----hcCC-CCC---------CcCHHHHHHHHHHHhCCcccCCccCceEE
Confidence            10110    1122 334         458999999999998633   24565433

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.83  E-value=8.9e-20  Score=153.08  Aligned_cols=212  Identities=17%  Similarity=0.148  Sum_probs=150.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCc-chHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVE-GSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~d~Vih~a   87 (348)
                      +++|++|||||++.||+++++.|+++|++|++++|+.+...  .     ...+++.+|+++. +.+.+.+.++|++||+|
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~--~-----~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnA   74 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK--R-----SGHRYVVCDLRKDLDLLFEKVKEVDILVLNA   74 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH--H-----TCSEEEECCTTTCHHHHHHHSCCCSEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH--h-----cCCcEEEcchHHHHHHHHHHhCCCcEEEecc
Confidence            56899999999999999999999999999999999764321  1     1456788999874 33444556799999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIH  163 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~  163 (348)
                      |........+-+.++|  ...+++|+.++..+++++..    .+ ..++|++||.....+..                  
T Consensus        75 G~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~~------------------  133 (234)
T d1o5ia_          75 GGPKAGFFDELTNEDF--KEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIE------------------  133 (234)
T ss_dssp             CCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT------------------
T ss_pred             cccCCcchhhhhhHHH--HHHhhhhhhhhhhhhhcccccccccc-ccccccccccccccccc------------------
Confidence            9765555445555666  57899999998888887653    33 56899999976432211                  


Q ss_pred             hhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccccccccc
Q 035965          164 HVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSN  240 (348)
Q Consensus       164 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (348)
                             ....|+.+|.+.+.+.+.++.+   +||++..+.||.+-.+......+..   ....+..   .++ .++   
T Consensus       134 -------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~---~~~~~~~---~~p-l~R---  196 (234)
T d1o5ia_         134 -------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEE---KKKQVES---QIP-MRR---  196 (234)
T ss_dssp             -------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHH---HHHHHHT---TST-TSS---
T ss_pred             -------ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHH---HHHHHHh---cCC-CCC---
Confidence                   3357999999999999998876   4799999999988665422111110   1111111   122 334   


Q ss_pred             CCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          241 RMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       241 ~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                            +...+|+|+++.+++....  ..|+.+
T Consensus       197 ------~~~pediA~~v~fL~S~~s~~itG~~i  223 (234)
T d1o5ia_         197 ------MAKPEEIASVVAFLCSEKASYLTGQTI  223 (234)
T ss_dssp             ------CBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             ------CcCHHHHHHHHHHHhChhhcCCcCcEE
Confidence                  5589999999999986433  356543

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=7.7e-20  Score=154.43  Aligned_cols=224  Identities=18%  Similarity=0.150  Sum_probs=157.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhh---cCCCEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAV---MGCDGVF   84 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~~~d~Vi   84 (348)
                      .++|++|||||++.||+++++.|+++|++|++++|++.+. ...+    ...++...+|+.+.+.+....   ..+|++|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~id~lV   79 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----YPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----STTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----ccCCceeeeeccccccccccccccccceeEE
Confidence            5679999999999999999999999999999999987654 3332    246888999998876665544   3789999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEeccceeeeecCCCCCCCCcccCCCCCC
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTP  161 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~  161 (348)
                      |+||........+.+.++|  ...+++|+.++..+++.+...   ....++|++||..... .+.               
T Consensus        80 n~ag~~~~~~~~~~~~~~~--~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~-~~~---------------  141 (245)
T d2ag5a1          80 NVAGFVHHGTVLDCEEKDW--DFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV-KGV---------------  141 (245)
T ss_dssp             ECCCCCCCBCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT-BCC---------------
T ss_pred             ecccccCCCChhhCCHHHH--HHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc-CCc---------------
Confidence            9999877665555666666  688999999999999877642   2256899999865210 001               


Q ss_pred             cchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCC--CCchHHHHHhhhcCCCCcccccc
Q 035965          162 IHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSS--VPSSIQVLLSPITGDSKFFSILS  236 (348)
Q Consensus       162 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  236 (348)
                              .....|+.+|.+.+.+++.++.+   +||++..+.||.|-.|.....  ...........+..   ..+ .+
T Consensus       142 --------~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~---~~p-l~  209 (245)
T d2ag5a1         142 --------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLK---RQK-TG  209 (245)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHH---TCT-TS
T ss_pred             --------cchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHh---cCC-CC
Confidence                    13457999999999999999877   479999999999876532110  00000001111111   111 22


Q ss_pred             ccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEEecc
Q 035965          237 SVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYICCVK  275 (348)
Q Consensus       237 ~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~~~~  275 (348)
                      +         +...+|+++++.+++....  ..|..+..+.
T Consensus       210 R---------~~~pedva~~v~fL~s~~s~~iTG~~i~VDG  241 (245)
T d2ag5a1         210 R---------FATAEEIAMLCVYLASDESAYVTGNPVIIDG  241 (245)
T ss_dssp             S---------CEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             C---------CcCHHHHHHHHHHHhChhhCCCcCceEEeCC
Confidence            3         6689999999999997543  3665544333

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.83  E-value=6.3e-20  Score=157.56  Aligned_cols=226  Identities=20%  Similarity=0.192  Sum_probs=151.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc----ccCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS----KWTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~----~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .++|++|||||++.||+++++.|+++|++|++++|+..+. ....    ......++.++.+|++|++++.++++     
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999986543 2111    11122468899999999998877664     


Q ss_pred             --CCCEEEEccccCcccccc----ccccccchhhhhhhhhHHHHHHHHHHHhhc---CCcceEEEecc-ceeeeecCCCC
Q 035965           79 --GCDGVFHVAASMEFDINV----KDNIETYVQSTVINPAIQSTLNLLKACLKS---ESVKRVVLTSS-VSTITAKDSSG  148 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~----~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~v~~SS-~~~~~~~~~~~  148 (348)
                        ++|++||+||........    +...++|  ...+++|+.++..+++++...   + ...+|+++| .+...+.+   
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~--~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~Ss~a~~~~~~---  156 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIY--HKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQAQP---  156 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSSCCC---
T ss_pred             hCCceEEEeCCcccCcccccccchhccHHHH--HHHHHhhhhHHHHHHHhhccccccc-CCccccccchhccccCCC---
Confidence              689999999986543321    2223334  578899999999999877643   2 245555555 33222111   


Q ss_pred             CCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCC-C-chHHHHHh
Q 035965          149 EWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSV-P-SSIQVLLS  223 (348)
Q Consensus       149 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~-~-~~~~~~~~  223 (348)
                                            ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+...... + ........
T Consensus       157 ----------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~  214 (272)
T d1xkqa_         157 ----------------------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYN  214 (272)
T ss_dssp             ----------------------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHH
T ss_pred             ----------------------CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHH
Confidence                                  2346999999999999998876   5899999999998655321100 0 01111111


Q ss_pred             hhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC---CCCceEEE
Q 035965          224 PITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND---RAQGQYIC  272 (348)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~---~~~~~y~~  272 (348)
                      ........+| .++         +...+|+|+++++++...   ...|+.+.
T Consensus       215 ~~~~~~~~~P-lgR---------~g~pediA~~v~fL~S~~as~~iTG~~i~  256 (272)
T d1xkqa_         215 FMASHKECIP-IGA---------AGKPEHIANIILFLADRNLSFYILGQSIV  256 (272)
T ss_dssp             HHHHCTTTCT-TSS---------CBCHHHHHHHHHHHHCHHHHTTCCSCEEE
T ss_pred             HHHHHhcCCC-CCC---------CcCHHHHHHHHHHHhCcchhCCccCeEEE
Confidence            1111122233 344         448999999999998632   24565433

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.83  E-value=1.8e-19  Score=154.90  Aligned_cols=229  Identities=19%  Similarity=0.131  Sum_probs=156.9

Q ss_pred             CcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccc-ccCCCCCeEEEEccCCCcchHHHhhc---
Q 035965            5 EESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM---   78 (348)
Q Consensus         5 ~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~---   78 (348)
                      .+.++++|++|||||++.||.++++.|+++|++|++++|+..+.  .... ......++.++.+|++|++++.++++   
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            34557889999999999999999999999999999999875432  1111 11233568899999999988877664   


Q ss_pred             ----CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 ----GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 ----~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                          .+|++||+++........+...++|  ...+++|+.++..+++++... ....++++++|........        
T Consensus        92 ~~~g~idilV~nag~~~~~~~~~~~~~~~--~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~--------  161 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEF--DRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV--------  161 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC--------
T ss_pred             HHhCCCCccccccccchhhhhhhhhhhHH--HHHhhhccceeeeeccccccccccccccccccccccccccc--------
Confidence                5899999999876665555555555  578999999999999988753 2235778887754221110        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCC--------CCCCchHHHHH
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLT--------SSVPSSIQVLL  222 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~--------~~~~~~~~~~~  222 (348)
                                      .....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+...        ...........
T Consensus       162 ----------------~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  225 (272)
T d1g0oa_         162 ----------------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVD  225 (272)
T ss_dssp             ----------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHH
T ss_pred             ----------------cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHH
Confidence                            13357999999999999998876   5899999999998654110        00000000000


Q ss_pred             hhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          223 SPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                      .....  ..++ .++         +...+|+|.++.+++....  ..|..+
T Consensus       226 ~~~~~--~~~P-lgR---------~~~peevA~~v~fL~s~~s~~itG~~i  264 (272)
T d1g0oa_         226 EYAAV--QWSP-LRR---------VGLPIDIARVVCFLASNDGGWVTGKVI  264 (272)
T ss_dssp             HHHHH--HSCT-TCS---------CBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHH--ccCC-CCC---------CcCHHHHHHHHHHHhCchhcCccCceE
Confidence            00000  0111 233         5689999999999997543  356543

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.83  E-value=4.5e-20  Score=157.50  Aligned_cols=231  Identities=17%  Similarity=0.147  Sum_probs=158.2

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-cc-CCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KW-TRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      +..++|++|||||++.||+++++.|+++|++|++++|+..+. .... +. ....++.++.+|++|++++.++++     
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999999987654 2211 11 123468899999999998877764     


Q ss_pred             --CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 --GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                        .+|++||+|+........+.+.++|  +..+++|+.++..+.+++..    .+....++..||.........      
T Consensus        85 ~g~iDilVnnAg~~~~~~~~~~~~~~~--~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~------  156 (260)
T d1h5qa_          85 LGPISGLIANAGVSVVKPATELTHEDF--AFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS------  156 (260)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE------
T ss_pred             hCCCcEecccccccccCCHHHhccccc--cccccccccchhhhhhhhcccccccccceEEEEeecccccccccc------
Confidence              5899999999876655555556666  58899999999988876643    232456777777553211111      


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                      ...   .         .+....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+......+.    .......  
T Consensus       157 ~~~---~---------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~----~~~~~~~--  218 (260)
T d1h5qa_         157 SLN---G---------SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKK----IRDHQAS--  218 (260)
T ss_dssp             ETT---E---------ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHH----HHHHHHH--
T ss_pred             ccc---c---------CccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHH----HHHHHHh--
Confidence            000   0         013457999999999999998876   579999999999865532221111    1111111  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY-ICCV  274 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y-~~~~  274 (348)
                       .++ .++         +...+|+|+++++++....  ..|+. .+.+
T Consensus       219 -~~p-l~R---------~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  255 (260)
T d1h5qa_         219 -NIP-LNR---------FAQPEEMTGQAILLLSDHATYMTGGEYFIDG  255 (260)
T ss_dssp             -TCT-TSS---------CBCGGGGHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             -cCC-CCC---------CcCHHHHHHHHHHHhcchhCCCcCceEEECC
Confidence             122 334         4589999999999986433  35654 4433

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=9.1e-20  Score=155.09  Aligned_cols=215  Identities=16%  Similarity=0.174  Sum_probs=150.4

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc---cCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK---WTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .++|.+|||||++.||.++++.|+++|++|++++|+..+. .....   .....++.++.+|++|++++.++++      
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999987644 22211   1122467889999999998877654      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cC-CcceEEEeccceeeeecCCCCCCCC
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SE-SVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~-~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                       ++|++||+|+........+.+.++|  ...+++|+.+...+.+.+.+    .+ ...++|++||.+.....+.      
T Consensus        88 g~iD~lVnnAg~~~~~~~~~~~~~~~--~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~------  159 (257)
T d1xg5a_          88 SGVDICINNAGLARPDTLLSGSTSGW--KDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL------  159 (257)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC------
T ss_pred             CCCCEEEecccccCCCccccccHHHH--HhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC------
Confidence             6899999999876665555555666  58899999999888777643    22 2479999999874322222      


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITG  227 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~  227 (348)
                                       .....|+.+|...+.+.+.++.+     +++++..+.|+.+-.+............+.     
T Consensus       160 -----------------~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~-----  217 (257)
T d1xg5a_         160 -----------------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAA-----  217 (257)
T ss_dssp             -----------------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHH-----
T ss_pred             -----------------cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHH-----
Confidence                             02246999999999999988754     579999999987643311000000000000     


Q ss_pred             CCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC
Q 035965          228 DSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR  265 (348)
Q Consensus       228 ~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~  265 (348)
                        ..++ .+         -++..+|+|+++++++..+.
T Consensus       218 --~~~~-~~---------r~~~pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         218 --ATYE-QM---------KCLKPEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             --HHHC-------------CBCHHHHHHHHHHHHHSCT
T ss_pred             --hcCC-CC---------CCcCHHHHHHHHHHHhCChh
Confidence              0011 11         26789999999999987653

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.82  E-value=2.1e-19  Score=153.21  Aligned_cols=227  Identities=19%  Similarity=0.122  Sum_probs=154.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccc-cCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSK-WTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      ++.+|++|||||+|.||.++++.|+++|++|++..++..+.  ..... .....++.++.+|++|.+++.++++      
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            56789999999999999999999999999999887755432  21111 1223478899999999988877664      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEecccee-eeecCCCCCCCCccc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVST-ITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~-~~~~~~~~~~~~~~~  155 (348)
                       .+|++||+||..........+.++|  +..+++|+.+...+++.+... ....+++.++|... ..+.+          
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~----------  150 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELF--DKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP----------  150 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC----------
T ss_pred             CCCcEEEeccccccccccccchHHHH--HHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCC----------
Confidence             5899999999876665555555555  588999999999999888753 11346666665432 11111          


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCC---------CCCCCchHHHHHh
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFL---------TSSVPSSIQVLLS  223 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~---------~~~~~~~~~~~~~  223 (348)
                                     ....|+.+|.+.+.+.+.++.+   +||++..+.||.+-.+..         ..........+..
T Consensus       151 ---------------~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  215 (259)
T d1ja9a_         151 ---------------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDE  215 (259)
T ss_dssp             ---------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHH
T ss_pred             ---------------CchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHH
Confidence                           2346999999999999998876   479999999999864310         0001111111111


Q ss_pred             hhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 035965          224 PITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQ-YICCV  274 (348)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~-y~~~~  274 (348)
                      .....   .+ .++         +...+|+++++++++....  ..|. ..+.+
T Consensus       216 ~~~~~---~p-l~R---------~g~p~eVa~~v~fL~S~~a~~itG~~i~vDG  256 (259)
T d1ja9a_         216 GLANM---NP-LKR---------IGYPADIGRAVSALCQEESEWINGQVIKLTG  256 (259)
T ss_dssp             HHHHT---ST-TSS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhC---CC-CCC---------CcCHHHHHHHHHHHhCchhcCCcCceEEeCC
Confidence            11111   11 222         6689999999999998654  3554 44443

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2e-20  Score=157.61  Aligned_cols=202  Identities=12%  Similarity=0.039  Sum_probs=152.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      ...+|.++||||++.||.+++++|+++|++|++++|+..+. .... ......++.++.+|++|.+++.++++       
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999987654 2221 12234578899999999998877664       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      .+|++||+|+........+.+.++|  +..+++|+.++..+++++..    .+ ..+||++||.....+.+         
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~~---------  151 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQI--EKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVP---------  151 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHH--HHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHH---------
T ss_pred             CCceeEeeccccccccccccchhHH--HhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCCC---------
Confidence            5899999999877766555555555  58899999999998887653    34 57899999987543221         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh------CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCC
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE------NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGD  228 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~  228 (348)
                                      ....|+.||.+.+.+.+.++.+      .|+++..+.||.|-.+.....               
T Consensus       152 ----------------~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~---------------  200 (244)
T d1yb1a_         152 ----------------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP---------------  200 (244)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT---------------
T ss_pred             ----------------CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc---------------
Confidence                            2246999999999999998865      479999999998755432110               


Q ss_pred             CCccccccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          229 SKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       229 ~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                      ..     ....       .+..+|+|+.+...+...
T Consensus       201 ~~-----~~~~-------~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         201 ST-----SLGP-------TLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HH-----HHCC-------CCCHHHHHHHHHHHHHTT
T ss_pred             Cc-----cccC-------CCCHHHHHHHHHHHHhcC
Confidence            00     0111       457899999999887764

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.82  E-value=1.1e-19  Score=154.85  Aligned_cols=224  Identities=14%  Similarity=0.083  Sum_probs=150.8

Q ss_pred             CCCCCeEEEeCCCC--hhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANG--YIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatG--fiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      .+++|++|||||+|  .||.+++++|+++|++|++.+|+.... .............++.+|++|.+++.++++      
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence            56789999999998  799999999999999999988875432 222222233467789999999988877654      


Q ss_pred             -CCCEEEEccccCcccc----ccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 -GCDGVFHVAASMEFDI----NVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                       ++|++||+|+......    ..+...++|  ...+++|+.++..+++++... ....++|++||.....+.+       
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~--~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~-------  155 (256)
T d1ulua_          85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDW--LLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP-------  155 (256)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT-------
T ss_pred             CCceEEEeccccccccccccchhhhhhhhh--hHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCC-------
Confidence             5899999998754322    112222333  467899999999999887643 1236899999977533221       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        ....|+.+|.+.+.+.+.++.+   +||++..+.|+.|..+....... .-........   
T Consensus       156 ------------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~-~~~~~~~~~~---  213 (256)
T d1ulua_         156 ------------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG-FTKMYDRVAQ---  213 (256)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------CHHHHHHHHH---
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhh-hHHHHHHHHh---
Confidence                              3357999999999999999877   47999999999987765432111 0111111111   


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEEe
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYICC  273 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~~  273 (348)
                       ..+ .++         +...+|+|+++.+++....  ..|+.+..
T Consensus       214 -~~p-l~R---------~~~pedvA~~v~fL~S~~s~~itG~~i~V  248 (256)
T d1ulua_         214 -TAP-LRR---------NITQEEVGNLGLFLLSPLASGITGEVVYV  248 (256)
T ss_dssp             -HST-TSS---------CCCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             -cCC-CCC---------CcCHHHHHHHHHHHhCchhCCccCCeEEE
Confidence             112 333         4589999999999987533  35654433

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.82  E-value=6.4e-20  Score=157.80  Aligned_cols=222  Identities=16%  Similarity=0.204  Sum_probs=150.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      .+++|++|||||++.||+++++.|+++|++|++++|+.++. .....  ...++.++.+|+++.+++.++++       .
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD--HGDNVLGIVGDVRSLEDQKQAASRCVARFGK   79 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--HGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--cCCCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence            35679999999999999999999999999999999987654 22221  12468899999999988877654       6


Q ss_pred             CCEEEEccccCcccccc-----ccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCC
Q 035965           80 CDGVFHVAASMEFDINV-----KDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~-----~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      +|++||+||........     +...++|  +..+++|+.++..+++++...  ....++|++||.....+.+       
T Consensus        80 idilvnnAG~~~~~~~~~~~~~e~~~~~~--~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~-------  150 (276)
T d1bdba_          80 IDTLIPNAGIWDYSTALVDLPEESLDAAF--DEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNG-------  150 (276)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTS-------
T ss_pred             cccccccccccCCCCccccccccchhhhh--hHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCC-------
Confidence            89999999975443221     1111224  578999999999988877532  1126789888875432211       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC--CCcEEEEecCccccCCCCCCCCchH------HHHHhh
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN--KIDLVSVITTTVAGPFLTSSVPSSI------QVLLSP  224 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~~~------~~~~~~  224 (348)
                                        ....|+.+|.+.+.+.+.++.+.  +|++..+.||.|-.+...+......      ..+...
T Consensus       151 ------------------~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  212 (276)
T d1bdba_         151 ------------------GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADM  212 (276)
T ss_dssp             ------------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHH
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHH
Confidence                              23469999999999999988773  4999999999987653322100000      001111


Q ss_pred             hcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcC---CCCCceEE
Q 035965          225 ITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEN---DRAQGQYI  271 (348)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~---~~~~~~y~  271 (348)
                      +..   .+| .++         +...+|+|.++++++..   ....|..+
T Consensus       213 ~~~---~~P-lgR---------~g~peeva~~v~fL~S~~~a~~itG~~i  249 (276)
T d1bdba_         213 LKS---VLP-IGR---------MPEVEEYTGAYVFFATRGDAAPATGALL  249 (276)
T ss_dssp             HTT---TCT-TSS---------CCCGGGGSHHHHHHHCHHHHTTCSSCEE
T ss_pred             HHh---cCC-CCC---------CcCHHHHHHHHHHHcCCcccCCeeCcEE
Confidence            111   122 344         44789999999988752   23456543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4.2e-20  Score=157.07  Aligned_cols=220  Identities=16%  Similarity=0.074  Sum_probs=147.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-ccC--CCCCeEEEEccCCCcchHHHhhc-------
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KWT--RSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      .+|++|||||++.||.++++.|+++|++|++++|+..+. .... +..  ...++.++.+|++|.++++++++       
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            368999999999999999999999999999999987543 1111 111  12468899999999998877664       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----c--CCcceEEEeccceeeeecCCCCCCCC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----S--ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~--~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      ++|++||+|+......         . +..+++|+.++..+.+++..    .  +...+||++||.....+.+       
T Consensus        82 ~iDilVnnAg~~~~~~---------~-~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~-------  144 (254)
T d2gdza1          82 RLDILVNNAGVNNEKN---------W-EKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA-------  144 (254)
T ss_dssp             CCCEEEECCCCCCSSS---------H-HHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-------
T ss_pred             CcCeeccccccccccc---------c-hheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCC-------
Confidence            6899999999765433         3 47889999888877776653    2  2236799999987543222       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHH--HHH---hCCCcEEEEecCccccCCCCCCCCchH-HHHHhhhc
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFK--FAN---ENKIDLVSVITTTVAGPFLTSSVPSSI-QVLLSPIT  226 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~--~~~---~~~~~~~~lR~~~v~G~~~~~~~~~~~-~~~~~~~~  226 (348)
                                        ....|+.||.+.+.+.+.  ++.   .+|+++..+.||.|-.+.......... ........
T Consensus       145 ------------------~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  206 (254)
T d2gdza1         145 ------------------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKD  206 (254)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHH
T ss_pred             ------------------CccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHH
Confidence                              234799999999988875  232   368999999999885542110000000 00000000


Q ss_pred             CCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceE-EEec
Q 035965          227 GDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQY-ICCV  274 (348)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y-~~~~  274 (348)
                      .-...++ .++         +...+|+|+++++++.+....|.. .+.+
T Consensus       207 ~~~~~~p-~~r---------~~~pedvA~~v~fL~s~~~itG~~i~VdG  245 (254)
T d2gdza1         207 HIKDMIK-YYG---------ILDPPLIANGLITLIEDDALNGAIMKITT  245 (254)
T ss_dssp             HHHHHHH-HHC---------CBCHHHHHHHHHHHHHCTTCSSCEEEEET
T ss_pred             HHHhcCC-CCC---------CcCHHHHHHHHHHHHcCCCCCCCEEEECC
Confidence            0000111 222         458899999999999876666654 4543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.80  E-value=6.3e-20  Score=155.79  Aligned_cols=213  Identities=14%  Similarity=0.053  Sum_probs=147.3

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------CCCEEE
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------GCDGVF   84 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vi   84 (348)
                      ++|||||++.||..+++.|+++|++|++.+|+..+. .....     ...+..+|++|.+++.++++       ++|++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~-----~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLV   76 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF-----AETYPQLKPMSEQEPAELIEAVTSAYGQVDVLV   76 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH-----HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh-----hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            689999999999999999999999999999976654 33222     12344678888777766553       689999


Q ss_pred             EccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           85 HVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        85 h~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      |||+.... ....+.+.++|  ...+++|+.++..+++++..    .+ ..++|++||.....+.+              
T Consensus        77 nNAg~~~~~~~~~~~~~e~~--~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~~--------------  139 (252)
T d1zmta1          77 SNDIFAPEFQPIDKYAVEDY--RGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWK--------------  139 (252)
T ss_dssp             EECCCCCCCCCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCT--------------
T ss_pred             ECCcCCCCCCChhhCCHHHH--HHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccccccc--------------
Confidence            99986433 33334445556  57899999999988887653    33 57999999986433221              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchH----HHHHhhhcCCCCcc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSI----QVLLSPITGDSKFF  232 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~----~~~~~~~~~~~~~~  232 (348)
                                 ....|+.+|.+.+.+.+.++.+   ++|++..+.||.|-.+..........    ......+.   ..+
T Consensus       140 -----------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~---~~~  205 (252)
T d1zmta1         140 -----------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVK---KVT  205 (252)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHH---HHS
T ss_pred             -----------cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHH---hcC
Confidence                       2247999999999999999877   47999999999997765432211000    00011110   111


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYI  271 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~  271 (348)
                      + .++         +...+|+|+++++++....  ..|+.+
T Consensus       206 p-l~R---------~g~pedvA~~v~fL~S~~s~~iTG~~i  236 (252)
T d1zmta1         206 A-LQR---------LGTQKELGELVAFLASGSCDYLTGQVF  236 (252)
T ss_dssp             S-SSS---------CBCHHHHHHHHHHHHTTSCGGGTTCEE
T ss_pred             C-CCC---------CcCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            2 344         4589999999999996543  355543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.80  E-value=4.3e-19  Score=150.40  Aligned_cols=174  Identities=19%  Similarity=0.199  Sum_probs=129.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHH---CCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc--------
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLE---RGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--------   78 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~---~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------   78 (348)
                      ||+||||||++.||.+++++|++   +|++|++++|+.++. ....+.....++.++.+|++|.+++.++++        
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            68999999999999999999974   699999999988766 433333334689999999999988766543        


Q ss_pred             -CCCEEEEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhc--------------CCcceEEEeccceeee
Q 035965           79 -GCDGVFHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKS--------------ESVKRVVLTSSVSTIT  142 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--------------~~~~~~v~~SS~~~~~  142 (348)
                       .+|++||+||...... ..+.+.++|  ...+++|+.++..+++++...              ....++|++||.....
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQEL--LDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             CCcceEEeeccccccCcccccCCHHHH--HHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence             4899999999755433 223334444  578999999999888876421              0146899999965321


Q ss_pred             ecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccC
Q 035965          143 AKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGP  208 (348)
Q Consensus       143 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~  208 (348)
                      ....                      .+....|+.||.+...+.+.++.+   .++++..+.||.|--+
T Consensus       160 ~~~~----------------------~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         160 QGNT----------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             TTCC----------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             CCCC----------------------CCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            1100                      012347999999999999888765   4799999999988654

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.79  E-value=6.3e-19  Score=153.06  Aligned_cols=172  Identities=18%  Similarity=0.085  Sum_probs=131.1

Q ss_pred             cCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccc-------ccccc-CCCCCeEEEEccCCCcchHHHhh
Q 035965            6 ESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ-------IFSKW-TRSDRLRLFQADLQVEGSFDKAV   77 (348)
Q Consensus         6 ~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~   77 (348)
                      ++..++|++|||||++.||+++++.|+++|++|++.+|+.+...       ..... ..........+|+.|.++.++++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v   81 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLV   81 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHH
Confidence            45667899999999999999999999999999999988654210       00000 00113345678888887766554


Q ss_pred             c-------CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCC
Q 035965           78 M-------GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDS  146 (348)
Q Consensus        78 ~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~  146 (348)
                      +       ++|++|||||........+.+.++|  +..+++|+.++..+++++..    .+ ..+||++||.....+.+.
T Consensus        82 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~--~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~~  158 (302)
T d1gz6a_          82 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDW--DIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFG  158 (302)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHH--hhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCCC
Confidence            3       6899999999877666556666666  68999999999999988653    34 579999999876544322


Q ss_pred             CCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCcc
Q 035965          147 SGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTV  205 (348)
Q Consensus       147 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v  205 (348)
                                               ...|+.+|.+.+.+.+.++.+   +||++..+.|+.+
T Consensus       159 -------------------------~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~  195 (302)
T d1gz6a_         159 -------------------------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  195 (302)
T ss_dssp             -------------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             -------------------------cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCC
Confidence                                     247999999999999999877   4799999999865

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.78  E-value=2e-18  Score=147.31  Aligned_cols=207  Identities=17%  Similarity=0.112  Sum_probs=148.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc----cc-ccccCCCCCeEEEEccCCCcchHHHhhc------C
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL----QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM------G   79 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~----~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~   79 (348)
                      .+||||||+|.||.+++++|+++|+ +|+++.|+..+.    .. ..+.....++.++.+|++|.+++.++++      .
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~   89 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP   89 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence            5899999999999999999999998 588888864322    11 1112233578999999999999888765      3


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      +|.|||+++........+.+.++|  ...+++|+.++.++.+++...+ ..+||++||.....+...             
T Consensus        90 i~~vv~~ag~~~~~~~~~~~~~~~--~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~~~-------------  153 (259)
T d2fr1a1          90 LSAVFHAAATLDDGTVDTLTGERI--ERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPG-------------  153 (259)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHH--HHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTT-------------
T ss_pred             ccccccccccccccccccccHHHH--HHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCCcc-------------
Confidence            789999999876655444444444  5679999999999999887776 789999999886654433             


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhCCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANENKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVS  239 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (348)
                                  ...|+.+|...+.+.+.+.. .|++++.+.||.+.+++....   .   +...+..       .| . 
T Consensus       154 ------------~~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~~~~---~---~~~~~~~-------~G-~-  205 (259)
T d2fr1a1         154 ------------LGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEG---P---VADRFRR-------HG-V-  205 (259)
T ss_dssp             ------------CTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC------------------CTT-------TT-E-
T ss_pred             ------------cHHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCccccc---h---HHHHHHh-------cC-C-
Confidence                        23599999999998877755 589999999999887653321   0   1011000       01 1 


Q ss_pred             cCCCCcceeeHHHHHHHHHHhhcCCCCCc
Q 035965          240 NRMGSIALVHIEDICNAHIFLMENDRAQG  268 (348)
Q Consensus       240 ~~~~~r~~i~v~D~a~~~~~~~~~~~~~~  268 (348)
                            ..+..+++++++..++.++....
T Consensus       206 ------~~~~~~~~~~~l~~~l~~~~~~~  228 (259)
T d2fr1a1         206 ------IEMPPETACRALQNALDRAEVCP  228 (259)
T ss_dssp             ------ECBCHHHHHHHHHHHHHTTCSSC
T ss_pred             ------CCCCHHHHHHHHHHHHhCCCceE
Confidence                  15679999999999998865443

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.78  E-value=3.7e-18  Score=148.40  Aligned_cols=225  Identities=13%  Similarity=0.044  Sum_probs=149.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc-cc-CCCCCeEEEEccCCCcchHHHhhc------
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS-KW-TRSDRLRLFQADLQVEGSFDKAVM------   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~------   78 (348)
                      ..++|++|||||+|.||++++++|+++|++|++++|+..+. .... +. .....+.++.+|++|.+++.++++      
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~  101 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA  101 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence            34579999999999999999999999999999999987543 1111 11 123467889999999988876553      


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       ++|++||+|+............++|  ...+.+|..+...+...+..    ......++.+||.......+        
T Consensus       102 g~iDilvnnAg~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~--------  171 (294)
T d1w6ua_         102 GHPNIVINNAAGNFISPTERLSPNAW--KTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG--------  171 (294)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT--------
T ss_pred             cccchhhhhhhhccccccccchhhhh--hhheeeecccchhhhhhhhcccccccccccccccccchhhhccc--------
Confidence             6899999999876655444444444  46677788777776655432    22245677777765332211        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCC
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSK  230 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  230 (348)
                                       ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+.........-........    
T Consensus       172 -----------------~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~----  230 (294)
T d1w6ua_         172 -----------------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIG----  230 (294)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHT----
T ss_pred             -----------------ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhh----
Confidence                             2346999999999999999876   4799999999999776433211111111111111    


Q ss_pred             ccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE-EEe
Q 035965          231 FFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY-ICC  273 (348)
Q Consensus       231 ~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y-~~~  273 (348)
                      .++ .++         +...+|+|+++.+++....  ..|.. .+.
T Consensus       231 ~~p-l~R---------~~~pediA~~v~fL~sd~s~~itG~~i~vD  266 (294)
T d1w6ua_         231 RIP-CGR---------LGTVEELANLAAFLCSDYASWINGAVIKFD  266 (294)
T ss_dssp             TCT-TSS---------CBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             cCC-CCC---------CCCHHHHHHHHHHHhCchhcCCCCcEEEEC
Confidence            112 334         4589999999999996533  45554 443

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.2e-19  Score=153.99  Aligned_cols=224  Identities=18%  Similarity=0.135  Sum_probs=151.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEE---cCCCcc-ccc----cccCCCCCeEEEEccCCCcchHHHhhc----
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATV---RDPGKL-QIF----SKWTRSDRLRLFQADLQVEGSFDKAVM----   78 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~---r~~~~~-~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   78 (348)
                      .|.||||||++.||.++++.|+++|.+|+.+.   |+.... .+.    .......++.++.+|++|.+++.++++    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            35678999999999999999999998765554   433222 111    112234578999999999999887764    


Q ss_pred             -CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhh----cCCcceEEEeccceeeeecCCCCCCCCc
Q 035965           79 -GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLK----SESVKRVVLTSSVSTITAKDSSGEWRPV  153 (348)
Q Consensus        79 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~~  153 (348)
                       .+|+++|+|+........+.+.++|  ...+++|+.|+.++++++..    .+ .+++|++||.....+.+        
T Consensus        82 g~idilvnnag~~~~~~~~~~~~e~~--~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~--------  150 (285)
T d1jtva_          82 GRVDVLVCNAGLGLLGPLEALGEDAV--ASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLP--------  150 (285)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCT--------
T ss_pred             cchhhhhhcccccccccccchhHhhh--hhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCC--------
Confidence             4899999999877666556656666  58899999999998887653    34 57999999987543222        


Q ss_pred             ccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHH-----------
Q 035965          154 VDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQ-----------  219 (348)
Q Consensus       154 ~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~-----------  219 (348)
                                       ....|+.||.+.+.+.+.++.+   +|+++..+.||.|-.+.........-.           
T Consensus       151 -----------------~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  213 (285)
T d1jtva_         151 -----------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFH  213 (285)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHH
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHH
Confidence                             2347999999999999998877   589999999999866533221110000           


Q ss_pred             HHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEEe
Q 035965          220 VLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYICC  273 (348)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~~  273 (348)
                      .+.+.... ...++          ..-....+|+|++++.+++.+.+.-.|..+
T Consensus       214 ~~~~~~~~-~~~~~----------~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g  256 (285)
T d1jtva_         214 RFYQYLAH-SKQVF----------REAAQNPEEVAEVFLTALRAPKPTLRYFTT  256 (285)
T ss_dssp             HHHHHHHH-HHHHH----------HHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred             HHHHHHHH-Hhhhh----------cccCCCHHHHHHHHHHHHhCCCCCeEEecH
Confidence            00000000 00000          011457899999999999887654456543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.75  E-value=2.3e-17  Score=139.80  Aligned_cols=177  Identities=21%  Similarity=0.183  Sum_probs=125.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      |++|+||||||++.||.+++++|+++|+  .|++.+|+..+. .+...  ...++.++.+|++|.+++.++++       
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh--hCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            4468999999999999999999999995  688889987655 33322  23578999999999988766543       


Q ss_pred             --CCCEEEEccccCcc-ccccccccccchhhhhhhhhHHHHHHHHHHHhhc----C----------CcceEEEeccceee
Q 035965           79 --GCDGVFHVAASMEF-DINVKDNIETYVQSTVINPAIQSTLNLLKACLKS----E----------SVKRVVLTSSVSTI  141 (348)
Q Consensus        79 --~~d~Vih~a~~~~~-~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~----------~~~~~v~~SS~~~~  141 (348)
                        ++|++||+||.... ....+.+.++|  ...+++|+.|+..+++.+...    +          ...+++.+|+....
T Consensus        79 ~~~idilinnAG~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~  156 (250)
T d1yo6a1          79 SDGLSLLINNAGVLLSYGTNTEPNRAVI--AEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHH--HHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             CCCeEEEEEcCcccCCCCccccCCHHHH--HHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence              38999999997544 22223334444  578999999999998876421    1          13467777775432


Q ss_pred             eecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCcccc
Q 035965          142 TAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAG  207 (348)
Q Consensus       142 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G  207 (348)
                      .....        ....          ..+...|+.||.+...+.+.++++   .|+++..+.||.|--
T Consensus       157 ~~~~~--------~~~~----------~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T  207 (250)
T d1yo6a1         157 ITDNT--------SGSA----------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQT  207 (250)
T ss_dssp             STTCC--------STTS----------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--
T ss_pred             ccCCc--------cccc----------chhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCC
Confidence            21111        0000          014456999999999999998876   479999999998743

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.8e-17  Score=139.12  Aligned_cols=216  Identities=15%  Similarity=0.124  Sum_probs=147.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +.++|.+|||||++.||.+++++|+++|++|++++|+..+. ...+.  ..........|+.+.+.+.....       .
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK--LGNNCVFAPADVTSEKDVQTALALAKGKFGR   79 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHH--HCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH--hCCCccccccccccccccccccccccccccc
Confidence            46789999999999999999999999999999999987655 22221  12467788899998766554432       5


Q ss_pred             CCEEEEccccCccccc------cccccccchhhhhhhhhHHHHHHHHHHHhhc---------CCcceEEEeccceeeeec
Q 035965           80 CDGVFHVAASMEFDIN------VKDNIETYVQSTVINPAIQSTLNLLKACLKS---------ESVKRVVLTSSVSTITAK  144 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~------~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---------~~~~~~v~~SS~~~~~~~  144 (348)
                      .|.++++++.......      .....++|  ...+++|+.++.++.+++...         ....+||++||.....+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDF--QRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             ccccccccccccCCCcccccccccchHHHH--HHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence            7888888765433221      12222333  478999999999999987532         124589999998754332


Q ss_pred             CCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHH
Q 035965          145 DSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVL  221 (348)
Q Consensus       145 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~  221 (348)
                      +                         ....|+.+|.+.+.+.+.++.+   +|+++..+.||.+..+........    .
T Consensus       158 ~-------------------------~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~----~  208 (248)
T d2o23a1         158 V-------------------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK----V  208 (248)
T ss_dssp             T-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------
T ss_pred             C-------------------------CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHH----H
Confidence            1                         2357999999999999999877   479999999999876643321111    1


Q ss_pred             HhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCc
Q 035965          222 LSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQG  268 (348)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~  268 (348)
                      ...+.   ..++..++         +...+|+|+++.+++++....|
T Consensus       209 ~~~~~---~~~pl~~R---------~g~peevA~~v~fL~s~~~itG  243 (248)
T d2o23a1         209 CNFLA---SQVPFPSR---------LGDPAEYAHLVQAIIENPFLNG  243 (248)
T ss_dssp             -CHHH---HTCSSSCS---------CBCHHHHHHHHHHHHHCTTCCS
T ss_pred             HHHHH---hcCCCCCC---------CcCHHHHHHHHHHHHhCCCCCc
Confidence            11111   11222234         4489999999999988654444

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.75  E-value=2.2e-17  Score=138.60  Aligned_cols=195  Identities=12%  Similarity=0.115  Sum_probs=135.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHH-------hhc--CC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK-------AVM--GC   80 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-------~~~--~~   80 (348)
                      ++|+||||||+|.||.++++.|+++|++|.++++...+..        ........|..+.+....       .+.  ++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            3689999999999999999999999999999998664321        112233455544433322       122  48


Q ss_pred             CEEEEccccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           81 DGVFHVAASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        81 d~Vih~a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      |++||+||..... ...+...++|  +..+++|+.++.++.+++... ....++|++||.+...+.+             
T Consensus        73 D~lInnAG~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~-------------  137 (236)
T d1dhra_          73 DAILCVAGGWAGGNAKSKSLFKNC--DLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP-------------  137 (236)
T ss_dssp             EEEEECCCCCCCBCTTCTTHHHHH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-------------
T ss_pred             eEEEECCcccccccchhcCCHHHH--HHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCcc-------------
Confidence            9999999964332 2223334445  478999999999998887753 2247899999987543221             


Q ss_pred             CCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-----CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccc
Q 035965          159 QTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-----NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFS  233 (348)
Q Consensus       159 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (348)
                                  ....|+.||.+.+.+.+.++.+     .++++..+.|+.+..|.            .+.......   
T Consensus       138 ------------~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~------------~~~~~~~~~---  190 (236)
T d1dhra_         138 ------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM------------NRKSMPEAD---  190 (236)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH------------HHHHSTTSC---
T ss_pred             ------------CCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc------------chhhCccch---
Confidence                        2347999999999999999866     36999999999886542            111111110   


Q ss_pred             cccccccCCCCcceeeHHHHHHHHHHhhcCC
Q 035965          234 ILSSVSNRMGSIALVHIEDICNAHIFLMEND  264 (348)
Q Consensus       234 ~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~  264 (348)
                       .+         .|+..+|+++.+.+++...
T Consensus       191 -~~---------~~~~pe~va~~~~~l~s~~  211 (236)
T d1dhra_         191 -FS---------SWTPLEFLVETFHDWITGN  211 (236)
T ss_dssp             -GG---------GSEEHHHHHHHHHHHHTTT
T ss_pred             -hh---------cCCCHHHHHHHHHHHhCCC
Confidence             11         2778999999999988754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.7e-18  Score=147.69  Aligned_cols=192  Identities=19%  Similarity=0.029  Sum_probs=131.2

Q ss_pred             CCeE-EEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-cc-ccccCCCCCeEEEEccCCCcchHHHhhc-------C
Q 035965           11 SKTF-CVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QI-FSKWTRSDRLRLFQADLQVEGSFDKAVM-------G   79 (348)
Q Consensus        11 ~~~i-lVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   79 (348)
                      +|+| |||||++.||.+++++|+++ |++|++++|+.++. .. ..+.....++.++.+|++|.+++.++++       .
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            4555 89999999999999999986 89999999987654 21 1222234578999999999998876653       5


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccC--
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDE--  156 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E--  156 (348)
                      +|++|||||........+...++|  ...+++|+.|+..+++.+... ..-.++|++||.....+....    .+...  
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~----~~y~~~k  155 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQA--EVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSC----SPELQQK  155 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHH--HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTS----CHHHHHH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceecccccc----chhhhhh
Confidence            899999999876555444434444  468999999999999998753 223689999997654433220    01000  


Q ss_pred             ---CCCCC---------------cchhhccCCCcchhHhhHHHHHHHHHHHHHh-------CCCcEEEEecCccccC
Q 035965          157 ---SCQTP---------------IHHVWNKKASGWVYVLSKLLSEETAFKFANE-------NKIDLVSVITTTVAGP  208 (348)
Q Consensus       157 ---~~~~~---------------~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~~lR~~~v~G~  208 (348)
                         .....               .........+...|+.||.....+.+.++++       .++++..+.||.|--+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~  232 (275)
T d1wmaa1         156 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD  232 (275)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred             hcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCC
Confidence               00000               0000001124457999999988877665544       3799999999988544

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=4.1e-18  Score=145.24  Aligned_cols=174  Identities=18%  Similarity=0.127  Sum_probs=130.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHH---CCCeEEEEEcCCCcc-ccccc---cCCCCCeEEEEccCCCcchHHHhhc--
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLE---RGYIVHATVRDPGKL-QIFSK---WTRSDRLRLFQADLQVEGSFDKAVM--   78 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~---~g~~V~~~~r~~~~~-~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~--   78 (348)
                      .+++|.++||||++.||.+++++|++   +|++|++++|+..+. .....   .....++.++.+|++|.+++.++++  
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            46788999999999999999999986   699999999987644 22211   1122367889999999988877652  


Q ss_pred             ---------CCCEEEEccccCcccc---ccccccccchhhhhhhhhHHHHHHHHHHHhhc----C-CcceEEEeccceee
Q 035965           79 ---------GCDGVFHVAASMEFDI---NVKDNIETYVQSTVINPAIQSTLNLLKACLKS----E-SVKRVVLTSSVSTI  141 (348)
Q Consensus        79 ---------~~d~Vih~a~~~~~~~---~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~-~~~~~v~~SS~~~~  141 (348)
                               ..|+++|+|+......   ....+.++|  ...+++|+.++..+++++...    + ...++|++||....
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~--~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~  160 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEV--NNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHH--HHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHH--HHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc
Confidence                     3578999998754321   223334445  578999999999999988643    1 24689999998654


Q ss_pred             eecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-CCCcEEEEecCccccC
Q 035965          142 TAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-NKIDLVSVITTTVAGP  208 (348)
Q Consensus       142 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~~lR~~~v~G~  208 (348)
                      .+.+                         ....|+.||.+.+.+.+.++.+ .++++..+.||.|-.+
T Consensus       161 ~~~~-------------------------~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~  203 (259)
T d1oaaa_         161 QPYK-------------------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND  203 (259)
T ss_dssp             SCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred             CCCc-------------------------cchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence            3221                         2357999999999999998876 5799999999988765

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2e-17  Score=141.67  Aligned_cols=172  Identities=19%  Similarity=0.113  Sum_probs=129.6

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc--cCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK--WTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~--~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|++|||||++.||.++++.|+++|++|++++|+.++. .....  ......+..+.+|+.+........+       
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999987644 22111  1123457788899998776655432       


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhc--CCcceEEEeccceeeeecCCCCCCCCcccC
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKS--ESVKRVVLTSSVSTITAKDSSGEWRPVVDE  156 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E  156 (348)
                      ..|+++++|+........+.+.++|  ...+++|+.++..+.+.+...  ....++|++||.+...+.+           
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~--~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p-----------  158 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHV--RKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP-----------  158 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHH--HHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT-----------
T ss_pred             CccccccccccccccccccCCHHHh--hhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCC-----------
Confidence            5899999999876655555555555  578999999998888877532  1136899999987543221           


Q ss_pred             CCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh-----CCCcEEEEecCcccc
Q 035965          157 SCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE-----NKIDLVSVITTTVAG  207 (348)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~lR~~~v~G  207 (348)
                                    ....|+.||.+.+.+.+.++.+     .++++..+.||.|-.
T Consensus       159 --------------~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T  200 (269)
T d1xu9a_         159 --------------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDT  200 (269)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCC
T ss_pred             --------------CchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCC
Confidence                          2357999999999999998765     368899999998743

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.72  E-value=4.3e-17  Score=136.77  Aligned_cols=193  Identities=16%  Similarity=0.168  Sum_probs=131.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHH-------hh--cCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK-------AV--MGCD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-------~~--~~~d   81 (348)
                      ..|||||||+|.||++++++|+++|++|++++|+..+..        .....+.+|..+.+....       .+  ..+|
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD   73 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVD   73 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc--------cccceeccccCchhHHHHHHHHHHHHhcCCCee
Confidence            357999999999999999999999999999999765321        122334466655433322       12  2489


Q ss_pred             EEEEccccCccc-cccccccccchhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcccCCCC
Q 035965           82 GVFHVAASMEFD-INVKDNIETYVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQ  159 (348)
Q Consensus        82 ~Vih~a~~~~~~-~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~  159 (348)
                      ++||+||..... ....+..++|  +..+++|+.++..+++++... ....++|++||.....+.+              
T Consensus        74 ~linnAG~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~--------------  137 (235)
T d1ooea_          74 GVFCVAGGWAGGSASSKDFVKNA--DLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP--------------  137 (235)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT--------------
T ss_pred             EEEECCcccccccccccCcHHHH--hhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcc--------------
Confidence            999999964432 2233333444  467999999999888887753 2246899999987544322              


Q ss_pred             CCcchhhccCCCcchhHhhHHHHHHHHHHHHHhC-----CCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcccc
Q 035965          160 TPIHHVWNKKASGWVYVLSKLLSEETAFKFANEN-----KIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSI  234 (348)
Q Consensus       160 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (348)
                                 ....|+.||.+.+.+.+.++.+.     ++++..+.|+.+-.+.            .+......     
T Consensus       138 -----------~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~------------~~~~~~~~-----  189 (235)
T d1ooea_         138 -----------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM------------NRKWMPNA-----  189 (235)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH------------HHHHSTTC-----
T ss_pred             -----------cccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcc------------hhhhCcCC-----
Confidence                       23579999999999999998663     6788889999864321            11111111     


Q ss_pred             ccccccCCCCcceeeHHHHHHHHHHhhcC
Q 035965          235 LSSVSNRMGSIALVHIEDICNAHIFLMEN  263 (348)
Q Consensus       235 ~~~~~~~~~~r~~i~v~D~a~~~~~~~~~  263 (348)
                              ....|+..+|+++.++..+..
T Consensus       190 --------~~~~~~~~~~va~~~~~~l~~  210 (235)
T d1ooea_         190 --------DHSSWTPLSFISEHLLKWTTE  210 (235)
T ss_dssp             --------CGGGCBCHHHHHHHHHHHHHC
T ss_pred             --------ccccCCCHHHHHHHHHHHhcC
Confidence                    111277899999998765544

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=1.6e-16  Score=135.25  Aligned_cols=226  Identities=16%  Similarity=0.090  Sum_probs=149.9

Q ss_pred             CCCCeEEEeCCCC--hhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANG--YIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatG--fiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|+||||||+|  .||+++++.|+++|++|++.+|+.... .............++..|+.+..+....++       
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            5689999999999  799999999999999999999975533 222222233467788899998877665543       


Q ss_pred             CCCEEEEccccCcccccccccccc---chhhhhhhhhHHHHHHHHHHHhhc-CCcceEEEeccceeeeecCCCCCCCCcc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIET---YVQSTVINPAIQSTLNLLKACLKS-ESVKRVVLTSSVSTITAKDSSGEWRPVV  154 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~  154 (348)
                      ..|++||+|+............+.   ......+..|+.+...+++++... .....+|++||.....+.+         
T Consensus        83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~---------  153 (258)
T d1qsga_          83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP---------  153 (258)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT---------
T ss_pred             ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCC---------
Confidence            479999999875443321111110   011356677888888888877653 2245688888876432221         


Q ss_pred             cCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCc
Q 035965          155 DESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKF  231 (348)
Q Consensus       155 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  231 (348)
                                      ....|+.+|.+.+.+.+.++.+   ++|++..++||.|..+....... .........    ..
T Consensus       154 ----------------~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~----~~  212 (258)
T d1qsga_         154 ----------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-FRKMLAHCE----AV  212 (258)
T ss_dssp             ----------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTT-HHHHHHHHH----HH
T ss_pred             ----------------CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccch-hhhHHHHHH----hC
Confidence                            2246999999999999999887   46999999999998765332111 111111111    11


Q ss_pred             cccccccccCCCCcceeeHHHHHHHHHHhhcCC--CCCceEEEec
Q 035965          232 FSILSSVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQYICCV  274 (348)
Q Consensus       232 ~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~y~~~~  274 (348)
                      ++ .++         +..++|+|.++.+++...  ...|..+..+
T Consensus       213 ~p-l~R---------~~~peeia~~v~fL~s~~s~~itG~~i~vD  247 (258)
T d1qsga_         213 TP-IRR---------TVTIEDVGNSAAFLCSDLSAGISGEVVHVD  247 (258)
T ss_dssp             ST-TSS---------CCCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             CC-CCC---------CcCHHHHHHHHHHHhCchhcCccCceEEEC
Confidence            22 233         558999999999999653  3466554433

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.70  E-value=5.1e-16  Score=133.26  Aligned_cols=229  Identities=14%  Similarity=0.074  Sum_probs=141.2

Q ss_pred             CCCCeEEEeCCCC--hhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-------
Q 035965            9 GRSKTFCVTGANG--YIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-------   78 (348)
Q Consensus         9 ~~~~~ilVtGatG--fiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   78 (348)
                      +++|++|||||+|  .||.+++++|+++|++|++++|+.... ....+........++..|+++..++.++++       
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            5689999999887  799999999999999999999985422 222222334567788999999887766653       


Q ss_pred             CCCEEEEccccCccccccccccccchh--hhhhhhhHHHHHHHHHHHhhcCCcce-EEEeccceeeeecCCCCCCCCccc
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQ--STVINPAIQSTLNLLKACLKSESVKR-VVLTSSVSTITAKDSSGEWRPVVD  155 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~--~~~~~~nv~~~~~ll~~~~~~~~~~~-~v~~SS~~~~~~~~~~~~~~~~~~  155 (348)
                      .+|++||+++.............++..  ......+..+...+...+........ ++.+|+.+.... ..         
T Consensus        83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~-~~---------  152 (274)
T d2pd4a1          83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-MA---------  152 (274)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-CT---------
T ss_pred             CCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccc-cc---------
Confidence            689999999976543322222112111  11222233344444444444332334 444444432211 11         


Q ss_pred             CCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCCCcc
Q 035965          156 ESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFF  232 (348)
Q Consensus       156 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (348)
                                     ....|+.+|.+.+.+.+..+.+   .||++..+.|+.+..+........- .........    .
T Consensus       153 ---------------~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~-~~~~~~~~~----~  212 (274)
T d2pd4a1         153 ---------------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFR-MILKWNEIN----A  212 (274)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHH-HHHHHHHHH----S
T ss_pred             ---------------cchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchH-HHHHHHhhh----h
Confidence                           3357999999999999988776   5799999999988776433221110 001011000    1


Q ss_pred             ccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEEeccCc
Q 035965          233 SILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYICCVKSC  277 (348)
Q Consensus       233 ~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~~~~~~  277 (348)
                      + .++         +...+|+|.++.+++....  ..|..+..+..+
T Consensus       213 p-~~r---------~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         213 P-LRK---------NVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY  249 (274)
T ss_dssp             T-TSS---------CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             h-ccC---------CcCHHHHHHHHHHHhChhhCCCcCceEEECCCh
Confidence            1 222         5689999999999987543  366554444433

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.68  E-value=3e-16  Score=132.07  Aligned_cols=208  Identities=20%  Similarity=0.163  Sum_probs=140.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc------CCCEEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM------GCDGVFH   85 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~Vih   85 (348)
                      |++|||||++.||+++++.|+++|++|++++|+....          +.....+|+.+......+..      ..+.+++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~----------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~   71 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE----------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVS   71 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS----------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc----------cceEeeccccchhhhHHHHHhhhccccccchhh
Confidence            7899999999999999999999999999999976532          45678899998766555432      3455555


Q ss_pred             ccccCcccc----ccccccccchhhhhhhhhHHHHHHHHHHHhhc---------CCcceEEEeccceeeeecCCCCCCCC
Q 035965           86 VAASMEFDI----NVKDNIETYVQSTVINPAIQSTLNLLKACLKS---------ESVKRVVLTSSVSTITAKDSSGEWRP  152 (348)
Q Consensus        86 ~a~~~~~~~----~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---------~~~~~~v~~SS~~~~~~~~~~~~~~~  152 (348)
                      +++......    ......+.|  ...++.|+.+...++..+...         +...++|++||.....+.+       
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~-------  142 (241)
T d1uaya_          72 AAGVGLAEKILGKEGPHGLESF--RRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-------  142 (241)
T ss_dssp             CCCCCCCCCSBCSSSBCCHHHH--HHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-------
T ss_pred             hhhccccccccccccchhHHHH--HHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC-------
Confidence            554322211    111222222  467888988888877765432         1246899999987544322       


Q ss_pred             cccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          153 VVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       153 ~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                                        ....|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+.......   .........  
T Consensus       143 ------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~---~~~~~~~~~--  199 (241)
T d1uaya_         143 ------------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE---KAKASLAAQ--  199 (241)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH---HHHHHHHTT--
T ss_pred             ------------------CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhh---hHHHHHHhc--
Confidence                              2357999999999999999876   57999999999987653222111   111111111  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCCCCCceEEE
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDRAQGQYIC  272 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~~~~~y~~  272 (348)
                        .+..++         +...+|+|+++.++++.....|+.+.
T Consensus       200 --~~~~~R---------~g~pedvA~~v~fL~s~~~iTG~~i~  231 (241)
T d1uaya_         200 --VPFPPR---------LGRPEEYAALVLHILENPMLNGEVVR  231 (241)
T ss_dssp             --CCSSCS---------CCCHHHHHHHHHHHHHCTTCCSCEEE
T ss_pred             --CCCCCC---------CcCHHHHHHHHHHHHhCCCCCCCEEE
Confidence              121234         44799999999999986655665543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.64  E-value=1.8e-15  Score=130.50  Aligned_cols=219  Identities=15%  Similarity=0.077  Sum_probs=134.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--cccccc--CCCC-----------------CeEEEEccCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKW--TRSD-----------------RLRLFQADLQV   69 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~--~~~~-----------------~~~~~~~Dl~d   69 (348)
                      +..++||||++.||.++++.|+++|++|++.+++..+.  ......  ....                 .+....+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            45789999999999999999999999999988764322  111000  0011                 23344566888


Q ss_pred             cchHHHhhc-------CCCEEEEccccCccccccccccccchh------------hhhhhhhHHHHHHHHHHHhhc----
Q 035965           70 EGSFDKAVM-------GCDGVFHVAASMEFDINVKDNIETYVQ------------STVINPAIQSTLNLLKACLKS----  126 (348)
Q Consensus        70 ~~~~~~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~~------------~~~~~~nv~~~~~ll~~~~~~----  126 (348)
                      .+++.++++       ++|++||+||........+...++|..            ...+.+|+.+...+.+++...    
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            777776653       689999999986554332322222210            135788999998888875431    


Q ss_pred             -----CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEE
Q 035965          127 -----ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLV  198 (348)
Q Consensus       127 -----~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~  198 (348)
                           +...++|+++|.....+..                         ....|+.+|.+.+.+.+.++.+   +||++.
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~-------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN  216 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLL-------------------------GYTIYTMAKGALEGLTRSAALELAPLQIRVN  216 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             HHHhcCCCCcccccccccccCCcc-------------------------ceeeeccccccchhhhHHHHHHhCCcccccc
Confidence                 2235677777765322111                         2357999999999999999876   479999


Q ss_pred             EEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceEEE
Q 035965          199 SVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQYIC  272 (348)
Q Consensus       199 ~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y~~  272 (348)
                      .+.||.+-.....   +.   ........   .++..++         +...+|+|+++++++....  ..|..+.
T Consensus       217 ~I~PG~t~~~~~~---~~---~~~~~~~~---~~pl~~R---------~~~peeiA~~v~fL~S~~s~~itG~~i~  274 (284)
T d1e7wa_         217 GVGPGLSVLVDDM---PP---AVWEGHRS---KVPLYQR---------DSSAAEVSDVVIFLCSSKAKYITGTCVK  274 (284)
T ss_dssp             EEEESSBCCGGGS---CH---HHHHHHHT---TCTTTTS---------CBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             ccccccccccccC---CH---HHHHHHHh---cCCCCCC---------CCCHHHHHHHHHHHhCchhcCccCCeEE
Confidence            9999963222111   11   11111111   1222244         4489999999999986543  3565433

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.61  E-value=7.1e-15  Score=125.59  Aligned_cols=172  Identities=18%  Similarity=0.064  Sum_probs=117.6

Q ss_pred             CCCCCeEEEeCCCC--hhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhc-----
Q 035965            8 TGRSKTFCVTGANG--YIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-----   78 (348)
Q Consensus         8 ~~~~~~ilVtGatG--fiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   78 (348)
                      .+++|++|||||+|  .||.+++++|+++|++|++++|+..+.  .....  ...+...+.+|+++.++...+++     
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~--~~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR--LPAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT--SSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH--cCCceeeEeeecccccccccccchhhhc
Confidence            46789999999654  699999999999999999999876543  12221  22457788999999876655432     


Q ss_pred             -----CCCEEEEccccCccccc-----cccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccceeeeecCCCC
Q 035965           79 -----GCDGVFHVAASMEFDIN-----VKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVSTITAKDSSG  148 (348)
Q Consensus        79 -----~~d~Vih~a~~~~~~~~-----~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~~~~~~~~~~  148 (348)
                           .+|+++|+++.......     .+....+|  ...+..|+.......+.+........++.++|.......+   
T Consensus        81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p---  155 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADV--SKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP---  155 (268)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT---
T ss_pred             cccCCCcceeeecccccCccccccccccccchhhh--hhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCc---
Confidence                 36999999996543221     11212222  3456677777777777766544234455554433221111   


Q ss_pred             CCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccC
Q 035965          149 EWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGP  208 (348)
Q Consensus       149 ~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~  208 (348)
                                            ....|+.+|.+.+.+.+.++.+   ++|++..+.||.|-.+
T Consensus       156 ----------------------~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~  196 (268)
T d2h7ma1         156 ----------------------AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL  196 (268)
T ss_dssp             ----------------------TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred             ----------------------ccchhhccccchhhccccchhhhhccCCcceEEecCCCCCh
Confidence                                  2347999999999999998876   5799999999988654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.61  E-value=5.5e-14  Score=121.82  Aligned_cols=226  Identities=14%  Similarity=0.083  Sum_probs=136.6

Q ss_pred             CCCCCCeEEEeCCCC--hhHHHHHHHHHHCCCeEEEEEcCCCcc--------------ccccccCCCC--CeEEEEccC-
Q 035965            7 STGRSKTFCVTGANG--YIGSWLVKTLLERGYIVHATVRDPGKL--------------QIFSKWTRSD--RLRLFQADL-   67 (348)
Q Consensus         7 ~~~~~~~ilVtGatG--fiG~~l~~~L~~~g~~V~~~~r~~~~~--------------~~~~~~~~~~--~~~~~~~Dl-   67 (348)
                      +.+++|++|||||+|  .||..+++.|+++|.+|++.+|++...              ..........  .+..+..++ 
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            467889999999987  899999999999999999998853210              0000000000  111122112 


Q ss_pred             -----------------CCcchHHHh-------hcCCCEEEEccccCcc--ccccccccccchhhhhhhhhHHHHHHHHH
Q 035965           68 -----------------QVEGSFDKA-------VMGCDGVFHVAASMEF--DINVKDNIETYVQSTVINPAIQSTLNLLK  121 (348)
Q Consensus        68 -----------------~d~~~~~~~-------~~~~d~Vih~a~~~~~--~~~~~~~~~~~~~~~~~~~nv~~~~~ll~  121 (348)
                                       .+...+.++       +.++|++||+||....  ....+.+.++|  ...+++|+.+...+++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~--~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGY--LAAISASSYSFVSLLS  161 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHH--HHHHHHHTHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccc--cccccchhhhhhhhhh
Confidence                             222222222       2368999999996432  22223334445  5789999999999999


Q ss_pred             HHhhcC-CcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh----CCCc
Q 035965          122 ACLKSE-SVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE----NKID  196 (348)
Q Consensus       122 ~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~  196 (348)
                      ++.... ...+++.+++.+.......                        ....|..+|...+.+.+.++.+    ++++
T Consensus       162 ~~~~~~~~~g~~~~~~~~~~~~~~~~------------------------~~~~y~~aKaa~~~l~~~~a~e~~~~~gIr  217 (297)
T d1d7oa_         162 HFLPIMNPGGASISLTYIASERIIPG------------------------YGGGMSSAKAALESDTRVLAFEAGRKQNIR  217 (297)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSCCTT------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             HHHHHhhcCCcceeeeehhhcccccc------------------------cccceecccccccccccccchhccccceEE
Confidence            887542 1234566665542211111                        2346999999888777765443    5799


Q ss_pred             EEEEecCccccCCCCCCCCchHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCC--CCCceEEEe
Q 035965          197 LVSVITTTVAGPFLTSSVPSSIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQYICC  273 (348)
Q Consensus       197 ~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~y~~~  273 (348)
                      +..+.||.+..+..... . ....+......   ..| .++         +...+|+|+++++++...  ...|+.+..
T Consensus       218 vN~I~PG~i~T~~~~~~-~-~~~~~~~~~~~---~~P-lgR---------~~~peevA~~v~fL~S~~a~~itGq~i~v  281 (297)
T d1d7oa_         218 VNTISAGPLGSRAAKAI-G-FIDTMIEYSYN---NAP-IQK---------TLTADEVGNAAAFLVSPLASAITGATIYV  281 (297)
T ss_dssp             EEEEEECCCBCCCSSCC-S-HHHHHHHHHHH---HSS-SCC---------CBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             ecccccccccchhhhhc-c-CCHHHHHHHHh---CCC-CCC---------CCCHHHHHHHHHHHhCchhcCCcCceEEE
Confidence            99999999987754431 1 11112111111   112 334         458999999999999643  346654433

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.57  E-value=7.9e-15  Score=124.49  Aligned_cols=222  Identities=18%  Similarity=0.164  Sum_probs=123.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhh--------cCCCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAV--------MGCDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--------~~~d~   82 (348)
                      ||.||||||+|.||++++++|+++|++|++++|+..+               ...|+.+.+......        ..+|+
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~---------------~~~d~~~~~~~~~~~~~~~~~~~~~id~   65 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE---------------VIADLSTAEGRKQAIADVLAKCSKGMDG   65 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS---------------EECCTTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH---------------HHHHhcCHHHHHHHHHHHHHHhCCCCcE
Confidence            6889999999999999999999999999999997642               235666554433221        24899


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHh----hcCCcceEEEeccceeeeecCCCCCCCCcccCCC
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACL----KSESVKRVVLTSSVSTITAKDSSGEWRPVVDESC  158 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~  158 (348)
                      ++|+|+......         ........|..+...+.+...    +.. ......+++...........   .......
T Consensus        66 lv~~Ag~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~  132 (257)
T d1fjha_          66 LVLCAGLGPQTK---------VLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKN---PLALALE  132 (257)
T ss_dssp             EEECCCCCTTCS---------SHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGC---TTHHHHH
T ss_pred             EEEcCCCCCcHH---------HHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhh---hhhhhcc
Confidence            999998654333         223556677777766665543    223 34555555543221111000   0000000


Q ss_pred             CCCc---chh-hc--cCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCchHHHHHhhhcCCC
Q 035965          159 QTPI---HHV-WN--KKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPSSIQVLLSPITGDS  229 (348)
Q Consensus       159 ~~~~---~~~-~~--~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~  229 (348)
                      ....   ... ..  ...+...|+.+|.+.+.+.+.++.+   +||++..+.||.|-.+........  ......+..  
T Consensus       133 ~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~--  208 (257)
T d1fjha_         133 AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD--PRYGESIAK--  208 (257)
T ss_dssp             HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------
T ss_pred             CCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC--HHHHHHHHh--
Confidence            0000   000 00  0012236999999999999998866   579999999999976643221000  000011111  


Q ss_pred             CccccccccccCCCCcceeeHHHHHHHHHHhhcCC--CCCceEEEec
Q 035965          230 KFFSILSSVSNRMGSIALVHIEDICNAHIFLMEND--RAQGQYICCV  274 (348)
Q Consensus       230 ~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~--~~~~~y~~~~  274 (348)
                       .....++         +...+|+|+++.+++...  ...|..+..+
T Consensus       209 -~~~PlgR---------~g~p~eva~~v~fL~S~~s~~itG~~i~vD  245 (257)
T d1fjha_         209 -FVPPMGR---------RAEPSEMASVIAFLMSPAASYVHGAQIVID  245 (257)
T ss_dssp             -CCCSTTS---------CCCTHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             -cCCCCCC---------CcCHHHHHHHHHHHhCchhCCccCceEEeC
Confidence             1111344         448999999999998643  3466544333

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.51  E-value=4.4e-13  Score=117.55  Aligned_cols=170  Identities=11%  Similarity=0.068  Sum_probs=113.2

Q ss_pred             CCeEEEeC--CCChhHHHHHHHHHHCCCeEEEEEcCCCcc-------------cccc-ccCCCCCeEEEE----------
Q 035965           11 SKTFCVTG--ANGYIGSWLVKTLLERGYIVHATVRDPGKL-------------QIFS-KWTRSDRLRLFQ----------   64 (348)
Q Consensus        11 ~~~ilVtG--atGfiG~~l~~~L~~~g~~V~~~~r~~~~~-------------~~~~-~~~~~~~~~~~~----------   64 (348)
                      .|.+||||  ++..||..+++.|+++|.+|++..+.....             .... ............          
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            46789999  557999999999999999999987653211             0000 000001112222          


Q ss_pred             ----------ccCCCcchHHHhh-------cCCCEEEEccccCccc--cccccccccchhhhhhhhhHHHHHHHHHHHhh
Q 035965           65 ----------ADLQVEGSFDKAV-------MGCDGVFHVAASMEFD--INVKDNIETYVQSTVINPAIQSTLNLLKACLK  125 (348)
Q Consensus        65 ----------~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~~--~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~  125 (348)
                                .|+.+.+++++++       .++|++||+||.....  ...+.+.++|  ...+++|+.+...+++++..
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~--~~~~~vn~~~~~~~~k~~~~  159 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGY--LDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHH--HHHHHHHTHHHHHHHHHHGG
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhh--hhhcccchhHHHHHHHHHHh
Confidence                      2555555554443       3689999999865432  2223344555  57899999999999998876


Q ss_pred             c-CCcceEEEeccceeeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh----CCCcEEEE
Q 035965          126 S-ESVKRVVLTSSVSTITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE----NKIDLVSV  200 (348)
Q Consensus       126 ~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~l  200 (348)
                      . ....++|.+||.+.....+.                        ....|+.+|.+.+.+.+.++.+    +||++..+
T Consensus       160 ~m~~~GsIv~iss~~~~~~~p~------------------------y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI  215 (329)
T d1uh5a_         160 IMKPQSSIISLTYHASQKVVPG------------------------YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTI  215 (329)
T ss_dssp             GEEEEEEEEEEECGGGTSCCTT------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred             hcccccccccceeehhcccccc------------------------cchhhhhhhccccccchhhHHHHhcccCcEEEEE
Confidence            4 22468999988664322111                        2346999999999999988754    58999999


Q ss_pred             ecCccc
Q 035965          201 ITTTVA  206 (348)
Q Consensus       201 R~~~v~  206 (348)
                      .||.|-
T Consensus       216 ~PG~i~  221 (329)
T d1uh5a_         216 SAGPLK  221 (329)
T ss_dssp             EECCCC
T ss_pred             ecCccc
Confidence            999874

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.49  E-value=6e-13  Score=113.22  Aligned_cols=219  Identities=16%  Similarity=0.137  Sum_probs=129.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccc--cCCCCCeEEEEccCCCcc----hHHHh-------
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSK--WTRSDRLRLFQADLQVEG----SFDKA-------   76 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~--~~~~~~~~~~~~Dl~d~~----~~~~~-------   76 (348)
                      ...|||||++.||.+++++|+++|++|++++|+..+.  .....  ........+...|..+..    .+.++       
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999986542  11111  112345666776665432    22222       


Q ss_pred             hcCCCEEEEccccCccccccccccccc---------hhhhhhhhhHHHHHHHHHHHhhcC--------CcceEEEeccce
Q 035965           77 VMGCDGVFHVAASMEFDINVKDNIETY---------VQSTVINPAIQSTLNLLKACLKSE--------SVKRVVLTSSVS  139 (348)
Q Consensus        77 ~~~~d~Vih~a~~~~~~~~~~~~~~~~---------~~~~~~~~nv~~~~~ll~~~~~~~--------~~~~~v~~SS~~  139 (348)
                      +..+|++||+||..............+         .....+..|+.+...........-        ....++.+|+..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            236999999999765432211100000         012344455555554444443321        123455555544


Q ss_pred             eeeecCCCCCCCCcccCCCCCCcchhhccCCCcchhHhhHHHHHHHHHHHHHh---CCCcEEEEecCccccCCCCCCCCc
Q 035965          140 TITAKDSSGEWRPVVDESCQTPIHHVWNKKASGWVYVLSKLLSEETAFKFANE---NKIDLVSVITTTVAGPFLTSSVPS  216 (348)
Q Consensus       140 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~  216 (348)
                      .....+                         ....|+.||...+.+.+.++.+   +||++..+.||.+..+....   .
T Consensus       162 ~~~~~~-------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~---~  213 (266)
T d1mxha_         162 TDLPLP-------------------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP---Q  213 (266)
T ss_dssp             GGSCCT-------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC---H
T ss_pred             ccccCc-------------------------chhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC---H
Confidence            221111                         3357999999999999998876   57999999999987653322   1


Q ss_pred             hHHHHHhhhcCCCCccccccccccCCCCcceeeHHHHHHHHHHhhcCCC--CCceE-EEe
Q 035965          217 SIQVLLSPITGDSKFFSILSSVSNRMGSIALVHIEDICNAHIFLMENDR--AQGQY-ICC  273 (348)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~v~D~a~~~~~~~~~~~--~~~~y-~~~  273 (348)
                        . ....+...   ++ .++        -+...+|+|+++++++....  ..|.. .+.
T Consensus       214 --~-~~~~~~~~---~p-l~r--------~~~~peeva~~v~fL~s~~s~~itG~~i~vD  258 (266)
T d1mxha_         214 --E-TQEEYRRK---VP-LGQ--------SEASAAQIADAIAFLVSKDAGYITGTTLKVD  258 (266)
T ss_dssp             --H-HHHHHHTT---CT-TTS--------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             --H-HHHHHHhc---CC-CCC--------CCCCHHHHHHHHHHHhCchhCCccCCeEEEC
Confidence              1 11111111   12 111        13479999999999997543  46654 443

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.41  E-value=5.4e-15  Score=119.54  Aligned_cols=85  Identities=20%  Similarity=0.132  Sum_probs=70.1

Q ss_pred             cCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965            6 ESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus         6 ~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      +..+++|+|+||||+|.||+.+++.|+++|++|++++|+..+. ..........++.+..+|+.|.+++.+++.++|+||
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeee
Confidence            4467889999999999999999999999999999999987654 222211122356778899999999999999999999


Q ss_pred             EccccC
Q 035965           85 HVAASM   90 (348)
Q Consensus        85 h~a~~~   90 (348)
                      |+|+..
T Consensus        98 n~Ag~g  103 (191)
T d1luaa1          98 TAGAIG  103 (191)
T ss_dssp             ECCCTT
T ss_pred             ecCccc
Confidence            999864

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.63  E-value=1.1e-07  Score=71.52  Aligned_cols=115  Identities=17%  Similarity=0.073  Sum_probs=78.2

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      ||.|+||+|.+|++++..|..+|.  ++..++..+.+.....+.. .........-+ ...+..+.++++|+||.+||..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~-~~~~~~~~~~~-~~~~~~~~~~~aDivVitag~~   79 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSH-IETRATVKGYL-GPEQLPDCLKGCDVVVIPAGVP   79 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTT-SSSSCEEEEEE-SGGGHHHHHTTCSEEEECCSCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhh-hhhhcCCCeEE-cCCChHHHhCCCCEEEECCCcC
Confidence            799999999999999999988874  7889988654432222211 11111111112 2355677788999999999964


Q ss_pred             ccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           91 EFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      ....  .+      +.+.++.|+...+.+++.+.++++...++.+|.
T Consensus        80 ~~~g--~s------R~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          80 RKPG--MT------RDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             CCTT--CC------GGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCC--CC------cchHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            3332  22      247899999999999999999984444544443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.58  E-value=1.9e-07  Score=70.44  Aligned_cols=111  Identities=10%  Similarity=0.103  Sum_probs=72.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc-----ccccccCCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL-----QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      ..|||.|.|+ |++|+.++..|+.+|  .+|.++|++..+.     ++..............+|.       +.++++|+
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~adi   75 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDADL   75 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccccE
Confidence            3679999996 999999999999987  6999999876432     1111111112334455553       23568999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      |+.+|+......  .      .....+..|+.-.+.+.+.+.+.++...++.+|
T Consensus        76 vvitag~~~~~g--~------~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          76 VVITAGAPQKPG--E------SRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             EEECCCC------------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecccccCCC--C------CHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            999998644332  1      223778899999999999999988344444433

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.53  E-value=7.5e-08  Score=71.81  Aligned_cols=70  Identities=19%  Similarity=0.175  Sum_probs=58.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHV   86 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~   86 (348)
                      |+|+|.|+ |.+|++|++.|.+.|++|++++.++... .....    -+..++.+|.+|++.+.++ ++++|.++-+
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~----~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----IDALVINGDCTKIKTLEDAGIEDADMYIAV   72 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----CSSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh----hhhhhccCcccchhhhhhcChhhhhhhccc
Confidence            68999998 9999999999999999999999987655 32221    1578899999999999887 5788988865

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.48  E-value=8.8e-07  Score=66.54  Aligned_cols=115  Identities=18%  Similarity=0.089  Sum_probs=73.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHC---CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLER---GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~---g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |||.|+|++|.+|++++..|..+   +.++..++..+... ....+..-........  +...... +.++++|+||.+|
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~--~~~~~~~-~~~~~aDvvvita   77 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDAT-PALEGADVVLISA   77 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEE--ECSSCCH-HHHTTCSEEEECC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcE--EEcCCCc-cccCCCCEEEECC
Confidence            68999999999999999887543   47899998754321 1111111001111111  1112223 3577999999999


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      |......  .      ...+.+..|..-.+.+.+.+.+.++...+|.+|.
T Consensus        78 G~~~k~g--~------~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          78 GVRRKPG--M------DRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             SCCCCTT--C------CGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CccCCCC--c------chhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence            9753332  2      2247899999999999999999874455555554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.36  E-value=2.6e-06  Score=63.91  Aligned_cols=110  Identities=10%  Similarity=0.032  Sum_probs=73.9

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc-------ccccc-cCCCCCeEEEEccCCCcchHHHhhcCCC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL-------QIFSK-WTRSDRLRLFQADLQVEGSFDKAVMGCD   81 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~-------~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   81 (348)
                      |||.|+||+|.+|+.++..|+.+|  .++.++++++...       .+... ......++.....-.|.    +.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence            589999999999999999999888  5899999875321       11111 11122334332221222    3567899


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEE
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL  134 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  134 (348)
                      +||-+||......  .      .+.+.+..|+.-.+.+.+...+.+ .+.++.
T Consensus        77 vVVitAG~~~~~g--~------sR~dl~~~Na~iv~~i~~~i~~~~-~~~iiv  120 (145)
T d1hyea1          77 VVIITSGVPRKEG--M------SRMDLAKTNAKIVGKYAKKIAEIC-DTKIFV  120 (145)
T ss_dssp             EEEECCSCCCCTT--C------CHHHHHHHHHHHHHHHHHHHHHHC-CCEEEE
T ss_pred             EEEEecccccCCC--C------ChhhhhhhhHHHHHHHHHHHhccC-CCeEEE
Confidence            9999999643322  2      224788999999999999998887 344443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.34  E-value=2.4e-06  Score=64.44  Aligned_cols=110  Identities=14%  Similarity=0.182  Sum_probs=75.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-----cccccc-CCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-----QIFSKW-TRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-----~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      .+||.|+|| |++|++++..|+.+|.  ++.++++++.+.     .+.... .....+.+...|.       +.++++|+
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daDv   77 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDADL   77 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCSE
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhcccee
Confidence            568999997 9999999999998874  899999876542     111111 1122344444442       34678999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      ||.+|+......  .      .+.+.+..|+.-.+.+.+.+.+.++-..++.+|
T Consensus        78 vvitag~~~~~~--~------~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          78 VVICAGANQKPG--E------TRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             EEECCSCCCCTT--T------CSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEEecccccccC--c------chhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            999998654332  1      223778899999999999999887445555543

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.34  E-value=3.2e-07  Score=69.96  Aligned_cols=121  Identities=16%  Similarity=0.089  Sum_probs=76.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc--ccccccC---CCCCeEEEEccCCCcchHHHhhcCCC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL--QIFSKWT---RSDRLRLFQADLQVEGSFDKAVMGCD   81 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~d   81 (348)
                      ..+.+||.|.|+ |.+|+.++..|..++. ++.+++.++...  ....+..   ....-....+    ....++.++++|
T Consensus         4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~----~~~~~~~~~~ad   78 (154)
T d1pzga1           4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA----EYSYEAALTGAD   78 (154)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE----ECSHHHHHTTCS
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec----cCchhhhhcCCC
Confidence            445679999997 9999999998888774 888888876543  1111100   0000000111    123456778999


Q ss_pred             EEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           82 GVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        82 ~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      +|+-+++..........   ++.....+..|+.-.+.+++.+.+.++...++.+|
T Consensus        79 iVvitag~~~~~g~~~~---~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          79 CVIVTAGLTKVPGKPDS---EWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             EEEECCSCSSCTTCCGG---GCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             eEEEecccccCCCCCCc---ccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99999987543321110   00223778899999999999999988444444433

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.30  E-value=7.4e-07  Score=69.81  Aligned_cols=73  Identities=16%  Similarity=0.247  Sum_probs=57.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      .|+|+|.|| |++|++++++|.++||+|++++|+..+. .+...   .+.......+..+.......+...|.++.+.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG---VQHSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT---CTTEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc---ccccccccccccchhhhHhhhhccceeEeec
Confidence            479999997 9999999999999999999999998766 43332   2345555667777777777788888888654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.28  E-value=3.6e-06  Score=62.93  Aligned_cols=109  Identities=14%  Similarity=0.122  Sum_probs=69.5

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc--cccccc---CCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL--QIFSKW---TRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~--~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      +||.|+|+ |.+|+.++..|+.++.  ++.++++++.+.  ....+.   ..........+|       .+.++++|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceEE
Confidence            58999997 9999999999999874  899999877643  222111   111223322222       23467899999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      -+|+......  ..     . ...+..|+.-.+.+.+.+.+.++...++.+|
T Consensus        74 itag~~~~~~--~~-----r-~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          74 VTAGANRKPG--ET-----R-LDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             ECCCC--------C-----H-HHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EecccccCcC--cc-----h-hHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            9998654322  22     2 3778999999999999999987344444443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.21  E-value=7.3e-06  Score=61.06  Aligned_cols=108  Identities=13%  Similarity=0.009  Sum_probs=73.1

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCc--c-----ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGK--L-----QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~--~-----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      ||.|+||+|.+|++++..|+.++.  ++.+++....+  .     .+..........+...+|..       .++++|+|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~-------~~~~aDiV   74 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE-------DTAGSDVV   74 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG-------GGTTCSEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH-------HhhhcCEE
Confidence            899999999999999999999874  78888853221  1     12111111223444444432       25689999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEe
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT  135 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~  135 (348)
                      +-+||......  .+      +.+.++.|+.-.+.+.+...+.++...++.+
T Consensus        75 vitaG~~~~~g--~~------R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivv  118 (142)
T d1o6za1          75 VITAGIPRQPG--QT------RIDLAGDNAPIMEDIQSSLDEHNDDYISLTT  118 (142)
T ss_dssp             EECCCCCCCTT--CC------HHHHHHHHHHHHHHHHHHHHTTCSCCEEEEC
T ss_pred             EEecccccccC--Cc------hhhHHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence            99998643322  22      2478999999999999999998844445544

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.20  E-value=1.1e-06  Score=65.30  Aligned_cols=71  Identities=24%  Similarity=0.195  Sum_probs=58.2

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a~   88 (348)
                      |+++|.|+ |-+|+++++.|.++|++|++++.++... .+..     .....+.+|.++++.+.++ ++++|.||-+.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~-----~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-----YATHAVIANATEENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT-----TCSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH-----hCCcceeeecccchhhhccCCccccEEEEEcC
Confidence            57889987 9999999999999999999999987655 3322     2567889999999999887 678998886644

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.18  E-value=8.1e-07  Score=66.78  Aligned_cols=109  Identities=11%  Similarity=0.017  Sum_probs=72.9

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc--ccccccC----CCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL--QIFSKWT----RSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      |||.|+|| |.+|+.++..|+..|  .++.++++++.+.  ....+..    .....++...  .|    .+.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~----~~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND----YADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CC----HHHhcCCeEE
Confidence            58999996 999999999999887  5999999887643  1111110    1112333221  22    2346789999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEe
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT  135 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~  135 (348)
                      +-+||......  .      .....++.|+.-.+.+.+.+.+.++...++.+
T Consensus        74 vitag~~~~~g--~------~r~~l~~~N~~i~~~i~~~i~~~~p~aivivv  117 (142)
T d1guza1          74 IITAGLPRKPG--M------TREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV  117 (142)
T ss_dssp             EECCSCCCCTT--C------CHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred             EEEEecCCCCC--C------chHHHHHHHHHHHHHHHHHhhccCCCeEEEEe
Confidence            99998644332  1      22477889999999999999988744444443

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.14  E-value=5.5e-06  Score=61.78  Aligned_cols=109  Identities=15%  Similarity=0.144  Sum_probs=72.9

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc--ccccc---cCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL--QIFSK---WTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      |||.|.|+ |.+|+.++..|+.++  .++.++++++.+.  ....+   ............|   .    +.++++|+|+
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv   72 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---Y----ADLKGSDVVI   72 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---G----GGGTTCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---H----HHhcCCCEEE
Confidence            58999997 999999999998886  5899999876433  11111   1111233433333   2    3467899999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      -+|+......  .      ...+.+..|+.-.+.+.+...+.++...++.+|
T Consensus        73 itag~~~~~g--~------~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          73 VAAGVPQKPG--E------TRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             ECCCCCCCSS--C------CHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EecccccCCC--c------chhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            9998754433  1      223778889999999999999988444444433

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.12  E-value=1.2e-05  Score=60.99  Aligned_cols=112  Identities=11%  Similarity=0.046  Sum_probs=75.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc--c---ccccc-CCCCCeEEEEccCCCcchHHHhhcCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL--Q---IFSKW-TRSDRLRLFQADLQVEGSFDKAVMGC   80 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~--~---~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~   80 (348)
                      .+.+||.|.|+ |.+|+.++..|..+|.  ++.+++++++..  .   +.... ..........+|.       +.++++
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~-------~~~~~a   89 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY-------SVTANS   89 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG-------GGGTTC
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch-------hhcccc
Confidence            34579999996 9999999999999985  899999875433  1   11111 0111222222322       236689


Q ss_pred             CEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      |+|+.+||......  .+     . ...+..|+.-.+.++....+.++..-+|.+|
T Consensus        90 diVVitAg~~~~~g--~t-----R-~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          90 KIVVVTAGVRQQEG--ES-----R-LNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             SEEEECCSCCCCTT--CC-----G-GGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cEEEEecCCccccC--cc-----h-HHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99999999754332  22     2 3778899999999999999887444455554

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=98.07  E-value=1.2e-05  Score=59.90  Aligned_cols=110  Identities=14%  Similarity=0.095  Sum_probs=73.5

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc--c---cccccCCCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL--Q---IFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~--~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      .||.|+|+ |.+|++++..|+.+|.  ++.++++++.+.  .   +...............+  +   . +.++++|+||
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~---~-~~~~daDvVV   74 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--D---P-EICRDADMVV   74 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--C---G-GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--C---H-HHhhCCcEEE
Confidence            58999997 9999999999998874  899999876533  1   22111111223333221  1   2 2366899999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      -+||......  ..     . .+.+..|+.-.+.+.+.+.+.++...++.+|
T Consensus        75 itaG~~~~~g--~~-----R-~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          75 ITAGPRQKPG--QS-----R-LELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             ECCCCCCCTT--CC-----H-HHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EecccccCCC--Cc-----h-hhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            9999754332  22     2 3788999999999999999887344444443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=98.02  E-value=1.5e-05  Score=59.66  Aligned_cols=111  Identities=12%  Similarity=0.083  Sum_probs=71.2

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc-----ccccc-cCCCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL-----QIFSK-WTRSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~-----~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      |||.|+|+ |.+|+.++..|+.+|  .++.++++++.+.     .+... ............|.       +.++++|+|
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~adiV   73 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADADVV   73 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTCSEE
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH-------HHhccccEE
Confidence            68999995 999999999999887  4899999876543     11111 11112233333332       235789999


Q ss_pred             EEccccCcccc-ccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEe
Q 035965           84 FHVAASMEFDI-NVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLT  135 (348)
Q Consensus        84 ih~a~~~~~~~-~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~  135 (348)
                      |-+||...... ....     .....++.|+.-.+.+.+.+++.++...+|.+
T Consensus        74 VitaG~~~~~~~~~g~-----~R~~l~~~N~~i~~~i~~~i~~~~p~aivivv  121 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTG-----DRFAELKFTSSMVQSVGTNLKESGFHGVLVVI  121 (146)
T ss_dssp             EECCSCGGGTC------------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             EEeccccccccccCCc-----cHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe
Confidence            99998643221 0011     12367888999999999999988744444443

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.02  E-value=1e-05  Score=61.42  Aligned_cols=113  Identities=12%  Similarity=0.121  Sum_probs=73.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCcc-----ccccccCC-CCCeEEEEccCCCcchHHHhhcC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGKL-----QIFSKWTR-SDRLRLFQADLQVEGSFDKAVMG   79 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~~-----~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~   79 (348)
                      .++..||.|+|+ |.+|++++..|..+|.  ++.+++++..+.     ++...... .........|.       +.+++
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~   87 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSAN   87 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTT
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch-------hhhcc
Confidence            344568999996 9999999999998874  899999876432     12111111 11222222332       23568


Q ss_pred             CCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           80 CDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      +|+||-+|+......  .+     . ...++.|+.-.+.+.....+.++...++.+|
T Consensus        88 adivvitag~~~~~~--~~-----R-~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          88 SKLVIITAGARMVSG--QT-----R-LDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             EEEEEECCSCCCCTT--TC-----S-SCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             ccEEEEecccccCCC--CC-----H-HHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            999999998654433  22     2 3778889999999999888877444455544

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.99  E-value=5.8e-06  Score=62.85  Aligned_cols=114  Identities=15%  Similarity=0.007  Sum_probs=69.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC----e-E--EEEEcCCCcccccc----cc-CCCCCeEEEEccCCCcchHHHhhc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY----I-V--HATVRDPGKLQIFS----KW-TRSDRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~----~-V--~~~~r~~~~~~~~~----~~-~~~~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      ++||.|+||+|++|++++..|+..+.    + +  ..++-.........    .. ........+...    ....+.++
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   79 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVAFK   79 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhhcc
Confidence            56999999999999999999987642    1 1  12221111111110    00 011223333332    23456788


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCc-ceEEEec
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESV-KRVVLTS  136 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~v~~S  136 (348)
                      ++|+||-+||......  .      ...+.+..|+.-.+.+.+.+.+..+. ..++.+|
T Consensus        80 ~advViitaG~~~~pg--~------~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          80 DADYALLVGAAPRKAG--M------ERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             TCSEEEECCCCCCCTT--C------CHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cccEEEeecCcCCCCC--C------cHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            9999999999754332  2      22478889999999999999886422 3444444

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.98  E-value=5.1e-06  Score=64.33  Aligned_cols=114  Identities=15%  Similarity=0.003  Sum_probs=70.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC---C--C--eEEEEEcCCCcccccc----ccC-CCCCeEEEEccCCCcchHHHhhc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER---G--Y--IVHATVRDPGKLQIFS----KWT-RSDRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~---g--~--~V~~~~r~~~~~~~~~----~~~-~~~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      .-||.||||+|.||++|+..|++.   |  .  .++.++..........    +.. ..+....+..    .....+.++
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~----~~~~~~~~~   99 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI----GIDPYEVFE   99 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHTT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc----cccchhhcc
Confidence            348999999999999999999874   2  2  3444554332111110    000 0112222221    123456788


Q ss_pred             CCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCC-cceEEEec
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSES-VKRVVLTS  136 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~v~~S  136 (348)
                      ++|+||-++|......  .      ...+.+..|+.-.+.+.+++.+..+ ..+++.+|
T Consensus       100 ~aDvVvi~ag~~rkpg--~------tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         100 DVDWALLIGAKPRGPG--M------ERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             TCSEEEECCCCCCCTT--C------CHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCceEEEeeccCCCCC--C------cHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            9999999998753333  2      2247889999999999999998752 33455554

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.94  E-value=3.3e-05  Score=57.48  Aligned_cols=109  Identities=11%  Similarity=0.044  Sum_probs=71.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCCcc--cccccc---C-CCCCeEEEE-ccCCCcchHHHhhcCCCE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPGKL--QIFSKW---T-RSDRLRLFQ-ADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~~---~-~~~~~~~~~-~Dl~d~~~~~~~~~~~d~   82 (348)
                      |||.|+|+ |.+|++++..|+.+|  .++.++++++.+.  ....+.   . ......... .|.       +.++++|+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-------~~~~~adi   72 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLLKGSEI   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-------GGGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH-------HHhccccE
Confidence            68999996 999999999998887  4899999876543  111110   0 111122222 222       35678999


Q ss_pred             EEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           83 VFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        83 Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      |+-+|+......  .      ...+.+..|+.-...+.+.+.+.++...++.+|
T Consensus        73 Vvitag~~~~~g--~------~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          73 IVVTAGLARKPG--M------TRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EEECCCCCCCSS--C------CHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEeccccCCCC--C------chHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            999998644332  2      224788889999999999999987444444433

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.92  E-value=2.7e-05  Score=58.91  Aligned_cols=41  Identities=17%  Similarity=0.307  Sum_probs=36.6

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK   47 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~   47 (348)
                      +...++||.|.||.|.+|+.+++.|.++||+|.+.+|+...
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            45567899999999999999999999999999999997643

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=3e-05  Score=57.94  Aligned_cols=70  Identities=14%  Similarity=-0.040  Sum_probs=42.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC----CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG----YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      |+||.|.||||++|+.+++.|+++.    .+++.+.++..........    .-.....++.+.+    .++++|++|-+
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~----~~~~~~~~~~~~~----~~~~~DivF~a   72 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG----GTTGTLQDAFDLE----ALKALDIIVTC   72 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG----TCCCBCEETTCHH----HHHTCSEEEEC
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc----CCceeeecccchh----hhhcCcEEEEe
Confidence            5799999999999999999888763    3566666554332111100    0011122222322    34689999988


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      ++
T Consensus        73 ~~   74 (146)
T d1t4ba1          73 QG   74 (146)
T ss_dssp             SC
T ss_pred             cC
Confidence            75

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.89  E-value=3.6e-06  Score=66.76  Aligned_cols=37  Identities=22%  Similarity=0.236  Sum_probs=34.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      |||.|+||+|.+|++|++.|+++||+|++.+|++.+.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~   37 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKA   37 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            5799999999999999999999999999999987654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.88  E-value=2.9e-05  Score=58.80  Aligned_cols=74  Identities=19%  Similarity=0.264  Sum_probs=58.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a   87 (348)
                      +.+|+|.|. |-+|..+++.|.+.|++|++++.++.+.  .....  ...++.++.||.+|++.+.++ ++.++.||-+.
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~--~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR--LGDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH--HCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHh--hcCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            457999997 9999999999999999999999877532  11111  124789999999999998775 56789998764

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.87  E-value=6.4e-06  Score=61.58  Aligned_cols=107  Identities=11%  Similarity=0.106  Sum_probs=67.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc--ccccccC----CCCCeEEE-EccCCCcchHHHhhcCCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL--QIFSKWT----RSDRLRLF-QADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~~~~~----~~~~~~~~-~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      +||.|+|+ |.+|+.++..|+.++. ++.+++.++...  ....+..    .....++. ..|.       +.++++|+|
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~-------~~~~~advv   73 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-------ADTANSDVI   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-------GGGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH-------HHhcCCCEE
Confidence            58999996 9999999999988774 888898877643  1111110    01112222 1222       235689999


Q ss_pred             EEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEE
Q 035965           84 FHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL  134 (348)
Q Consensus        84 ih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  134 (348)
                      |-+|+......  .      ...+.+..|+.-.+.+++...+.++...++.
T Consensus        74 vitag~~~~~~--~------~r~dl~~~N~~i~~~i~~~i~k~~p~aiviv  116 (142)
T d1uxja1          74 VVTSGAPRKPG--M------SREDLIKVNADITRACISQAAPLSPNAVIIM  116 (142)
T ss_dssp             EECCSCC-----------------CHHHHHHHHHHHHHHHGGGCTTCEEEE
T ss_pred             EEeeeccCCcC--c------chhHHHhHHHHHHHHHHHHHhccCCCceEEE
Confidence            99999654322  1      2237788999999999999999873444444

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.82  E-value=6.2e-05  Score=53.30  Aligned_cols=67  Identities=13%  Similarity=0.060  Sum_probs=54.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vi   84 (348)
                      ...||.|.|| |.+|+-++....+.|++|++++.+++.. ...       .-+++.+|+.|.+.+.++.+  .+|+|-
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-------a~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV-------AHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-------SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-------CCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            4568999996 9999999999999999999999876543 111       23678899999999988764  578885

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.82  E-value=5.9e-06  Score=62.81  Aligned_cols=115  Identities=16%  Similarity=0.003  Sum_probs=68.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-----C--eEEEEEcCCCccccccc----c-CCCCCeEEEEccCCCcchHHHhh
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-----Y--IVHATVRDPGKLQIFSK----W-TRSDRLRLFQADLQVEGSFDKAV   77 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-----~--~V~~~~r~~~~~~~~~~----~-~~~~~~~~~~~Dl~d~~~~~~~~   77 (348)
                      +++||.|+||+|.+|++++..|+..+     .  +++.++.+........+    . ........+..    .....+.+
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~   77 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA----TDKEEIAF   77 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE----ESCHHHHT
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc----Cccccccc
Confidence            35799999999999999999998653     2  23444433321111111    0 01112222222    12345677


Q ss_pred             cCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcc-eEEEec
Q 035965           78 MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVK-RVVLTS  136 (348)
Q Consensus        78 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~v~~S  136 (348)
                      +++|+||-++|......  .      .+...+..|+.-.+.+.+...+..+.. .+|.+|
T Consensus        78 ~~~dvVVitag~~~~~g--~------sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          78 KDLDVAILVGSMPRRDG--M------ERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             TTCSEEEECCSCCCCTT--C------CTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CCceEEEEecccCCCCC--C------chhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            89999999998754433  1      223778999999999999987753233 344444

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.82  E-value=0.00016  Score=54.19  Aligned_cols=115  Identities=9%  Similarity=0.065  Sum_probs=71.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc--ccccccC----CCCCeEEEEccCCCcchHHHhhcCCCEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL--QIFSKWT----RSDRLRLFQADLQVEGSFDKAVMGCDGVF   84 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~--~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   84 (348)
                      +||.|.|+ |.+|++++..|..++ .++.++++++.+.  ....+..    ..........+  +    .+.++++|+|+
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~----~~~~~~advvv   76 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T----YDDLAGADVVI   76 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C----GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c----ccccCCCcEEE
Confidence            58999996 999999998777776 3888888877543  1111110    01112222211  1    23456899999


Q ss_pred             EccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           85 HVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        85 h~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      -+++..........   ++.....+..|+.-.+.+.+.+++.++-..++.+|
T Consensus        77 itag~~~~~g~~~~---~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          77 VTAGFTKAPGKSDK---EWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             ECCSCSSCTTCCST---TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EecccccCCCCCcc---ccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            99996543321111   01234778999999999999999988444444433

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.73  E-value=5.3e-05  Score=57.98  Aligned_cols=71  Identities=15%  Similarity=0.099  Sum_probs=47.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |||+|.|+ |-+|+.++..|.+.|++|.+++|++.+. ........ ...........    ....+..+|+||.+.-
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~D~iii~vk   72 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETD-GSIFNESLTAN----DPDFLATSDLLLVTLK   72 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTT-SCEEEEEEEES----CHHHHHTCSEEEECSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCC-ccccccccccc----hhhhhcccceEEEeec
Confidence            68999998 9999999999999999999999987655 22221111 11111111111    2234457899998754

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.72  E-value=6.8e-05  Score=58.35  Aligned_cols=75  Identities=23%  Similarity=0.173  Sum_probs=50.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccccc---CCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKW---TRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |||.|.|| |-+|..++..|.++||+|.+++|++.+. .+....   ...+..+..........+..++++++|+||-+.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            79999998 9999999999999999999999986543 222110   001112222222222234677888999999875

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.66  E-value=7.2e-05  Score=55.78  Aligned_cols=34  Identities=32%  Similarity=0.435  Sum_probs=27.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC---eEEEEEcC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY---IVHATVRD   44 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~---~V~~~~r~   44 (348)
                      +++|.|.||||++|..|++.|.+++|   ++..+..+
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~   38 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA   38 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence            47899999999999999999976654   56655443

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.59  E-value=6.6e-05  Score=59.59  Aligned_cols=77  Identities=25%  Similarity=0.254  Sum_probs=48.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccccc--CCCCCeE-E-----EEccCCCcchHHHhhcCCCE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKW--TRSDRLR-L-----FQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~--~~~~~~~-~-----~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      |||.|.| .||+|..++..|+++||+|++++.+..+. .+.+..  ...+... .     ....+.-..++.++++++|+
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~   79 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence            6799997 59999999999999999999999876533 222110  0000000 0     00011112345666778999


Q ss_pred             EEEcccc
Q 035965           83 VFHVAAS   89 (348)
Q Consensus        83 Vih~a~~   89 (348)
                      ++.+...
T Consensus        80 i~i~VpT   86 (202)
T d1mv8a2          80 SFICVGT   86 (202)
T ss_dssp             EEECCCC
T ss_pred             EEEecCc
Confidence            9999864

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.57  E-value=4.6e-05  Score=57.92  Aligned_cols=73  Identities=22%  Similarity=0.209  Sum_probs=55.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ..++++|||.|+ |-+|..++++|...|. +++++.|+..++ .+....    +..     ..+.+++.+.+.++|+||.
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~----~~~-----~~~~~~~~~~l~~~Divi~   90 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----GGE-----AVRFDELVDHLARSDVVVS   90 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----TCE-----ECCGGGHHHHHHTCSEEEE
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh----hcc-----cccchhHHHHhccCCEEEE
Confidence            356889999997 9999999999999997 688999987665 333321    122     2234567788889999999


Q ss_pred             ccccC
Q 035965           86 VAASM   90 (348)
Q Consensus        86 ~a~~~   90 (348)
                      +.+..
T Consensus        91 atss~   95 (159)
T d1gpja2          91 ATAAP   95 (159)
T ss_dssp             CCSSS
T ss_pred             ecCCC
Confidence            98754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.57  E-value=0.00011  Score=56.24  Aligned_cols=36  Identities=28%  Similarity=0.359  Sum_probs=32.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      |||.|.|. |.+|+.+++.|.++||+|++++|++...
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~   36 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTC   36 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHH
Confidence            57999986 9999999999999999999999986543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.54  E-value=3.9e-05  Score=59.86  Aligned_cols=74  Identities=19%  Similarity=0.217  Sum_probs=51.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHH---Hhh--cCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFD---KAV--MGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~--~~~d~Vi   84 (348)
                      .+.+|||+||+|.+|...++.....|.+|+++++++.+..+.+..    +...+ .|..+.+..+   +..  +++|+||
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~----Ga~~v-i~~~~~~~~~~~~~~~~~~Gvd~v~  103 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI----GFDAA-FNYKTVNSLEEALKKASPDGYDCYF  103 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCSEE-EETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh----hhhhh-cccccccHHHHHHHHhhcCCCceeE
Confidence            367999999999999999999999999999999987655333222    22211 2333333232   222  3699999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      ++.+
T Consensus       104 D~vG  107 (182)
T d1v3va2         104 DNVG  107 (182)
T ss_dssp             ESSC
T ss_pred             EecC
Confidence            9987

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.51  E-value=7.3e-05  Score=57.64  Aligned_cols=74  Identities=24%  Similarity=0.156  Sum_probs=50.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      .+.+|||+||+|-+|...++.+...|.+|+++++++.+....+..    +.+.+ .|..+........+++|+||++.|
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~l----Ga~~~-i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL----GAEEA-ATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT----TCSEE-EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccccc----cccee-eehhhhhhhhhccccccccccccc
Confidence            357899999999999999999999999999999887655222221    22222 233332222223457999999866

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=0.00021  Score=57.28  Aligned_cols=77  Identities=12%  Similarity=0.072  Sum_probs=54.5

Q ss_pred             CCCCCeEEEeCC----------------CChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcc
Q 035965            8 TGRSKTFCVTGA----------------NGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG   71 (348)
Q Consensus         8 ~~~~~~ilVtGa----------------tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   71 (348)
                      .+++++||||+|                ||-.|.+|++++..+|++|+++.-.....       ....+..+...  ..+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~-------~p~~~~~~~~~--t~~   73 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP-------TPPFVKRVDVM--TAL   73 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-------CCTTEEEEECC--SHH
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC-------cccccccceeh--hhH
Confidence            456789999975                79999999999999999999988644311       11245555433  333


Q ss_pred             hH----HHhhcCCCEEEEccccCccc
Q 035965           72 SF----DKAVMGCDGVFHVAASMEFD   93 (348)
Q Consensus        72 ~~----~~~~~~~d~Vih~a~~~~~~   93 (348)
                      ++    .+.+.++|++|++||...+.
T Consensus        74 ~m~~~~~~~~~~~D~~i~aAAvsDf~   99 (223)
T d1u7za_          74 EMEAAVNASVQQQNIFIGCAAVADYR   99 (223)
T ss_dssp             HHHHHHHHHGGGCSEEEECCBCCSEE
T ss_pred             HHHHHHHhhhccceeEeeeechhhhh
Confidence            33    33456899999999986553

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.48  E-value=0.00059  Score=46.46  Aligned_cols=73  Identities=16%  Similarity=0.135  Sum_probs=51.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ..++|+|+|.|. |-.|..+++.|.++|++|++.+.+........+.   ....+..+...     ...+.++|.||-..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~d~vi~SP   72 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP---EAVERHTGSLN-----DEWLMAADLIVASP   72 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSC---TTSCEEESBCC-----HHHHHHCSEEEECT
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHh---hccceeecccc-----hhhhccCCEEEECC
Confidence            346789999997 9999999999999999999999866533111111   24445555432     12345789999887


Q ss_pred             cc
Q 035965           88 AS   89 (348)
Q Consensus        88 ~~   89 (348)
                      |.
T Consensus        73 Gi   74 (93)
T d2jfga1          73 GI   74 (93)
T ss_dssp             TS
T ss_pred             CC
Confidence            75

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=8.3e-05  Score=48.63  Aligned_cols=39  Identities=33%  Similarity=0.363  Sum_probs=35.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      ..++|||+||+|-+|+..++.+...|++|+++++++++.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~   69 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH   69 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence            357899999999999999999888999999999987654

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=0.0001  Score=56.93  Aligned_cols=74  Identities=19%  Similarity=0.145  Sum_probs=51.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHh---h--cCCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKA---V--MGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~--~~~d~Vi   84 (348)
                      .+.+|||+||+|-+|...++.+...|.+|+++++++.+....+..    +... ..|.++.+..+++   .  +++|+||
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~----Ga~~-vi~~~~~~~~~~i~~~t~~~g~d~v~  102 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN----GAHE-VFNHREVNYIDKIKKYVGEKGIDIII  102 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT----TCSE-EEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccccc----Cccc-ccccccccHHHHhhhhhccCCceEEe
Confidence            357899999999999999999999999999999876544222221    2221 2355554433332   2  2589999


Q ss_pred             Eccc
Q 035965           85 HVAA   88 (348)
Q Consensus        85 h~a~   88 (348)
                      ++.+
T Consensus       103 d~~g  106 (174)
T d1yb5a2         103 EMLA  106 (174)
T ss_dssp             ESCH
T ss_pred             eccc
Confidence            9876

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.37  E-value=0.00066  Score=50.30  Aligned_cols=69  Identities=13%  Similarity=0.048  Sum_probs=39.5

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC-C---eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG-Y---IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |||.|.||||++|..|++.|++.. |   ++..+..+..........   .. .....+..+.    ..++++|+||-+.
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~---~~-~~~~~~~~~~----~~~~~~DvvF~al   72 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFG---KD-AGMLHDAFDI----ESLKQLDAVITCQ   72 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSS---SC-CCBCEETTCH----HHHTTCSEEEECS
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccC---Cc-ceeeecccch----hhhccccEEEEec
Confidence            579999999999999999888643 3   455444332211111111   01 0011122222    3356899999886


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      .
T Consensus        73 p   73 (147)
T d1mb4a1          73 G   73 (147)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.35  E-value=4.8e-05  Score=59.66  Aligned_cols=79  Identities=16%  Similarity=0.146  Sum_probs=52.3

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccccc---CCCCCeEEEEccCCCcchHHHhhcCCCEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKW---TRSDRLRLFQADLQVEGSFDKAVMGCDGV   83 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   83 (348)
                      .+.|+||.|.|| |-.|++++..|.++||+|.+.+|++... .+....   .-.+++++ .-++.-..++.++++++|+|
T Consensus         4 ~~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~i   81 (189)
T d1n1ea2           4 LLYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEII   81 (189)
T ss_dssp             CCCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCE
T ss_pred             cceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEE
Confidence            455778999997 9999999999999999999999976533 221110   00112211 11122224577888899999


Q ss_pred             EEccc
Q 035965           84 FHVAA   88 (348)
Q Consensus        84 ih~a~   88 (348)
                      |-+..
T Consensus        82 iiavP   86 (189)
T d1n1ea2          82 LFVIP   86 (189)
T ss_dssp             EECSC
T ss_pred             EEcCc
Confidence            88753

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.28  E-value=0.00014  Score=56.34  Aligned_cols=32  Identities=25%  Similarity=0.318  Sum_probs=27.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER-GYIVHATV   42 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~   42 (348)
                      |+||.|.|||||+|..|++.|.+. ..++..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            679999999999999999999886 56775554

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.27  E-value=0.00021  Score=55.15  Aligned_cols=74  Identities=19%  Similarity=0.240  Sum_probs=47.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeE-EEEccCCCcchHHHh-hcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLR-LFQADLQVEGSFDKA-VMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~-~~~~d~Vih~a~   88 (348)
                      +.+|||+||+|-+|+..++.+...|.+|+++++++.+....+..    +.+ .+.-+-.+.+.+... -+++|+||++.+
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~l----Ga~~vi~~~~~~~~~~~~~~~~gvD~vid~vg  107 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL----GAKEVLAREDVMAERIRPLDKQRWAAAVDPVG  107 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT----TCSEEEECC---------CCSCCEEEEEECST
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhc----ccceeeecchhHHHHHHHhhccCcCEEEEcCC
Confidence            56899999999999999999989999999999988776333222    122 221111111112111 136999999987

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.26  E-value=0.00013  Score=56.77  Aligned_cols=73  Identities=18%  Similarity=0.160  Sum_probs=51.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcch---HHHhh--cCCCEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGS---FDKAV--MGCDGVFH   85 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~--~~~d~Vih   85 (348)
                      +.+|||+||+|-+|..+++.+...|.+|+++++++++..+.+..    +... ..|..+.+.   +.+..  +++|+||+
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~----Ga~~-vi~~~~~~~~~~v~~~t~~~g~d~v~d  100 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL----GVEY-VGDSRSVDFADEILELTDGYGVDVVLN  100 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT----CCSE-EEETTCSTHHHHHHHHTTTCCEEEEEE
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeecccccccccccc----cccc-cccCCccCHHHHHHHHhCCCCEEEEEe
Confidence            57899999999999999999988899999999876554333221    2222 234444432   22322  36999999


Q ss_pred             ccc
Q 035965           86 VAA   88 (348)
Q Consensus        86 ~a~   88 (348)
                      +.+
T Consensus       101 ~~g  103 (183)
T d1pqwa_         101 SLA  103 (183)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            887

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.25  E-value=0.00014  Score=56.43  Aligned_cols=73  Identities=16%  Similarity=0.063  Sum_probs=52.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHh---hc--CCCEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKA---VM--GCDGVFH   85 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~~--~~d~Vih   85 (348)
                      +.+|+|+||+|.+|..+++.+...|.+|+++++++.+.++.+..    +.+ ...|..+.+..+++   ..  ++|+|+.
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~l----Ga~-~vi~~~~~d~~~~v~~~t~g~g~d~v~d  103 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA----GAW-QVINYREEDLVERLKEITGGKKVRVVYD  103 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhc----CCe-EEEECCCCCHHHHHHHHhCCCCeEEEEe
Confidence            57999999999999999999988999999999988766222221    222 22355554433332   22  5899999


Q ss_pred             ccc
Q 035965           86 VAA   88 (348)
Q Consensus        86 ~a~   88 (348)
                      +.+
T Consensus       104 ~~g  106 (179)
T d1qora2         104 SVG  106 (179)
T ss_dssp             CSC
T ss_pred             Ccc
Confidence            886

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.00034  Score=54.33  Aligned_cols=81  Identities=15%  Similarity=0.087  Sum_probs=60.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-cccccc---CCCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKW---TRSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      ..+.++|+|.|+ |..|+.++.+|.+.|. +++++.|++.+. ....+.   ...........|+.+.+.+...+..+|+
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            456789999997 9999999999999986 788889987644 222111   1111344567888888888888889999


Q ss_pred             EEEcccc
Q 035965           83 VFHVAAS   89 (348)
Q Consensus        83 Vih~a~~   89 (348)
                      |||+...
T Consensus        94 iIN~Tp~  100 (182)
T d1vi2a1          94 LTNGTKV  100 (182)
T ss_dssp             EEECSST
T ss_pred             eccccCC
Confidence            9999765

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.17  E-value=0.00067  Score=52.43  Aligned_cols=76  Identities=17%  Similarity=0.149  Sum_probs=49.5

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---ccccccC-CCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSKWT-RSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |||.|.|| |-.|+.|+..|.++|++|.+..|..++.   .+..... ..-.......++.-..++.++++++|+||.+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            68999997 9999999999999999999999854321   1111000 00001111112223456788899999999875


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      .
T Consensus        80 p   80 (180)
T d1txga2          80 S   80 (180)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.17  E-value=0.00038  Score=53.21  Aligned_cols=75  Identities=21%  Similarity=0.075  Sum_probs=51.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccccC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAASM   90 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~~   90 (348)
                      +.+|+|+|+ |.+|...++.+...|.+|+++++++.+....+..    +.+.+.-...+.+......+++|+|+.+.+..
T Consensus        28 g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~l----Ga~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          28 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKM----GADHYIATLEEGDWGEKYFDTFDLIVVCASSL  102 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCSEEEEGGGTSCHHHHSCSCEEEEEECCSCS
T ss_pred             CCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhcc----CCcEEeeccchHHHHHhhhcccceEEEEecCC
Confidence            578999997 9999999998888899999999988766322221    22222211223334445556799999987643

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.16  E-value=0.00011  Score=56.29  Aligned_cols=38  Identities=34%  Similarity=0.420  Sum_probs=34.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      +..|||+||+|-+|...++.....|.+|+++++++.+.
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~   61 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA   61 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHH
Confidence            45799999999999999998888899999999988776

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.15  E-value=0.00042  Score=53.03  Aligned_cols=75  Identities=21%  Similarity=0.184  Sum_probs=49.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCC--CcchHHHhh-----cCCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQ--VEGSFDKAV-----MGCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~--d~~~~~~~~-----~~~d~V   83 (348)
                      +.+|+|+| +|-+|...++.+...|.+|+++++++.+.++.+...  .. ..+..|-.  +...+.+.+     .++|+|
T Consensus        27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~g--a~-~~~~~~~~~~~~~~~~~~~~~~~g~g~D~v  102 (170)
T d1e3ja2          27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCG--AD-VTLVVDPAKEEESSIIERIRSAIGDLPNVT  102 (170)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--CS-EEEECCTTTSCHHHHHHHHHHHSSSCCSEE
T ss_pred             CCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcC--Cc-EEEeccccccccchhhhhhhcccccCCcee
Confidence            46899997 699999999999999999999999877652222110  11 22333332  222332322     358999


Q ss_pred             EEcccc
Q 035965           84 FHVAAS   89 (348)
Q Consensus        84 ih~a~~   89 (348)
                      |.+++.
T Consensus       103 id~~g~  108 (170)
T d1e3ja2         103 IDCSGN  108 (170)
T ss_dssp             EECSCC
T ss_pred             eecCCC
Confidence            999873

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.11  E-value=0.0018  Score=45.65  Aligned_cols=71  Identities=14%  Similarity=0.177  Sum_probs=51.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ..++++|+|.|| |-+|..-++.|++.|.+|++++....+. ....   ...++++...+..+.     .+++++.|+.+
T Consensus         9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~---~~~~i~~~~~~~~~~-----dl~~~~lv~~a   79 (113)
T d1pjqa1           9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWA---NEGMLTLVEGPFDET-----LLDSCWLAIAA   79 (113)
T ss_dssp             CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHH---TTTSCEEEESSCCGG-----GGTTCSEEEEC
T ss_pred             EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHH---hcCCceeeccCCCHH-----HhCCCcEEeec
Confidence            456899999997 9999999999999999999998766544 1111   124677777666542     25577888865


Q ss_pred             c
Q 035965           87 A   87 (348)
Q Consensus        87 a   87 (348)
                      .
T Consensus        80 t   80 (113)
T d1pjqa1          80 T   80 (113)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.11  E-value=0.00028  Score=51.42  Aligned_cols=69  Identities=17%  Similarity=0.164  Sum_probs=53.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHh-hcCCCEEEEcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKA-VMGCDGVFHVA   87 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~Vih~a   87 (348)
                      |+|+|.|. |-+|..+++.|  +|++|.+++.++........    .++.++.||.++++.|.++ +++++.++-+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~----~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLR----SGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH----TTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh----cCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            57999996 88999999998  46788888887765522221    3789999999999988875 56788888653

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.06  E-value=0.00024  Score=54.56  Aligned_cols=33  Identities=24%  Similarity=0.236  Sum_probs=26.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER-GYIVHATVR   43 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r   43 (348)
                      |+||.|.||||++|..|++.|.+. ..++..+..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s   34 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSS   34 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeec
Confidence            679999999999999999998875 346665543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.04  E-value=0.00028  Score=53.68  Aligned_cols=65  Identities=22%  Similarity=0.283  Sum_probs=47.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |++|.|.| .|-+|+.+++.|+++||+|.+.+|++.+. .+....            .....+..++++.+|+|+-+..
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~------------~~~~~~~~e~~~~~diii~~v~   66 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG------------ASAARSARDAVQGADVVISMLP   66 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT------------CEECSSHHHHHTSCSEEEECCS
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhh------------ccccchhhhhccccCeeeeccc
Confidence            57899998 59999999999999999999999987654 222211            0111245567778898887764

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.00052  Score=52.53  Aligned_cols=74  Identities=14%  Similarity=0.130  Sum_probs=50.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ..++|+|+|.|+ |..+++++..|.+.|.+|+++.|+..+. .+.+.......++.  .++.+.     ....+|+|||+
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~--~~~~~~-----~~~~~dliIN~   86 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA--LSMDEL-----EGHEFDLIINA   86 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE--CCSGGG-----TTCCCSEEEEC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccc--cccccc-----cccccceeecc
Confidence            346789999997 9999999999999999999999987765 33322211112222  222221     12468999999


Q ss_pred             ccc
Q 035965           87 AAS   89 (348)
Q Consensus        87 a~~   89 (348)
                      ...
T Consensus        87 Tp~   89 (170)
T d1nyta1          87 TSS   89 (170)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            754

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.93  E-value=0.0012  Score=49.30  Aligned_cols=64  Identities=16%  Similarity=0.184  Sum_probs=45.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |||.|.| .|-+|+.+++.|+++|++|++.++++.+. .....     ++.+       .++..++++.+|+||-+..
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~-----~~~~-------~~~~~e~~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR-----TVGV-------TETSEEDVYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH-----HHTC-------EECCHHHHHTSSEEEECSC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh-----cccc-------cccHHHHHhhcCeEEEEec
Confidence            5799998 59999999999999999999998876654 22211     1111       1124566778999997753

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.92  E-value=0.0003  Score=54.24  Aligned_cols=38  Identities=34%  Similarity=0.359  Sum_probs=34.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      +.+|||+||+|-+|...++.....|.+|+++++++.+.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~   69 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH   69 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH
Confidence            34899999999999999999999999999999988766

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.88  E-value=0.0066  Score=43.70  Aligned_cols=88  Identities=19%  Similarity=0.116  Sum_probs=59.2

Q ss_pred             CCCeEEEeCCC---ChhHHHHHHHHHHCC-CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           10 RSKTFCVTGAN---GYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        10 ~~~~ilVtGat---GfiG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      .+++|+|.|||   |-.|..+.+.|.+.| ++|+.+..+....  .       ++. ..-++.|      +-..+|.++-
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i--~-------G~~-~y~sl~d------lp~~vDlvvi   70 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV--Q-------GVK-AYKSVKD------IPDEIDLAII   70 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE--T-------TEE-CBSSTTS------CSSCCSEEEE
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc--C-------CeE-eecchhh------cCCCCceEEE
Confidence            56899999998   999999999987765 6888887654321  1       111 1122332      2236788886


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccc
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSV  138 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~  138 (348)
                      +..               +         ..+..+++.|.+.| ++.++.+|+.
T Consensus        71 ~vp---------------~---------~~~~~~~~~~~~~g-~~~~vi~s~G   98 (129)
T d2csua1          71 VVP---------------K---------RFVKDTLIQCGEKG-VKGVVIITAG   98 (129)
T ss_dssp             CSC---------------H---------HHHHHHHHHHHHHT-CCEEEECCCS
T ss_pred             ecC---------------h---------HHhHHHHHHHHHcC-CCEEEEeccc
Confidence            643               1         12456888888889 8888888774

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.86  E-value=0.001  Score=47.38  Aligned_cols=36  Identities=28%  Similarity=0.278  Sum_probs=32.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .+++++|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            3689999998 99999999999999999999998764

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.83  E-value=0.00032  Score=54.45  Aligned_cols=34  Identities=26%  Similarity=0.518  Sum_probs=27.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEE
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER-GYIVHATV   42 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~   42 (348)
                      .++.||.|.||||++|..|++.|.+. ..++..+.
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            34678999999999999999999875 34665554

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.80  E-value=0.001  Score=50.72  Aligned_cols=73  Identities=16%  Similarity=0.101  Sum_probs=52.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      +.+|+|.|+ |-+|...++.+...|.+++++++++.+..+.+..    +.+ ...|..+.+......+++|++|.+.+.
T Consensus        31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~l----Gad-~~i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL----GAD-EVVNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TCS-EEEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhcc----CCc-EEEECchhhHHHHhcCCCceeeeeeec
Confidence            578999986 8999999999988999999999877654222221    222 224555655555556789999999873

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.80  E-value=0.00053  Score=51.99  Aligned_cols=64  Identities=19%  Similarity=0.361  Sum_probs=47.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |||-|.|- |-+|+.+++.|+++||+|++.+|++.+. .+...     ....       ..+..++++++|+||-+..
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~-----~~~~-------~~~~~e~~~~~d~ii~~v~   65 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-----GAET-------ASTAKAIAEQCDVIITMLP   65 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-----TCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHh-----hhhh-------cccHHHHHhCCCeEEEEcC
Confidence            57999985 9999999999999999999999987755 33321     1111       1245666778899987753

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.77  E-value=0.0011  Score=47.41  Aligned_cols=35  Identities=26%  Similarity=0.319  Sum_probs=32.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .++|+|.|| ||+|..++..|.++|.+|+++.+.+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            578999997 99999999999999999999998764

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.74  E-value=0.0012  Score=50.44  Aligned_cols=75  Identities=13%  Similarity=0.119  Sum_probs=51.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ....++|+|.|+ |..|+.++..|.+.+.+|+++.|+.++. .+.........+.....|-.       .+..+|+||++
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN~   86 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVINA   86 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEEC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-------cccccceeeec
Confidence            346789999996 8899999999998888999999987665 33332222223444443322       24578999999


Q ss_pred             cccC
Q 035965           87 AASM   90 (348)
Q Consensus        87 a~~~   90 (348)
                      ....
T Consensus        87 tp~g   90 (171)
T d1p77a1          87 TSAG   90 (171)
T ss_dssp             CCC-
T ss_pred             cccc
Confidence            7653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.72  E-value=0.0013  Score=47.11  Aligned_cols=36  Identities=22%  Similarity=0.243  Sum_probs=33.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .+++++|.|| |+||..++..|.+.|.+|+++.+.+.
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            4689999997 99999999999999999999999764

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.72  E-value=0.00069  Score=51.78  Aligned_cols=36  Identities=19%  Similarity=0.451  Sum_probs=30.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCCCc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDPGK   47 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~~~   47 (348)
                      ||+|+|.|. |.+|+.+++.|.+.|+  +|+++++++..
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~   38 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPES   38 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence            578999985 9999999999999986  78888887653

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.70  E-value=0.0015  Score=46.87  Aligned_cols=36  Identities=22%  Similarity=0.245  Sum_probs=32.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      ..++|+|.|| ||+|..++..|.+.|.+|+++.+.+.
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            3579999997 99999999999999999999998653

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.68  E-value=0.0011  Score=47.28  Aligned_cols=35  Identities=26%  Similarity=0.331  Sum_probs=32.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      +++|+|.|| |++|-.++..|.+.|.+|+++.|.+.
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            579999998 99999999999999999999998753

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.66  E-value=0.0013  Score=46.77  Aligned_cols=35  Identities=29%  Similarity=0.260  Sum_probs=32.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      +++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            579999997 99999999999999999999999764

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.65  E-value=0.00068  Score=50.83  Aligned_cols=64  Identities=16%  Similarity=0.087  Sum_probs=46.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |||.|.|+ |-+|+++++.|++.|++|++.+|+..+. .+.+..    ++.+       ..+..++++.+|+||-+.
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~----g~~~-------~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL----ALPY-------AMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH----TCCB-------CSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc----ceee-------echhhhhhhccceeeeec
Confidence            57999985 9999999999999999999999987655 332221    1111       124566677899999764

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.00095  Score=52.10  Aligned_cols=37  Identities=19%  Similarity=0.194  Sum_probs=34.0

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      |+-+||.|.|| |.+|+.++..++..|++|+++++++.
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTED   38 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChH
Confidence            45689999998 99999999999999999999999875

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.64  E-value=0.002  Score=45.91  Aligned_cols=36  Identities=25%  Similarity=0.116  Sum_probs=32.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .+++++|.|| |+||-.++..|.+.|.+|+++.+...
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            4689999997 99999999999999999999998764

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.64  E-value=0.0011  Score=51.58  Aligned_cols=72  Identities=19%  Similarity=0.126  Sum_probs=45.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEE-EEcCCCcc-ccccccCCCCCeEEEEccCCCcchH---HHhh-cCCCEEEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHA-TVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSF---DKAV-MGCDGVFH   85 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~-~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~---~~~~-~~~d~Vih   85 (348)
                      .+|||+||+|-+|+..++.+...|.++++ ++.++.+. .+....    +.+ ...|..+.+..   .++. +++|+||+
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~----gad-~vi~~~~~~~~~~~~~~~~~GvDvv~D  106 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL----GFD-AAVNYKTGNVAEQLREACPGGVDVYFD  106 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS----CCS-EEEETTSSCHHHHHHHHCTTCEEEEEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc----cce-EEeeccchhHHHHHHHHhccCceEEEe
Confidence            67999999999999999998888976544 45544333 222111    111 33344443322   2222 26999999


Q ss_pred             ccc
Q 035965           86 VAA   88 (348)
Q Consensus        86 ~a~   88 (348)
                      +.+
T Consensus       107 ~vG  109 (187)
T d1vj1a2         107 NVG  109 (187)
T ss_dssp             SSC
T ss_pred             cCC
Confidence            986

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.60  E-value=0.0017  Score=49.03  Aligned_cols=87  Identities=22%  Similarity=0.288  Sum_probs=52.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEE-cCCCcc---ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER-GYIVHATV-RDPGKL---QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~-r~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      .+||+|.|++|-+|+.+++.+.+. +.++.+.. |.....   .........+      .++.-..++..+++.+|+||.
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~------~~~~~~~~~~~~~~~~DViID   77 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGK------TGVTVQSSLDAVKDDFDVFID   77 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSC------CSCCEESCSTTTTTSCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhcccc------CCceeeccHHHHhcccceEEE
Confidence            568999999999999999998876 66775544 432211   1110000000      011111223445668999998


Q ss_pred             ccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC
Q 035965           86 VAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE  127 (348)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~  127 (348)
                      +..               |         .++...++.|.+.+
T Consensus        78 Fs~---------------p---------~~~~~~~~~a~~~~   95 (162)
T d1diha1          78 FTR---------------P---------EGTLNHLAFCRQHG   95 (162)
T ss_dssp             CSC---------------H---------HHHHHHHHHHHHTT
T ss_pred             ecc---------------H---------HHHHHHHHHHHhcc
Confidence            853               2         23556888888888

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.0071  Score=45.88  Aligned_cols=74  Identities=16%  Similarity=0.100  Sum_probs=50.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCe-EEEEccCCCcchHHHhh-----cCCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRL-RLFQADLQVEGSFDKAV-----MGCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~-----~~~d~V   83 (348)
                      +.+|+|+|+ |-+|...++.+...|. +|+++++++.+..+.+..    +. .++..+-.+.....+.+     .++|+|
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~----Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvv  101 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI----GADLVLQISKESPQEIARKVEGQLGCKPEVT  101 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCSEEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHh----CCcccccccccccccccccccccCCCCceEE
Confidence            468999986 9999999999999998 799999887655332221    22 23334444444333333     268999


Q ss_pred             EEcccc
Q 035965           84 FHVAAS   89 (348)
Q Consensus        84 ih~a~~   89 (348)
                      |.+.+.
T Consensus       102 id~~G~  107 (171)
T d1pl8a2         102 IECTGA  107 (171)
T ss_dssp             EECSCC
T ss_pred             EeccCC
Confidence            999873

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.58  E-value=0.0057  Score=40.79  Aligned_cols=68  Identities=13%  Similarity=0.025  Sum_probs=45.9

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcccc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAAS   89 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~~   89 (348)
                      |||-+.|-.|-==+.|++.|.++|++|.+.|+..+..  .+..     .++.++.+  .+++.    ++++|.||...|.
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~-----~Gi~i~~g--h~~~~----i~~~d~vV~SsAI   70 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRK-----LGIPIFVP--HSADN----WYDPDLVIKTPAV   70 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-----TTCCEESS--CCTTS----CCCCSEEEECTTC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHH-----CCCeEEee--ecccc----cCCCCEEEEecCc
Confidence            5788888644333478999999999999999986544  3222     25665543  22222    3578999988876


Q ss_pred             C
Q 035965           90 M   90 (348)
Q Consensus        90 ~   90 (348)
                      .
T Consensus        71 ~   71 (89)
T d1j6ua1          71 R   71 (89)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.58  E-value=0.013  Score=39.70  Aligned_cols=72  Identities=19%  Similarity=0.288  Sum_probs=48.1

Q ss_pred             CCCCCeEEEeCCCChhH-HHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            8 TGRSKTFCVTGANGYIG-SWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG-~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ..+.++|.+.|- |.+| +.|++.|.++|++|.+.|+..... .....    .++.+..+.-.+      .++++|.||.
T Consensus         5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~----~Gi~v~~g~~~~------~i~~~d~vV~   73 (96)
T d1p3da1           5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ----AGAKIYIGHAEE------HIEGASVVVV   73 (96)
T ss_dssp             CTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH----TTCEEEESCCGG------GGTTCSEEEE
T ss_pred             chhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH----CCCeEEECCccc------cCCCCCEEEE
Confidence            345678888876 4444 778999999999999999976544 22211    256655543221      2357899998


Q ss_pred             ccccC
Q 035965           86 VAASM   90 (348)
Q Consensus        86 ~a~~~   90 (348)
                      ..|..
T Consensus        74 S~AI~   78 (96)
T d1p3da1          74 SSAIK   78 (96)
T ss_dssp             CTTSC
T ss_pred             CCCcC
Confidence            87753

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.54  E-value=0.0016  Score=46.06  Aligned_cols=36  Identities=25%  Similarity=0.261  Sum_probs=32.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .+++++|.|| |++|-.++..|.+.|++|+++.+.+.
T Consensus        20 ~p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          20 LPQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            3689999997 99999999999999999999998753

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.51  E-value=0.002  Score=46.15  Aligned_cols=34  Identities=26%  Similarity=0.200  Sum_probs=31.1

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRD   44 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~   44 (348)
                      .+++++|.|| |+||..++..|.+.|.+|+++.|+
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            4578999997 999999999999999999999875

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.50  E-value=0.0014  Score=49.92  Aligned_cols=74  Identities=16%  Similarity=0.211  Sum_probs=49.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhh-----cCCCEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAV-----MGCDGVF   84 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~d~Vi   84 (348)
                      +.+|+|+|++|-+|...++.+...| .+|+++++++.+..+.+..    +.+ ...|..+.+..++..     +++|+||
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~----Ga~-~~i~~~~~~~~~~~~~~~~~~~~d~vi  102 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----GAD-YVINASMQDPLAEIRRITESKGVDAVI  102 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----TCS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHc----CCc-eeeccCCcCHHHHHHHHhhcccchhhh
Confidence            4689999999999999999998888 4888999877655332221    222 122333333333332     2589999


Q ss_pred             Ecccc
Q 035965           85 HVAAS   89 (348)
Q Consensus        85 h~a~~   89 (348)
                      .+++.
T Consensus       103 d~~g~  107 (170)
T d1jvba2         103 DLNNS  107 (170)
T ss_dssp             ESCCC
T ss_pred             ccccc
Confidence            99873

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.0019  Score=46.52  Aligned_cols=35  Identities=23%  Similarity=0.286  Sum_probs=32.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      +++++|.|| |+||-.++..|.+.|.+|+++.|.+.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            579999997 99999999999999999999999763

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.48  E-value=0.012  Score=43.74  Aligned_cols=24  Identities=38%  Similarity=0.563  Sum_probs=21.5

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY   36 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~   36 (348)
                      ||.|.||||++|..|++.|.+..+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            799999999999999998877654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.45  E-value=0.0051  Score=47.19  Aligned_cols=63  Identities=21%  Similarity=0.223  Sum_probs=49.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ..+++|.|.|. |-||+.+++.|..-|.+|++.+|.+.+.                 +..-.+++.+++..+|+|+.+..
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~-----------------~~~~~~~l~ell~~sDiv~~~~p  101 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEG-----------------PWRFTNSLEEALREARAAVCALP  101 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCS-----------------SSCCBSCSHHHHTTCSEEEECCC
T ss_pred             ccCceEEEecc-ccccccceeeeecccccccccccccccc-----------------ceeeeechhhhhhccchhhcccc
Confidence            56889999996 9999999999999999999999876432                 11112356788899999987664


Q ss_pred             c
Q 035965           89 S   89 (348)
Q Consensus        89 ~   89 (348)
                      .
T Consensus       102 l  102 (181)
T d1qp8a1         102 L  102 (181)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.44  E-value=0.0011  Score=50.84  Aligned_cols=73  Identities=15%  Similarity=0.094  Sum_probs=48.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCeEEEEccCCCcc---hHHHhhc--CCCEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG---SFDKAVM--GCDGVF   84 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~--~~d~Vi   84 (348)
                      +.+|+|.|+ |-+|...++.+...|. +|+++++++.+....+..    +.. ...|..+.+   .+.+...  ++|+||
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~l----Ga~-~~i~~~~~~~~~~v~~~t~g~G~D~vi  101 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFY----GAT-DILNYKNGHIEDQVMKLTNGKGVDRVI  101 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHH----TCS-EEECGGGSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhh----Ccc-ccccccchhHHHHHHHHhhccCcceEE
Confidence            568999986 9999999999888896 799999877655222221    221 123333332   2333332  599999


Q ss_pred             Ecccc
Q 035965           85 HVAAS   89 (348)
Q Consensus        85 h~a~~   89 (348)
                      .+++.
T Consensus       102 d~~g~  106 (174)
T d1jqba2         102 MAGGG  106 (174)
T ss_dssp             ECSSC
T ss_pred             EccCC
Confidence            99874

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.42  E-value=0.0022  Score=52.03  Aligned_cols=35  Identities=37%  Similarity=0.495  Sum_probs=31.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP   45 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~   45 (348)
                      ..+||+|.|| |..|...+..|.++|++|+++.|..
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3568999997 9999999999999999999999864

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.41  E-value=0.0018  Score=46.40  Aligned_cols=35  Identities=34%  Similarity=0.443  Sum_probs=31.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .++++|.|| |++|-.++..|.+.|++|+++.|.+.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            468999997 99999999999999999999998653

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.39  E-value=0.0059  Score=43.89  Aligned_cols=69  Identities=19%  Similarity=0.199  Sum_probs=47.8

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-----CCCEEEEc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-----GCDGVFHV   86 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~Vih~   86 (348)
                      |||.|.|++|-.|+.|++.+.++|+++.+..-......+.       ..+ +..|++.++...+.++     +..+|+=.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~~~-------~~D-VvIDFS~p~~~~~~l~~~~~~~~p~ViGT   72 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEELD-------SPD-VVIDFSSPEALPKTVDLCKKYRAGLVLGT   72 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEECS-------CCS-EEEECSCGGGHHHHHHHHHHHTCEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHHhc-------cCC-EEEEecCHHHHHHHHHHHHhcCCCEEEEc
Confidence            5799999999999999999999999886553221111111       122 5689999988776654     56667655


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      -|
T Consensus        73 TG   74 (128)
T d1vm6a3          73 TA   74 (128)
T ss_dssp             CS
T ss_pred             CC
Confidence            44

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.37  E-value=0.0028  Score=48.77  Aligned_cols=75  Identities=19%  Similarity=0.190  Sum_probs=48.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCe-EEEEccCCCcchHHH-h---h--cCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRL-RLFQADLQVEGSFDK-A---V--MGCD   81 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~-~---~--~~~d   81 (348)
                      .+.+|||+|+ |-+|...++.+...|. +|+++++++.+.++.+..    +. .++...-.+.....+ +   .  .++|
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~~vi~~~~~~~~~~~~~i~~~~~~~g~D  102 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI----GADLTLNRRETSVEERRKAIMDITHGRGAD  102 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT----TCSEEEETTTSCHHHHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccccccc----cceEEEeccccchHHHHHHHHHhhCCCCce
Confidence            3579999997 9999999999999997 799999987665322221    22 222222222222222 2   2  2589


Q ss_pred             EEEEcccc
Q 035965           82 GVFHVAAS   89 (348)
Q Consensus        82 ~Vih~a~~   89 (348)
                      +||.+++.
T Consensus       103 vvid~vG~  110 (182)
T d1vj0a2         103 FILEATGD  110 (182)
T ss_dssp             EEEECSSC
T ss_pred             EEeecCCc
Confidence            99999874

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.31  E-value=0.0017  Score=50.42  Aligned_cols=37  Identities=14%  Similarity=0.257  Sum_probs=31.2

Q ss_pred             CCeEEE-eCCCChhHHHHHHHHHHCCCeEEEEEcCCCc
Q 035965           11 SKTFCV-TGANGYIGSWLVKTLLERGYIVHATVRDPGK   47 (348)
Q Consensus        11 ~~~ilV-tGatGfiG~~l~~~L~~~g~~V~~~~r~~~~   47 (348)
                      +.+++| +||+|-+|...++.....|.+|++++|+.++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~   66 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN   66 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccc
Confidence            346666 6999999999999988889999999987654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=96.27  E-value=0.003  Score=45.95  Aligned_cols=35  Identities=23%  Similarity=0.309  Sum_probs=32.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .++|+|.|| ||+|..++..|.+.|.+|+++.+.+.
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            579999997 99999999999999999999998764

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.26  E-value=0.0023  Score=48.59  Aligned_cols=66  Identities=12%  Similarity=0.159  Sum_probs=45.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      +.++|+|.|+ |..|++++..|.+.|. +|.++.|+..+. .+....    +...+  +-.+       ..++|+|||+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~----~~~~~--~~~~-------~~~~DliINaT   81 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY----GYAYI--NSLE-------NQQADILVNVT   81 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH----TCEEE--SCCT-------TCCCSEEEECS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh----hhhhh--hccc-------ccchhhheecc
Confidence            4678999997 9999999999999996 799999987765 333221    11211  1111       13689999986


Q ss_pred             cc
Q 035965           88 AS   89 (348)
Q Consensus        88 ~~   89 (348)
                      ..
T Consensus        82 pi   83 (167)
T d1npya1          82 SI   83 (167)
T ss_dssp             ST
T ss_pred             cc
Confidence            54

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=96.22  E-value=0.0023  Score=45.90  Aligned_cols=36  Identities=28%  Similarity=0.239  Sum_probs=33.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .+++++|.|| |+||-.++..|.+.|.+|+++.|.+.
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            3679999997 99999999999999999999999764

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.22  E-value=0.002  Score=49.48  Aligned_cols=36  Identities=28%  Similarity=0.346  Sum_probs=32.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      |||-|.| .|-+|+.+++.|+++||+|.+.+|++.+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            5799998 59999999999999999999999987765

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.22  E-value=0.0033  Score=40.69  Aligned_cols=36  Identities=28%  Similarity=0.327  Sum_probs=32.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGK   47 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~   47 (348)
                      ||+|.|.|| |.+|+-++.+-...|++|++++-+++.
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            579999997 999999999999999999999986653

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.19  E-value=0.0061  Score=45.63  Aligned_cols=59  Identities=19%  Similarity=0.129  Sum_probs=47.2

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+|+|+|.|.+..+|+.|+..|.++|..|+.+.....                         .+.+..+++|+||.++
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~-------------------------~l~~~~~~ADivI~a~   88 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-------------------------NLRHHVENADLLIVAV   88 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-------------------------CHHHHHHHCSEEEECS
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccc-------------------------hhHHHHhhhhHhhhhc
Confidence            456899999999999999999999999999988765432                         2445566789999998


Q ss_pred             ccCc
Q 035965           88 ASME   91 (348)
Q Consensus        88 ~~~~   91 (348)
                      |...
T Consensus        89 G~p~   92 (166)
T d1b0aa1          89 GKPG   92 (166)
T ss_dssp             CCTT
T ss_pred             cCcc
Confidence            8543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.17  E-value=0.0053  Score=46.88  Aligned_cols=73  Identities=11%  Similarity=0.226  Sum_probs=51.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      +.+|-|.|- |-+|+.+++.|+++||+|++.+|++.+. .+..........  .  -....+++.+.+..+|.++-+..
T Consensus         2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~--~--~a~~~~~~~~~~~~~~~ii~~~~   75 (176)
T d2pgda2           2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKV--L--GAHSLEEMVSKLKKPRRIILLVK   75 (176)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSC--E--ECSSHHHHHHHBCSSCEEEECSC
T ss_pred             CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccc--c--chhhhhhhhhhhcccceEEEecC
Confidence            467999995 9999999999999999999999998766 443321111100  0  12344566777778898887753

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=96.13  E-value=0.0033  Score=45.17  Aligned_cols=35  Identities=17%  Similarity=0.180  Sum_probs=32.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      +++++|.|| |+||-.++..|.+.|.+|+++.+.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            679999997 99999999999999999999998764

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.10  E-value=0.0024  Score=47.95  Aligned_cols=79  Identities=15%  Similarity=0.145  Sum_probs=59.3

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      .+.+|+|.|| |-.|..-++.....|-+|.++|.+..+. .+.....  ..++.   -..+.+.+.+.++++|+||-++-
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~--~~~~~---~~~~~~~l~~~~~~aDivI~aal  104 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG--SRVEL---LYSNSAEIETAVAEADLLIGAVL  104 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGSEE---EECCHHHHHHHHHTCSEEEECCC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc--cccee---ehhhhhhHHHhhccCcEEEEeee
Confidence            3569999997 9999999999999999999999987655 3333221  12332   34456778888999999999987


Q ss_pred             cCcccc
Q 035965           89 SMEFDI   94 (348)
Q Consensus        89 ~~~~~~   94 (348)
                      ......
T Consensus       105 ipG~~a  110 (168)
T d1pjca1         105 VPGRRA  110 (168)
T ss_dssp             CTTSSC
T ss_pred             cCCccc
Confidence            655444

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.013  Score=44.07  Aligned_cols=59  Identities=17%  Similarity=0.126  Sum_probs=47.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+|+|+|.|.+..+|+.|+..|+++|..|+.+.....                         .+.+..+++|+||.++
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~-------------------------~l~~~~~~aDivi~a~   90 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA-------------------------HLDEEVNKGDILVVAT   90 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS-------------------------SHHHHHTTCSEEEECC
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccc-------------------------cHHHHHhhccchhhcc
Confidence            457899999999999999999999999999988876543                         2344566788998888


Q ss_pred             ccCc
Q 035965           88 ASME   91 (348)
Q Consensus        88 ~~~~   91 (348)
                      +...
T Consensus        91 G~~~   94 (170)
T d1a4ia1          91 GQPE   94 (170)
T ss_dssp             CCTT
T ss_pred             cccc
Confidence            7643

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0048  Score=46.10  Aligned_cols=69  Identities=20%  Similarity=0.084  Sum_probs=51.3

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ..+.+|+++|.| .|.||+.+++.|...|.+|++++.+|-++ +..             .|-.....+.+++...|+||-
T Consensus        20 ~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-------------~dG~~v~~~~~a~~~adivvt   85 (163)
T d1li4a1          20 VMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA-------------MEGYEVTTMDEACQEGNIFVT   85 (163)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-------------HTTCEECCHHHHTTTCSEEEE
T ss_pred             ceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh-------------cCceEeeehhhhhhhccEEEe
Confidence            345689999999 69999999999999999999999987544 211             122222346677777888887


Q ss_pred             cccc
Q 035965           86 VAAS   89 (348)
Q Consensus        86 ~a~~   89 (348)
                      +.+.
T Consensus        86 aTGn   89 (163)
T d1li4a1          86 TTGC   89 (163)
T ss_dssp             CSSC
T ss_pred             cCCC
Confidence            7664

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.93  E-value=0.016  Score=43.71  Aligned_cols=84  Identities=17%  Similarity=0.073  Sum_probs=54.2

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccC--CCcchHHHhhcCCCEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADL--QVEGSFDKAVMGCDGVF   84 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~~~~~~~~d~Vi   84 (348)
                      ...++|+++|.|-+.-+|+-|+..|+++|..|+.++.+.... +..... ..-......|+  ...+.+.+....+|+||
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~lk~~~~~aDIvI  102 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQK-FTRGES-LKLNKHHVEDLGEYSEDLLKKCSLDSDVVI  102 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEE-EESCCC-SSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccc-cccccc-eeeeeeccccccccchhHHhhccccCCEEE
Confidence            357789999999999999999999999999998877543211 000000 00001112222  22345666677899999


Q ss_pred             EccccCcc
Q 035965           85 HVAASMEF   92 (348)
Q Consensus        85 h~a~~~~~   92 (348)
                      ..++....
T Consensus       103 savG~p~~  110 (171)
T d1edza1         103 TGVPSENY  110 (171)
T ss_dssp             ECCCCTTC
T ss_pred             EccCCCcc
Confidence            99886543

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=95.85  E-value=0.00093  Score=51.06  Aligned_cols=118  Identities=15%  Similarity=0.086  Sum_probs=66.0

Q ss_pred             CeEEEeCCCChhHHH--HHHHHHHC----CCeEEEEEcCCCccc-----cccc-cCCCCCeEEEEccCCCcchHHHhhcC
Q 035965           12 KTFCVTGANGYIGSW--LVKTLLER----GYIVHATVRDPGKLQ-----IFSK-WTRSDRLRLFQADLQVEGSFDKAVMG   79 (348)
Q Consensus        12 ~~ilVtGatGfiG~~--l~~~L~~~----g~~V~~~~r~~~~~~-----~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~   79 (348)
                      |||.|.|| |-+|+.  ++..|+..    +.++..+|+++.+.+     .... .......++..     ..+..+++++
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~-----~td~~eaL~d   76 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK-----TMNLDDVIID   76 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE-----ESCHHHHHTT
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE-----eCChhhcccC
Confidence            68999997 988865  34445533    469999999865431     0000 00112223222     2346678899


Q ss_pred             CCEEEEccccCcccccccc-------------------ccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           80 CDGVFHVAASMEFDINVKD-------------------NIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        80 ~d~Vih~a~~~~~~~~~~~-------------------~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      +|+|+..++.........+                   ..-... .....-|+.-.+.+++..++..+...+|.+|
T Consensus        77 ad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~-~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          77 ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYY-TFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCC-SSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcc-eeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            9999999876433211000                   000000 0112347888888999988887444555443

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.83  E-value=0.0091  Score=45.46  Aligned_cols=74  Identities=16%  Similarity=0.086  Sum_probs=46.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCccccccccCCCCCeEEEE--ccCCCc-chHHHhh--cCCCEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLRLFQ--ADLQVE-GSFDKAV--MGCDGVF   84 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~Dl~d~-~~~~~~~--~~~d~Vi   84 (348)
                      +.+|+|.|+ |.+|...++.+...| .+|+++++++.+..+.+..    +.....  .+..+. .......  .++|+||
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~----Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vi  103 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV----GATECVNPQDYKKPIQEVLTEMSNGGVDFSF  103 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh----CCeeEEecCCchhHHHHHHHHHhcCCCCEEE
Confidence            568999999 668999999998887 5888999888766333221    222221  122221 1222222  3699999


Q ss_pred             Ecccc
Q 035965           85 HVAAS   89 (348)
Q Consensus        85 h~a~~   89 (348)
                      .+.+.
T Consensus       104 d~~G~  108 (176)
T d2jhfa2         104 EVIGR  108 (176)
T ss_dssp             ECSCC
T ss_pred             ecCCc
Confidence            99874

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.80  E-value=0.0065  Score=43.14  Aligned_cols=35  Identities=17%  Similarity=0.016  Sum_probs=32.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            579999997 99999999999999999999999764

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.74  E-value=0.0092  Score=45.59  Aligned_cols=37  Identities=24%  Similarity=0.200  Sum_probs=33.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .++|+|+|.|| |..|-..+..|.++||+|+++.+.+.
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            45789999997 99999999999999999999999764

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.73  E-value=0.054  Score=37.82  Aligned_cols=82  Identities=20%  Similarity=0.291  Sum_probs=53.6

Q ss_pred             CeEEEeCCC---ChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           12 KTFCVTGAN---GYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        12 ~~ilVtGat---GfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      |+|.|.|+|   +-.|..+.+.|++.||+|+.+..+...  ..       +...       ..++.++-+.+|.++-+..
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~--i~-------G~~~-------y~sl~~lp~~~D~vvi~vp   65 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE--IE-------GLKC-------YRSVRELPKDVDVIVFVVP   65 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE--ET-------TEEC-------BSSGGGSCTTCCEEEECSC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc--cc-------Cccc-------cccchhccccceEEEEEeC
Confidence            689999988   789999999999999998887643321  11       1221       1233334346788775533


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEE
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVL  134 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~  134 (348)
                                     +         ..+..+++.|.+.| .+.+++
T Consensus        66 ---------------~---------~~~~~~l~~~~~~g-~k~v~~   86 (116)
T d1y81a1          66 ---------------P---------KVGLQVAKEAVEAG-FKKLWF   86 (116)
T ss_dssp             ---------------H---------HHHHHHHHHHHHTT-CCEEEE
T ss_pred             ---------------H---------HHHHHHHHHHHhcC-CceEEe
Confidence                           1         12446778888888 666554

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.69  E-value=0.045  Score=39.62  Aligned_cols=86  Identities=19%  Similarity=0.125  Sum_probs=56.4

Q ss_pred             CCeEEEeCCC---ChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           11 SKTFCVTGAN---GYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGat---GfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      .++|+|.|+|   +-.|..+++.|.+.||+|+.+..+....  .       +...       ..++.++-..+|.|+-+.
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i--~-------G~~~-------~~sl~dlp~~iD~v~i~v   82 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV--L-------GRKC-------YPSVLDIPDKIEVVDLFV   82 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE--T-------TEEC-------BSSGGGCSSCCSEEEECS
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccccc--C-------CCcc-------cccccccCccceEEEEEe
Confidence            5789999998   8899999999999999988887543211  1       1111       122333334678877664


Q ss_pred             ccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEecc
Q 035965           88 ASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSS  137 (348)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS  137 (348)
                      .               +         ..+..+++.|.+.| ++.+++.++
T Consensus        83 p---------------~---------~~~~~~~~e~~~~g-~k~v~~~~G  107 (139)
T d2d59a1          83 K---------------P---------KLTMEYVEQAIKKG-AKVVWFQYN  107 (139)
T ss_dssp             C---------------H---------HHHHHHHHHHHHHT-CSEEEECTT
T ss_pred             C---------------H---------HHHHHHHHHHHHhC-CCEEEEecc
Confidence            3               1         12446788888888 766665433

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.56  E-value=0.0071  Score=46.66  Aligned_cols=35  Identities=20%  Similarity=0.154  Sum_probs=31.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~   46 (348)
                      ++||+|.|| |..|...+.+|.++|+ +|+++.|++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            689999998 9999999999999998 5999998754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.56  E-value=0.017  Score=43.75  Aligned_cols=78  Identities=19%  Similarity=0.075  Sum_probs=55.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccC----------------------
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADL----------------------   67 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl----------------------   67 (348)
                      +-+|+|.|| |-.|.+-++.....|.+|.++|.+..+. ++..+..     .++..+.                      
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~-----~~i~~~~~~~~~~~~~~gyA~~~s~~~~~  102 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG-----KFITVDDEAMKTAETAGGYAKEMGEEFRK  102 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC-----EECCC-----------------------C
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhc-----ceEEEeccccccccccccchhhcCHHHHH
Confidence            458999998 9999999999999999999999988765 4444321     2221111                      


Q ss_pred             CCcchHHHhhcCCCEEEEccccCcccc
Q 035965           68 QVEGSFDKAVMGCDGVFHVAASMEFDI   94 (348)
Q Consensus        68 ~d~~~~~~~~~~~d~Vih~a~~~~~~~   94 (348)
                      ...+.+.+.+.++|+||-++-......
T Consensus       103 ~~~~~l~~~l~~aDlVI~talipG~~a  129 (183)
T d1l7da1         103 KQAEAVLKELVKTDIAITTALIPGKPA  129 (183)
T ss_dssp             CHHHHHHHHHTTCSEEEECCCCTTSCC
T ss_pred             HHHHHHHHHHHhhhhheeeeecCCccc
Confidence            112345666778999999987655444

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.55  E-value=0.0071  Score=50.87  Aligned_cols=36  Identities=31%  Similarity=0.490  Sum_probs=32.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      ++|||+|.|| |+-|...|..|.++|++|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            3689999997 99999999999999999999998764

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.45  E-value=0.025  Score=43.45  Aligned_cols=66  Identities=18%  Similarity=0.004  Sum_probs=47.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      ...++|.|.| .|.||+.+++.|..-|.+|+..++.......        ..  ..     ..++.++++.+|+|+-++.
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--------~~--~~-----~~~l~ell~~sDii~i~~p  105 (188)
T d1sc6a1          42 ARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG--------NA--TQ-----VQHLSDLLNMSDVVSLHVP  105 (188)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT--------TC--EE-----CSCHHHHHHHCSEEEECCC
T ss_pred             ccceEEEEee-cccchhhhhhhcccccceEeeccccccchhh--------hh--hh-----hhhHHHHHhhccceeeccc
Confidence            4678999998 5999999999999999999999986432200        01  11     1357778888898877665


Q ss_pred             cC
Q 035965           89 SM   90 (348)
Q Consensus        89 ~~   90 (348)
                      ..
T Consensus       106 lt  107 (188)
T d1sc6a1         106 EN  107 (188)
T ss_dssp             SS
T ss_pred             CC
Confidence            43

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=95.44  E-value=0.016  Score=43.98  Aligned_cols=75  Identities=15%  Similarity=0.044  Sum_probs=47.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCe-EEEEccCCCc--chHHHhh--cCCCEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRL-RLFQADLQVE--GSFDKAV--MGCDGV   83 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~Dl~d~--~~~~~~~--~~~d~V   83 (348)
                      .+.+|+|+|+ |-||...++.+...|. +|+++++++.+..+.+..    +. ..+...-.|.  .......  .++|+|
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~----Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~v  102 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL----GATDCLNPRELDKPVQDVITELTAGGVDYS  102 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCSEEECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHh----CCCcccCCccchhhhhhhHhhhhcCCCcEE
Confidence            3578999985 9999999999999997 677888877655333222    22 2222222221  1122222  369999


Q ss_pred             EEcccc
Q 035965           84 FHVAAS   89 (348)
Q Consensus        84 ih~a~~   89 (348)
                      |.+++.
T Consensus       103 ie~~G~  108 (174)
T d1e3ia2         103 LDCAGT  108 (174)
T ss_dssp             EESSCC
T ss_pred             EEeccc
Confidence            999873

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.43  E-value=0.018  Score=43.52  Aligned_cols=66  Identities=15%  Similarity=0.201  Sum_probs=40.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      |++.||.|.| +|++|+.+++.|.+. +.+++++.....+.  .      ........     .+.....+++|+|+.+.
T Consensus         1 M~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~--~------~~~~~~~~-----~~~~~~~~~~D~Vvi~t   66 (170)
T d1f06a1           1 MTNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATL--D------TKTPVFDV-----ADVDKHADDVDVLFLCM   66 (170)
T ss_dssp             CCCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCC--S------SSSCEEEG-----GGGGGTTTTCSEEEECS
T ss_pred             CCcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccc--c------cccccccc-----hhhhhhccccceEEEeC
Confidence            3456899999 599999999999875 67777655433221  0      01111111     12334456799999876


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      .
T Consensus        67 p   67 (170)
T d1f06a1          67 G   67 (170)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.43  E-value=0.016  Score=44.16  Aligned_cols=73  Identities=12%  Similarity=0.021  Sum_probs=48.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCccccccccCCCCCeEEEEccCCCc----chHHHhh--cCCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVE----GSFDKAV--MGCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~--~~~d~V   83 (348)
                      +.+|+|+|+ |-+|...++.+...| .+|+++++++.+.++.+..    +.+.+. |..+.    ..+.+..  .++|+|
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~----GA~~~i-n~~~~~~~~~~~~~~~~g~G~d~v  103 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV----GATECI-SPKDSTKPISEVLSEMTGNNVGYT  103 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH----TCSEEE-CGGGCSSCHHHHHHHHHTSCCCEE
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc----CCcEEE-CccccchHHHHHHHHhccccceEE
Confidence            568999986 999999999999998 5899999988766333322    222221 22222    1222222  369999


Q ss_pred             EEcccc
Q 035965           84 FHVAAS   89 (348)
Q Consensus        84 ih~a~~   89 (348)
                      |.+.+.
T Consensus       104 i~~~g~  109 (176)
T d1d1ta2         104 FEVIGH  109 (176)
T ss_dssp             EECSCC
T ss_pred             EEeCCc
Confidence            999874

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.42  E-value=0.0064  Score=49.75  Aligned_cols=31  Identities=23%  Similarity=0.168  Sum_probs=29.2

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRDP   45 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~   45 (348)
                      |+|.|| |.+|..++.+|+++|++|+++++..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            999997 9999999999999999999999864

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.40  E-value=0.0047  Score=47.72  Aligned_cols=35  Identities=20%  Similarity=0.202  Sum_probs=32.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      -+||.|.|| |.+|+.++..++..|++|+++++++.
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEH   38 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            468999998 99999999999999999999999765

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.39  E-value=0.01  Score=48.08  Aligned_cols=35  Identities=23%  Similarity=0.253  Sum_probs=32.0

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .+||+|.|| |..|..++..|.++|++|+++.|++.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            468999998 99999999999999999999998654

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.39  E-value=0.0077  Score=46.81  Aligned_cols=67  Identities=16%  Similarity=0.009  Sum_probs=48.4

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++|.|.|- |-||+.+++.|..-|.+|++.++........              +.....++.++++.+|+|+.+.
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~--------------~~~~~~~l~~~l~~sDii~~~~  104 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEK--------------KGYYVDSLDDLYKQADVISLHV  104 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHH--------------TTCBCSCHHHHHHHCSEEEECS
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcccccccCccccccccc--------------ceeeeccccccccccccccccC
Confidence            356899999995 9999999999998899999998765422100              1112345777888889887665


Q ss_pred             cc
Q 035965           88 AS   89 (348)
Q Consensus        88 ~~   89 (348)
                      ..
T Consensus       105 pl  106 (197)
T d1j4aa1         105 PD  106 (197)
T ss_dssp             CC
T ss_pred             Cc
Confidence            43

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.39  E-value=0.029  Score=39.65  Aligned_cols=72  Identities=21%  Similarity=0.167  Sum_probs=51.0

Q ss_pred             CCeEEEeCC----------CChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-
Q 035965           11 SKTFCVTGA----------NGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-   78 (348)
Q Consensus        11 ~~~ilVtGa----------tGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   78 (348)
                      .+||||.|+          --+-+.+.+++|.+.|++++.+..++... --..      -..-+..+--..+.+.+.++ 
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d------~aD~lYfePlt~e~v~~Ii~~   80 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE------MADATYIEPIHWEVVRKIIEK   80 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG------GSSEEECSCCCHHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh------hcceeeeecCCHHHHHHHHHH
Confidence            489999998          34789999999999999999999887644 1111      12224444455667777664 


Q ss_pred             -CCCEEEEccc
Q 035965           79 -GCDGVFHVAA   88 (348)
Q Consensus        79 -~~d~Vih~a~   88 (348)
                       ++|.|+-..|
T Consensus        81 E~pd~il~~~G   91 (127)
T d1a9xa3          81 ERPDAVLPTMG   91 (127)
T ss_dssp             HCCSEEECSSS
T ss_pred             hCcCCeEEEee
Confidence             7999885544

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.36  E-value=0.0089  Score=45.48  Aligned_cols=74  Identities=14%  Similarity=0.139  Sum_probs=45.9

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeE-EEEEcCCCccccccccCCCCCeEEEEccCCCcchHHH---hhc-CCCEEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIV-HATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDK---AVM-GCDGVF   84 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---~~~-~~d~Vi   84 (348)
                      .+.+|+|.|+ |.+|...++.+...|.++ +++++++.+..+.+...   -.+++  |..+.+..++   +.. ++|+||
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~G---a~~~i--~~~~~~~~~~i~~~t~gg~D~vi  101 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLG---ATHVI--NSKTQDPVAAIKEITDGGVNFAL  101 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHT---CSEEE--ETTTSCHHHHHHHHTTSCEEEEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcC---CeEEE--eCCCcCHHHHHHHHcCCCCcEEE
Confidence            3568999997 999999999988888765 55566655443322221   12333  3444333332   222 589999


Q ss_pred             Ecccc
Q 035965           85 HVAAS   89 (348)
Q Consensus        85 h~a~~   89 (348)
                      .+.+.
T Consensus       102 d~~G~  106 (174)
T d1f8fa2         102 ESTGS  106 (174)
T ss_dssp             ECSCC
T ss_pred             EcCCc
Confidence            99873

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.28  E-value=0.017  Score=44.61  Aligned_cols=69  Identities=16%  Similarity=0.053  Sum_probs=48.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++|.|.|. |-||+.+++.|..-|.+|++.++.........            ..+....++.++++.+|+|+.+.
T Consensus        46 eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~------------~~~~~~~~l~~ll~~sD~i~~~~  112 (193)
T d1mx3a1          46 RIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERA------------LGLQRVSTLQDLLFHSDCVTLHC  112 (193)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH------------HTCEECSSHHHHHHHCSEEEECC
T ss_pred             eeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhh------------hccccccchhhccccCCEEEEee
Confidence            456889999995 99999999999999999999998654321110            01111235777788888876665


Q ss_pred             cc
Q 035965           88 AS   89 (348)
Q Consensus        88 ~~   89 (348)
                      ..
T Consensus       113 pl  114 (193)
T d1mx3a1         113 GL  114 (193)
T ss_dssp             CC
T ss_pred             cc
Confidence            43

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.19  E-value=0.0019  Score=48.97  Aligned_cols=118  Identities=14%  Similarity=0.073  Sum_probs=62.5

Q ss_pred             CCeEEEeCCCChhHHH-HHHHHHHC-----CCeEEEEEcCCCcccc-cccc-----CCCCCeEEEEccCCCcchHHHhhc
Q 035965           11 SKTFCVTGANGYIGSW-LVKTLLER-----GYIVHATVRDPGKLQI-FSKW-----TRSDRLRLFQADLQVEGSFDKAVM   78 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~-l~~~L~~~-----g~~V~~~~r~~~~~~~-~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~   78 (348)
                      ..||.|.|| |-+|+. ++..|+..     +-++.++|.++.+... ....     ......+....     .+..++++
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~eal~   76 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAFT   76 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHHS
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhccC
Confidence            458999998 445554 55555543     2489999987654310 0000     00112222222     24567788


Q ss_pred             CCCEEEEccccCccccccccccccchhh--------------hhhhhhHHHHHHHHHHHhhcCCcceEEEec
Q 035965           79 GCDGVFHVAASMEFDINVKDNIETYVQS--------------TVINPAIQSTLNLLKACLKSESVKRVVLTS  136 (348)
Q Consensus        79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~--------------~~~~~nv~~~~~ll~~~~~~~~~~~~v~~S  136 (348)
                      ++|+||.+++.........+  +..+..              ....-|+.-.+.+++..++..+-..++.+|
T Consensus        77 ~AD~Vvitag~~~~~g~~rd--~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~T  146 (167)
T d1u8xx1          77 DVDFVMAHIRVGKYAMRALD--EQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYS  146 (167)
T ss_dssp             SCSEEEECCCTTHHHHHHHH--HHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCCEEEECCCcCCCCceeHH--HhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99999999987544331111  000000              001234566677777777777445555544

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.18  E-value=0.041  Score=42.49  Aligned_cols=73  Identities=15%  Similarity=0.066  Sum_probs=47.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCeEEEEccCCCcc---hHHHhhc--CCCEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEG---SFDKAVM--GCDGVF   84 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~--~~d~Vi   84 (348)
                      +.+|+|+|+ |-+|...++.+...|. +|+++++++.+..+.+..    +.+.+ .|-.+.+   .+.++..  ++|++|
T Consensus        26 G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~----Ga~~~-~~~~~~~~~~~i~~~t~g~g~D~vi   99 (195)
T d1kola2          26 GSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----GFEIA-DLSLDTPLHEQIAALLGEPEVDCAV   99 (195)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCEEE-ETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc----cccEE-EeCCCcCHHHHHHHHhCCCCcEEEE
Confidence            568999986 9999888888777775 788888887655333222    33433 2333322   2333333  589999


Q ss_pred             Ecccc
Q 035965           85 HVAAS   89 (348)
Q Consensus        85 h~a~~   89 (348)
                      .+.+.
T Consensus       100 d~vG~  104 (195)
T d1kola2         100 DAVGF  104 (195)
T ss_dssp             ECCCT
T ss_pred             ECccc
Confidence            99884

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.17  E-value=0.0062  Score=45.24  Aligned_cols=36  Identities=19%  Similarity=0.319  Sum_probs=32.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKL   48 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~   48 (348)
                      |||.+.|+ |-+|+++++.|++.| ++|.+.+|++++.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~   37 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKR   37 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHH
Confidence            58999986 999999999999887 8999999987655

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.13  E-value=0.02  Score=43.39  Aligned_cols=72  Identities=14%  Similarity=0.118  Sum_probs=44.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCeEEEEccCC-CcchHHHhh-----cCCCEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQ-VEGSFDKAV-----MGCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~-----~~~d~V   83 (348)
                      +.+|+|.|+ |.+|...++.+...|. .|+++++++.+..+.+..    +.+.+ .|.. +.+...+.+     .++|+|
T Consensus        29 G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~l----Ga~~~-i~~~~~~~~~~~~~~~~~~~g~D~v  102 (176)
T d2fzwa2          29 GSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GATEC-INPQDFSKPIQEVLIEMTDGGVDYS  102 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TCSEE-ECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHh----CCcEE-EeCCchhhHHHHHHHHHcCCCCcEe
Confidence            568999998 6789999999988886 566666666554333222    22222 1221 112232222     369999


Q ss_pred             EEccc
Q 035965           84 FHVAA   88 (348)
Q Consensus        84 ih~a~   88 (348)
                      |.+.+
T Consensus       103 id~~G  107 (176)
T d2fzwa2         103 FECIG  107 (176)
T ss_dssp             EECSC
T ss_pred             eecCC
Confidence            99987

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.09  E-value=0.017  Score=43.39  Aligned_cols=37  Identities=27%  Similarity=0.276  Sum_probs=32.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      +.+|+|.|+ |-+|...++.+...|.+|+++++++.+.
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~   64 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKL   64 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHH
Confidence            568999886 9999999998888899999999987655

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.98  E-value=0.018  Score=42.72  Aligned_cols=36  Identities=14%  Similarity=0.079  Sum_probs=29.2

Q ss_pred             CCeEEEe-CCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVT-GANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVt-GatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .+.++|. .+.||+|..+++.|.+.|++|+++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            3456665 24499999999999999999999998653

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=94.97  E-value=0.014  Score=44.17  Aligned_cols=34  Identities=18%  Similarity=0.108  Sum_probs=29.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDP   45 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~   45 (348)
                      +|||+|.|| |++|..++..|.+.+.  +|+++++++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            689999998 9999999999999875  788887765

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.81  E-value=0.011  Score=45.05  Aligned_cols=75  Identities=13%  Similarity=-0.016  Sum_probs=48.2

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCeE-EEEccCCCc--chHHHhh--cCCCEE
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRLR-LFQADLQVE--GSFDKAV--MGCDGV   83 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~Dl~d~--~~~~~~~--~~~d~V   83 (348)
                      .+.+|+|.|+ |.+|...++.+...|. +|+++++++.+.++.+..    +.+ ++...-.|.  +......  .++|+|
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~l----Ga~~~i~~~~~d~~~~~~~~~~~~~G~d~v  101 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL----GATECLNPKDYDKPIYEVICEKTNGGVDYA  101 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT----TCSEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHc----CCcEEEcCCCchhHHHHHHHHhcCCCCcEE
Confidence            3568999996 9999999999998886 788888887765333322    222 222222221  1122222  269999


Q ss_pred             EEcccc
Q 035965           84 FHVAAS   89 (348)
Q Consensus        84 ih~a~~   89 (348)
                      |.+++.
T Consensus       102 id~~g~  107 (174)
T d1p0fa2         102 VECAGR  107 (174)
T ss_dssp             EECSCC
T ss_pred             EEcCCC
Confidence            999873

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.72  E-value=0.014  Score=43.13  Aligned_cols=35  Identities=20%  Similarity=0.272  Sum_probs=31.8

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRD   44 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~   44 (348)
                      +++|+|||+|| |.+|..-++.|++.|.+|++++..
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            56899999998 999999999999999999999753

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=94.71  E-value=0.023  Score=42.93  Aligned_cols=75  Identities=16%  Similarity=0.106  Sum_probs=46.2

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhh--cCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAV--MGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~Vih~a   87 (348)
                      +.+|+|.|+ |.+|...++.+...|. .|+++++++.+..+.+..   ...+++..+-.+.+...+..  +++|+||.++
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~---ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~  108 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL---GADHVVDARRDPVKQVMELTRGRGVNVAMDFV  108 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT---TCSEEEETTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhc---ccceeecCcccHHHHHHHhhCCCCceEEEEec
Confidence            468999886 9999999998887775 667777776554333221   12233333322222233322  2589999998


Q ss_pred             cc
Q 035965           88 AS   89 (348)
Q Consensus        88 ~~   89 (348)
                      +.
T Consensus       109 g~  110 (172)
T d1h2ba2         109 GS  110 (172)
T ss_dssp             CC
T ss_pred             Cc
Confidence            73

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.59  E-value=0.034  Score=43.07  Aligned_cols=66  Identities=21%  Similarity=0.071  Sum_probs=48.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...+++|.|.|. |-||+.+++.|..-|.+|++.++...+...       ..+.        ..++.++++.+|+|+.+.
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-------~~~~--------~~~l~~l~~~~D~v~~~~  105 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDH-------PDFD--------YVSLEDLFKQSDVIDLHV  105 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCC-------TTCE--------ECCHHHHHHHCSEEEECC
T ss_pred             cccceeeeeeec-ccccccccccccccceeeeccCCccchhhh-------cchh--------HHHHHHHHHhcccceeee
Confidence            345789999995 999999999999999999999986543210       1111        234677777889887665


Q ss_pred             cc
Q 035965           88 AS   89 (348)
Q Consensus        88 ~~   89 (348)
                      ..
T Consensus       106 pl  107 (199)
T d1dxya1         106 PG  107 (199)
T ss_dssp             CC
T ss_pred             cc
Confidence            43

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.58  E-value=0.026  Score=43.79  Aligned_cols=67  Identities=18%  Similarity=0.167  Sum_probs=46.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhh-cCCCEEEE
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAV-MGCDGVFH   85 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~Vih   85 (348)
                      +.++++|+|-| .|-+|+++++.|.+.|.+|++.+.+.... .....     +.+.+     +.   .+++ .++|+++-
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~-----g~~~~-----~~---~~~~~~~~DI~iP   89 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVAL-----GHTAV-----AL---EDVLSTPCDVFAP   89 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-----TCEEC-----CG---GGGGGCCCSEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhh-----ccccc-----Cc---cccccccceeeec
Confidence            46789999999 59999999999999999999888765433 21111     22221     11   2233 37899998


Q ss_pred             ccc
Q 035965           86 VAA   88 (348)
Q Consensus        86 ~a~   88 (348)
                      ||.
T Consensus        90 cA~   92 (201)
T d1c1da1          90 CAM   92 (201)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            875

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.55  E-value=0.017  Score=47.60  Aligned_cols=35  Identities=26%  Similarity=0.193  Sum_probs=31.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .|||+|.|| |.-|...+.+|.+.|++|+++.+++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~~   35 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEGK   35 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            478999997 99999999999999999999997653

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.51  E-value=0.027  Score=44.77  Aligned_cols=37  Identities=32%  Similarity=0.447  Sum_probs=33.2

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      ...++|+|.|| |+.|...+.+|.++|++|+++.+.+.
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            35689999997 99999999999999999999998654

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.46  E-value=0.02  Score=47.86  Aligned_cols=37  Identities=22%  Similarity=0.201  Sum_probs=33.1

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      ..+++|+|.|| |..|...+..|.++|++|+++.+.+.
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            45689999997 99999999999999999999998653

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.44  E-value=0.015  Score=45.11  Aligned_cols=35  Identities=29%  Similarity=0.297  Sum_probs=29.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      |||.|.| .||+|..++..| ++|++|+++|.++.+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v   35 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKV   35 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHH
Confidence            6899997 699999998755 5799999999876543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.42  E-value=0.27  Score=39.02  Aligned_cols=35  Identities=17%  Similarity=0.182  Sum_probs=29.6

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDP   45 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~   45 (348)
                      +..+|+|.|+ |.+|++++..|+..|. +++++|.+.
T Consensus        29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            3579999996 9999999999999997 778887643

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=94.35  E-value=0.016  Score=47.60  Aligned_cols=34  Identities=21%  Similarity=0.181  Sum_probs=31.0

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      |+|+|.|| |.-|...+..|.++|++|+++.+++.
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~   34 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            57999998 99999999999999999999998654

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.27  E-value=0.034  Score=41.83  Aligned_cols=119  Identities=12%  Similarity=-0.013  Sum_probs=62.6

Q ss_pred             CeEEEeCC-CChhHHHHHHHHHHC----CCeEEEEEcCCCcc--cccccc----CCCCCeEEEEccCCCcchHHHhhcCC
Q 035965           12 KTFCVTGA-NGYIGSWLVKTLLER----GYIVHATVRDPGKL--QIFSKW----TRSDRLRLFQADLQVEGSFDKAVMGC   80 (348)
Q Consensus        12 ~~ilVtGa-tGfiG~~l~~~L~~~----g~~V~~~~r~~~~~--~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~   80 (348)
                      +||.|.|| +.+.+..++..+...    .-++..++.++.+.  +.....    ....+........+   +..+.++++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~t---d~~~al~ga   78 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTL---DRRRALDGA   78 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEES---CHHHHHTTC
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecC---CchhhcCCC
Confidence            68999997 334555555554433    13888888876432  111110    00011222222222   345677899


Q ss_pred             CEEEEccccCccccccccccccchh--------------hhhhhhhHHHHHHHHHHHhhcCCcceEEEe
Q 035965           81 DGVFHVAASMEFDINVKDNIETYVQ--------------STVINPAIQSTLNLLKACLKSESVKRVVLT  135 (348)
Q Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~--------------~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~  135 (348)
                      |+||.+|+.........+  +..+.              .....-|+.-.+.+++.+.+..+-..++.+
T Consensus        79 DvVv~ta~~~~~~~~~r~--~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~v  145 (169)
T d1s6ya1          79 DFVTTQFRVGGLEARAKD--ERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINF  145 (169)
T ss_dssp             SEEEECCCTTHHHHHHHH--HHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CEEEEccccCCCCCeehh--hhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEe
Confidence            999999987543321111  00000              012345778888888888888744444443

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.26  E-value=0.04  Score=40.74  Aligned_cols=70  Identities=19%  Similarity=0.099  Sum_probs=52.4

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEE
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFH   85 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   85 (348)
                      ....+|+++|.|= |++|+-++++|...|-+|+++..+|-++ +.     ..++++        ...+.++++..|++|-
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA-----~mdGf~--------v~~~~~a~~~aDi~vT   84 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQA-----VMEGFN--------VVTLDEIVDKGDFFIT   84 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHH-----HTTTCE--------ECCHHHHTTTCSEEEE
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHH-----HhcCCc--------cCchhHccccCcEEEE
Confidence            3456899999995 9999999999999999999999988544 21     123333        2345677788888887


Q ss_pred             ccccC
Q 035965           86 VAASM   90 (348)
Q Consensus        86 ~a~~~   90 (348)
                      +-+..
T Consensus        85 aTGn~   89 (163)
T d1v8ba1          85 CTGNV   89 (163)
T ss_dssp             CCSSS
T ss_pred             cCCCC
Confidence            77654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=94.23  E-value=0.036  Score=38.82  Aligned_cols=36  Identities=25%  Similarity=0.245  Sum_probs=30.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHH---CCCeEEEEEcCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLE---RGYIVHATVRDPG   46 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~---~g~~V~~~~r~~~   46 (348)
                      .+++++|.|| |++|-.++..|.+   .|.+|+++.|.+.
T Consensus        17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            3589999998 9999999987655   3889999998753

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.19  E-value=0.029  Score=38.61  Aligned_cols=38  Identities=16%  Similarity=-0.045  Sum_probs=31.6

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      ..++|+|+|.|+ |--|.-++..|...+.+|+.+.|+..
T Consensus        29 ~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          29 LFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            346899999996 99999999999988878777777554

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.17  E-value=0.027  Score=41.39  Aligned_cols=35  Identities=23%  Similarity=0.314  Sum_probs=29.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDP   45 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~   45 (348)
                      ||+|.|.|+||-||....+-+.+.  .++|.+++-..
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            678999999999999999988775  47888887544

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.14  E-value=0.048  Score=41.64  Aligned_cols=68  Identities=19%  Similarity=0.065  Sum_probs=48.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ...++++.|.|. |-||+.+++.|..-|.+|++.++...+......     .++        ..++.++++.+|+|+-+.
T Consensus        41 ~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~-----~~~--------~~~l~ell~~sDiv~~~~  106 (184)
T d1ygya1          41 EIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL-----GIE--------LLSLDDLLARADFISVHL  106 (184)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH-----TCE--------ECCHHHHHHHCSEEEECC
T ss_pred             cccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhhc-----Cce--------eccHHHHHhhCCEEEEcC
Confidence            356789999885 999999999998889999999987653311110     111        134677788889887665


Q ss_pred             cc
Q 035965           88 AS   89 (348)
Q Consensus        88 ~~   89 (348)
                      ..
T Consensus       107 Pl  108 (184)
T d1ygya1         107 PK  108 (184)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.10  E-value=0.034  Score=40.80  Aligned_cols=35  Identities=29%  Similarity=0.353  Sum_probs=29.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDP   45 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~   45 (348)
                      +|+|.|.|+||-||....+-+.+.  .++|.+++-..
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            689999999999999999988765  58888887544

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.08  E-value=0.019  Score=47.20  Aligned_cols=35  Identities=23%  Similarity=0.187  Sum_probs=31.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      +.+|+|.|| |..|..++..|.+.|++|.++.+++.
T Consensus         2 k~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           2 KTQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             BCSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            347999998 99999999999999999999998763

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.05  E-value=0.014  Score=44.60  Aligned_cols=33  Identities=30%  Similarity=0.293  Sum_probs=27.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVR   43 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r   43 (348)
                      |+.+|+|.|| |++|-.++..|.+.|.+|.++.+
T Consensus         2 m~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           2 LKAPVVVLGA-GLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CCSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence            4567999997 99999999999999987655554

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.98  E-value=0.019  Score=47.73  Aligned_cols=35  Identities=14%  Similarity=0.189  Sum_probs=31.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      |..|+|.|| |+-|..+++.|+++|++|.++.++..
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            567999997 99999999999999999999998654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.94  E-value=0.041  Score=41.10  Aligned_cols=72  Identities=19%  Similarity=0.141  Sum_probs=46.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCc---chHHHhhcCCCEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVE---GSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~d~Vih~a   87 (348)
                      +.+|+|.|+ |-+|...++.+...|.+|+++++++.+..+.+..    +.+.+. |..+.   +.+.+...+.+.+|.++
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~----Ga~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~  101 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL----GADLVV-NPLKEDAAKFMKEKVGGVHAAVVTA  101 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TCSEEE-CTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhc----Ccceec-ccccchhhhhcccccCCCceEEeec
Confidence            568999875 9999999999999999999999877665332222    233332 22222   22344445666666555


Q ss_pred             c
Q 035965           88 A   88 (348)
Q Consensus        88 ~   88 (348)
                      +
T Consensus       102 ~  102 (168)
T d1rjwa2         102 V  102 (168)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.93  E-value=0.12  Score=35.95  Aligned_cols=73  Identities=16%  Similarity=0.109  Sum_probs=48.5

Q ss_pred             CCeEEEeCCC----------ChhHHHHHHHHHHCCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhh--c
Q 035965           11 SKTFCVTGAN----------GYIGSWLVKTLLERGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAV--M   78 (348)
Q Consensus        11 ~~~ilVtGat----------GfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~   78 (348)
                      .+||||.|+-          -+-+.+.+++|.+.|++++.+..++......  +   +-..-+..+--..+.+.+.+  +
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd--~---d~aD~lYfeplt~e~v~~Ii~~E   78 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD--Y---DTSDRLYFEPVTLEDVLEIVRIE   78 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS--T---TSSSEEECCCCSHHHHHHHHHHH
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC--h---hhcCceEEccCCHHHHHHHHHHh
Confidence            5789999983          3789999999999999999999887644111  0   11222333334455666655  3


Q ss_pred             CCCEEEEccc
Q 035965           79 GCDGVFHVAA   88 (348)
Q Consensus        79 ~~d~Vih~a~   88 (348)
                      ++|.|+-..|
T Consensus        79 ~p~~ii~~~G   88 (121)
T d1a9xa4          79 KPKGVIVQYG   88 (121)
T ss_dssp             CCSEEECSSS
T ss_pred             CCCEEEeehh
Confidence            7888875443

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.85  E-value=0.034  Score=42.89  Aligned_cols=33  Identities=18%  Similarity=0.061  Sum_probs=28.5

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDP   45 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~   45 (348)
                      |||+|.|| |++|-.++..|.+.  +.+|+++.|..
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            68999998 99999999999887  45888888764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.83  E-value=0.032  Score=42.21  Aligned_cols=34  Identities=15%  Similarity=0.223  Sum_probs=29.4

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP   45 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~   45 (348)
                      .++|+|.|| |++|-.++..|.+.|.+|.++.+.+
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            578999997 9999999999999999877776554

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.79  E-value=0.061  Score=41.16  Aligned_cols=69  Identities=17%  Similarity=0.043  Sum_probs=47.7

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      ....++|.|.|. |-||+.+++.|..-|.+|...++..... ....            ..+....++.++++.+|+|+-+
T Consensus        41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~------------~~~~~~~~l~~~l~~sD~v~~~  107 (188)
T d2naca1          41 DLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE------------LNLTWHATREDMYPVCDVVTLN  107 (188)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH------------HTCEECSSHHHHGGGCSEEEEC
T ss_pred             eccccceeeccc-cccchhhhhhhhccCceEEEEeecccccccccc------------ccccccCCHHHHHHhccchhhc
Confidence            345789999995 9999999999998899999999865432 1111            0111234566777888887655


Q ss_pred             ccc
Q 035965           87 AAS   89 (348)
Q Consensus        87 a~~   89 (348)
                      ...
T Consensus       108 ~pl  110 (188)
T d2naca1         108 CPL  110 (188)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            543

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.76  E-value=0.035  Score=38.90  Aligned_cols=35  Identities=14%  Similarity=0.119  Sum_probs=28.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC---CCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER---GYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~---g~~V~~~~r~~~   46 (348)
                      +++++|.|| |++|-.++..|.+.   |.+|+++.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            579999998 99999999776654   568999998653

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.72  E-value=0.036  Score=46.66  Aligned_cols=35  Identities=26%  Similarity=0.228  Sum_probs=31.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC--CeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG--YIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g--~~V~~~~r~~~   46 (348)
                      +|+|+|.|| |.-|...+..|+++|  ++|+++.|+..
T Consensus         4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            789999997 999999999998876  69999998764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.72  E-value=0.049  Score=41.81  Aligned_cols=68  Identities=19%  Similarity=0.026  Sum_probs=47.7

Q ss_pred             CCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965            9 GRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      ..++++.|.|. |-||+.+++.|..-|.+|++.++..... .....            .....+++.++++.+|+|+-+.
T Consensus        45 l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~------------~~~~~~~l~~ll~~sD~v~l~~  111 (191)
T d1gdha1          45 LDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASY------------QATFHDSLDSLLSVSQFFSLNA  111 (191)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHH------------TCEECSSHHHHHHHCSEEEECC
T ss_pred             ecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhcc------------cccccCCHHHHHhhCCeEEecC
Confidence            45789999995 9999999999998899999998765432 11100            0111235777888889886655


Q ss_pred             cc
Q 035965           88 AS   89 (348)
Q Consensus        88 ~~   89 (348)
                      ..
T Consensus       112 pl  113 (191)
T d1gdha1         112 PS  113 (191)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.64  E-value=0.13  Score=36.75  Aligned_cols=70  Identities=16%  Similarity=0.206  Sum_probs=44.3

Q ss_pred             eEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc-----CCCEEEE
Q 035965           13 TFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM-----GCDGVFH   85 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~Vih   85 (348)
                      ||.|.|++|-.|+.+++.+.+. ++++.+..-..+.. ....     .+.+ +..|++.++...+.++     +..+|+=
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~-----~~~D-vvIDFS~p~~~~~~~~~~~~~~~~~ViG   74 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTD-----GNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVG   74 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHT-----TTCS-EEEECCCTTTHHHHHHHHHHTTCEEEEC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhcc-----ccCC-EEEEcccHHHHHHHHHHHHhcCCCEEEe
Confidence            6999999999999999988765 67766544222211 1111     1122 6688888877665543     5667764


Q ss_pred             ccc
Q 035965           86 VAA   88 (348)
Q Consensus        86 ~a~   88 (348)
                      .-|
T Consensus        75 TTG   77 (135)
T d1yl7a1          75 TTG   77 (135)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            444

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.61  E-value=0.024  Score=43.10  Aligned_cols=79  Identities=13%  Similarity=0.244  Sum_probs=45.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCCcc--ccccccC-----CCCCe-EEEEccCCCcchHHHhhcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPGKL--QIFSKWT-----RSDRL-RLFQADLQVEGSFDKAVMGCD   81 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~~~--~~~~~~~-----~~~~~-~~~~~Dl~d~~~~~~~~~~~d   81 (348)
                      |-||.|-| .|-||+.+++.|.++ +.+|+++....+..  .......     ..+.. .+....+.-...+..+.+++|
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD   79 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD   79 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence            45899998 699999999999987 46887776433221  1111000     00000 000011222234556666899


Q ss_pred             EEEEccccC
Q 035965           82 GVFHVAASM   90 (348)
Q Consensus        82 ~Vih~a~~~   90 (348)
                      +|+.|.+.+
T Consensus        80 iViecTG~f   88 (178)
T d1b7go1          80 IVVDTTPNG   88 (178)
T ss_dssp             EEEECCSTT
T ss_pred             EEEECCCCc
Confidence            999998853

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.44  E-value=0.16  Score=41.43  Aligned_cols=35  Identities=29%  Similarity=0.245  Sum_probs=31.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVR   43 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r   43 (348)
                      .+++++|+|-|- |-+|+++++.|.+.|.+|++++-
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            466789999996 99999999999999999998874

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.37  E-value=0.19  Score=37.55  Aligned_cols=76  Identities=13%  Similarity=0.182  Sum_probs=47.0

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEc-CCCcc-ccccccCCCCCeEEEEccC-----------CCcchHHH
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERG-YIVHATVR-DPGKL-QIFSKWTRSDRLRLFQADL-----------QVEGSFDK   75 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r-~~~~~-~~~~~~~~~~~~~~~~~Dl-----------~d~~~~~~   75 (348)
                      |++||.|-|- |=||+.+++.|.++. .+|+++.- ++... ......    ++..+..+.           .....+..
T Consensus         1 M~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (172)
T d2czca2           1 MKVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKEL----GIPVYAASEEFIPRFEKEGFEVAGTLND   75 (172)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHT----TCCEEESSGGGHHHHHHHTCCCSCBHHH
T ss_pred             CcEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhc----CceeecccccceeeecccCccccchhhh
Confidence            4579999995 999999999998764 57666653 33222 111111    222232221           22335566


Q ss_pred             hhcCCCEEEEccccC
Q 035965           76 AVMGCDGVFHVAASM   90 (348)
Q Consensus        76 ~~~~~d~Vih~a~~~   90 (348)
                      +.+++|+|+-|.|.+
T Consensus        76 ~~~~vDvViEcTG~f   90 (172)
T d2czca2          76 LLEKVDIIVDATPGG   90 (172)
T ss_dssp             HHTTCSEEEECCSTT
T ss_pred             hhccCCEEEECCCCC
Confidence            667899999999854

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=93.29  E-value=0.22  Score=35.64  Aligned_cols=35  Identities=29%  Similarity=0.338  Sum_probs=30.1

Q ss_pred             CCeEEEeCCC---ChhHHHHHHHHHHCCCeEEEEEcCC
Q 035965           11 SKTFCVTGAN---GYIGSWLVKTLLERGYIVHATVRDP   45 (348)
Q Consensus        11 ~~~ilVtGat---GfiG~~l~~~L~~~g~~V~~~~r~~   45 (348)
                      .++|.|.|||   +-.|..+.+.|.+.||+++.+.-++
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~   50 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRF   50 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGG
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecc
Confidence            5789999998   6799999999999999988776543

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.24  E-value=0.053  Score=39.10  Aligned_cols=35  Identities=29%  Similarity=0.398  Sum_probs=29.3

Q ss_pred             CCeEEEeCCCChhHHHHHHHHH----HCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLL----ERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~----~~g~~V~~~~r~~~   46 (348)
                      .++|+|.|| ||+|-.++..|.    +.|.+|+.+.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            468999997 999999999885    35899999988654

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.19  E-value=0.086  Score=45.85  Aligned_cols=75  Identities=17%  Similarity=0.136  Sum_probs=48.9

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCCcc-ccccc--c--------------------CCCCCeEEEEcc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPGKL-QIFSK--W--------------------TRSDRLRLFQAD   66 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~~~--~--------------------~~~~~~~~~~~D   66 (348)
                      ..||||.|+ |.+|+++++.|+..|. +++++|.+.=.. .+.+.  .                    +..-++..+..+
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~  115 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNK  115 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeecc
Confidence            568999998 7799999999999997 788888753211 11110  0                    011234555555


Q ss_pred             CCCcchHHHhhcCCCEEEEccc
Q 035965           67 LQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        67 l~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      +.+..  ...++++|+||.+..
T Consensus       116 i~~~~--~~~~~~~DlVi~~~D  135 (426)
T d1yovb1         116 IQDFN--DTFYRQFHIIVCGLD  135 (426)
T ss_dssp             GGGBC--HHHHTTCSEEEECCS
T ss_pred             ccchH--HHHHHhcchheeccC
Confidence            65533  356778999987643

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.17  E-value=0.059  Score=43.54  Aligned_cols=35  Identities=20%  Similarity=0.121  Sum_probs=30.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~   46 (348)
                      +++|+|.|| |..|..++..|.+.| +.|.++.+++.
T Consensus         1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           1 PIDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            358999998 999999999999999 48999998664

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.17  E-value=0.046  Score=43.23  Aligned_cols=70  Identities=16%  Similarity=0.105  Sum_probs=47.5

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      +.++++|+|-|- |-+|+++++.|.+.|.+|++.+.+.... ......    +...     .+.+.+  +-.++|+++-|
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~----g~~~-----~~~~~~--~~~~cDIl~Pc  103 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE----GADA-----VAPNAI--YGVTCDIFAPC  103 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CCEE-----CCGGGT--TTCCCSEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc----CCcc-----cCCccc--ccccccEeccc
Confidence            467899999995 9999999999999999999888765432 111111    1111     122221  12379999999


Q ss_pred             ccc
Q 035965           87 AAS   89 (348)
Q Consensus        87 a~~   89 (348)
                      |-.
T Consensus       104 A~~  106 (230)
T d1leha1         104 ALG  106 (230)
T ss_dssp             SCS
T ss_pred             ccc
Confidence            864

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=93.00  E-value=0.042  Score=44.77  Aligned_cols=31  Identities=23%  Similarity=0.117  Sum_probs=28.9

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRDP   45 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~   45 (348)
                      |+|.|| |..|..++.+|+++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899997 9999999999999999999999854

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.94  E-value=0.0076  Score=48.13  Aligned_cols=27  Identities=33%  Similarity=0.247  Sum_probs=24.1

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVH   39 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~   39 (348)
                      |||+|.|| |.+|...+.+|+++|++|+
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCce
Confidence            58999997 9999999999999997643

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.81  E-value=0.047  Score=43.19  Aligned_cols=33  Identities=21%  Similarity=0.128  Sum_probs=29.9

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      -|+|.|| |+-|...+..|+++|++|.++.+++.
T Consensus         7 DviViGa-G~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           7 DVIVLGT-GITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            3899996 99999999999999999999998764

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=92.77  E-value=0.12  Score=36.52  Aligned_cols=94  Identities=10%  Similarity=0.032  Sum_probs=56.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHH-CCCeEEEEEcCCCccccccccCCCCCeEEEEccCCCcchHHHhhc-CCCEEEEccc
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLE-RGYIVHATVRDPGKLQIFSKWTRSDRLRLFQADLQVEGSFDKAVM-GCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~Vih~a~   88 (348)
                      ..+|+|.|| |-+|..|++++.. .||+++++.-+.++..=.    ...++.++..     +.+.+..+ .+++++-+..
T Consensus         3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~----~I~Gi~V~~~-----~~l~~~~~~~i~iai~~i~   72 (126)
T d2dt5a2           3 KWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGR----PVRGGVIEHV-----DLLPQRVPGRIEIALLTVP   72 (126)
T ss_dssp             CEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTC----EETTEEEEEG-----GGHHHHSTTTCCEEEECSC
T ss_pred             CceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCC----EECCEEEecH-----HHHHHHHhhcccEEEEeCC
Confidence            348999997 9999999998753 478988877654322000    1125666533     34555554 3555444432


Q ss_pred             cCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccce
Q 035965           89 SMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSVS  139 (348)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~~  139 (348)
                      .                        .....+++.+.+.| ++.+.-++...
T Consensus        73 ~------------------------~~~~~I~d~l~~~g-Ik~I~~f~~~~   98 (126)
T d2dt5a2          73 R------------------------EAAQKAADLLVAAG-IKGILNFAPVV   98 (126)
T ss_dssp             H------------------------HHHHHHHHHHHHHT-CCEEEECSSSC
T ss_pred             H------------------------HHHHHHHHHHHHcC-CCEEeecCcee
Confidence            1                        11235677777778 88777776644

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=92.72  E-value=0.047  Score=45.06  Aligned_cols=32  Identities=28%  Similarity=0.589  Sum_probs=29.0

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY-IVHATVRDP   45 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~   45 (348)
                      +|+|.|| |.+|..++.+|+++|. +|.+++++.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6999997 9999999999999996 699999864

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.59  E-value=0.057  Score=40.08  Aligned_cols=31  Identities=29%  Similarity=0.383  Sum_probs=27.0

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDP   45 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~   45 (348)
                      ||+|.|| |++|-.++..|. ++.+|+++.+.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7999997 999999999985 578999998754

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=92.46  E-value=0.098  Score=38.64  Aligned_cols=69  Identities=20%  Similarity=0.123  Sum_probs=37.3

Q ss_pred             CCeEEEeCCCChhHHHHH-HHHHHC-CCeEEEE-EcCCCcc--ccccccCCCCCeEEEEccCCCcchHHHh--hcCCCEE
Q 035965           11 SKTFCVTGANGYIGSWLV-KTLLER-GYIVHAT-VRDPGKL--QIFSKWTRSDRLRLFQADLQVEGSFDKA--VMGCDGV   83 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~-~~L~~~-g~~V~~~-~r~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~d~V   83 (348)
                      +.||.|.| +|.+|+.+. +.|... ..+++++ +|+....  .+....    ++.+....   .+.+.+.  +.++|+|
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~----~i~~~~~~---~d~l~~~~~~~~iDiV   75 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM----GVTTTYAG---VEGLIKLPEFADIDFV   75 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT----TCCEESSH---HHHHHHSGGGGGEEEE
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhc----CCcccccc---eeeeeecccccccCEE
Confidence            46899999 899999754 554333 3467665 4554322  222111    33333222   2233332  3468999


Q ss_pred             EEcc
Q 035965           84 FHVA   87 (348)
Q Consensus        84 ih~a   87 (348)
                      |.+.
T Consensus        76 f~AT   79 (157)
T d1nvmb1          76 FDAT   79 (157)
T ss_dssp             EECS
T ss_pred             EEcC
Confidence            9764

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.19  E-value=0.087  Score=43.82  Aligned_cols=35  Identities=17%  Similarity=0.135  Sum_probs=31.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      ..||+|.|| |+-|...+..|.++|++|+++-.+..
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~r   39 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARDR   39 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            467999997 99999999999999999999987543

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=92.08  E-value=0.26  Score=36.77  Aligned_cols=75  Identities=19%  Similarity=0.272  Sum_probs=45.1

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEc-CCCcc-ccccccCCCCCeEEEEcc-----------CCCcchHHHh
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG-YIVHATVR-DPGKL-QIFSKWTRSDRLRLFQAD-----------LQVEGSFDKA   76 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r-~~~~~-~~~~~~~~~~~~~~~~~D-----------l~d~~~~~~~   76 (348)
                      |++|.|-| .|-||+.+.+.|.+++ .+|+++.- .+... ......    +...+...           +.-...+..+
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~v~g~~~~~   75 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKK----GYDLYVAIPERVKLFEKAGIEVAGTVDDM   75 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHT----TCCEEESSGGGHHHHHHTTCCCCEEHHHH
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhc----CCceEecccccceeecccCcccCCChhHh
Confidence            67999998 6999999999998775 56666654 22211 111110    11222211           1112345566


Q ss_pred             hcCCCEEEEccccC
Q 035965           77 VMGCDGVFHVAASM   90 (348)
Q Consensus        77 ~~~~d~Vih~a~~~   90 (348)
                      ++++|+|+-|.|.+
T Consensus        76 ~~~vDvViEcTG~f   89 (171)
T d1cf2o1          76 LDEADIVIDCTPEG   89 (171)
T ss_dssp             HHTCSEEEECCSTT
T ss_pred             hcCCCEEEEccCCC
Confidence            67899999998854

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=91.90  E-value=0.16  Score=38.02  Aligned_cols=74  Identities=16%  Similarity=0.129  Sum_probs=44.7

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC-CeEEEEEcCCCccccccccCCCCCe-EEEEccCCC--cchHHHhh--cCCCEEE
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG-YIVHATVRDPGKLQIFSKWTRSDRL-RLFQADLQV--EGSFDKAV--MGCDGVF   84 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~Dl~d--~~~~~~~~--~~~d~Vi   84 (348)
                      +.+|+|+|+ |-+|...+..+...| .+|+++++++.+.+..+..    +. +++..+-.+  ........  .++|+||
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~----GAd~~in~~~~~~~~~~~~~~~~~~G~d~vi  103 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF----GATDFVNPNDHSEPISQVLSKMTNGGVDFSL  103 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT----TCCEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred             CCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHc----CCcEEEcCCCcchhHHHHHHhhccCCcceee
Confidence            568999997 557777777777776 5788888887765333222    22 233221111  12222222  3699999


Q ss_pred             Ecccc
Q 035965           85 HVAAS   89 (348)
Q Consensus        85 h~a~~   89 (348)
                      .+.+.
T Consensus       104 d~~G~  108 (175)
T d1cdoa2         104 ECVGN  108 (175)
T ss_dssp             ECSCC
T ss_pred             eecCC
Confidence            99873

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.85  E-value=0.043  Score=41.58  Aligned_cols=39  Identities=18%  Similarity=0.135  Sum_probs=33.0

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      ..+.++|+|.|+ |..++.++.+|.+.| +|+++.|+..+.
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka   53 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKA   53 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHH
Confidence            356789999996 889999999997767 899999987654

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=91.16  E-value=0.099  Score=41.62  Aligned_cols=33  Identities=27%  Similarity=0.198  Sum_probs=29.5

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGY-IVHATVRDPG   46 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~~   46 (348)
                      +|+|.|| |.-|...+..|.++|+ +|+++.+++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~~   35 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATDH   35 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence            6999997 9999999999999996 6999998653

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.09  E-value=0.34  Score=39.53  Aligned_cols=27  Identities=26%  Similarity=0.298  Sum_probs=24.4

Q ss_pred             CCChhHHHHHHHHHHCCCeEEEEEcCC
Q 035965           19 ANGYIGSWLVKTLLERGYIVHATVRDP   45 (348)
Q Consensus        19 atGfiG~~l~~~L~~~g~~V~~~~r~~   45 (348)
                      +||-.|.+|+++|+.+|++|+.+.+..
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCC
Confidence            479999999999999999999998754

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.94  E-value=0.22  Score=38.40  Aligned_cols=76  Identities=12%  Similarity=0.173  Sum_probs=44.3

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc--c-ccc-c--cCCCCCeEEEE-ccCCCcchHHHhhc-CCCEE
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL--Q-IFS-K--WTRSDRLRLFQ-ADLQVEGSFDKAVM-GCDGV   83 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~-~~~-~--~~~~~~~~~~~-~Dl~d~~~~~~~~~-~~d~V   83 (348)
                      |||+|+|. +-.|..+.+.|.+.|++|.++.-.+++.  . ... .  .....++.++. .++.+.+.++.+.+ ++|++
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli   79 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI   79 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence            57888875 5679999999999999997766433221  0 000 0  00112455554 45555544333322 68988


Q ss_pred             EEccc
Q 035965           84 FHVAA   88 (348)
Q Consensus        84 ih~a~   88 (348)
                      |-...
T Consensus        80 i~~g~   84 (203)
T d2blna2          80 FSFYY   84 (203)
T ss_dssp             EEESC
T ss_pred             eeeec
Confidence            87754

>d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB
species: Escherichia coli [TaxId: 562]

Probab=90.77  E-value=1.2  Score=37.96  Aligned_cols=88  Identities=11%  Similarity=0.064  Sum_probs=60.7

Q ss_pred             CCCCCcCCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC-Ccc-ccccc-c-CCCCCeEEEEccCCCcch---H
Q 035965            1 MEKPEESTGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP-GKL-QIFSK-W-TRSDRLRLFQADLQVEGS---F   73 (348)
Q Consensus         1 m~~~~~~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~-~~~-~~~~~-~-~~~~~~~~~~~Dl~d~~~---~   73 (348)
                      |+++...++.+-|||=.+ +..-|-...+.|++.|.+|+-+-+-. .+. +.... . ....+-+.+..|+.+++.   +
T Consensus         1 ~~~~~~gPL~GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~~n~~K~si~ldl~~~~G~~~~   79 (402)
T d1xk7a1           1 LPMPKFGPLAGLRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAF   79 (402)
T ss_dssp             CCCCCCSTTTTCEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHHHTTTCEEEEECTTSHHHHHHH
T ss_pred             CCCCCCcCCCCCEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHHhCCCCeEEEEeCcCHHHHHHH
Confidence            566666677888898777 46668888889999999999998632 111 11100 0 012355789999998754   5


Q ss_pred             HHhhcCCCEEEEcccc
Q 035965           74 DKAVMGCDGVFHVAAS   89 (348)
Q Consensus        74 ~~~~~~~d~Vih~a~~   89 (348)
                      .++++.+|+||++--.
T Consensus        80 ~~Lv~~aDv~i~n~rp   95 (402)
T d1xk7a1          80 LKLMETTDIFIEASKG   95 (402)
T ss_dssp             HHHHTTCSEEEEECSS
T ss_pred             HHHHhhcCCceeeecc
Confidence            6678899999999654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.97  E-value=0.21  Score=39.70  Aligned_cols=36  Identities=28%  Similarity=0.304  Sum_probs=31.8

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRD   44 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~   44 (348)
                      +.++++|+|-| .|-+|+++++.|.+.|.+|++++-.
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            46789999998 5999999999999999999988753

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=89.58  E-value=0.17  Score=41.58  Aligned_cols=35  Identities=29%  Similarity=0.358  Sum_probs=31.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      .-.|+|+|| |+-|-..+.+|.+.|.+|+++.+.+.
T Consensus         7 ~~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           7 EVDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            347999998 99999999999999999999998764

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.50  E-value=0.18  Score=41.96  Aligned_cols=32  Identities=25%  Similarity=0.223  Sum_probs=29.1

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      |+|.|| |.-|...+.+|.++|++|+++.++..
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~~   33 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARDR   33 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            789997 99999999999999999999997653

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.19  E-value=0.23  Score=39.66  Aligned_cols=36  Identities=25%  Similarity=0.139  Sum_probs=31.7

Q ss_pred             CCCCCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc
Q 035965            7 STGRSKTFCVTGANGYIGSWLVKTLLERGYIVHATVR   43 (348)
Q Consensus         7 ~~~~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r   43 (348)
                      .++++++|+|-| .|-+|+++++.|.+.|.+|++++-
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            356789999999 599999999999999999988764

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=87.97  E-value=1.4  Score=33.62  Aligned_cols=77  Identities=19%  Similarity=0.134  Sum_probs=45.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc--------cCCCCCeEEEEccCCCcchHHHhhc--C
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK--------WTRSDRLRLFQADLQVEGSFDKAVM--G   79 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~--------~~~~~~~~~~~~Dl~d~~~~~~~~~--~   79 (348)
                      +|||+++|. +..+..+.+.|.+.|++|.++.-.+++. .....        .....++.+...+..+.+...+.++  +
T Consensus         3 ~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (206)
T d1fmta2           3 SLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQ   81 (206)
T ss_dssp             CCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHTT
T ss_pred             CcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhhc
Confidence            578999984 7889999999999999987766443221 00000        0011244555555544444555444  5


Q ss_pred             CCEEEEccc
Q 035965           80 CDGVFHVAA   88 (348)
Q Consensus        80 ~d~Vih~a~   88 (348)
                      +|+++-+..
T Consensus        82 ~d~~v~~~~   90 (206)
T d1fmta2          82 ADVMVVVAY   90 (206)
T ss_dssp             CSEEEEESC
T ss_pred             ceEEEeecc
Confidence            777665544

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.87  E-value=0.61  Score=34.27  Aligned_cols=74  Identities=19%  Similarity=0.105  Sum_probs=43.3

Q ss_pred             CeEEEeCCCChhHHHHHHH-HHHC-----CCeEEEEEcCCCccc-cccccC--CCCCeEEEEccCCCcchHHHhhcCCCE
Q 035965           12 KTFCVTGANGYIGSWLVKT-LLER-----GYIVHATVRDPGKLQ-IFSKWT--RSDRLRLFQADLQVEGSFDKAVMGCDG   82 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~-L~~~-----g~~V~~~~r~~~~~~-~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~   82 (348)
                      |||.|.|| |-+|..++-. |+..     +.++..+|.++.+.. ......  ..........     .+..+.++++|+
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t-----~~~~~~l~~aDv   74 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLIS-----DTFEGAVVDAKY   74 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEEC-----SSHHHHHTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEe-----cCcccccCCCCE
Confidence            58999998 5567665533 3322     358999998776541 111100  0112232221     234567789999


Q ss_pred             EEEccccCc
Q 035965           83 VFHVAASME   91 (348)
Q Consensus        83 Vih~a~~~~   91 (348)
                      ||..|+...
T Consensus        75 VVita~~~~   83 (162)
T d1up7a1          75 VIFQFRPGG   83 (162)
T ss_dssp             EEECCCTTH
T ss_pred             EEEecccCC
Confidence            999998653

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.68  E-value=0.45  Score=34.68  Aligned_cols=35  Identities=23%  Similarity=0.114  Sum_probs=29.4

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRDP   45 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~~   45 (348)
                      ..++|+|.|| |.+|.-.+..+++.|. .|+++.|.+
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            4578999998 9999999999999986 577777754

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.23  E-value=0.31  Score=37.96  Aligned_cols=34  Identities=24%  Similarity=0.346  Sum_probs=29.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHC--CCeEEEEEcCCC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLER--GYIVHATVRDPG   46 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~--g~~V~~~~r~~~   46 (348)
                      .||+|.|| |--|...+.+|.++  |++|+++.+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            48999997 99999999999875  789999988754

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.11  E-value=0.33  Score=38.25  Aligned_cols=33  Identities=21%  Similarity=0.102  Sum_probs=30.1

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      -|+|.|| |..|...+..|.++|++|.++.+.+.
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            4899997 99999999999999999999998654

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=86.92  E-value=0.29  Score=41.16  Aligned_cols=30  Identities=23%  Similarity=0.125  Sum_probs=27.9

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcC
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRD   44 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~   44 (348)
                      |+|.|+ |+-|..++..|.+.|++|.++-+.
T Consensus         5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence            788895 999999999999999999999985

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=86.61  E-value=0.38  Score=41.15  Aligned_cols=32  Identities=16%  Similarity=0.089  Sum_probs=25.1

Q ss_pred             CeEEEeCC------CChhH---HHHHHHHHHCCCeEEEEEc
Q 035965           12 KTFCVTGA------NGYIG---SWLVKTLLERGYIVHATVR   43 (348)
Q Consensus        12 ~~ilVtGa------tGfiG---~~l~~~L~~~g~~V~~~~r   43 (348)
                      ||||+++.      +|.+|   .+|+++|.++||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            67888664      45565   6679999999999998874

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.74  E-value=0.53  Score=41.91  Aligned_cols=34  Identities=21%  Similarity=0.282  Sum_probs=28.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCC-eEEEEEcC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGY-IVHATVRD   44 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~-~V~~~~r~   44 (348)
                      +..+|+|.|+ |-+|+++++.|+..|. +++++|.+
T Consensus        24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            3568999997 7899999999999995 78888754

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=85.63  E-value=0.31  Score=40.47  Aligned_cols=33  Identities=18%  Similarity=0.205  Sum_probs=28.8

Q ss_pred             eEEEeCCCChhHHHHHHHHH-----HCCCeEEEEEcCCC
Q 035965           13 TFCVTGANGYIGSWLVKTLL-----ERGYIVHATVRDPG   46 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~-----~~g~~V~~~~r~~~   46 (348)
                      -|+|.|| |..|..++..|+     ++|++|+++.|++.
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            4899998 999999999996     46999999998754

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.59  E-value=0.54  Score=36.04  Aligned_cols=33  Identities=21%  Similarity=0.229  Sum_probs=27.6

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDP   45 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~   45 (348)
                      |||++.|. +..|..+.+.|.++|++|.++.-.+
T Consensus         1 MkI~~~G~-~~~~~~~l~~L~~~~~~i~~V~t~p   33 (203)
T d2bw0a2           1 MKIAVIGQ-SLFGQEVYCHLRKEGHEVVGVFTVP   33 (203)
T ss_dssp             CEEEEECC-HHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCcEEEEEcCC
Confidence            58999985 7889999999999999998776433

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.56  E-value=0.31  Score=37.96  Aligned_cols=35  Identities=17%  Similarity=0.197  Sum_probs=30.6

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCC-------CeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERG-------YIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g-------~~V~~~~r~~~   46 (348)
                      +.||+|.|| |.-|-..+.+|+++|       ++|+++.+.+.
T Consensus         2 p~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~   43 (239)
T d1lqta2           2 PYYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT   43 (239)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred             CcEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence            468999997 999999999999988       47999998764

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=85.19  E-value=0.39  Score=39.21  Aligned_cols=33  Identities=21%  Similarity=0.217  Sum_probs=29.8

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      -|+|.|| |..|...+.+|.++|.+|+++.+.+.
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~~   50 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEPV   50 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            4899997 99999999999999999999998653

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.14  E-value=0.58  Score=35.06  Aligned_cols=68  Identities=12%  Similarity=0.166  Sum_probs=40.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHC-CCeEEEE-EcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc--CCCEEEEc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLER-GYIVHAT-VRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCDGVFHV   86 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~-~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih~   86 (348)
                      .||.|.|+ |.+|+..++.|... +.+|+++ ++++.+. .+...........+       .++++++++  ++|+|+-+
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ll~~~~iD~v~I~   73 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI-------HGSYESLLEDPEIDALYVP   73 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE-------ESSHHHHHHCTTCCEEEEC
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceee-------cCcHHHhhhccccceeeec
Confidence            58999995 99999999998775 6688765 4554433 22222111111222       124555553  58998865


Q ss_pred             c
Q 035965           87 A   87 (348)
Q Consensus        87 a   87 (348)
                      .
T Consensus        74 t   74 (184)
T d1ydwa1          74 L   74 (184)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.72  E-value=0.46  Score=36.68  Aligned_cols=34  Identities=21%  Similarity=0.251  Sum_probs=27.8

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC--eEEEEEcCC
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY--IVHATVRDP   45 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~--~V~~~~r~~   45 (348)
                      ...++|.|| ||+|-.++..|.+.|+  +|+++++.+
T Consensus         4 ~~~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e~   39 (213)
T d1m6ia1           4 HVPFLLIGG-GTAAFAAARSIRARDPGARVLIVSEDP   39 (213)
T ss_dssp             EEEEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred             CCCEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence            346889887 9999999999998876  588888643

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=84.60  E-value=2.7  Score=34.39  Aligned_cols=78  Identities=14%  Similarity=-0.015  Sum_probs=46.2

Q ss_pred             CCCeEEEe-CCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-cccc--ccCCCCCeEEEEccCCCcch-HHHhhcCCCEEE
Q 035965           10 RSKTFCVT-GANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFS--KWTRSDRLRLFQADLQVEGS-FDKAVMGCDGVF   84 (348)
Q Consensus        10 ~~~~ilVt-GatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~--~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~d~Vi   84 (348)
                      ++++||=. -++|..+.+++    ..+.+|++++.++... ....  ..+..++++++.+|..+... +...-+.+|.|+
T Consensus       145 ~g~rVLDl~~gtG~~s~~~a----~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~Vi  220 (318)
T d1wxxa2         145 RGERALDVFSYAGGFALHLA----LGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVV  220 (318)
T ss_dssp             CEEEEEEETCTTTHHHHHHH----HHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCeeeccCCCCcHHHHHHH----hcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEEE
Confidence            35666644 45666555443    3467999999987533 1111  11233578999999877422 233334689999


Q ss_pred             EccccCc
Q 035965           85 HVAASME   91 (348)
Q Consensus        85 h~a~~~~   91 (348)
                      .....+.
T Consensus       221 ~DpP~~~  227 (318)
T d1wxxa2         221 LDPPAFA  227 (318)
T ss_dssp             ECCCCSC
T ss_pred             EcCCccc
Confidence            8765443

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=84.59  E-value=0.34  Score=38.00  Aligned_cols=77  Identities=16%  Similarity=0.112  Sum_probs=55.6

Q ss_pred             CCeEEEeC-CCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTG-ANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtG-atGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      +++||=.| |+|..-++|++..-. +-+|++++.++... .+.......+++..+..|..+++.+......+|+|++...
T Consensus        74 G~~VLDlGaGsG~~t~~la~~VG~-~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~d~~  152 (227)
T d1g8aa_          74 GKSVLYLGIASGTTASHVSDIVGW-EGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA  152 (227)
T ss_dssp             TCEEEEETTTSTTHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred             CCEEEEeccCCCHHHHHHHHHhCC-CCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEEEEEcc
Confidence            56787776 578888888886533 34899999987654 3333333446788999999998877666667898887543

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.31  E-value=0.17  Score=39.20  Aligned_cols=75  Identities=15%  Similarity=0.171  Sum_probs=52.5

Q ss_pred             CCeEEEeCC-CChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEcc
Q 035965           11 SKTFCVTGA-NGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVA   87 (348)
Q Consensus        11 ~~~ilVtGa-tGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a   87 (348)
                      +++||=.|+ +|..-++|++.. ..| +|++++.++... .........+++.++.+|..++......+..+|+|+|..
T Consensus        57 g~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~~~  133 (209)
T d1nt2a_          57 DERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI  133 (209)
T ss_dssp             SCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC
T ss_pred             CCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEEecc
Confidence            468888884 677777777654 445 899999987544 222222334689999999999877666666788888753

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=84.30  E-value=0.51  Score=36.22  Aligned_cols=31  Identities=13%  Similarity=0.057  Sum_probs=28.3

Q ss_pred             EEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 035965           14 FCVTGANGYIGSWLVKTLLERGYIVHATVRDP   45 (348)
Q Consensus        14 ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~   45 (348)
                      |+|.|| |+.|...+.++.+.|.+|.++.+..
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            789997 9999999999999999999998753

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=84.17  E-value=1.9  Score=31.68  Aligned_cols=31  Identities=26%  Similarity=0.316  Sum_probs=26.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEc
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVR   43 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r   43 (348)
                      +||.|=|- |=||+.+.+.|.+++.+|.++.-
T Consensus         1 ikigINGf-GRIGR~~~R~l~~~~i~iv~INd   31 (168)
T d2g82a1           1 MKVGINGF-GRIGRQVFRILHSRGVEVALIND   31 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CEEEEECC-cHHHHHHHHHHhcCCCEEEEECC
Confidence            47888884 99999999999999999887764

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.99  E-value=0.9  Score=35.28  Aligned_cols=77  Identities=13%  Similarity=0.098  Sum_probs=47.8

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccc-------------------cCCCCCeEEEEccCCC
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSK-------------------WTRSDRLRLFQADLQV   69 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-------------------~~~~~~~~~~~~Dl~d   69 (348)
                      .+.+||..|+ |- | ..+..|+++|++|++++-++... .....                   ......++++.+|+.+
T Consensus        45 ~~~rvLd~GC-G~-G-~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLC-GK-A-VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTC-TT-C-THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCC-CC-c-HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            3568999985 43 4 45667888999999999876422 10000                   0123478888998776


Q ss_pred             cchHHHhhcCCCEEEEccccCc
Q 035965           70 EGSFDKAVMGCDGVFHVAASME   91 (348)
Q Consensus        70 ~~~~~~~~~~~d~Vih~a~~~~   91 (348)
                      ...  .....+|+|+..+....
T Consensus       122 l~~--~~~~~fd~i~~~~~l~~  141 (229)
T d2bzga1         122 LPR--TNIGKFDMIWDRGALVA  141 (229)
T ss_dssp             GGG--SCCCCEEEEEESSSTTT
T ss_pred             ccc--cccCceeEEEEEEEEEe
Confidence            432  11224688887766543

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=83.75  E-value=0.57  Score=38.58  Aligned_cols=33  Identities=21%  Similarity=0.319  Sum_probs=22.8

Q ss_pred             CeEEEeCC-C-Chh--HHHHHHHHHHCCCeEEEEEcC
Q 035965           12 KTFCVTGA-N-GYI--GSWLVKTLLERGYIVHATVRD   44 (348)
Q Consensus        12 ~~ilVtGa-t-Gfi--G~~l~~~L~~~g~~V~~~~r~   44 (348)
                      |||+|++| | |.+  ...|+++|.++||+|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            57888764 3 222  223788998999999887754

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=83.63  E-value=1.8  Score=33.12  Aligned_cols=93  Identities=16%  Similarity=0.095  Sum_probs=58.5

Q ss_pred             CCeEEEeCCCChhHHHHHHHHHHCCC---eEEEEEcCCCccccccccCCCCCeEEEEccC-------------------C
Q 035965           11 SKTFCVTGANGYIGSWLVKTLLERGY---IVHATVRDPGKLQIFSKWTRSDRLRLFQADL-------------------Q   68 (348)
Q Consensus        11 ~~~ilVtGatGfiG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl-------------------~   68 (348)
                      ..||.|.|- |.-|.+++.+|.+.|.   +.++++-+....  ....   ....+..+.-                   .
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L--~~~~---~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e   88 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQL--IRTK---ADKKILIGKKLTRGLGAGGNPKIGEEAAKE   88 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHHH--HTSC---CSEEEECCTTTTTTBCCTTCHHHHHHHHHH
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHHH--hcCC---cchhcccccccccccccccchHHHHHHHHH
Confidence            468999996 9999999999998864   445555433211  1110   1122222211                   1


Q ss_pred             CcchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC
Q 035965           69 VEGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE  127 (348)
Q Consensus        69 d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~  127 (348)
                      +.+.+.+.++++|.||-+||.......                  -++-.+.+.+++.+
T Consensus        89 ~~~~I~~~l~~~d~vfi~AGlGGGTGs------------------gaapvia~~ake~g  129 (209)
T d2vapa1          89 SAEEIKAAIQDSDMVFITCGLGGGTGT------------------GSAPVVAEISKKIG  129 (209)
T ss_dssp             THHHHHHHHTTCSEEEEEEETTSSHHH------------------HHHHHHHHHHHHTT
T ss_pred             HHHHHHHhccCCCEEEEEEeCCCCccc------------------cHHHHHHHHHHHcC
Confidence            234667778899999999998665441                  12335788888887

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=83.59  E-value=1.6  Score=32.95  Aligned_cols=92  Identities=14%  Similarity=0.063  Sum_probs=58.4

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCC---eEEEEEcCCCccccccccCCCCCeEEEEccC-------------------CC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGY---IVHATVRDPGKLQIFSKWTRSDRLRLFQADL-------------------QV   69 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dl-------------------~d   69 (348)
                      +||.|.|- |.-|.+++.+|.+.|.   +.++++-+...  +....   ...++..+.-                   .+
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~--L~~~~---a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~   74 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQV--LEASN---ADVKIQIGENITRGLGAGGRPEIGEQAALES   74 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHH--HHTCC---CSEEEECCTTTTTTSCCTTCHHHHHHHHHHT
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHH--HhcCC---cceEEecccccCCCcccccCchhhHhHHHHH
Confidence            47899996 9999999999998763   44555543321  11111   1222222211                   13


Q ss_pred             cchHHHhhcCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcC
Q 035965           70 EGSFDKAVMGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSE  127 (348)
Q Consensus        70 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~  127 (348)
                      .+.+.+.+++.|.||-+|+.......                  -++-.+.+.|++.+
T Consensus        75 ~~~I~~~l~~~d~vfi~AGlGGgTGt------------------gaapviA~~ake~g  114 (194)
T d1w5fa1          75 EEKIREVLQDTHMVFITAGFGGGTGT------------------GASPVIAKIAKEMG  114 (194)
T ss_dssp             HHHHHHHTTTCSEEEEEEETTSSHHH------------------HHHHHHHHHHHHTT
T ss_pred             HHHHHHHhcCCCeEEEEEecCCCccc------------------chHHHHHHHHHHcC
Confidence            44667778899999999998765441                  22345888888888

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=83.34  E-value=0.52  Score=39.55  Aligned_cols=67  Identities=15%  Similarity=0.089  Sum_probs=43.4

Q ss_pred             EEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc---ccccccCCCCCeEEEEccCCCcch-HHHhhcCCCEEEE
Q 035965           15 CVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL---QIFSKWTRSDRLRLFQADLQVEGS-FDKAVMGCDGVFH   85 (348)
Q Consensus        15 lVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~d~Vih   85 (348)
                      =+.+|+|.+|-.|+    +++.+|+++..++...   ......+...+++++.+|..+.-. .......+|+||-
T Consensus       218 DLycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~~n~i~n~~~~~~~~~~~~~~~~~~~~~~d~vil  288 (358)
T d1uwva2         218 DLFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL  288 (358)
T ss_dssp             EESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE
T ss_pred             Eecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHHhcccccceeeecchhhhhhhhhhhhccCceEEe
Confidence            36688999998765    4678999999876533   112223345689999999876432 2222335788763

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=83.31  E-value=0.66  Score=34.68  Aligned_cols=68  Identities=13%  Similarity=0.064  Sum_probs=38.1

Q ss_pred             CCCCeEEEeCCCChhHHH-HHHHHHHCC--CeEEEE-EcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhc--CCC
Q 035965            9 GRSKTFCVTGANGYIGSW-LVKTLLERG--YIVHAT-VRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVM--GCD   81 (348)
Q Consensus         9 ~~~~~ilVtGatGfiG~~-l~~~L~~~g--~~V~~~-~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d   81 (348)
                      |++.+|.|.| +|.+|+. .+..|.+.+  .+|+++ ++++.+. .+....    +...+.      .++.++++  ++|
T Consensus         1 MkkirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~----~~~~~~------~~~~ell~~~~id   69 (181)
T d1zh8a1           1 LRKIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV----GNPAVF------DSYEELLESGLVD   69 (181)
T ss_dssp             CCCEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH----SSCEEE------SCHHHHHHSSCCS
T ss_pred             CCCcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccc----ccccee------eeeeccccccccc
Confidence            3456899999 4999986 466666543  467654 4554433 222221    111111      23555554  589


Q ss_pred             EEEEcc
Q 035965           82 GVFHVA   87 (348)
Q Consensus        82 ~Vih~a   87 (348)
                      +|+-+.
T Consensus        70 ~v~I~t   75 (181)
T d1zh8a1          70 AVDLTL   75 (181)
T ss_dssp             EEEECC
T ss_pred             eeeccc
Confidence            888654

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=83.29  E-value=0.59  Score=37.56  Aligned_cols=33  Identities=18%  Similarity=0.141  Sum_probs=29.6

Q ss_pred             eEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcCCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLER-GYIVHATVRDPG   46 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~~~   46 (348)
                      -|+|.|| |.-|...+.+|+++ |++|.++.+.+.
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~   68 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS   68 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence            4999998 99999999999875 999999998764

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.15  E-value=2.4  Score=31.75  Aligned_cols=72  Identities=19%  Similarity=0.109  Sum_probs=45.5

Q ss_pred             CCCeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCccc-cc--cccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEc
Q 035965           10 RSKTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKLQ-IF--SKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHV   86 (348)
Q Consensus        10 ~~~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   86 (348)
                      .+.+||=.|+ | .|. .+..|+++|++|++++.++.... ..  ......+.+++...|+.+...    -..+|+|+-.
T Consensus        30 ~~grvLDiGc-G-~G~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~----~~~fD~I~~~  102 (198)
T d2i6ga1          30 APGRTLDLGC-G-NGR-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF----DGEYDFILST  102 (198)
T ss_dssp             CSCEEEEETC-T-TSH-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC----CCCEEEEEEE
T ss_pred             CCCcEEEECC-C-CCH-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc----cccccEEEEe
Confidence            3458998886 4 555 44577889999999998765331 11  111223467888888776431    1357888855


Q ss_pred             cc
Q 035965           87 AA   88 (348)
Q Consensus        87 a~   88 (348)
                      ..
T Consensus       103 ~~  104 (198)
T d2i6ga1         103 VV  104 (198)
T ss_dssp             SC
T ss_pred             ee
Confidence            44

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.97  E-value=0.96  Score=35.53  Aligned_cols=36  Identities=33%  Similarity=0.437  Sum_probs=30.1

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHHC-CCeEEEEEcC
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLER-GYIVHATVRD   44 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~~-g~~V~~~~r~   44 (348)
                      +.++++|+|-|. |-+|+++++.|.+. |..|+++.-.
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            357899999996 99999999999864 8998887643

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=82.75  E-value=0.42  Score=38.28  Aligned_cols=35  Identities=26%  Similarity=0.336  Sum_probs=29.1

Q ss_pred             CCeEEEeCCCChhHH-----HHHHHHHHCCCeEEEEEcCCC
Q 035965           11 SKTFCVTGANGYIGS-----WLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        11 ~~~ilVtGatGfiG~-----~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      |++|+|+| -|.+|.     +|+..|++.|++|.++|-++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            67899998 787775     556688889999999999875

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=82.72  E-value=0.63  Score=36.74  Aligned_cols=34  Identities=21%  Similarity=0.183  Sum_probs=30.7

Q ss_pred             CeEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCC
Q 035965           12 KTFCVTGANGYIGSWLVKTLLERGYIVHATVRDPG   46 (348)
Q Consensus        12 ~~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~   46 (348)
                      ..|+|.|| |--|...+..|.++|.+|.++.+.+.
T Consensus         5 ~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           5 SENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            35999997 99999999999999999999998764

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.86  E-value=0.66  Score=36.32  Aligned_cols=76  Identities=14%  Similarity=0.198  Sum_probs=53.1

Q ss_pred             CCeEEEeC-CCChhHHHHHHHHHHCCCeEEEEEcCCCcc-ccccccCCCCCeEEEEccCCCcchHHHhhcCCCEEEEccc
Q 035965           11 SKTFCVTG-ANGYIGSWLVKTLLERGYIVHATVRDPGKL-QIFSKWTRSDRLRLFQADLQVEGSFDKAVMGCDGVFHVAA   88 (348)
Q Consensus        11 ~~~ilVtG-atGfiG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~a~   88 (348)
                      +++||=.| |+|+.-++|++. ... -.|++++.++... .+.......+++.++.+|..++.........+|++++...
T Consensus        75 G~~VLDlGcGsG~~~~~la~~-~~~-g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~~~~  152 (230)
T d1g8sa_          75 DSKILYLGASAGTTPSHVADI-ADK-GIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVA  152 (230)
T ss_dssp             TCEEEEESCCSSHHHHHHHHH-TTT-SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred             CCEEEEeCEEcCHHHHHHHHh-CCC-CEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEeecccc
Confidence            56898888 478888888875 333 4999999987644 3333344456888999999998776655555666665433

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=81.86  E-value=0.66  Score=38.68  Aligned_cols=32  Identities=25%  Similarity=0.366  Sum_probs=28.7

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDP   45 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~   45 (348)
                      -|+|.|+ |.-|.-++..|.+.|++|.++-+..
T Consensus         6 DviIVGs-G~aG~v~A~~La~~G~kVlvLEaG~   37 (379)
T d2f5va1           6 DVVIVGS-GPIGCTYARELVGAGYKVAMFDIGE   37 (379)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cEEEECc-CHHHHHHHHHHhhCCCeEEEEecCC
Confidence            4889996 9999999999999999999998753

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=81.83  E-value=0.57  Score=35.84  Aligned_cols=32  Identities=25%  Similarity=0.378  Sum_probs=25.5

Q ss_pred             CeEEEeCCCChhH-----HHHHHHHHHCCCeEEEEEc
Q 035965           12 KTFCVTGANGYIG-----SWLVKTLLERGYIVHATVR   43 (348)
Q Consensus        12 ~~ilVtGatGfiG-----~~l~~~L~~~g~~V~~~~r   43 (348)
                      |+++|||-...+|     .+|++.|.++|++|..++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            6899999643666     4788899999999988863

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=81.67  E-value=4.5  Score=30.10  Aligned_cols=50  Identities=8%  Similarity=0.068  Sum_probs=26.5

Q ss_pred             cCCCEEEEccccCccccccccccccchhhhhhhhhHHHHHHHHHHHhhcCCcceEEEeccc
Q 035965           78 MGCDGVFHVAASMEFDINVKDNIETYVQSTVINPAIQSTLNLLKACLKSESVKRVVLTSSV  138 (348)
Q Consensus        78 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~v~~SS~  138 (348)
                      +..|+||-+.|..........     .. ..+..   ....+++.+++.+  .++|+++..
T Consensus        70 ~~~D~vvi~~G~ND~~~~~~~-----~~-~~~~~---~l~~li~~~~~~~--~~~vl~~~~  119 (208)
T d2o14a2          70 KPGDYFMLQLGINDTNPKHKE-----SE-AEFKE---VMRDMIRQVKAKG--ADVILSTPQ  119 (208)
T ss_dssp             CTTCEEEEECCTGGGCGGGCC-----CH-HHHHH---HHHHHHHHHHTTT--CEEEEECCC
T ss_pred             CCCCEEEEEcCCCcccccccc-----cH-HHHHH---HHHHHHHHHHhcC--Cceeecccc
Confidence            356998888776543221111     11 22333   3456677777766  456666543

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=81.42  E-value=0.78  Score=35.12  Aligned_cols=32  Identities=13%  Similarity=0.136  Sum_probs=29.1

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDP   45 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~   45 (348)
                      -|+|.|| |..|...+.++.+.|.+|.++.+..
T Consensus         5 DvvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           5 DVVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            3889998 9999999999999999999998754

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=81.23  E-value=0.62  Score=39.06  Aligned_cols=31  Identities=23%  Similarity=0.243  Sum_probs=28.0

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcC
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRD   44 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~   44 (348)
                      -++|.|+ |+-|..++..|.+.|++|.++-+.
T Consensus         9 dvIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1           9 PALVIGS-GYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            3788895 999999999999999999999974

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=80.68  E-value=0.56  Score=34.13  Aligned_cols=34  Identities=21%  Similarity=0.110  Sum_probs=27.4

Q ss_pred             eEEEeCCCChhHHHHHHHHHHCCCeEEEEEcCCCcc
Q 035965           13 TFCVTGANGYIGSWLVKTLLERGYIVHATVRDPGKL   48 (348)
Q Consensus        13 ~ilVtGatGfiG~~l~~~L~~~g~~V~~~~r~~~~~   48 (348)
                      ||.+.|- |.+|+.+++.|++.|+.| ...|..++.
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~   35 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKA   35 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHH
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHH
Confidence            6889995 999999999999988865 566665544

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.33  E-value=1.3  Score=34.70  Aligned_cols=35  Identities=23%  Similarity=0.290  Sum_probs=29.9

Q ss_pred             CCCCCeEEEeCCCChhHHHHHHHHHH-CCCeEEEEEc
Q 035965            8 TGRSKTFCVTGANGYIGSWLVKTLLE-RGYIVHATVR   43 (348)
Q Consensus         8 ~~~~~~ilVtGatGfiG~~l~~~L~~-~g~~V~~~~r   43 (348)
                      +.++++|+|-| .|-+|+++++.|.+ .|..|++++-
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            46788999998 59999999999975 5999988774