Citrus Sinensis ID: 035985

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290---
Protein Sequence
NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK
Secondary Structure (PSIPRED)
ccccccHHHccccccccEEEEcccccccccHHHHccccEEEEcccccccccccccHHcHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEccccccccccccccccccHHHHcccccccccEEHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccHHHHHHHHcccHHHHHccccccccccccccEEHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHccccccccccccccccccEEccHHHHHHccccccccHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccHcHHHHHccccccEEEEEEcccccccHHHHHccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEEEcccccccEEEEccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccEEEEEccEEEcccccccccHHHHHHHHHHcccHHHHHHHHcccccccEEEEEEHHHHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHHccccccccccccccccccEEEcHHHHHHcccEEcccHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
NQKKISPLIALQELGELKIfradltdeasfdapisrsdivfhvatpvnfssddpetdmikPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGlvmdeknwtdveflssekpptwgyaaSKTLAERAACKFAQENNIDLItvipslmsgpsltpdipsSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNkrfpeykvptdfgdfpseAKLILSSEKLISEGfcfkygieDIYDQTVEYLKTKGMLK
Flexible Loop (DISEMBL)
nqkkisplialQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILtssaaavsinaqnvtglvmDEKNWTDVEFlssekpptWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK
Low Complexity Region (SEG)
NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK
Disordered region (IsUnstruct)
*******LIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFS*****TDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLK******
Disordered Region (DISOPRED)
*QKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK
Disordered Region (DISEMBL)
NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK
Disordered Region (DISPRO)
*QKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTK****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	293	2.2.26 [Sep-21-2011]
Q9SEV0	340	Anthocyanidin reductase O	yes	no	1.0	0.861	0.627	1e-102
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.965	0.813	0.428	5e-63
P51110	337	Dihydroflavonol-4-reducta	no	no	0.969	0.842	0.420	6e-63
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.965	0.815	0.425	2e-62
P51105	366	Dihydroflavonol-4-reducta	N/A	no	0.959	0.767	0.414	6e-62
P51102	382	Dihydroflavonol-4-reducta	no	no	0.965	0.740	0.408	2e-61
P51106	354	Dihydroflavonol-4-reducta	N/A	no	0.965	0.799	0.391	2e-59
P14720	380	Dihydroflavonol-4-reducta	N/A	no	0.965	0.744	0.397	3e-59
P51104	360	Dihydroflavonol-4-reducta	N/A	no	0.962	0.783	0.408	2e-58
P51103	364	Dihydroflavonol-4-reducta	N/A	no	0.965	0.777	0.414	7e-58

>sp|Q9SEV0|BAN_ARATH Anthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2

 Score =  371 bits (952), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/293 (62%), Positives = 238/293 (81%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           N+KKI+ L  LQELG+LKIF+ADLTDE SF++  S  + +FHVATP+NF S+DPE DMIK
Sbjct: 46  NEKKIAHLRKLQELGDLKIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIK 105

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PAIQGV+NVLK+C K+K+VKRVI TSSAAAVSIN  + TG+VM+E+NWTDVEFL+ EKP 
Sbjct: 106 PAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPF 165

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
            WGY  SK LAE+ A +FA+EN I+L+TVIP+L++G SL  D PSS++L+ + ITG +  
Sbjct: 166 NWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMH 225

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
           + GLK MQ LSGSIS  HV+D+ RAH+FLAEKE+ASGRYICCA NTSVPE+A FL +R+P
Sbjct: 226 VTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRYICCAYNTSVPEIADFLIQRYP 285

Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           +Y V ++F +  S  KL LSS+KLI+EGF F+YGI ++YDQ +EY ++KG++K
Sbjct: 286 KYNVLSEFEEGLSIPKLTLSSQKLINEGFRFEYGINEMYDQMIEYFESKGLIK 338

Involved in the biosynthesis of condensed tannins. Converts cyanidin into (-)-epicatechin as the major product.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 7

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  241 bits (614), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 126/294 (42%), Positives = 183/294 (62%), Gaps = 11/294 (3%)

Query: 1   NQKKISPLIALQEL-GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
           NQKK+  L+ L +    L +++ADL DE SFD  I     VFHVATP++F S DPE ++I
Sbjct: 41  NQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFESKDPENEVI 100

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           KP I G++++LKAC K KTV++++ TSSA   ++N +     V DE NW+DVEF  S K 
Sbjct: 101 KPTINGLLDILKACQKAKTVRKLVFTSSAG--TVNVEEHQKPVYDESNWSDVEFCRSVKM 158

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
             W Y  SKTLAE+AA K+A+ENNID IT+IP+L+ GP L P +P S+    + I  N+ 
Sbjct: 159 TGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNES 218

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
               +K  Q +       H++D+C +HI+L E   A GRYIC + + ++ EL K L +++
Sbjct: 219 HYGIIKQGQYV-------HLDDLCLSHIYLYEHPKAEGRYICSSHDATIHELVKMLREKY 271

Query: 240 PEYKVPTDFGDFPSEAKLI-LSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
           PEY +PT F       + +  SS+KL   GF FKY +ED++   V+  + KG++
Sbjct: 272 PEYNIPTKFKGIDDNLEPVHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLI 325

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  241 bits (614), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 124/295 (42%), Positives = 186/295 (63%), Gaps = 11/295 (3%)

Query: 1   NQKKISPLIALQEL-GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
           N KK+  L+ L +    L +++ADL DE SFD  I     VFHVATP++F S DPE ++I
Sbjct: 41  NVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVI 100

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           KP I+G++ ++K+C   KTV+R++ TSSA  V+I    +   V DE  W+D+EF  ++K 
Sbjct: 101 KPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLP--VYDESCWSDMEFCRAKKM 158

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
             W Y  SKTLAE+AA K+A+ENNID IT+IP+L+ GP +   +P S+  A + ITGN+ 
Sbjct: 159 TAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA 218

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
             + ++  Q +       H++D+C AHI+L E   A GRYIC + +  + +LAK L +++
Sbjct: 219 HYSIIRQGQFV-------HLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKY 271

Query: 240 PEYKVPTDFGDFPSEAK-LILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           PEY +PT+F       K +  SS+KL   GF FKY +ED++   V+  + KG+L+
Sbjct: 272 PEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLR 326

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  239 bits (610), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 125/294 (42%), Positives = 183/294 (62%), Gaps = 11/294 (3%)

Query: 1   NQKKISPLIALQEL-GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
           NQKK+  L+ L +    L +++ADL DE SFD  I     VFHVATP++F S DPE ++I
Sbjct: 41  NQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFESRDPENEVI 100

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           KP I G++++LKAC K KTV++++ TSSA   ++N +     V DE NW+DVEF  S K 
Sbjct: 101 KPTINGLLDILKACQKAKTVRKLVFTSSAG--TVNVEEHQKPVYDESNWSDVEFCRSVKM 158

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
             W Y  SKTLAE+AA K+A+ENNID IT+IP+L+ GP L P +P S+    + I  N+ 
Sbjct: 159 TGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNES 218

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
               +K  Q +       H++D+C +HI+L +   A GRYIC + + ++ EL K L +++
Sbjct: 219 HYGIIKQGQYV-------HLDDLCLSHIYLYKHPKAEGRYICSSHDATIHELVKMLREKY 271

Query: 240 PEYKVPTDFGDFPSEAKLI-LSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
           PEY +PT F       + +  SS+KL   GF FKY +ED++   V+  + KG++
Sbjct: 272 PEYNIPTKFKGIDDNLEPVHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLI 325

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1

 Score =  238 bits (606), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 121/292 (41%), Positives = 184/292 (63%), Gaps = 11/292 (3%)

Query: 3   KKISPLIAL-QELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKP 61
           KK+  L+ L +    LK+++ADLT E SFD  I     VFH+ATP++F S DPE ++IKP
Sbjct: 44  KKVKHLLELPKAQTNLKLWKADLTQEGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKP 103

Query: 62  AIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPT 121
            I+GV++++++C K KTVK+++ TSSA  V  N Q     V DE +W+D++F+ S+K   
Sbjct: 104 TIEGVLSIIRSCVKAKTVKKLVFTSSAGTV--NGQEKQLHVYDESHWSDLDFIYSKKMTA 161

Query: 122 WGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLL 181
           W Y  SKTLAE+AA    + NNI  I++IP+L+ GP +T   P S+  A +LITGN+   
Sbjct: 162 WMYFVSKTLAEKAAWDATKGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITGNEAHY 221

Query: 182 NGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPE 241
           + +K  Q +       H++D+C  HI+L E   A GRYIC + + ++ +LAK +  ++PE
Sbjct: 222 SIIKQGQYV-------HLDDLCECHIYLYENPKAKGRYICSSHDATIHQLAKIIKDKWPE 274

Query: 242 YKVPTDFGDFPSEAKLI-LSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
           Y +PT F     E  ++  SS+KLI  GF FKY +ED++   ++  + KG+L
Sbjct: 275 YYIPTKFPGIDEELPIVSFSSKKLIDTGFEFKYNLEDMFKGAIDTCREKGLL 326

Gerbera hybrida (taxid: 18101)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score =  235 bits (600), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 120/294 (40%), Positives = 186/294 (63%), Gaps = 11/294 (3%)

Query: 1   NQKKISPLIALQELGEL-KIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
           N KK+  L+ L     L  +++ADL++E S+D  I+  D VFHVATP++F S DPE ++I
Sbjct: 41  NLKKVQHLLDLPNAKTLLTLWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVI 100

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           KP + G++ ++KAC K KTV+R + TSSA  V++        V DE +W+D+EF+ S+K 
Sbjct: 101 KPTVNGMLGIMKACVKAKTVRRFVFTSSAGTVNVEEHQKN--VYDENDWSDLEFIMSKKM 158

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
             W Y  SKTLAE+AA  FA+E  +D I++IP+L+ GP +T  +P S+  A + IT N+ 
Sbjct: 159 TGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEA 218

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
             + ++  Q +       H++D+C AHIFL E+ +A GRYIC + + ++  ++KFL  ++
Sbjct: 219 HYSIIRQGQYV-------HLDDLCNAHIFLYEQAAAKGRYICSSHDATILTISKFLRPKY 271

Query: 240 PEYKVPTDFGDFPSEAKLI-LSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
           PEY VP+ F       K I  SS+KL   GF FKY +E+++ +++E  + KG L
Sbjct: 272 PEYNVPSTFEGVDENLKSIEFSSKKLTDMGFNFKYSLEEMFIESIETCRQKGFL 325

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1

 Score =  229 bits (585), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 115/294 (39%), Positives = 183/294 (62%), Gaps = 11/294 (3%)

Query: 1   NQKKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
           N +K  PL+ L    E L I++ADL+++ SF+  I+    VFHVATP++F S DPE ++I
Sbjct: 41  NVEKTKPLLELPGAKERLSIWKADLSEDGSFNEAIAGCTGVFHVATPMDFDSQDPENEVI 100

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           KP ++G++++++AC +  TVKR++ TSSA +V+I  +       D+ NW+D+++    K 
Sbjct: 101 KPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEERPRP--AYDQDNWSDIDYCRRVKM 158

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
             W Y  SK LAE+AA ++A EN +D I++IP+L+ GP L+  +P S+  A  LITGN+ 
Sbjct: 159 TGWMYFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGNEA 218

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
             + LK +Q++       H++D+C A  FL E   A+GRYIC + + ++  LA+ L  RF
Sbjct: 219 HYSILKQVQLV-------HLDDLCDAMTFLFEHPEANGRYICSSHDATIHGLARMLQDRF 271

Query: 240 PEYKVPTDFGDFPSEAKLI-LSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
           PEY +P  F       + I  SS+KL+  GF F+Y  ED++D  +   + KG++
Sbjct: 272 PEYDIPQKFAGVDDNLQPIHFSSKKLLDHGFSFRYTTEDMFDAAIHTCRDKGLI 325

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2

 Score =  228 bits (582), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 117/294 (39%), Positives = 186/294 (63%), Gaps = 11/294 (3%)

Query: 1   NQKKISPLIALQELG-ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
           N+KK+  L+ L +    L +++ADLT E SFD  I     VFHVATP++F S DPE ++I
Sbjct: 51  NKKKVKHLLELPKADTNLTLWKADLTVEGSFDEAIQGCQGVFHVATPMDFESKDPENEVI 110

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           KP ++G+++++++C K  TVKR++ TSSA  + +  Q    L  D+ +W+D++F+ ++K 
Sbjct: 111 KPTVRGMLSIIESCAKANTVKRLVFTSSAGTLDVQEQQ--KLFYDQTSWSDLDFIYAKKM 168

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
             W Y ASK LAE+AA + A++ NID I++IP L+ GP +TP  P S+  A +LITGN+ 
Sbjct: 169 TGWMYFASKILAEKAAMEEAKKKNIDFISIIPPLVVGPFITPTFPPSLITALSLITGNEA 228

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
               +K  Q +       H++D+C AHIFL E   A GR+IC + +  + ++AK + +++
Sbjct: 229 HYCIIKQGQYV-------HLDDLCEAHIFLYEHPKADGRFICSSHHAIIYDVAKMVREKW 281

Query: 240 PEYKVPTDFGDFPSEAKLI-LSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
           PEY VPT+F     +  ++  SS+KL   GF FKY +ED+Y   ++  + K +L
Sbjct: 282 PEYYVPTEFKGIDKDLPVVSFSSKKLTDMGFQFKYTLEDMYKGAIDTCRQKQLL 335

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1

 Score =  226 bits (575), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 120/294 (40%), Positives = 180/294 (61%), Gaps = 12/294 (4%)

Query: 1   NQKKISPLIALQELG-ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
           N KK+  L+ L      L +++ADL +E SFDA +     VFH+ATP++F S DPE +MI
Sbjct: 58  NTKKVQHLLDLPNAKTNLTLWKADLHEEGSFDAAVDGCTGVFHIATPMDFESKDPENEMI 117

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           KP I G++++LK+C K K ++RV+ TSS   V++ A      V DE  W+ ++F+ S K 
Sbjct: 118 KPTINGMLDILKSCVKAK-LRRVVFTSSGGTVNVEATQKP--VYDETCWSALDFIRSVKM 174

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
             W Y  SK LAE+AA K+A ENN++ I++IP L+ GP + P +P S+  A + IT  + 
Sbjct: 175 TGWMYFVSKILAEQAAWKYAAENNLEFISIIPPLVVGPFIMPSMPPSLITALSPITRTES 234

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
               +K  Q +       H++D+C +HIFL E   A+GRYI  A   ++ ++AK L + +
Sbjct: 235 HYTIIKQGQFV-------HLDDLCMSHIFLYENPKANGRYIASACAATIYDIAKMLREEY 287

Query: 240 PEYKVPTDFGDFPSE-AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
           PEY VPT F D+  +  ++  SS+KL   GF FKYG++D+Y   VE  + KG+L
Sbjct: 288 PEYNVPTKFKDYKEDMGQVQFSSKKLTDLGFEFKYGLKDMYTAAVESCRAKGLL 341

Dianthus caryophyllus (taxid: 3570)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51103|DFRA_CALCH Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1

 Score =  224 bits (570), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 122/294 (41%), Positives = 183/294 (62%), Gaps = 11/294 (3%)

Query: 1   NQKKISPLIALQEL-GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
           + KK+  L+ L +    L +++ADLT E SFD  I     VFHVATP++F S DPE ++I
Sbjct: 42  DMKKVKHLLELPKAETNLTLWKADLTQEGSFDEAIEGCHGVFHVATPMDFESKDPENEII 101

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           KP I+G+++++++C K KTVK+++ TSSA  V  N Q     V DE +W+D++F+ S+K 
Sbjct: 102 KPTIEGILSIIRSCAKAKTVKKLVYTSSAGTV--NVQETQLPVYDESHWSDLDFIYSKKM 159

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
             W Y  SKTLAE+AA + A+ENNID +++IP L+ GP + P  P S+  A +LI G + 
Sbjct: 160 TAWMYFVSKTLAEKAAMEAAKENNIDFVSIIPPLVVGPFINPTFPPSLITALSLINGAES 219

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
             + +K  Q +       H++D+C  HIFL E   A GRYIC   + ++ +LA+ + +++
Sbjct: 220 HYSIIKQGQYV-------HLDDLCECHIFLYENPEAKGRYICSKQDATIHQLARMIKQKW 272

Query: 240 PEYKVPTDFGDFPSEAKLI-LSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
           PEY VPT F     E   +  SS+KLI  GF FKY +ED++   ++  K KG L
Sbjct: 273 PEYHVPTQFAGIDEELPTVSFSSKKLIDMGFKFKYDLEDMFKGAIDSCKEKGFL 326

Callistephus chinensis (taxid: 13379)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	293
121755809	336	anthocyanidin reductase [Gossypium hirsu	1.0	0.872	0.815	1e-140
32454758	336	TPA: putative anthocyanidin reductase [G	1.0	0.872	0.815	1e-140
258489646	336	anthocyanidin reductase 2 [Gossypium hir	1.0	0.872	0.812	1e-139
290579515	336	anthocyanidin reductase [Theobroma cacao	1.0	0.872	0.795	1e-138
224078816	335	anthocyanidin reductase [Populus trichoc	0.996	0.871	0.811	1e-138
290579517	336	anthocyanidin reductase [Theobroma cacao	1.0	0.872	0.795	1e-138
294847480	337	anthocyanidin reductase [Camellia sinens	1.0	0.869	0.805	1e-138
326380566	337	anthocyanidin reductase 2 [Camellia sine	1.0	0.869	0.805	1e-138
224116326	335	anthocyanidin reductase [Populus trichoc	0.996	0.871	0.815	1e-138
49861109	337	anthocyanidin reductase [Camellia sinens	1.0	0.869	0.802	1e-137

>gi|121755809|gb|ABM64802.1| anthocyanidin reductase [Gossypium hirsutum]

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 239/293 (81%), Positives = 269/293 (91%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           NQKKIS L+ LQELG+LKIF+ADLTDE SFDAPI+  D+VFHVATPVNF+S+DPE DMIK
Sbjct: 44  NQKKISHLVTLQELGDLKIFQADLTDEGSFDAPIAGCDLVFHVATPVNFASEDPENDMIK 103

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PA QGVVNVLKAC K KTVKRV+LTSSAAAVSIN  + T LVM EK+WTD+EFLSS KPP
Sbjct: 104 PATQGVVNVLKACAKAKTVKRVVLTSSAAAVSINTLDGTDLVMTEKDWTDIEFLSSAKPP 163

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           TWGY ASKTLAE+AA KFA+ENNIDLITVIPSLM+GPSLTP +PSS+ LA +LI+GN+FL
Sbjct: 164 TWGYPASKTLAEKAAWKFAEENNIDLITVIPSLMTGPSLTPIVPSSIGLATSLISGNEFL 223

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
           +N LKGMQMLSGSISI+HVEDVCRAH+FLAEKESASGRYIC AVNTSVPELAKFLNKR+P
Sbjct: 224 INALKGMQMLSGSISITHVEDVCRAHVFLAEKESASGRYICSAVNTSVPELAKFLNKRYP 283

Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           ++KVPTDFGDFPS+ KLI+SSEKLISEGF FKYGIE+IYDQTVEYLK+KG+LK
Sbjct: 284 DFKVPTDFGDFPSKPKLIISSEKLISEGFSFKYGIEEIYDQTVEYLKSKGLLK 336

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|32454758|tpe|CAD91910.1| TPA: putative anthocyanidin reductase [Gossypium arboreum]

 Score =  503 bits (1295), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 239/293 (81%), Positives = 269/293 (91%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           NQKKIS L+ LQELG+LKIF+ADLTDE SFDAPI+  D+VFHVATPVNF+S+DPE DMIK
Sbjct: 44  NQKKISHLVTLQELGDLKIFQADLTDEGSFDAPIAGCDLVFHVATPVNFASEDPENDMIK 103

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PA QGVVNVLKAC K KTVKRV+LTSSAAAVSIN  + T LVM EK+WTD+EFLSS KPP
Sbjct: 104 PATQGVVNVLKACAKAKTVKRVVLTSSAAAVSINTLDGTDLVMTEKDWTDIEFLSSAKPP 163

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           TWGY ASKTLAE+AA KFA+ENNIDLITVIPSLM+GPSLTP +PSS+ LA +LI+GN+FL
Sbjct: 164 TWGYPASKTLAEKAAWKFAEENNIDLITVIPSLMTGPSLTPIVPSSIGLATSLISGNEFL 223

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
           +N LKGMQMLSGSISI+HVEDVCRAH+FLAEKESASGRYIC AVNTSVPELAKFLNKR+P
Sbjct: 224 INALKGMQMLSGSISITHVEDVCRAHVFLAEKESASGRYICSAVNTSVPELAKFLNKRYP 283

Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           ++KVPTDFGDFPS+ KLI+SSEKLISEGF FKYGIE+IYDQTVEYLK+KG+LK
Sbjct: 284 DFKVPTDFGDFPSKPKLIISSEKLISEGFSFKYGIEEIYDQTVEYLKSKGLLK 336

Source: Gossypium arboreum

Species: Gossypium arboreum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|258489646|gb|ACV72641.1| anthocyanidin reductase 2 [Gossypium hirsutum]

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 238/293 (81%), Positives = 268/293 (91%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           NQKKIS L+ LQELG+LKIF+ADLTDE SFDAPI+  D+VFHVATPVNF+S+DPE DMIK
Sbjct: 44  NQKKISHLVTLQELGDLKIFQADLTDEGSFDAPIAGCDLVFHVATPVNFASEDPENDMIK 103

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PA QGVVNVLKAC K KTVKRV+LTSSAAAVSIN  + T LVM EK+WTD+EFLSS KPP
Sbjct: 104 PATQGVVNVLKACAKAKTVKRVVLTSSAAAVSINTLDGTDLVMTEKDWTDIEFLSSAKPP 163

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           TWGY ASKTLAE+AA KFA+ENNIDLITVIPSLM+GPSLTP +PSS+ LA +LI+GN+FL
Sbjct: 164 TWGYPASKTLAEKAAWKFAEENNIDLITVIPSLMTGPSLTPIVPSSIGLATSLISGNEFL 223

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
           +N LKGMQMLSGSISI+HVED CRAH+FLAEKESASGRYIC AVNTSVPELAKFLNKR+P
Sbjct: 224 INALKGMQMLSGSISITHVEDECRAHVFLAEKESASGRYICSAVNTSVPELAKFLNKRYP 283

Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           ++KVPTDFGDFPS+ KLI+SSEKLISEGF FKYGIE+IYDQTVEYLK+KG+LK
Sbjct: 284 DFKVPTDFGDFPSKPKLIISSEKLISEGFSFKYGIEEIYDQTVEYLKSKGLLK 336

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|290579515|gb|ADD51353.1| anthocyanidin reductase [Theobroma cacao]

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 233/293 (79%), Positives = 266/293 (90%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           NQKKI  L+ LQ+LG+LKIFRADLTDE SFD PI+  D+VFHVATPVNF+S DPE DMIK
Sbjct: 44  NQKKIPHLVTLQKLGDLKIFRADLTDEGSFDVPIAGCDLVFHVATPVNFASQDPENDMIK 103

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PAIQGV+NVLKAC K KTVKRV+LTSSAAAVSIN    T LV+ EK+WTDVEFLSS KPP
Sbjct: 104 PAIQGVLNVLKACAKAKTVKRVVLTSSAAAVSINTLEGTDLVLTEKDWTDVEFLSSAKPP 163

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           TWGY ASKTLAE+AA KFAQENNIDLITVIPSLM+GPSLTPD+PSS+ LA +L++GN+FL
Sbjct: 164 TWGYPASKTLAEKAAWKFAQENNIDLITVIPSLMTGPSLTPDVPSSIGLATSLLSGNEFL 223

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
           +N LKGMQMLSGSISI+HVEDVCRAH+FLAEKES SGRYICCAVN+SVPELAKFLN+R+P
Sbjct: 224 VNALKGMQMLSGSISITHVEDVCRAHVFLAEKESGSGRYICCAVNSSVPELAKFLNQRYP 283

Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           E+KVPTDFGDFPS+AKLI+SS+KLI+EGF FK+GIE+IYDQTVEY+  KG+LK
Sbjct: 284 EFKVPTDFGDFPSKAKLIISSDKLINEGFSFKFGIEEIYDQTVEYMNAKGLLK 336

Source: Theobroma cacao

Species: Theobroma cacao

Genus: Theobroma

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078816|ref|XP_002305639.1| anthocyanidin reductase [Populus trichocarpa] gi|118487188|gb|ABK95422.1| unknown [Populus trichocarpa] gi|222848603|gb|EEE86150.1| anthocyanidin reductase [Populus trichocarpa]

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 237/292 (81%), Positives = 266/292 (91%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           NQKK++ LIALQ LG+L IF ADLTDE SF+API+  ++VFHVATPVNF+S+DPE DMIK
Sbjct: 43  NQKKVAHLIALQNLGDLNIFGADLTDEESFNAPIAGCELVFHVATPVNFASEDPENDMIK 102

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PAIQGV NVLKAC K KTVKRVILTSSAAA+SIN  N TGL+MDEKNWTDVEFL+SEKPP
Sbjct: 103 PAIQGVHNVLKACAKAKTVKRVILTSSAAALSINKLNGTGLIMDEKNWTDVEFLTSEKPP 162

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           TWGY ASKTLAE+AA KFA+ENNIDLITVIPSLM+GPSLT DIPSSV L+ +LITGN+FL
Sbjct: 163 TWGYPASKTLAEKAAWKFAEENNIDLITVIPSLMTGPSLTLDIPSSVHLSMSLITGNEFL 222

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
            N LKGMQMLSGSISI+HVEDVCRAHIFLAEKESASGRYICCAVNTSV ELA+FLNKR+P
Sbjct: 223 KNALKGMQMLSGSISITHVEDVCRAHIFLAEKESASGRYICCAVNTSVVELAEFLNKRYP 282

Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
           +Y+VPTDFGDFPS+AKL ++SEKLISEGF FKYGIE++YDQTVEY K KG+L
Sbjct: 283 QYQVPTDFGDFPSKAKLAITSEKLISEGFSFKYGIEEVYDQTVEYFKAKGLL 334

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|290579517|gb|ADD51354.1| anthocyanidin reductase [Theobroma cacao]

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 233/293 (79%), Positives = 266/293 (90%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           NQKKI  L+ LQ+LG+LKIFRADLTDE S D PI+  D+VFHVATPVNF+S DPE DMIK
Sbjct: 44  NQKKIPHLVTLQKLGDLKIFRADLTDEGSLDVPIAGCDLVFHVATPVNFASQDPENDMIK 103

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PAIQGV+NVLKAC K KTVKRV+LTSSAAAVSIN    T LV+ EK+WTDVEFLSS KPP
Sbjct: 104 PAIQGVLNVLKACAKAKTVKRVVLTSSAAAVSINTLKGTDLVLTEKDWTDVEFLSSAKPP 163

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           TWGY ASKTLAE+AA KFAQENNIDLITVIPSLM+GPSLTPD+PSS+ LA +L++GN+FL
Sbjct: 164 TWGYPASKTLAEKAAWKFAQENNIDLITVIPSLMTGPSLTPDVPSSIGLATSLLSGNEFL 223

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
           +N LKGMQMLSGSISI+HVEDVCRAH+FLAEKESASGRYICCAVN+SVPELAKFLN+R+P
Sbjct: 224 VNALKGMQMLSGSISITHVEDVCRAHVFLAEKESASGRYICCAVNSSVPELAKFLNQRYP 283

Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           E+KVPTDFGDFPS+AKLI+SS+KLI+EGF FK+GIE+IYDQTVEY+  KG+LK
Sbjct: 284 EFKVPTDFGDFPSKAKLIISSDKLINEGFSFKFGIEEIYDQTVEYMNAKGLLK 336

Source: Theobroma cacao

Species: Theobroma cacao

Genus: Theobroma

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|294847480|gb|ADF43751.1| anthocyanidin reductase [Camellia sinensis]

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 236/293 (80%), Positives = 262/293 (89%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           NQKK S L+AL+  G LKIFRADLTDE SFD P++  D+VFHVATPVNF+S+DPE DMIK
Sbjct: 44  NQKKTSHLLALKGSGNLKIFRADLTDEQSFDTPVAGCDLVFHVATPVNFASEDPENDMIK 103

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PAIQGVVNVLKAC K  TVKRVILTSSAAAVSIN  N TGLVMDE +WTD EFL+S KPP
Sbjct: 104 PAIQGVVNVLKACAKAGTVKRVILTSSAAAVSINKLNGTGLVMDESHWTDTEFLNSAKPP 163

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           TWGY  SKTLAE+AA KFA+ENNI+LITVIP+LM+GPSLT D+PSS+ LA +LITGN+FL
Sbjct: 164 TWGYPLSKTLAEKAAWKFAEENNINLITVIPTLMAGPSLTADVPSSIGLAMSLITGNEFL 223

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
           +NGLKGMQMLSGSISISHVEDVCRAH+F+AEKESASGRYICCAVNTSVPELAKFLNKR+P
Sbjct: 224 INGLKGMQMLSGSISISHVEDVCRAHVFVAEKESASGRYICCAVNTSVPELAKFLNKRYP 283

Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           EY VPTDFGDFPS+AKLILSSEKL  EGF FKYGIE+IYDQ+VEY K KG+LK
Sbjct: 284 EYNVPTDFGDFPSKAKLILSSEKLTKEGFSFKYGIEEIYDQSVEYFKAKGILK 336

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326380566|gb|ADZ58166.1| anthocyanidin reductase 2 [Camellia sinensis]

 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 236/293 (80%), Positives = 262/293 (89%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           NQKK S L+AL+  G LKIFRADLTDE SFDAP++  D+VFHVATPVNF+S+DPE DMIK
Sbjct: 44  NQKKTSHLLALKGSGNLKIFRADLTDEQSFDAPVAGCDLVFHVATPVNFASEDPENDMIK 103

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PAIQGVVNVLKAC K  TVKRVILTSSAAAVSIN  N TGLVMDE +WTD EFL+S KPP
Sbjct: 104 PAIQGVVNVLKACAKAGTVKRVILTSSAAAVSINKLNGTGLVMDESHWTDTEFLNSAKPP 163

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           TWGY  SKTLAE+AA K A+ENNI+LITVIP+LM+GPSLT D+PSS+ LA +LITGN+FL
Sbjct: 164 TWGYPLSKTLAEKAAWKVAEENNINLITVIPTLMAGPSLTADVPSSIGLAMSLITGNEFL 223

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
           +NGLKGMQMLSGSISISHVEDVCRAH+F+AEKESASGRYICCAVNTSVPELAKFLNKR+P
Sbjct: 224 INGLKGMQMLSGSISISHVEDVCRAHVFVAEKESASGRYICCAVNTSVPELAKFLNKRYP 283

Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           EY VPTDFGDFPS+AKLILSSEKL  EGF FKYGIE+IYDQ+VEY K KG+LK
Sbjct: 284 EYNVPTDFGDFPSKAKLILSSEKLTKEGFSFKYGIEEIYDQSVEYFKAKGILK 336

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116326|ref|XP_002317270.1| anthocyanidin reductase [Populus trichocarpa] gi|222860335|gb|EEE97882.1| anthocyanidin reductase [Populus trichocarpa]

 Score =  495 bits (1275), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 238/292 (81%), Positives = 262/292 (89%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           NQKKI+ LIALQ LG+L IF ADLT+E SF+API+  D+VFHVATPVNF+S+DPE DMIK
Sbjct: 43  NQKKIAHLIALQNLGDLNIFGADLTNEESFNAPIACCDLVFHVATPVNFASEDPENDMIK 102

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PAIQGV NVLKAC K KTV+RVILTSSAAAVSIN  N TGLVMDEKNWTDVEFL+SEKPP
Sbjct: 103 PAIQGVHNVLKACAKAKTVQRVILTSSAAAVSINKLNGTGLVMDEKNWTDVEFLTSEKPP 162

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           TWGY ASKTLAE+AA KFA+ENNIDLITVIPSLM+GPS TP IP S+ LA +LITGN FL
Sbjct: 163 TWGYPASKTLAEKAAWKFAEENNIDLITVIPSLMTGPSFTPHIPDSINLAMSLITGNKFL 222

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
           +NGLKGMQMLSGSISI+HVEDVCRAHIFLAEKESASGRYICC VNTSV ELAKFLNKR+P
Sbjct: 223 INGLKGMQMLSGSISITHVEDVCRAHIFLAEKESASGRYICCGVNTSVVELAKFLNKRYP 282

Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
           +Y+VPTD GDFPSEAKLI++SEKL SEGF FKYGIE+IYDQTVEY K  G+L
Sbjct: 283 QYQVPTDCGDFPSEAKLIITSEKLSSEGFSFKYGIEEIYDQTVEYFKANGLL 334

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|49861109|gb|AAT68773.1| anthocyanidin reductase [Camellia sinensis]

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 235/293 (80%), Positives = 262/293 (89%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           NQKK S L+AL+  G LKIFRADLTDE SFD P++  D+VFHVATPVNF+S+DPE DMIK
Sbjct: 44  NQKKTSHLLALKGSGNLKIFRADLTDEQSFDTPVAGCDLVFHVATPVNFASEDPENDMIK 103

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PAIQGVVNVLKAC K  TVKRVILTSSAAAVSIN  N TGLVMDE +WTD EFL+S KPP
Sbjct: 104 PAIQGVVNVLKACAKAGTVKRVILTSSAAAVSINKLNGTGLVMDESHWTDTEFLNSAKPP 163

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           TWGY  SKTLAE+AA KFA+ENNI+LITVIP+LM+GPSLT D+PSS+ LA +LITGN+FL
Sbjct: 164 TWGYPLSKTLAEKAAWKFAEENNINLITVIPTLMAGPSLTADVPSSIGLAMSLITGNEFL 223

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
           +NGLKGMQMLSGSISISHVEDVCRAH+F+AEKESASGRYICCAV+TSVPELAKFLNKR+P
Sbjct: 224 INGLKGMQMLSGSISISHVEDVCRAHVFVAEKESASGRYICCAVSTSVPELAKFLNKRYP 283

Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           EY VPTDFGDFPS+AKLILSSEKL  EGF FKYGIE+IYDQ+VEY K KG+LK
Sbjct: 284 EYNVPTDFGDFPSKAKLILSSEKLTKEGFSFKYGIEEIYDQSVEYFKAKGILK 336

Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	293
TAIR|locus:2195733	340	BAN "BANYULS" [Arabidopsis tha	1.0	0.861	0.627	4.7e-96
TAIR|locus:2165427	382	DFR "dihydroflavonol 4-reducta	0.965	0.740	0.408	1.7e-57
TAIR|locus:2122093	326	DRL1 "dihydroflavonol 4-reduct	0.955	0.858	0.392	8.8e-47
TAIR|locus:2050882	364	BEN1 [Arabidopsis thaliana (ta	0.972	0.782	0.377	2.1e-45
TAIR|locus:2131734	354	AT4G27250 [Arabidopsis thalian	0.928	0.768	0.396	2.7e-45
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.948	0.855	0.360	4.8e-39
TAIR|locus:2012315	322	AT1G09510 [Arabidopsis thalian	0.938	0.854	0.378	1.3e-38
TAIR|locus:2033394	319	AT1G66800 [Arabidopsis thalian	0.931	0.855	0.389	5.5e-38
TAIR|locus:2012265	322	AT1G09490 [Arabidopsis thalian	0.941	0.857	0.375	6.3e-37
TAIR|locus:2150315	326	AT5G19440 [Arabidopsis thalian	0.931	0.837	0.368	3.5e-36

TAIR|locus:2195733 BAN "BANYULS" [Arabidopsis thaliana (taxid:3702)]

 Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
 Identities = 184/293 (62%), Positives = 238/293 (81%)

Query:     1 NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
             N+KKI+ L  LQELG+LKIF+ADLTDE SF++  S  + +FHVATP+NF S+DPE DMIK
Sbjct:    46 NEKKIAHLRKLQELGDLKIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIK 105

Query:    61 PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
             PAIQGV+NVLK+C K+K+VKRVI TSSAAAVSIN  + TG+VM+E+NWTDVEFL+ EKP 
Sbjct:   106 PAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPF 165

Query:   121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
              WGY  SK LAE+ A +FA+EN I+L+TVIP+L++G SL  D PSS++L+ + ITG +  
Sbjct:   166 NWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMH 225

Query:   181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
             + GLK MQ LSGSIS  HV+D+ RAH+FLAEKE+ASGRYICCA NTSVPE+A FL +R+P
Sbjct:   226 VTGLKEMQKLSGSISFVHVDDLARAHLFLAEKETASGRYICCAYNTSVPEIADFLIQRYP 285

Query:   241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
             +Y V ++F +  S  KL LSS+KLI+EGF F+YGI ++YDQ +EY ++KG++K
Sbjct:   286 KYNVLSEFEEGLSIPKLTLSSQKLINEGFRFEYGINEMYDQMIEYFESKGLIK 338

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0033729 "anthocyanidin reductase activity" evidence=IDA

GO:0009964 "negative regulation of flavonoid biosynthetic process" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=ISS

TAIR|locus:2165427 DFR "dihydroflavonol 4-reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
 Identities = 120/294 (40%), Positives = 186/294 (63%)

Query:     1 NQKKISPLIALQELGEL-KIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
             N KK+  L+ L     L  +++ADL++E S+D  I+  D VFHVATP++F S DPE ++I
Sbjct:    41 NLKKVQHLLDLPNAKTLLTLWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVI 100

Query:    60 KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
             KP + G++ ++KAC K KTV+R + TSSA  V++        V DE +W+D+EF+ S+K 
Sbjct:   101 KPTVNGMLGIMKACVKAKTVRRFVFTSSAGTVNVEEHQKN--VYDENDWSDLEFIMSKKM 158

Query:   120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
               W Y  SKTLAE+AA  FA+E  +D I++IP+L+ GP +T  +P S+  A + IT N+ 
Sbjct:   159 TGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEA 218

Query:   180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
               + ++  Q +       H++D+C AHIFL E+ +A GRYIC + + ++  ++KFL  ++
Sbjct:   219 HYSIIRQGQYV-------HLDDLCNAHIFLYEQAAAKGRYICSSHDATILTISKFLRPKY 271

Query:   240 PEYKVPTDFGDFPSEAKLI-LSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
             PEY VP+ F       K I  SS+KL   GF FKY +E+++ +++E  + KG L
Sbjct:   272 PEYNVPSTFEGVDENLKSIEFSSKKLTDMGFNFKYSLEEMFIESIETCRQKGFL 325

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042406 "extrinsic to endoplasmic reticulum membrane" evidence=TAS

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA;IMP;TAS

GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=IMP;TAS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 115/293 (39%), Positives = 172/293 (58%)

Query:     1 NQKKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
             N+KK++ L  L+   E L++ +ADL +E SFD  I     VFH A+PV   + +PE +++
Sbjct:    41 NEKKLAHLWKLEGAKERLRLVKADLMEEGSFDNAIMGCQGVFHTASPVLKPTSNPEEEIL 100

Query:    60 KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
             +PAI+G +NVL++C K  ++KRV+LTSS++ V I       + +DE  WT VE    ++ 
Sbjct:   101 RPAIEGTLNVLRSCRKNPSLKRVVLTSSSSTVRIRDDFDPKIPLDESIWTSVELC--KRF 158

Query:   120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
               W YA SKTLAE+AA KF++EN IDL+TV+PS + GPSL PD+ S+    A+ + G   
Sbjct:   159 QVW-YALSKTLAEQAAWKFSEENGIDLVTVLPSFLVGPSLPPDLCST----ASDVLG--- 210

Query:   180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
             LL G        G +   H++DV R HI + E E+A GRYIC +   S+ EL  FL+ R+
Sbjct:   211 LLKGETEKFQWHGQMGYVHIDDVARTHIVVFEHEAAQGRYICSSNVISLEELVSFLSARY 270

Query:   240 PEYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
             P   +P  F    +       + K+ S G  FK  +E+++D  +  L  +G L
Sbjct:   271 PSLPIPKRFEKL-NRLHYDFDTSKIQSLGLKFK-SLEEMFDDCIASLVEQGYL 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

TAIR|locus:2050882 BEN1 [Arabidopsis thaliana (taxid:3702)]

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 112/297 (37%), Positives = 173/297 (58%)

Query:     1 NQKKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
             N+K IS L  L    E L+IF ADL +  SF   I     VFHVA P++ +S++ E  + 
Sbjct:    75 NKKDISYLTELPFASERLQIFTADLNEPESFKPAIEGCKAVFHVAHPMDPNSNETEETVT 134

Query:    60 KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGL-VMDEKNWTDVEFLSS-- 116
             K  +QG++ +LK+C   KTVKR   TSSA  V  +  N  G   +DE  W+DVE   +  
Sbjct:   135 KRTVQGLMGILKSCLDAKTVKRFFYTSSAVTVFYSGGNGGGGGEVDESVWSDVEVFRNQK 194

Query:   117 EKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITG 176
             EK  +  Y  SK  AE AA +F  +N ++++T++  L+ GP ++  +PSSV ++  ++ G
Sbjct:   195 EKRVSSSYVVSKMAAETAALEFGGKNGLEVVTLVIPLVVGPFISSSLPSSVFISLAMLFG 254

Query:   177 NDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLN 236
             N       K  + L  + ++ H++DV RA IFL EK  A GRYIC +V   + E+ +FL+
Sbjct:   255 N------YKE-KYLFDTYNMVHIDDVARAMIFLLEKPVAKGRYICSSVEMKIDEVFEFLS 307

Query:   237 KRFPEYKVPT-DFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
              +FP++++P+ D   +  E ++ LSS+KL S GF FKYG E+I+   +   + +G L
Sbjct:   308 TKFPQFQLPSIDLNKYKVEKRMGLSSKKLKSAGFEFKYGAEEIFSGAIRSCQARGFL 364

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009813 "flavonoid biosynthetic process" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0010422 "regulation of brassinosteroid biosynthetic process" evidence=IMP

GO:0016131 "brassinosteroid metabolic process" evidence=IMP

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2131734 AT4G27250 [Arabidopsis thaliana (taxid:3702)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 113/285 (39%), Positives = 169/285 (59%)

Query:    12 QELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNF--SSDDP------ETDMIKPAI 63
             +E   L++FRADL D+ SFD  +   D VFHVA  + F  SSD        ++ +I+PA+
Sbjct:    55 KENERLRLFRADLRDDGSFDDAVKGCDGVFHVAASMEFDISSDHVNLESYVQSKVIEPAL 114

Query:    64 QGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVT-GLVMDEKNWTDVEFLSSEKPPTW 122
             +GV NVL +C K+K+VKRV+ TSS + ++   +N      +DE     V+ +   +   W
Sbjct:   115 KGVRNVLSSCLKSKSVKRVVFTSSISTLTAKDENERMRSFVDETCKAHVDHVLKTQASGW 174

Query:   123 GYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLN 182
              Y  SK ++E  A ++A+E  +DL++VI + +SGP LTP +PSSV +  + ITG+  L  
Sbjct:   175 IYVLSKLVSEEEAFRYAKERGMDLVSVITTTVSGPFLTPFVPSSVQVLLSPITGDSKLFA 234

Query:   183 GLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELA-KFLNKRF-- 239
              L  +    GSI++ H+ED+CRAH+FL E+  A G+YICC  N  + EL     +K +  
Sbjct:   235 ILSAVNKRMGSIALVHIEDICRAHLFLMEQPKAKGQYICCVDNIDMHELMLHHFSKDYLC 294

Query:   240 PEYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVE 284
                KV  D  +     K I+SS+KL   GF +KYGIE+I DQT++
Sbjct:   295 KVQKVNEDEEEREC-MKPIISSKKLRELGFEYKYGIEEIVDQTID 338

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009062 "fatty acid catabolic process" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 106/294 (36%), Positives = 159/294 (54%)

Query:     3 KKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKP 61
             +K   L+AL+   E LK+F+A+L +E SFD+ I   + VFH A+P      DP+ +++ P
Sbjct:    44 RKTEHLLALEGAEERLKLFKANLLEEGSFDSAIDGCEGVFHTASPFYHDVKDPQAELLDP 103

Query:    62 AIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTG-LVMDEKNWTDVEFLSSEKPP 120
             A++G +NVL +C KT +VKRV+LTSS AAV+ N    T   ++DE  + D ++  + K  
Sbjct:   104 AVKGTINVLSSCLKTSSVKRVVLTSSIAAVAFNGMPRTPETIVDETWFADPDYCRASK-- 161

Query:   121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
              W Y  SKTLAE AA KFA+ENN+ L+++ P+++ GP L P + +S A   +LI G    
Sbjct:   162 LW-YVLSKTLAENAAWKFAKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKGAQTF 220

Query:   181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
              N   G           +V+DV  AHI   E   A GRY          E+   L+  +P
Sbjct:   221 PNATFGWV---------NVKDVANAHIQAFENPDADGRYCLVERVAHYSEVVNILHDLYP 271

Query:   241 EYKVPTDFGDFPSEAKLI-LSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
             ++++P    D         +S EK  S G  F   +E    +TVE L+ KG ++
Sbjct:   272 DFQLPEKCADEKIYIPTYKVSKEKAESLGVEF-VPLEVSIKETVESLRDKGFIR 324

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)]

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 111/293 (37%), Positives = 161/293 (54%)

Query:     1 NQKKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
             ++KK   L+AL    E LK+F+ADL +E SF+  I   D VFH A+PV+ +  DP+ ++I
Sbjct:    41 DEKKTEHLLALDGAKEKLKLFKADLLEEGSFEQAIEGCDAVFHTASPVSLTVTDPQIELI 100

Query:    60 KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNV-TGLVMDEKNWTDVEFLSSEK 118
              PA++G +NVLK C K  +VKRVI+TSS AAV      +    ++DE  ++D  F + +K
Sbjct:   101 DPAVKGTLNVLKTCAKVSSVKRVIVTSSMAAVLFREPTLGPNDLVDESCFSDPNFCTEKK 160

Query:   119 PPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGND 178
                W YA SKTLAE  A +FA+E  +DL+ + P L+ GP L P +  SV +   LITG D
Sbjct:   161 --LW-YALSKTLAEDEAWRFAKEKGLDLVVINPGLVLGPLLKPSLTFSVNVIVELITGKD 217

Query:   179 FLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKR 238
               +N  K  +++        V DV  AHI   E  SA+GRYI      ++ ++ K L + 
Sbjct:   218 NFIN--KDFRLVD-------VRDVALAHIKAFETPSANGRYIIEGPVVTINDIEKILREF 268

Query:   239 FPEYKVPTDFGDFPSEAKLI--LSSEKLISEGFCFKYGIEDIYDQTVEYLKTK 289
             FP+  +    G+      +I  L  EK+ S G  F      + D T+  LK K
Sbjct:   269 FPDLNLGNK-GEASEIIPVIYKLCVEKVKSLGIEFTPTEATLRD-TILSLKEK 319

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2033394 AT1G66800 [Arabidopsis thaliana (taxid:3702)]

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 114/293 (38%), Positives = 160/293 (54%)

Query:     3 KKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKP 61
             KK + L+ L+   E LK+F++DL +E SFD  I   D VFH A+PV+ +  DP+T+MI P
Sbjct:    43 KKTNHLLTLEGASERLKLFKSDLLEEGSFDQAIEGCDGVFHTASPVSLTVTDPQTEMIDP 102

Query:    62 AIQGVVNVLKACTKTKTVKRVILTSSAAA-VSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
             A+ G +NVL+ C K  +VKRVI+TSS AA +SIN  +V    +DE  +TD+    + K  
Sbjct:   103 AVNGTLNVLRTCAKVSSVKRVIVTSSTAATLSINPNDV----VDETVFTDLSVYLAMK-- 156

Query:   121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
              W Y  SKTLAE  A +FA+EN IDL+ + P  + GP L P +  SV +   LI G +  
Sbjct:   157 AW-YGYSKTLAEETAWRFAKENGIDLVVMNPGNVIGPVLQPTLNYSVEVIVDLINGKN-- 213

Query:   181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
                       S       V DV  AHI   E  SASGRYI    + ++ ++ K L++ FP
Sbjct:   214 -------PSNSFYYRFMDVRDVSLAHIKAFEVPSASGRYILADPDVTMKDIQKLLHELFP 266

Query:   241 EY-KVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
             +  +V  D  +   E    +  +KL S G  F    E + D TV  LK + +L
Sbjct:   267 DLCRVDKDNENEVGEMAYKVCVDKLKSLGIEFTPIKESLKD-TVVSLKERCLL 318

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2012265 AT1G09490 [Arabidopsis thaliana (taxid:3702)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 112/298 (37%), Positives = 159/298 (53%)

Query:     1 NQKKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
             ++KK   L+AL    E LK+F+ADL +E+SFD  I   D VFH A+PV F+  DP+T++I
Sbjct:    41 DKKKTEHLLALDGAKERLKLFKADLLEESSFDQAIDGCDAVFHTASPVLFTVTDPQTELI 100

Query:    60 KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGL--VMDEKNWTDVEFLSSE 117
              PA++G +NVL  C +  +VKRVILTSS AAV ++ Q   G   ++DE  ++D       
Sbjct:   101 DPALKGTINVLNTCKQVSSVKRVILTSSTAAV-LSRQPPIGPNDLVDETFFSDPSLCRET 159

Query:   118 KPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITG- 176
             K   W Y+ SK LAE AA +FA++N ID++ + P  + GP L P +  SV L    I G 
Sbjct:   160 K--NW-YSLSKILAENAAWQFAKDNGIDMVVLNPGFICGPLLQPTLNMSVELIVDFINGK 216

Query:   177 NDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLN 236
             N F     +           S V DV   HI   E  SA+GRYI    N SV ++   L 
Sbjct:   217 NPFNKRYYR----------FSDVRDVALVHIKALETPSANGRYIIDGPNMSVNDIIDILR 266

Query:   237 KRFPEYKVPTDFGDFPSEAKLI--LSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
             K FP+  +  D  +     ++I  +  EK+ + G  F      + D T+  LK K +L
Sbjct:   267 KLFPDLSI-ADTNEESEMNEMICQVCVEKVKNLGVEFTPMKSSLRD-TIVSLKEKCLL 322

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)]

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 108/293 (36%), Positives = 159/293 (54%)

Query:     3 KKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKP 61
             KK   L++L+   E L +F+ADL ++ SFD+ I     VFH A+P    + DP+ ++I P
Sbjct:    45 KKTQHLVSLEGAKERLHLFKADLLEQGSFDSAIDGCHGVFHTASPFFNDAKDPQAELIDP 104

Query:    62 AIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNW-TDVEFLSSEKPP 120
             A++G +NVL +C K  +VKRV++TSS AAV  N +  T  V  ++ W +D E   + K  
Sbjct:   105 AVKGTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKPRTPDVTVDETWFSDPELCEASK-- 162

Query:   121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
              W Y  SKTLAE AA K A+E  +D++T+ P+++ GP L P + +S   AA ++     L
Sbjct:   163 MW-YVLSKTLAEDAAWKLAKEKGLDIVTINPAMVIGPLLQPTLNTS---AAAILN----L 214

Query:   181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSV--PELAKFLNKR 238
             +NG K    LS      +V+DV  AHI   E  SA+GRY  C V   V   E+   L + 
Sbjct:   215 INGAKTFPNLS--FGWVNVKDVANAHIQAFEVPSANGRY--CLVERVVHHSEIVNILREL 270

Query:   239 FPEYKVPTDFGDF-PSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKG 290
             +P   +P    D  P      +S +K  S G  +   ++    +TVE LK KG
Sbjct:   271 YPNLPLPERCVDENPYVPTYQVSKDKTRSLGIDY-IPLKVSIKETVESLKEKG 322

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SEV0	BAN_ARATH	1, ., 3, ., 1, ., 7, 7	0.6279	1.0	0.8617	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.3.1	0.963

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	ANR/BAN1	SubName- Full=Putative uncharacterized protein; (335 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	ANS2	SubName- Full=Putative uncharacterized protein; (349 aa)						•	•		0.947
	ANS1	anthocyanidin synthase (EC-1.14.11.19) (361 aa)						•	•		0.928
	CHI1	SubName- Full=Putative uncharacterized protein; (224 aa)							•		0.510
	FLS6	flavonol synthase (111 aa)							•		0.508
	CHS	SubName- Full=Chalcone synthase (Putative uncharacterized protein);; The primary product of thi [...] (397 aa)							•		0.507

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	293
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	0.0
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-114
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	1e-111
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	4e-91
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	3e-73
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	1e-60
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	5e-59
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	6e-43
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	9e-43
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	1e-35
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	3e-28
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	2e-24
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	1e-21
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	4e-18
cd08946	200	cd08946, SDR_e, extended (e) SDRs	2e-17
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-16
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	3e-16
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	3e-13
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	3e-12
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	1e-10
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	2e-10
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	8e-10
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	1e-07
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	8e-07
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	2e-06
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	3e-06
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	6e-06
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	9e-06
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	1e-05
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	1e-05
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	9e-05
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	1e-04
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-04
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	4e-04
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	7e-04
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	8e-04
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	0.002
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	0.002
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	0.002
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	0.003

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  539 bits (1389), Expect = 0.0
 Identities = 242/293 (82%), Positives = 271/293 (92%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           NQKKI+ L ALQELG+LKIF ADLTDE SF+API+  D+VFHVATPVNF+S+DPE DMIK
Sbjct: 45  NQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIK 104

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PAIQGV NVLKAC K K+VKRVILTSSAAAVSIN  + TGLVM+EKNWTDVEFL+SEKPP
Sbjct: 105 PAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP 164

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           TWGY ASKTLAE+AA KFA+ENNIDLITVIP+LM+GPSLT DIPSS++LA +LITGN+FL
Sbjct: 165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFL 224

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
           +NGLKGMQMLSGSISI+HVEDVCRAHIFLAEKESASGRYICCA NTSVPELAKFL KR+P
Sbjct: 225 INGLKGMQMLSGSISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYP 284

Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           +Y+VPTDFGDFPS+AKLI+SSEKLISEGF F+YGIE+IYDQTVEY K KG+LK
Sbjct: 285 QYQVPTDFGDFPSKAKLIISSEKLISEGFSFEYGIEEIYDQTVEYFKAKGLLK 337

Length = 338

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  330 bits (848), Expect = e-114
 Identities = 133/271 (49%), Positives = 180/271 (66%), Gaps = 13/271 (4%)

Query: 1   NQKKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
           ++KK++ L+ L+   E LK+F+ADL D  SFDA I   D VFHVA+PV+F S+DPE +MI
Sbjct: 34  DEKKVAHLLELEGAKERLKLFKADLLDYGSFDAAIDGCDGVFHVASPVDFDSEDPEEEMI 93

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           +PA++G +NVL+AC K K+VKRV+ TSS AAV  N     G V+DE  W+D++F    K 
Sbjct: 94  EPAVKGTLNVLEACAKAKSVKRVVFTSSVAAVVWNPNRGEGKVVDESCWSDLDF---CKK 150

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
               YA SKTLAE+AA +FA+EN +DL+TV PSL+ GP L P + SS  L  +L+ GN  
Sbjct: 151 TKLWYALSKTLAEKAAWEFAEENGLDLVTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAE 210

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
           +          +GS+++ HV+DV  AHI L EK SASGRYIC +   + PELA  L K++
Sbjct: 211 MYQ--------NGSLALVHVDDVADAHILLYEKPSASGRYICSSHVVTRPELAALLAKKY 262

Query: 240 PEYKVPTDFGD-FPSEAKLILSSEKLISEGF 269
           P+Y +PT F D  P  A++ LSS+KL   GF
Sbjct: 263 PQYNIPTKFEDDQPGVARVKLSSKKLKDLGF 293

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  323 bits (829), Expect = e-111
 Identities = 132/268 (49%), Positives = 158/268 (58%), Gaps = 7/268 (2%)

Query: 1   NQKKISPLIALQEL-GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
             KK++ L+ L    G L++  ADLTDE SFD  I     VFHVATPV+FSS DP  ++I
Sbjct: 34  KVKKVNHLLDLDAKPGRLELAVADLTDEQSFDEVIKGCAGVFHVATPVSFSSKDP-NEVI 92

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           KPAI G +N LKA    K+VKR +LTSSA +V I   NV G+V+DEK+W   EF S  K 
Sbjct: 93  KPAIGGTLNALKAAAAAKSVKRFVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKK 152

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
             W YAASKTLAE+AA KFA ENNIDLITVIP+L  G     + PSS   A +LITGN+ 
Sbjct: 153 SAWVYAASKTLAEKAAWKFADENNIDLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEG 212

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
           +   L     L       HV D+C AHI   E   A GRYIC A N     L K L K++
Sbjct: 213 VSPALA----LIPPGYYVHVVDICLAHIGCLELPIARGRYICTAGNFDWNTLLKTLRKKY 268

Query: 240 PEYKVPTDFGDFPSEAKLILSSEKLISE 267
           P Y  PTDF D   +     SS KL+  
Sbjct: 269 PSYTFPTDFPD-QGQDLSKFSSAKLLEI 295

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  274 bits (701), Expect = 4e-91
 Identities = 121/294 (41%), Positives = 184/294 (62%), Gaps = 11/294 (3%)

Query: 1   NQKKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
           N KK+  L+ L      L +++ADL  E SFD  I     VFHVATP++F S DPE ++I
Sbjct: 41  NVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVI 100

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           KP + G+++++KAC K KTV+R++ TSSA  V++        V DE  W+D++F   +K 
Sbjct: 101 KPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKP--VYDEDCWSDLDFCRRKKM 158

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
             W Y  SKTLAE+AA K+A EN +D I++IP+L+ GP ++  +P S+  A +LITGN+ 
Sbjct: 159 TGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEA 218

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
             + +K  Q +       H++D+C AHIFL E  +A GRYIC + + ++ +LAK L +++
Sbjct: 219 HYSIIKQGQFV-------HLDDLCNAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKY 271

Query: 240 PEYKVPTDFGDFPSEAKLI-LSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
           PEY +P  F     + K +  SS+KL   GF FKY +ED++D  +E  + KG++
Sbjct: 272 PEYNIPARFPGIDEDLKSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLI 325

Length = 351

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  228 bits (583), Expect = 3e-73
 Identities = 117/279 (41%), Positives = 170/279 (60%), Gaps = 14/279 (5%)

Query: 17  LKIFRADLTDEASFDAPISRSDIVFHVATPVNF--SSDDP------ETDMIKPAIQGVVN 68
           L++FRADL +E SFD  +   D VFHVA  + F  SSD        ++ +I PAI+G +N
Sbjct: 60  LRLFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLN 119

Query: 69  VLKACTKTKTVKRVILTSSAAAVSINAQNVTG---LVMDEKNWTDVEFLSSEKPPTWGYA 125
           VLK+C K+KTVKRV+ TSS +  ++ A++  G    V+DE   T ++ + + K   W Y 
Sbjct: 120 VLKSCLKSKTVKRVVFTSSIS--TLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYV 177

Query: 126 ASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLK 185
            SK L E AA K+A+EN IDL++VI + ++GP LTP +PSS+ +  + ITG+  L + L 
Sbjct: 178 LSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILS 237

Query: 186 GMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVP 245
            +    GSI++ H+ED+C AHIFL E+  A GRYICC  +  + EL   L+K +P   + 
Sbjct: 238 AVNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQ 297

Query: 246 TDF-GDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTV 283
                +        +SS+KL   GF +KYGIE+I DQT+
Sbjct: 298 VRLDEEKRGSIPSEISSKKLRDLGFEYKYGIEEIIDQTI 336

Length = 353

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  194 bits (496), Expect = 1e-60
 Identities = 115/296 (38%), Positives = 159/296 (53%), Gaps = 20/296 (6%)

Query: 3   KKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKP 61
           KK   L+AL    E L +F+A+L +E SFD+ +   + VFH A+P      DP+ ++I P
Sbjct: 42  KKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDP 101

Query: 62  AIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVT-GLVMDEKNWTDVEFLSSEKPP 120
           A++G +NVL++C K  +VKRV++TSS AAV+ N + +T  +V+DE  ++D  F    K  
Sbjct: 102 AVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKL- 160

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
            W Y  SKTLAE AA KFA+EN ID++T+ P+++ GP L P + +S      LI G    
Sbjct: 161 -W-YVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTF 218

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSV--PELAKFLNKR 238
            N          S     V DV  AHI   E  SASGRY  C V   V   E+ K L++ 
Sbjct: 219 PN---------ASYRWVDVRDVANAHIQAFEIPSASGRY--CLVERVVHYSEVVKILHEL 267

Query: 239 FPEYKVPTDFGD-FPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           +P  ++P    D  P      +S EK  S G  F   +E     TVE LK KG L 
Sbjct: 268 YPTLQLPEKCADDKPYVPTYQVSKEKAKSLGIEF-IPLEVSLKDTVESLKEKGFLS 322

Length = 322

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  190 bits (484), Expect = 5e-59
 Identities = 89/261 (34%), Positives = 123/261 (47%), Gaps = 18/261 (6%)

Query: 1   NQKKISPLIAL----QELGELKIFRADL-TDEASFDAPISRSDIVFHVATPVNFSSDDPE 55
           +  K + L AL         L+    D  T   ++D  +   D V HVA+P  F+  D E
Sbjct: 32  SLSKSAKLKALLKAAGYNDRLEFVIVDDLTAPNAWDEALKGVDYVIHVASPFPFTGPDAE 91

Query: 56  TDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLS 115
            D+I PA++G +NVL+A     +VKRV+LTSS AAV        G V  E++W D+    
Sbjct: 92  DDVIDPAVEGTLNVLEAAKAAGSVKRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISK 151

Query: 116 SEKPPTWGYAASKTLAERAACKFAQENN--IDLITVIPSLMSGPSLTPD-IPSSVALAAT 172
           S       Y ASKTLAE+AA +F +EN    +LIT+ P  + GPSL  D + SS  L   
Sbjct: 152 S--NGLDAYIASKTLAEKAAWEFVKENKPKFELITINPGYVLGPSLLADELNSSNELINK 209

Query: 173 LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIF-LAEKESASGRYICCAVNTSVPEL 231
           L+ G   L      +           V DV  AH+  L   E+A  R+I  A   S  E+
Sbjct: 210 LLDGK--LPAIPPNLPF-----GYVDVRDVADAHVRALESPEAAGQRFIVSAGPFSFQEI 262

Query: 232 AKFLNKRFPEYKVPTDFGDFP 252
           A  L + FP+   P    +  
Sbjct: 263 ADLLREEFPQLTAPFPAPNPL 283

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  149 bits (377), Expect = 6e-43
 Identities = 97/249 (38%), Positives = 139/249 (55%), Gaps = 25/249 (10%)

Query: 1   NQKKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFS-SDDPETDM 58
           ++KK   L+AL    E LK+F+ADL DE SF+  I   + VFH A+PV  +   DP+ ++
Sbjct: 41  DRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVEL 100

Query: 59  IKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNV-TGLVMDEKNWTDVEFLSSE 117
           I PA+ G +NVL+ CTK  +VKRVILTSS AAV      +    V+DE  +T+  F  +E
Sbjct: 101 INPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSF--AE 158

Query: 118 KPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGN 177
           +   W Y  SKTLAE AA +FA++N IDLI + P L++GP L P +  SVA+   L+ G 
Sbjct: 159 ERKQW-YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGK 217

Query: 178 DFLLNGLKGMQMLSGSISISH-----VEDVCRAHIFLAEKESASGRYICCAVNTSVPELA 232
           +                + +H     V DV  AH+   E  SA+GRYI      ++ ++ 
Sbjct: 218 N--------------PFNTTHHRFVDVRDVALAHVKALETPSANGRYIIDGPVVTIKDIE 263

Query: 233 KFLNKRFPE 241
             L + FP+
Sbjct: 264 NVLREFFPD 272

Length = 325

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  149 bits (376), Expect = 9e-43
 Identities = 105/295 (35%), Positives = 149/295 (50%), Gaps = 27/295 (9%)

Query: 1   NQKKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
           ++KK   L+AL    E LK+F+ADL +E+SF+  I   D VFH A+PV F+  DP+T++I
Sbjct: 41  DRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELI 100

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNV-TGLVMDEKNWTDVEFLSSEK 118
            PA++G +NVL  C +T +VKRVILTSS AAV      +    V+DE  ++D       K
Sbjct: 101 DPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETK 160

Query: 119 PPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGND 178
              W Y  SK LAE AA +FA++N ID++ + P  + GP L P +  SV L    I G +
Sbjct: 161 --NW-YPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN 217

Query: 179 FLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKR 238
              N                V DV  AHI   E  SA+GRYI      SV ++   L + 
Sbjct: 218 LFNNRF---------YRFVDVRDVALAHIKALETPSANGRYIIDGPIMSVNDIIDILREL 268

Query: 239 FPEYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           FP+  +                 E  ++E  C K  +E + +  VE+   K  L+
Sbjct: 269 FPDLCIADTNE------------ESEMNEMIC-KVCVEKVKNLGVEFTPMKSSLR 310

Length = 322

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  130 bits (327), Expect = 1e-35
 Identities = 97/279 (34%), Positives = 144/279 (51%), Gaps = 19/279 (6%)

Query: 17  LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT 76
           L + +ADL D  +  A I   D VFH A+PV   +DDPE  M++PA+ G   V+ A  + 
Sbjct: 62  LILCKADLQDYEALKAAIDGCDGVFHTASPV---TDDPE-QMVEPAVNGAKFVINAAAEA 117

Query: 77  KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAAC 136
           K VKRV++TSS  AV ++       V+DE  W+D++F  + K   W Y   K +AE+AA 
Sbjct: 118 K-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTK--NW-YCYGKMVAEQAAW 173

Query: 137 KFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISI 196
           + A+E  +DL+ + P L+ GP L P I +S+      +TG+      L        + + 
Sbjct: 174 ETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANL--------TQAY 225

Query: 197 SHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGD--FPSE 254
             V DV  AH+ + E  SASGRY+         E+ + L K FPEY +PT   D   P  
Sbjct: 226 VDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRA 285

Query: 255 AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
                +++K+   G  F    + +YD TV+ L+ KG L 
Sbjct: 286 KPYKFTNQKIKDLGLEFTSTKQSLYD-TVKSLQEKGHLA 323

Length = 342

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  110 bits (276), Expect = 3e-28
 Identities = 65/291 (22%), Positives = 109/291 (37%), Gaps = 29/291 (9%)

Query: 14  LGELKIFRADLTDEASFDAPIS-RSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVL 70
           L  ++    DLTD    D       D V H+A   +   S+     + +   + G +N+L
Sbjct: 41  LSGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLL 100

Query: 71  KACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTL 130
           +A      VKR +  SS + V     +   L +DE +            P   Y  SK  
Sbjct: 101 EAARAAG-VKRFVFASSVSVV---YGDPPPLPIDE-DLGPPR-------PLNPYGVSKLA 148

Query: 131 AERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSV--ALAATLITGNDFLLNGLKGMQ 188
           AE+    +A+   + ++ + P  + GP   PD+ S V  A    L+ G   ++ G  G Q
Sbjct: 149 AEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQ 208

Query: 189 MLSGSISISHVEDVCRAHIFLAEKESASGRYICCA--VNTSVPELAKFLNKRF----PEY 242
                    +V+DV  A +   E     G +   +     +V ELA+ + +      P  
Sbjct: 209 TR----DFVYVDDVADALLLALENPDG-GVFNIGSGTAEITVRELAEAVAEAVGSKAPLI 263

Query: 243 KVPTDFGDFPSEAKLILSSEKLISE-GFCFKYGIEDIYDQTVEYLKTKGML 292
                          +L   K  +  G+  K  +E+    T+E+L  K  L
Sbjct: 264 VYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKLEL 314

Length = 314

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  100 bits (250), Expect = 2e-24
 Identities = 69/245 (28%), Positives = 101/245 (41%), Gaps = 29/245 (11%)

Query: 6   SPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQG 65
           S  + L  L  +++   DLTD AS  A +   D VFH+A   +  + D +  + +  ++G
Sbjct: 33  SDAVLLDGLP-VEVVEGDLTDAASLAAAMKGCDRVFHLAAFTSLWAKDRKE-LYRTNVEG 90

Query: 66  VVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYA 125
             NVL A  +   V+RV+ TSS AA+           +DE       +     P    Y 
Sbjct: 91  TRNVLDAALEAG-VRRVVHTSSIAALGGP----PDGRIDETT----PWNERPFPN--DYY 139

Query: 126 ASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLK 185
            SK LAE    + A    +D++ V PS + GP    D   +    +T +   D+ LNG  
Sbjct: 140 RSKLLAELEVLEAA-AEGLDVVIVNPSAVFGP---GDEGPT----STGLDVLDY-LNGK- 189

Query: 186 GMQM-LSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTS----VPELAKFLNKRFP 240
            +     G  S   V DV   HI   EK     RYI    N S       LA+    + P
Sbjct: 190 -LPAYPPGGTSFVDVRDVAEGHIAAMEKGRRGERYILGGENLSFKQLFETLAEITGVKPP 248

Query: 241 EYKVP 245
              +P
Sbjct: 249 RRTIP 253

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score = 91.7 bits (228), Expect = 1e-21
 Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 29/216 (13%)

Query: 17  LKIFRADLTDEASF-DAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTK 75
           LK+F  D  D  S  DA    S +      P ++ S D +  M+   ++   NVL+AC +
Sbjct: 59  LKVFDVDPLDYHSILDALKGCSGLFCCFDPPSDYPSYDEK--MVDVEVRAAHNVLEACAQ 116

Query: 76  TKTVKRVILTSSAAAVSINAQNV-TGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERA 134
           T T+++V+ TSS  AV     N+ T   +DE++W+D  F    K   W +A +KTL+E+ 
Sbjct: 117 TDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFK--LW-HALAKTLSEKT 173

Query: 135 ACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGM-QML-SG 192
           A   A +  ++++++   L+ GPSLT   P                   LKG  QM  +G
Sbjct: 174 AWALAMDRGVNMVSINAGLLMGPSLTQHNPY------------------LKGAAQMYENG 215

Query: 193 SISISHVEDVCRAHIFLAEKESASGRYICC--AVNT 226
            +    V  +  AHI   E  S+ GRY+C    VNT
Sbjct: 216 VLVTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNT 251

Length = 297

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 80.8 bits (200), Expect = 4e-18
 Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 36/216 (16%)

Query: 15  GELKIFRADLTDEASFDAPI--SRSDIVFHVA--TPVNFSSDDPETDMIKPAIQGVVNVL 70
           G ++    DLTD  + +  +   + D V H+A  + V  S +DP  D I+  + G + +L
Sbjct: 40  GRIRFHEGDLTDPDALERLLAEVQPDAVIHLAAQSGVGASFEDPA-DFIRANVLGTLRLL 98

Query: 71  KACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTL 130
           +A  +   VKR +  SS+        +V    + E   T +  LS        YAA+K  
Sbjct: 99  EAA-RRAGVKRFVFASSSEV----YGDVADPPITED--TPLGPLSP-------YAAAKLA 144

Query: 131 AERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSV--ALAATLITGNDFLLNGLKGMQ 188
           AER    +A+   +  + +    + GP       + V  AL   ++ G   LL G     
Sbjct: 145 AERLVEAYARAYGLRAVILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLG----- 199

Query: 189 MLSGS-----ISISHVEDVCRAHIFLAEKESASGRY 219
              G+     +   +V+DV RA +   E       Y
Sbjct: 200 --DGTQRRDFL---YVDDVARAILLALEHPDGGEIY 230

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 78.1 bits (193), Expect = 2e-17
 Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 31/192 (16%)

Query: 34  ISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV 91
           I R D+V H+A  V    S D+P+ +  +  + G +N+L+A  K   VKR +  SSA+  
Sbjct: 28  IDRLDVVVHLAALVGVPASWDNPD-EDFETNVVGTLNLLEAARKAG-VKRFVYASSASV- 84

Query: 92  SINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIP 151
                +  GL  +E+             P   Y  SK  AE     + +   + ++ +  
Sbjct: 85  ---YGSPEGLPEEEETPP---------RPLSPYGVSKLAAEHLLRSYGESYGLPVVILRL 132

Query: 152 SLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQM-LSGSISIS----HVEDVCRAH 206
           + + GP   P +   V         NDF+   L+G  + + G  + +    HV+DV RA 
Sbjct: 133 ANVYGPGQRPRLDGVV---------NDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAI 183

Query: 207 IFLAEKESASGR 218
           +   E     G 
Sbjct: 184 LHALENPLEGGG 195

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 77.7 bits (192), Expect = 2e-16
 Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 37/250 (14%)

Query: 6   SPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQG 65
           S    L+ L  ++I   DL D AS    ++    +FHVA      + DPE  M    ++G
Sbjct: 35  SDRRNLEGLD-VEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAPDPEE-MYAANVEG 92

Query: 66  VVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYA 125
             N+L+A  +   V+RV+ TSS A + +      G   DE   + ++ +         Y 
Sbjct: 93  TRNLLRAALEAG-VERVVYTSSVATLGVRGD---GTPADETTPSSLDDMIGH------YK 142

Query: 126 ASKTLAERAACKFAQENNIDLITVIPSLMSGP---SLTPDIPSSVALAATLITGNDFLLN 182
            SK LAE+AA + A E  + ++ V PS   GP     TP             TG   +++
Sbjct: 143 RSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTP-------------TG-RIIVD 188

Query: 183 GLKGMQM---LSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPE----LAKFL 235
            L G +M   +   +++ HV+DV   H+   E+     RYI    N ++ +    LA+  
Sbjct: 189 FLNG-KMPAYVDTGLNLVHVDDVAEGHLLALERGRIGERYILGGENLTLKQILDKLAEIT 247

Query: 236 NKRFPEYKVP 245
            +  P  K+P
Sbjct: 248 GRPAPRVKLP 257

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score = 77.5 bits (191), Expect = 3e-16
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 27/207 (13%)

Query: 68  NVLKACTKTKTVKRVILTSS--AAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYA 125
           NV++AC +T++V++ + TSS  A     N  +    V+DE++W+D  F    K   W YA
Sbjct: 161 NVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNK--LW-YA 217

Query: 126 ASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP-SSVALAATLITGNDFLLNGL 184
             K  AE+AA + A+   + L T+ P+L++GP        +++A               L
Sbjct: 218 LGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAY--------------L 263

Query: 185 KGMQ-MLS-GSISISHVEDVCRAHIFLAE---KESASGRYICCAVNTSVPELAKFLNKR- 238
           KG Q ML+ G ++ + VE +  AH+ + E    ++A GRYIC     S  + A+ L ++ 
Sbjct: 264 KGAQEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQI 323

Query: 239 -FPEYKVPTDFGDFPSEAKLILSSEKL 264
             P  K+  +     + A+  LS++KL
Sbjct: 324 GLPINKIAGNSSSDDTPARFELSNKKL 350

Length = 367

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 68.5 bits (168), Expect = 3e-13
 Identities = 65/290 (22%), Positives = 111/290 (38%), Gaps = 39/290 (13%)

Query: 16  ELKIFRADLTDEASFDAPISRSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKAC 73
                  D+ D +  +  + + D+VFH+A  +   +S   P +  ++  + G +NVL+A 
Sbjct: 48  RFHFISGDVRDASEVEYLVKKCDVVFHLAALIAIPYSYTAPLS-YVETNVFGTLNVLEAA 106

Query: 74  TKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAER 133
                 KRV+ TS++  V   AQ+V    +DE +      L     P   Y+ASK  A+R
Sbjct: 107 CV-LYRKRVVHTSTSE-VYGTAQDVP---IDEDH-----PLLYINKPRSPYSASKQGADR 156

Query: 134 AACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITG---NDFLLNGLKGMQML 190
            A  + +   + +  + P    GP       S+ A+  T+I+       L+N   G    
Sbjct: 157 LAYSYGRSFGLPVTIIRPFNTYGPRQ-----SARAVIPTIISQRAIGQRLINLGDGSPTR 211

Query: 191 SGSISISHVEDVCRAHIFLAEKESASGRYI-----------CCAVNTSVPELAKFLNKRF 239
                 + V+D  R  I + +   A G  I             AV   V EL + +    
Sbjct: 212 ----DFNFVKDTARGFIDILDAIEAVGEIINNGSGEEISIGNPAVELIVEELGEMVL--I 265

Query: 240 PEYKVPTDFGDFPSEAKLILSSEKLISE-GFCFKYGIEDIYDQTVEYLKT 288
                      +    + I    K     G+  KY + D   +T+E+ K 
Sbjct: 266 VYDDHREYRPGYSEVERRIPDIRKAKRLLGWEPKYSLRDGLRETIEWFKD 315

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 65.3 bits (160), Expect = 3e-12
 Identities = 66/280 (23%), Positives = 107/280 (38%), Gaps = 34/280 (12%)

Query: 17  LKIFRADLTDEASFDAPISRSDIVFHVAT--PVNFSSDDPETDMIKPAIQGVVNVLKACT 74
           +K    D+ D+   +      D VFH A    V  S +DP  D  +  + G +N+L+A  
Sbjct: 47  VKFIEGDIRDDELVEFAFEGVDYVFHQAAQASVPRSIEDPIKDH-EVNVLGTLNLLEAAR 105

Query: 75  KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERA 134
           K   VKR +  SS++           L  DE +  +         P   YA SK   E  
Sbjct: 106 KAG-VKRFVYASSSSVYGDP----PYLPKDEDHPPN---------PLSPYAVSKYAGELY 151

Query: 135 ACKFAQENNIDLITVIPSLMS--GPSLTPDIPSSVALA---ATLITGNDFLLNGLKGMQM 189
              FA+     L TV     +  GP   P+   +  +       + G    + G  G Q 
Sbjct: 152 CQVFARL--YGLPTVSLRYFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYG-DGEQ- 207

Query: 190 LSGSISISHVEDVCRAHIFLAEKESASGRY-ICCAVNTSVPELAKFLNKRFPEYKVPTDF 248
              +   ++VEDV  A++  A   +    Y I     TSV ELA+ + +     ++   +
Sbjct: 208 ---TRDFTYVEDVVEANLLAATAGAGGEVYNIGTGKRTSVNELAELIREIL-GKELEPVY 263

Query: 249 GDF-PSEAKLILSSEKLISE--GFCFKYGIEDIYDQTVEY 285
               P + +  L+      +  G+  K   E+    TVE+
Sbjct: 264 APPRPGDVRHSLADISKAKKLLGWEPKVSFEEGLRLTVEW 303

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 59.9 bits (146), Expect = 1e-10
 Identities = 43/200 (21%), Positives = 67/200 (33%), Gaps = 33/200 (16%)

Query: 17  LKIFRADLT------DEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVL 70
           +     DL+       +  F       D++ H A  VNF   +P +D+    + G   VL
Sbjct: 60  IIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNF--VEPYSDLRATNVLGTREVL 117

Query: 71  KACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTL 130
           +   + K        S+A         +           + E       P  GY  SK L
Sbjct: 118 RLAKQMKK-LPFHHVSTAYVNGERGGLLEEKPYKLD---EDEPALLGGLPN-GYTQSKWL 172

Query: 131 AE---RAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGM 187
           AE   R A        + ++   PS+++G S T  I            G+DF   GL G 
Sbjct: 173 AEQLVREAAG-----GLPVVIYRPSIITGESRTGWIN-----------GDDFGPRGLLGG 216

Query: 188 QMLSGSISISHVEDVCRAHI 207
             L G +     +   R  +
Sbjct: 217 AGL-GVLPDILGDPDARLDL 235

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 61/299 (20%), Positives = 94/299 (31%), Gaps = 62/299 (20%)

Query: 15  GELKIFRADLTDEASFDAPISRS--DIVFHVATP--VNFSSDDPE----TDMIKPAIQGV 66
             + +   DLTD +S    I +   D ++H+A    V  S DDPE     +       G 
Sbjct: 49  DRITLHYGDLTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVN-----AVGT 103

Query: 67  VNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEK---PPTWG 123
           +N+L+A        R    SS+           G V         E   SE     P   
Sbjct: 104 LNLLEAIRILGLDARFYQASSSE--------EYGKV--------QELPQSETTPFRPRSP 147

Query: 124 YAASKTLAERAACKFAQENNIDLITVIPSLMSGPS-----LTPDIPSSVA-----LAATL 173
           YA SK  A+     + +   +  +        GP      +T  I   VA     L   L
Sbjct: 148 YAVSKLYADWITRNYREAYGLFAVNGRLFNHEGPRRGETFVTRKITRQVARIKAGLQPVL 207

Query: 174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPE--- 230
             GN   L+  +               D   A+  L ++       I      SV E   
Sbjct: 208 KLGN---LDAKRDW---------GDARDYVEAYWLLLQQGEPDDYVIATGETHSVREFVE 255

Query: 231 -LAKFLNKRFPEYKVPTDFGDF-PSEAKLIL-SSEKLISE-GFCFKYGIEDIYDQTVEY 285
              +             D   F P+E  L+L    K   E G+  +   E++  + ++ 
Sbjct: 256 LAFEESGLTGDIEVE-IDPRYFRPTEVDLLLGDPSKAREELGWKPEVSFEELVREMLDA 313

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 58.5 bits (142), Expect = 8e-10
 Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 37/215 (17%)

Query: 12  QELGELKIFRADLTD----EASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVV 67
              G ++    DLTD    E +F+      ++VFH A+P + S+DD      K  +QG  
Sbjct: 41  SSSGRVQFHTGDLTDPQDLEKAFNE--KGPNVVFHTASPDHGSNDD---LYYKVNVQGTR 95

Query: 68  NVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVE-FLSSEKPPTWGYAA 126
           NV++AC K   VK+++ TSSA+ V     N   ++  +++    +    +       Y  
Sbjct: 96  NVIEACRKC-GVKKLVYTSSASVVF----NGQDIINGDESLPYPDKHQDA-------YNE 143

Query: 127 SKTLAERAACKFAQENNIDLITVI--PSLMSGPSLTPDIPSSVALAATLITGNDFLLNGL 184
           +K LAE+   K A +    L+T    P+ + GP     +P  +  A           NG 
Sbjct: 144 TKALAEKLVLK-ANDPESGLLTCALRPAGIFGPGDRQLVPGLLKAAK----------NGK 192

Query: 185 KGMQMLSGS--ISISHVEDVCRAHIFLAEKESASG 217
              Q+  G+     ++VE+V  AHI  A+   +S 
Sbjct: 193 TKFQIGDGNNLFDFTYVENVAHAHILAADALLSSS 227

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 33/228 (14%)

Query: 14  LGELKIFRADLTDEASFDAPISRSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLK 71
             ++++   D+ D  S    +   D+VFH+A  +   +S   P++  +   + G +NVL+
Sbjct: 48  KDKIEVVTGDIRDPDSVRKAMKGCDVVFHLAALIAIPYSYIAPDS-YVDTNVTGTLNVLQ 106

Query: 72  ACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLA 131
           A      V++V+ TS++  V   AQ V    +DEK+      L  + P    Y+ASK  A
Sbjct: 107 AARDLG-VEKVVHTSTSE-VYGTAQYVP---IDEKH-----PLQGQSP----YSASKIGA 152

Query: 132 ERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLS 191
           ++ A  F +  N  +  + P    GP       S+ A+  T+IT    + +G + +++  
Sbjct: 153 DQLALSFYRSFNTPVTIIRPFNTYGPR-----QSARAVIPTIITQ---IASGKRRIKL-- 202

Query: 192 GSIS----ISHVEDVCRAHIFLAEKESASGRYICCAVN--TSVPELAK 233
           GS+S     ++V D  R  I +AE +   G  I    N   S+ +  K
Sbjct: 203 GSLSPTRDFNYVTDTVRGFIAIAESDKTVGEVINIGSNFEISIGDTVK 250

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 49.2 bits (118), Expect = 8e-07
 Identities = 52/218 (23%), Positives = 84/218 (38%), Gaps = 35/218 (16%)

Query: 11  LQELGELKIFRADLT------DEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPA-I 63
             EL  +K+   DL+       +  +       D++ H    VN+     E   +KPA +
Sbjct: 58  ELELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVYPYEE---LKPANV 114

Query: 64  QGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWG 123
            G   +LK     K  K +   S+ +  S  A+    L  +E      + L S+     G
Sbjct: 115 LGTKELLKLAATGKL-KPLHFVSTLSVFS--AEEYNALDDEE----SDDMLESQNGLPNG 167

Query: 124 YAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNG 183
           Y  SK +AE+   + A    + +  + P  + G S T              T +DF    
Sbjct: 168 YIQSKWVAEK-LLREAANRGLPVAIIRPGNIFGDSET----------GIGNT-DDFFWRL 215

Query: 184 LKG-MQM-----LSGSISISHVEDVCRAHIFLAEKESA 215
           LKG +Q+         + +S V+ V RA + LA  ES 
Sbjct: 216 LKGCLQLGIYPISGAPLDLSPVDWVARAIVKLALNESN 253

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 49/205 (23%), Positives = 75/205 (36%), Gaps = 40/205 (19%)

Query: 23  DLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRV 82
           D+TD+      +  SD+V H A  ++         ++K  ++G  NVL AC K   V+ +
Sbjct: 53  DVTDKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAG-VRVL 111

Query: 83  ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWG--YAASKTLAERAACKFAQ 140
           + TSS   V  N+     +  DE         ++    T    Y  SK LAE+   K   
Sbjct: 112 VYTSSMEVVGPNSYGQPIVNGDE---------TTPYESTHQDPYPESKALAEKLVLK--- 159

Query: 141 ENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI--TGNDFLLNGL------KGMQMLSG 192
            N         S +           + AL    I   G+ FL   L         +  +G
Sbjct: 160 ANG--------STLKNGGRL----YTCALRPAGIFGEGDPFLFPFLVRLLKNGLAKFRTG 207

Query: 193 S----ISISHVEDVCRAHIFLAEKE 213
                    +V +V  AHI LA + 
Sbjct: 208 DKNVLSDRVYVGNVAWAHI-LAARA 231

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 47.5 bits (113), Expect = 3e-06
 Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 10/120 (8%)

Query: 16  ELKIFRADLTDEASFDAPISRSDIVFHVATPVN-FSSDDPETDMIKPAIQGVVNVLKACT 74
            +     D+ D +          +V H A  V+ F   + E    +  + G   VL+AC 
Sbjct: 52  YVTDIEGDIKDLSFLFRACQGVSVVIHTAAIVDVFGPPNYEELE-EVNVNGTQAVLEACV 110

Query: 75  KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERA 134
           +   VKR++ TSS      N +        E    D  +  +  PP   YA+SK LAE  
Sbjct: 111 QN-NVKRLVYTSSIEVAGPNFKGRPIFNGVE----DTPYEDTSTPP---YASSKLLAENI 162

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 46.7 bits (111), Expect = 6e-06
 Identities = 43/201 (21%), Positives = 78/201 (38%), Gaps = 29/201 (14%)

Query: 16  ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPA-IQGVVNVLKACT 74
            ++  + D+TD    +  +S +D VFH A  V  +      D+     + G  NVL AC 
Sbjct: 46  NIEFLKGDITDRNDVEQALSGADCVFHTAAIVPLAG---PRDLYWEVNVGGTQNVLDACQ 102

Query: 75  KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERA 134
           +   V++ + TSS ++V    QN+             E L      +  YA +K +AE  
Sbjct: 103 RCG-VQKFVYTSS-SSVIFGGQNIH---------NGDETLPYPPLDSDMYAETKAIAEII 151

Query: 135 ACKFAQENNIDLITVIPSLMSGPS---LTPDIPSSVALAATLITGNDFLLNGLKGMQMLS 191
             +    +++    + P+ + GP    L P +            G    + G       +
Sbjct: 152 VLEANGRDDLLTCALRPAGIFGPGDQGLVPILFEWA------EKGLVKFVFGRG-----N 200

Query: 192 GSISISHVEDVCRAHIFLAEK 212
             +  ++V ++  AHI  A  
Sbjct: 201 NLVDFTYVHNLAHAHILAAAA 221

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 46.2 bits (110), Expect = 9e-06
 Identities = 31/192 (16%), Positives = 61/192 (31%), Gaps = 33/192 (17%)

Query: 38  DIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQN 97
           D + H    VN+     E  +    + G   VL+     +  K +   S+ +  +  A +
Sbjct: 90  DTIVHNGALVNWVYPYSE--LRGANVLGTREVLRLAASGRA-KPLHYVSTISVGA--AID 144

Query: 98  VTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGP 157
           ++ +  D+        ++       GYA SK +AE    + A +  + +  V P  + G 
Sbjct: 145 LSTVTEDD------ATVTPPPGLAGGYAQSKWVAEL-LVREASDRGLPVTIVRPGRILGN 197

Query: 158 SLTPDIPSSVALAATLITGNDFLLNGLKG-MQM---------LSGSISISHVEDVCRAHI 207
           S T             I  +D L   +KG + +               +  V        
Sbjct: 198 SYT-----------GAINSSDILWRMVKGCLALGAYPQSPELTEDLTPVDFVARAIVVLS 246

Query: 208 FLAEKESASGRY 219
                 +    +
Sbjct: 247 SRPAASAGGPVF 258

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 49/206 (23%), Positives = 76/206 (36%), Gaps = 37/206 (17%)

Query: 21  RADLTDEASFDAP-ISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTV 79
           R D+ D A+ D      +D V H+A  ++   D  E   I   + G  NVL AC     V
Sbjct: 46  RLDIRDPAAADVFREREADAVVHLAFILDPPRDGAERHRIN--VDGTQNVLDACAAAG-V 102

Query: 80  KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFA 139
            RV++TSS A    +  N              E       P + Y+  K   E+   +F 
Sbjct: 103 PRVVVTSSVAVYGAHPDN---PAPLT------EDAPLRGSPEFAYSRDKAEVEQLLAEFR 153

Query: 140 QENNIDLITVI--PSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKG----MQMLSGS 193
           + +  +L   +  P+ + GP                ++     L    G     Q L   
Sbjct: 154 RRHP-ELNVTVLRPATILGPGTR-------NTTRDFLSPR--RLPVPGGFDPPFQFL--- 200

Query: 194 ISISHVEDVCRAHIFLAEKESASGRY 219
               H +DV RA + LA +  A+G +
Sbjct: 201 ----HEDDVARA-LVLAVRAGATGIF 221

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 63/274 (22%), Positives = 99/274 (36%), Gaps = 58/274 (21%)

Query: 21  RADLTDEASFDAPI--SRSDIVFHVA--TPVNFSSDDP-ETDMIKPAIQGVVNVLKACTK 75
           R D+ D  +    I     +IVFH+A    V  S  DP ET   +  + G VN+L+A  +
Sbjct: 58  RGDIRDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVET--FETNVMGTVNLLEAIRE 115

Query: 76  TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEF--LSSEKPPTWGYAASKTLAER 133
           T +VK V+  +S        +N       E  W   E   L    P    Y++SK  AE 
Sbjct: 116 TGSVKAVVNVTSDKCY----EN------KEWGWGYRENDPLGGHDP----YSSSKGCAEL 161

Query: 134 AACKFAQENNIDLITVIPSLMSGPSLTPD-IPSSVALAATLITGNDFLLNGL--KGMQML 190
               +             S  +  +     I  + A A  +I G D+  + +    ++  
Sbjct: 162 IISSYRN-----------SFFNPENYGKHGIAIASARAGNVIGGGDWAEDRIVPDCIRAF 210

Query: 191 SGSISI-----------SHVEDVCRAHIFLAEKESASGRYICCAVN--------TSVPEL 231
                +            HV +    ++ LAEK    G     A N         +V EL
Sbjct: 211 EAGERVIIRNPNAIRPWQHVLEPLSGYLLLAEKLYERGEEYAEAWNFGPDDEDAVTVLEL 270

Query: 232 AKFLNKRFPEYKVPTDFGDF-PSEAKLI-LSSEK 263
            + + + + E       G+  P EA L+ L   K
Sbjct: 271 VEAMARYWGEDARWDLDGNSHPHEANLLKLDCSK 304

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 42.8 bits (101), Expect = 9e-05
 Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 15/138 (10%)

Query: 22  ADLTDEASFDAPI-SRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVK 80
            DL   A  +A    R D+VFH+A  V+  ++       +  + G  N+L+A  K     
Sbjct: 51  GDLAVPALIEALANGRPDVVFHLAAIVSGGAEADFDLGYRVNVDGTRNLLEALRKNGPKP 110

Query: 81  RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ 140
           R + TSS A   +    +   V D               P   Y A K + E     +++
Sbjct: 111 RFVFTSSLA---VYGLPLPNPVTDHTALD----------PASSYGAQKAMCELLLNDYSR 157

Query: 141 ENNIDLITVI-PSLMSGP 157
              +D  T+  P++   P
Sbjct: 158 RGFVDGRTLRLPTVCVRP 175

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 53/280 (18%), Positives = 99/280 (35%), Gaps = 38/280 (13%)

Query: 12  QELGELKIFRADLTDEASFDAPISRSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNV 69
             LG +   + D  + A  ++ +   D V H+A+  N   S+ +P  D I+  +   V +
Sbjct: 38  LPLGGVDYIKGDYENRADLESALVGIDTVIHLASTTNPATSNKNPILD-IQTNVAPTVQL 96

Query: 70  LKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKT 129
           L+AC      K +  +S      +  Q    L + E + T          P   Y  SK 
Sbjct: 97  LEACAAAGIGKIIFASSGGTVYGVPEQ----LPISESDPTL---------PISSYGISKL 143

Query: 130 LAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQM 189
             E+    +     +D   +  S   GP   PD      +          L   L+G  +
Sbjct: 144 AIEKYLRLYQYLYGLDYTVLRISNPYGPGQRPD--GKQGVIPI------ALNKILRGEPI 195

Query: 190 -LSGSISIS----HVEDVCRAHIFLAEKESASGRY-ICCAVNTSVPELAKFLNKRFPEYK 243
            + G         +++D+  A + L   +     + I   +  S+ EL   + K      
Sbjct: 196 EIWGDGESIRDYIYIDDLVEALMALLRSKGLEEVFNIGSGIGYSLAELIAEIEK-VTGRS 254

Query: 244 VPTDFGDFPSE--AKLILSSEKLISE-GF----CFKYGIE 276
           V   +    +    K++L   +  +E G+      + G+E
Sbjct: 255 VQVIYTPARTTDVPKIVLDISRARAELGWSPKISLEDGLE 294

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 6/67 (8%)

Query: 22  ADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKR 81
            DL D  S    +   D+V H+A     + D  E D     ++G  NVL+A  K   VK 
Sbjct: 48  GDLRDLDSLSDAVQGVDVVIHLAGAPRDTRDFCEVD-----VEGTRNVLEAA-KEAGVKH 101

Query: 82  VILTSSA 88
            I  SS 
Sbjct: 102 FIFISSL 108

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 16/153 (10%)

Query: 21  RADLTDEASFDAPISRSDIVFHVATPVNF---SSDDPETDMIKPAIQGVVNVLKACTKTK 77
            A+L D  SF       D V H+A  V+       DP +D  K   +    + +A    +
Sbjct: 42  LAELPDIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARA-AARQ 100

Query: 78  TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACK 137
            VKR +  SS   V +N +   G   DE         +    P   Y  SK  AERA  +
Sbjct: 101 GVKRFVFLSS---VKVNGEGTVGAPFDE---------TDPPAPQDAYGRSKLEAERALLE 148

Query: 138 FAQENNIDLITVIPSLMSGPSLTPDIPSSVALA 170
               + ++++ + P ++ GP +  +    + L 
Sbjct: 149 LGASDGMEVVILRPPMVYGPGVRGNFARLMRLI 181

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 24/94 (25%)

Query: 198 HVEDVCRAHIFLAEKESASGRYICCAVNTSVP------ELAKFLNKR--FPEYKVPT--- 246
           H++D+ R   F  E    SG     A N  V        L + L++    P   VP    
Sbjct: 198 HIDDLVRLIEFAIENPDLSGPVNAVAPN-PVTNAEFTKALGRALHRPAGLP---VPAFAL 253

Query: 247 --DFGDFPSEAKLILSS-----EKLISEGFCFKY 273
              FG+  +E  L+L       E+L+  GF F+Y
Sbjct: 254 KLGFGEMRAE--LLLKGQRVLPERLLDAGFQFRY 285

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 39.9 bits (94), Expect = 8e-04
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 27/95 (28%)

Query: 198 HVEDVCRAHIFLAEKESASGRYICCAVNTSVPE----------LAKFLNKR----FPEYK 243
           H+ED+ +  +F  E  S SG      VN + PE          LA+ L++      P + 
Sbjct: 198 HIEDLVQLILFALENASVSG-----PVNATAPEPVRNKEFAKALARALHRPAFFPVPAFV 252

Query: 244 VPTDFGDFPSEAKLILSS-----EKLISEGFCFKY 273
           +    G     A L+L       EKL+  GF F+Y
Sbjct: 253 LRALLG---EMAALLLKGQRVLPEKLLEAGFQFQY 284

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 28/118 (23%)

Query: 17  LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT 76
           +   + DL D A     ++  D V        F +   ++D       GV ++L A  + 
Sbjct: 40  VTPVQKDLFDLADLAEALAGVDAVV-----DAFGARPDDSD-------GVKHLLDAAARA 87

Query: 77  KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERA 134
             V+R+++ S+A           GL  DE       F   + P    YA +K  AE  
Sbjct: 88  G-VRRIVVVSAA-----------GLYRDEPGT----FRLDDAPLFPPYARAKAAAEEL 129

Length = 182

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 25/98 (25%)

Query: 198 HVEDVCRAHIFLAEKESASGRYICCAVNTSVPE--------LAKFLNK----RFPEYKVP 245
           H+ED+  A +FL E E  SG +   A N   P         L + L++      P + + 
Sbjct: 197 HIEDLVNAILFLLENEQLSGPFNLTAPN---PVRNKEFAHALGRALHRPAILPVPSFALR 253

Query: 246 TDFGDFPSEAKLILSS-----EKLISEGFCFKYGIEDI 278
              G+    A L+L       +KL + GF F+Y   D+
Sbjct: 254 LLLGEM---ADLLLGGQRVLPKKLEAAGFQFQY--PDL 286

Length = 297

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 14/107 (13%)

Query: 2   QKKISPLIALQELG-ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSDD 53
           + K   L AL+ LG  +    AD+TD A+    +          D V H A  +  +   
Sbjct: 246 EWKAQTLAALEALGARVLYISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLA 305

Query: 54  PET-----DMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINA 95
            +T      ++ P + G++N+ +A    + +   +L SS +A    A
Sbjct: 306 QKTAEDFEAVLAPKVDGLLNLAQA-LADEPLDFFVLFSSVSAFFGGA 351

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 37.1 bits (87), Expect = 0.003
 Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 20/98 (20%)

Query: 10  ALQELG-ELKIFRADLTDEASFDA----------PISRSDIVFH---VATPVNFSSDDPE 55
            L+ LG E+ +   D+ D  +  A          P+   D V H   V          PE
Sbjct: 46  ELEALGAEVTVAACDVADRDALAALLAALPAALGPL---DGVVHNAGVLDDGPLEELTPE 102

Query: 56  --TDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV 91
               ++ P + G  N+ +       +   +L SS A V
Sbjct: 103 RFERVLAPKVTGAWNLHELTRDLD-LGAFVLFSSVAGV 139

This family contains a wide variety of dehydrogenases. Length = 167

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	293
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.98
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.98
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.98
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.97
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.97
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.97
PLN02686	367	cinnamoyl-CoA reductase	99.97
PLN02583	297	cinnamoyl-CoA reductase	99.97
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.97
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.96
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.96
PLN00016	378	RNA-binding protein; Provisional	99.95
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.95
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.95
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.95
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.95
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.93
PRK05865	854	hypothetical protein; Provisional	99.93
PLN02996	491	fatty acyl-CoA reductase	99.93
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.92
PRK07201	657	short chain dehydrogenase; Provisional	99.91
CHL00194	317	ycf39 Ycf39; Provisional	99.9
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.9
PLN02778	298	3,5-epimerase/4-reductase	99.89
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.89
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.88
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.85
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.84
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.83
PLN02260	668	probable rhamnose biosynthetic enzyme	99.82
PLN02503	605	fatty acyl-CoA reductase 2	99.82
KOG2774	366	consensus NAD dependent epimerase [General functio	99.81
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.8
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.79
PRK12320	699	hypothetical protein; Provisional	99.76
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.74
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.71
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.68
PRK06482	276	short chain dehydrogenase; Provisional	99.65
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.61
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.59
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.56
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.53
PRK08263	275	short chain dehydrogenase; Provisional	99.53
PLN03209	576	translocon at the inner envelope of chloroplast su	99.51
PRK07775	274	short chain dehydrogenase; Provisional	99.5
PRK07074	257	short chain dehydrogenase; Provisional	99.49
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.49
PRK06180	277	short chain dehydrogenase; Provisional	99.48
PRK07806	248	short chain dehydrogenase; Provisional	99.47
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.47
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.47
PRK09135	249	pteridine reductase; Provisional	99.45
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.45
PRK06914	280	short chain dehydrogenase; Provisional	99.43
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.43
PRK05875	276	short chain dehydrogenase; Provisional	99.42
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.41
PRK06182	273	short chain dehydrogenase; Validated	99.39
PRK07067	257	sorbitol dehydrogenase; Provisional	99.38
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.38
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.37
PRK12829	264	short chain dehydrogenase; Provisional	99.37
PRK12746	254	short chain dehydrogenase; Provisional	99.36
PRK06138	252	short chain dehydrogenase; Provisional	99.35
PRK06123	248	short chain dehydrogenase; Provisional	99.35
PRK05876	275	short chain dehydrogenase; Provisional	99.34
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.33
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.33
PRK06194	287	hypothetical protein; Provisional	99.32
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.31
PRK07060	245	short chain dehydrogenase; Provisional	99.31
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.31
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.31
PRK12827	249	short chain dehydrogenase; Provisional	99.3
PRK08219	227	short chain dehydrogenase; Provisional	99.3
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.3
PRK07774	250	short chain dehydrogenase; Provisional	99.3
PRK06179	270	short chain dehydrogenase; Provisional	99.3
PRK06128	300	oxidoreductase; Provisional	99.3
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.29
PRK12828	239	short chain dehydrogenase; Provisional	99.29
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.28
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.27
PRK08628	258	short chain dehydrogenase; Provisional	99.27
PRK07041	230	short chain dehydrogenase; Provisional	99.26
PRK09186	256	flagellin modification protein A; Provisional	99.26
PLN02253	280	xanthoxin dehydrogenase	99.25
PRK06181	263	short chain dehydrogenase; Provisional	99.25
PRK06500	249	short chain dehydrogenase; Provisional	99.22
PRK08324	681	short chain dehydrogenase; Validated	99.22
PRK07890	258	short chain dehydrogenase; Provisional	99.21
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.21
PRK06701	290	short chain dehydrogenase; Provisional	99.21
PRK09134	258	short chain dehydrogenase; Provisional	99.21
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.21
PRK05993	277	short chain dehydrogenase; Provisional	99.21
PRK12939	250	short chain dehydrogenase; Provisional	99.2
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.19
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.19
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.19
PRK07024	257	short chain dehydrogenase; Provisional	99.19
PRK10538	248	malonic semialdehyde reductase; Provisional	99.19
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.19
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.19
PRK08264	238	short chain dehydrogenase; Validated	99.17
PRK05717	255	oxidoreductase; Validated	99.17
PRK07985	294	oxidoreductase; Provisional	99.16
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.15
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.15
PRK05650	270	short chain dehydrogenase; Provisional	99.14
PRK07577	234	short chain dehydrogenase; Provisional	99.14
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.13
PRK06841	255	short chain dehydrogenase; Provisional	99.13
PRK08267	260	short chain dehydrogenase; Provisional	99.12
PRK08017	256	oxidoreductase; Provisional	99.12
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.12
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.12
PRK12937	245	short chain dehydrogenase; Provisional	99.11
PRK07825	273	short chain dehydrogenase; Provisional	99.09
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.09
PRK07454	241	short chain dehydrogenase; Provisional	99.09
PRK09291	257	short chain dehydrogenase; Provisional	99.08
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.08
PRK06523	260	short chain dehydrogenase; Provisional	99.08
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.08
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.08
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.07
PRK08265	261	short chain dehydrogenase; Provisional	99.07
PRK12743	256	oxidoreductase; Provisional	99.07
PRK08251	248	short chain dehydrogenase; Provisional	99.07
PRK07814	263	short chain dehydrogenase; Provisional	99.06
PRK06198	260	short chain dehydrogenase; Provisional	99.06
PRK09242	257	tropinone reductase; Provisional	99.06
PRK07069	251	short chain dehydrogenase; Validated	99.06
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.05
PRK06196	315	oxidoreductase; Provisional	99.05
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.04
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.04
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.04
PRK12747	252	short chain dehydrogenase; Provisional	99.03
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.02
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.02
PRK07035	252	short chain dehydrogenase; Provisional	99.02
PRK05693	274	short chain dehydrogenase; Provisional	99.01
PRK06057	255	short chain dehydrogenase; Provisional	99.01
PRK06398	258	aldose dehydrogenase; Validated	99.01
PRK06101	240	short chain dehydrogenase; Provisional	99.01
PRK12744	257	short chain dehydrogenase; Provisional	99.01
PRK07856	252	short chain dehydrogenase; Provisional	99.0
PRK07904	253	short chain dehydrogenase; Provisional	99.0
PRK06484	520	short chain dehydrogenase; Validated	99.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	98.99
PRK06114	254	short chain dehydrogenase; Provisional	98.99
PRK08277	278	D-mannonate oxidoreductase; Provisional	98.98
PRK07102	243	short chain dehydrogenase; Provisional	98.98
PRK06197	306	short chain dehydrogenase; Provisional	98.98
PRK06949	258	short chain dehydrogenase; Provisional	98.98
PRK07326	237	short chain dehydrogenase; Provisional	98.98
TIGR02415	254	23BDH acetoin reductases. One member of this famil	98.97
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	98.96
PRK08643	256	acetoin reductase; Validated	98.95
PRK07109	334	short chain dehydrogenase; Provisional	98.95
PRK07063	260	short chain dehydrogenase; Provisional	98.95
PRK08589	272	short chain dehydrogenase; Validated	98.94
PRK12742	237	oxidoreductase; Provisional	98.94
PRK07677	252	short chain dehydrogenase; Provisional	98.94
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	98.94
PRK06172	253	short chain dehydrogenase; Provisional	98.93
PRK06139	330	short chain dehydrogenase; Provisional	98.93
PRK07478	254	short chain dehydrogenase; Provisional	98.92
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.92
PRK08226	263	short chain dehydrogenase; Provisional	98.91
PRK08936	261	glucose-1-dehydrogenase; Provisional	98.9
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	98.9
PRK05872	296	short chain dehydrogenase; Provisional	98.89
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	98.89
PRK05867	253	short chain dehydrogenase; Provisional	98.89
PRK07576	264	short chain dehydrogenase; Provisional	98.89
PRK07832	272	short chain dehydrogenase; Provisional	98.86
PRK07578	199	short chain dehydrogenase; Provisional	98.86
PRK07831	262	short chain dehydrogenase; Provisional	98.86
COG2910	211	Putative NADH-flavin reductase [General function p	98.86
PRK05866	293	short chain dehydrogenase; Provisional	98.85
PRK06940	275	short chain dehydrogenase; Provisional	98.85
PRK08278	273	short chain dehydrogenase; Provisional	98.84
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.84
COG0300	265	DltE Short-chain dehydrogenases of various substra	98.82
PRK05854	313	short chain dehydrogenase; Provisional	98.82
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.82
PRK06953	222	short chain dehydrogenase; Provisional	98.81
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	98.81
PRK09072	263	short chain dehydrogenase; Provisional	98.8
PRK05855	582	short chain dehydrogenase; Validated	98.8
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	98.8
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	98.79
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.79
PRK07023	243	short chain dehydrogenase; Provisional	98.78
PRK06483	236	dihydromonapterin reductase; Provisional	98.77
PRK06924	251	short chain dehydrogenase; Provisional	98.76
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	98.74
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	98.73
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.72
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.71
PRK08177	225	short chain dehydrogenase; Provisional	98.7
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	98.7
PRK07201	657	short chain dehydrogenase; Provisional	98.7
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	98.7
PRK08703	239	short chain dehydrogenase; Provisional	98.67
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.66
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	98.66
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	98.65
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	98.65
PRK08339	263	short chain dehydrogenase; Provisional	98.64
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	98.64
PRK06484	520	short chain dehydrogenase; Validated	98.63
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	98.63
PRK09009	235	C factor cell-cell signaling protein; Provisional	98.62
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.61
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	98.6
PRK05599	246	hypothetical protein; Provisional	98.59
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.59
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	98.58
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	98.56
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	98.55
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	98.55
PRK07062	265	short chain dehydrogenase; Provisional	98.55
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.55
PRK08340	259	glucose-1-dehydrogenase; Provisional	98.54
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	98.52
PLN00015	308	protochlorophyllide reductase	98.51
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	98.51
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.5
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.49
PRK05884	223	short chain dehydrogenase; Provisional	98.48
PRK06125	259	short chain dehydrogenase; Provisional	98.48
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	98.45
PRK07791	286	short chain dehydrogenase; Provisional	98.45
PLN02780	320	ketoreductase/ oxidoreductase	98.41
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.35
PRK12367	245	short chain dehydrogenase; Provisional	98.3
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	98.29
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	98.29
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.24
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.23
PRK08303	305	short chain dehydrogenase; Provisional	98.2
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	98.18
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	98.17
PRK08862	227	short chain dehydrogenase; Provisional	98.15
PTZ00325	321	malate dehydrogenase; Provisional	98.13
KOG0725	270	consensus Reductases with broad range of substrate	98.06
KOG1208	314	consensus Dehydrogenases with different specificit	98.03
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	97.92
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.9
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	97.88
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.87
PLN00106	323	malate dehydrogenase	97.82
COG1028	251	FabG Dehydrogenases with different specificities (	97.59
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	97.37
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	97.35
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.2
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	97.08
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.95
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	96.72
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	96.41
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	95.55
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	95.36
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.27
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	94.9
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	94.89
PRK05086	312	malate dehydrogenase; Provisional	94.33
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	94.29
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	94.23
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	92.61
KOG2733	423	consensus Uncharacterized membrane protein [Functi	90.9
PRK08309	177	short chain dehydrogenase; Provisional	90.64
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	88.94
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	87.59
PRK06720	169	hypothetical protein; Provisional	87.18
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	84.96
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	83.35
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	81.92
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	80.93
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	80.42
PF08338	48	DUF1731: Domain of unknown function (DUF1731); Int	80.09

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.1e-42  Score=269.81  Aligned_cols=265  Identities=19%  Similarity=0.197  Sum_probs=223.9

Q ss_pred             chhcccCCCCeEEEecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEE
Q 035985            7 PLIALQELGELKIFRADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRV   82 (293)
Q Consensus         7 ~l~~~~~~~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   82 (293)
                      .|..+.+.++..++++|+.|.+.+.++++  ++|+|+|+|+..+  .+..+|. .+.++|+.||.+||+++++....-||
T Consensus        43 ~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~-~Fi~TNv~GT~~LLEaar~~~~~frf  121 (340)
T COG1088          43 NLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPA-PFIQTNVVGTYTLLEAARKYWGKFRF  121 (340)
T ss_pred             HHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEEechhccccccccChh-hhhhcchHHHHHHHHHHHHhcccceE
Confidence            44455555799999999999999999998  6999999999875  4556777 99999999999999999999733499


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD  162 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~  162 (293)
                      +++||-. +||.-... ...++|++         +.+|.++|+.||+.+..+++.+.+.+|++++|.|+++-|||.+.+.
T Consensus       122 ~HISTDE-VYG~l~~~-~~~FtE~t---------p~~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE  190 (340)
T COG1088         122 HHISTDE-VYGDLGLD-DDAFTETT---------PYNPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE  190 (340)
T ss_pred             EEecccc-ccccccCC-CCCcccCC---------CCCCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch
Confidence            9999997 66655432 14688998         8899999999999999999999999999999999999999998775


Q ss_pred             CCccHHH-HHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCC
Q 035985          163 IPSSVAL-AATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFP  240 (293)
Q Consensus       163 ~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~  240 (293)
                        .+++. +.+++.|.+.++.+.+     ...|||+||+|-|+++..++.+...+.+||+ ++...+..|+++.|++.++
T Consensus       191 --KlIP~~I~nal~g~~lpvYGdG-----~~iRDWl~VeDh~~ai~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~  263 (340)
T COG1088         191 --KLIPLMIINALLGKPLPVYGDG-----LQIRDWLYVEDHCRAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLG  263 (340)
T ss_pred             --hhhHHHHHHHHcCCCCceecCC-----cceeeeEEeHhHHHHHHHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhC
Confidence              35544 4688889998888755     4479999999999999999999999889977 5678999999999999999


Q ss_pred             CCCCC----CCCC-CCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcC
Q 035985          241 EYKVP----TDFG-DFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       241 ~~~~~----~~~~-~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      +....    ..+. +.+.. .+..+|.+|+++ |||.|+++++++++++++||.++.
T Consensus       264 ~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~  320 (340)
T COG1088         264 KDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNE  320 (340)
T ss_pred             ccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhch
Confidence            65432    3333 44444 777899999886 999999999999999999999874

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.3e-42  Score=272.27  Aligned_cols=256  Identities=22%  Similarity=0.259  Sum_probs=216.3

Q ss_pred             eEEEecCCCCCcchhhhhc--CCCEEEEecccC--CCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           17 LKIFRADLTDEASFDAPIS--RSDIVFHVATPV--NFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        17 v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      +++++||+.|.+.+.++|+  ++|+|||+||..  ..+..+|. ++++.|+.||.+|++++++.+ +++|||.||+. +|
T Consensus        46 ~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl-~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAa-vY  122 (329)
T COG1087          46 FKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPL-KYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAA-VY  122 (329)
T ss_pred             CceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHH-HHHhhchHhHHHHHHHHHHhC-CCEEEEecchh-hc
Confidence            6899999999999999997  699999999976  46778899 999999999999999999999 99999988875 88


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCC------C-CCc
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTP------D-IPS  165 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~------~-~~~  165 (293)
                      |.+..   .|++|+.         +..|.++||+||++.|++++.+...++++++++|.+|+.|.....      . ...
T Consensus       123 G~p~~---~PI~E~~---------~~~p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~th  190 (329)
T COG1087         123 GEPTT---SPISETS---------PLAPINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATL  190 (329)
T ss_pred             CCCCC---cccCCCC---------CCCCCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcch
Confidence            87754   6999998         778999999999999999999999999999999999999975442      1 134


Q ss_pred             cHHHHHHHHhCCcccccccc-cccccCC--CCcceeHHhHHHHHHHhhccCCCC---CcEEE-eccCCCHHHHHHHHHHh
Q 035985          166 SVALAATLITGNDFLLNGLK-GMQMLSG--SISISHVEDVCRAHIFLAEKESAS---GRYIC-CAVNTSVPELAKFLNKR  238 (293)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~-g~~~~~~--~~~~v~v~D~a~~~~~~~~~~~~~---~~y~~-~~~~~t~~e~~~~i~~~  238 (293)
                      +++.++....|++..+...+ ..+.+||  .||||||.|+|++.+++++.-..+   .+||+ +|..+|+.|+++++.++
T Consensus       191 Lip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~v  270 (329)
T COG1087         191 LIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKV  270 (329)
T ss_pred             HHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHH
Confidence            56667777777766444333 2333444  599999999999999998753322   37876 78999999999999999


Q ss_pred             CCCCCCCCCCCCCCcc--cccccchHHHHh-cCCcccc-CHHHHHHHHHHHHHH
Q 035985          239 FPEYKVPTDFGDFPSE--AKLILSSEKLIS-EGFCFKY-GIEDIYDQTVEYLKT  288 (293)
Q Consensus       239 ~~~~~~~~~~~~~~~~--~~~~~d~~k~~~-lG~~~~~-~~~~~i~~~i~~~~~  288 (293)
                      .| .++|..+.+...+  ..++.|++|+++ |||+|++ ++++.++...+|...
T Consensus       271 tg-~~ip~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~~  323 (329)
T COG1087         271 TG-RDIPVEIAPRRAGDPAILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQQ  323 (329)
T ss_pred             hC-CcCceeeCCCCCCCCceeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhhh
Confidence            99 5788887776555  788999999998 9999999 999999999999983

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=3.1e-40  Score=280.05  Aligned_cols=279  Identities=83%  Similarity=1.267  Sum_probs=210.5

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++++++.+|++|++.+.++++++|+|||+|+.......++...+++.|+.++.++++++++.+.+++||++||.++++..
T Consensus        59 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~  138 (338)
T PLN00198         59 GDLKIFGADLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSIN  138 (338)
T ss_pred             CceEEEEcCCCChHHHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeecc
Confidence            36889999999999999999999999999997543323333246789999999999999886438999999998755433


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      .....+.+++|+.|........+..|.++|+.+|..+|.+++.++++++++++++||++||||+.....+..+..+...+
T Consensus       139 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~  218 (338)
T PLN00198        139 KLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLI  218 (338)
T ss_pred             CCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHH
Confidence            21111145677655432221113457788999999999999999988899999999999999987554434443334445


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCCCCCcc
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPSE  254 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~  254 (293)
                      .+....+.+..|.+..++.++|+|++|++++++++++.+..++.|++++..+|++|+++.+.+.++...++..+...+..
T Consensus       219 ~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~  298 (338)
T PLN00198        219 TGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTDFGDFPSK  298 (338)
T ss_pred             cCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCCCCCCCccccccCCC
Confidence            55554444323444334458999999999999999987655668888888899999999999998755555444333323


Q ss_pred             cccccchHHHHhcCCccccCHHHHHHHHHHHHHHcCCCC
Q 035985          255 AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK  293 (293)
Q Consensus       255 ~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~~~~  293 (293)
                      .....|++|++++||+|+++++++|+++++|++++++++
T Consensus       299 ~~~~~~~~k~~~~G~~p~~~l~~gi~~~~~~~~~~~~~~  337 (338)
T PLN00198        299 AKLIISSEKLISEGFSFEYGIEEIYDQTVEYFKAKGLLK  337 (338)
T ss_pred             CccccChHHHHhCCceecCcHHHHHHHHHHHHHHcCCCC
Confidence            456789999998999999999999999999999999874

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=2.6e-40  Score=266.49  Aligned_cols=279  Identities=44%  Similarity=0.675  Sum_probs=233.0

Q ss_pred             ccccchhcccCC-CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccE
Q 035985            3 KKISPLIALQEL-GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKR   81 (293)
Q Consensus         3 ~~~~~l~~~~~~-~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   81 (293)
                      .+.+.|+++.+. +++.++.+||+|++++.+++++||+|||+|.+......++..+..+..+.|+.|++++|++.++|+|
T Consensus        44 k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkr  123 (327)
T KOG1502|consen   44 KKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKR  123 (327)
T ss_pred             hhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcce
Confidence            344457766544 5699999999999999999999999999999987655555447899999999999999999988999


Q ss_pred             EEEecccchhccc-ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCC
Q 035985           82 VILTSSAAAVSIN-AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLT  160 (293)
Q Consensus        82 ~v~~SS~~~~~~~-~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~  160 (293)
                      |||+||..++..+ +....+..++|+.|.+.++.   ..-.+.|..+|..+|+..++++++.+++.+++-|+.|+||...
T Consensus       124 vV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~---~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~  200 (327)
T KOG1502|consen  124 VVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFC---RCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQ  200 (327)
T ss_pred             EEEeccHHHhccCCcCCCCCcccccccCCcHHHH---HhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcc
Confidence            9999999988765 33333478999999988763   2333789999999999999999999999999999999999988


Q ss_pred             CCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCC
Q 035985          161 PDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP  240 (293)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~  240 (293)
                      +........+++.+.|........        ...||||+|+|.+.+.+++.+..+|+|++.++..++.|+++.+.+.+|
T Consensus       201 ~~l~~s~~~~l~~i~G~~~~~~n~--------~~~~VdVrDVA~AHv~a~E~~~a~GRyic~~~~~~~~ei~~~l~~~~P  272 (327)
T KOG1502|consen  201 PSLNSSLNALLKLIKGLAETYPNF--------WLAFVDVRDVALAHVLALEKPSAKGRYICVGEVVSIKEIADILRELFP  272 (327)
T ss_pred             cccchhHHHHHHHHhcccccCCCC--------ceeeEeHHHHHHHHHHHHcCcccCceEEEecCcccHHHHHHHHHHhCC
Confidence            755555666778777765544432        355999999999999999999999999999988889999999999999


Q ss_pred             CCCCCCCCCCCCcc--cccccchHHHHhcC-CccccCHHHHHHHHHHHHHHcCCCC
Q 035985          241 EYKVPTDFGDFPSE--AKLILSSEKLISEG-FCFKYGIEDIYDQTVEYLKTKGMLK  293 (293)
Q Consensus       241 ~~~~~~~~~~~~~~--~~~~~d~~k~~~lG-~~~~~~~~~~i~~~i~~~~~~~~~~  293 (293)
                      .+.+|....+....  ....++++|++.|| |+.. +++|++.++++.+++.|+++
T Consensus       273 ~~~ip~~~~~~~~~~~~~~~~~~~k~k~lg~~~~~-~l~e~~~dt~~sl~~~~~l~  327 (327)
T KOG1502|consen  273 DYPIPKKNAEEHEGFLTSFKVSSEKLKSLGGFKFR-PLEETLSDTVESLREKGLLL  327 (327)
T ss_pred             CCCCCCCCCccccccccccccccHHHHhcccceec-ChHHHHHHHHHHHHHhcCCC
Confidence            88877665554222  44468999999987 6665 99999999999999999874

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.5e-39  Score=275.43  Aligned_cols=262  Identities=35%  Similarity=0.527  Sum_probs=206.5

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++++++.+|++|++.+.++++++|+|||+|+...   .++. ..++.|+.++.+++++|++.+ +++||++||..++|+.
T Consensus        60 ~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~---~~~~-~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~  134 (342)
T PLN02214         60 ERLILCKADLQDYEALKAAIDGCDGVFHTASPVT---DDPE-QMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMD  134 (342)
T ss_pred             CcEEEEecCcCChHHHHHHHhcCCEEEEecCCCC---CCHH-HHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeecc
Confidence            3588999999999999999999999999999753   2455 789999999999999999988 8999999997657764


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      .....+.+++|++|.+...   +..|.+.|+.+|..+|++++.++++++++++++||++||||+..+.....+..+...+
T Consensus       135 ~~~~~~~~~~E~~~~~~~~---~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~  211 (342)
T PLN02214        135 PNRDPEAVVDESCWSDLDF---CKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYL  211 (342)
T ss_pred             CCCCCCcccCcccCCChhh---ccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHH
Confidence            3221113578887654332   3456789999999999999999888899999999999999987654333333444545


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCCCC-Cc
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDF-PS  253 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~-~~  253 (293)
                      .+..... +       +..++|||++|+|++++++++++..+++||+++...+++|+++.+++.+|...++...... +.
T Consensus       212 ~g~~~~~-~-------~~~~~~i~V~Dva~a~~~al~~~~~~g~yn~~~~~~~~~el~~~i~~~~~~~~~~~~~~~~~~~  283 (342)
T PLN02214        212 TGSAKTY-A-------NLTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNP  283 (342)
T ss_pred             cCCcccC-C-------CCCcCeeEHHHHHHHHHHHHhCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccCC
Confidence            5543321 1       3368999999999999999998766779988767899999999999999865555443221 11


Q ss_pred             c-cccccchHHHHhcCCccccCHHHHHHHHHHHHHHcCCCC
Q 035985          254 E-AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK  293 (293)
Q Consensus       254 ~-~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~~~~  293 (293)
                      . ....+|++|+++|||+|. +++|+|+++++|+++.|+++
T Consensus       284 ~~~~~~~d~~k~~~LG~~p~-~lee~i~~~~~~~~~~~~~~  323 (342)
T PLN02214        284 RAKPYKFTNQKIKDLGLEFT-STKQSLYDTVKSLQEKGHLA  323 (342)
T ss_pred             CCCccccCcHHHHHcCCccc-CHHHHHHHHHHHHHHcCCCC
Confidence            2 455689999988999995 99999999999999999875

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=1.3e-38  Score=271.41  Aligned_cols=269  Identities=42%  Similarity=0.781  Sum_probs=201.8

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccc
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINA   95 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~   95 (293)
                      +++++.+|++|++.+.++++++|+|||+|+.......++....++.|+.++.+++++|++.+.+++|||+||.+++++..
T Consensus        57 ~~~~v~~Dl~d~~~~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~  136 (351)
T PLN02650         57 RLTLWKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEE  136 (351)
T ss_pred             ceEEEEecCCChhhHHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCC
Confidence            58899999999999999999999999999876433223322678999999999999999876578999999987565432


Q ss_pred             cCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHHh
Q 035985           96 QNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLIT  175 (293)
Q Consensus        96 ~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~  175 (293)
                      ...  ..++|+.|........+..|.++|+.+|..+|.+++.++++++++++++||+++|||+........+...+....
T Consensus       137 ~~~--~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~  214 (351)
T PLN02650        137 HQK--PVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLIT  214 (351)
T ss_pred             CCC--CccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhc
Confidence            211  235677654333222233455789999999999999999888999999999999999875433222211122223


Q ss_pred             CCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCCCCCcc-
Q 035985          176 GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPSE-  254 (293)
Q Consensus       176 ~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~-  254 (293)
                      +....+..       .+.++|+|++|+|++++.+++++..++.|++++..+|++|+++.+.+.++...++..+...+.. 
T Consensus       215 ~~~~~~~~-------~~~r~~v~V~Dva~a~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~  287 (351)
T PLN02650        215 GNEAHYSI-------IKQGQFVHLDDLCNAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPGIDEDL  287 (351)
T ss_pred             CCccccCc-------CCCcceeeHHHHHHHHHHHhcCcCcCceEEecCCCcCHHHHHHHHHHhCcccCCCCCCCCcCccc
Confidence            33222211       1258999999999999999987766678888888999999999999998755455443332222 


Q ss_pred             cccccchHHHHhcCCccccCHHHHHHHHHHHHHHcCCCC
Q 035985          255 AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK  293 (293)
Q Consensus       255 ~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~~~~  293 (293)
                      .....|++|+++|||+|+++++++|+++++|+++.+.+|
T Consensus       288 ~~~~~d~~k~~~lG~~p~~~l~egl~~~i~~~~~~~~~~  326 (351)
T PLN02650        288 KSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLIP  326 (351)
T ss_pred             ccccCChHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            455678899877999999999999999999999998775

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=2.2e-38  Score=269.22  Aligned_cols=255  Identities=20%  Similarity=0.238  Sum_probs=198.4

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      .++.++.+|+.|.+.+.++++++|+|||+|+...  ....++. .+++.|+.++.+++++|++.+ +++|||+||.+ +|
T Consensus        69 ~~~~~~~~Di~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~-~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~-vy  145 (348)
T PRK15181         69 SRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPI-ATNSANIDGFLNMLTAARDAH-VSSFTYAASSS-TY  145 (348)
T ss_pred             CceEEEEccCCCHHHHHHHhhCCCEEEECccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEeechH-hh
Confidence            3688999999999999999999999999999754  2223555 789999999999999999998 99999999987 66


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC--CccHHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI--PSSVALA  170 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~--~~~~~~~  170 (293)
                      +....   .+..|++         +..|.+.|+.+|..+|.+++.+.++++++++++||+++|||++.+..  ...++.+
T Consensus       146 g~~~~---~~~~e~~---------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~  213 (348)
T PRK15181        146 GDHPD---LPKIEER---------IGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRW  213 (348)
T ss_pred             CCCCC---CCCCCCC---------CCCCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHH
Confidence            54322   3556665         55678899999999999999998888999999999999999876542  2345554


Q ss_pred             H-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEE-eccCCCHHHHHHHHHHhCCCCCC-
Q 035985          171 A-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYIC-CAVNTSVPELAKFLNKRFPEYKV-  244 (293)
Q Consensus       171 ~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~-  244 (293)
                      + .++.++...+.+ +|    ...++|+|++|+|+++++++....   .+++||+ +++.+|++|+++.+.+.++.... 
T Consensus       214 ~~~~~~~~~i~~~g-~g----~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~  288 (348)
T PRK15181        214 ILSLLKDEPIYING-DG----STSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNE  288 (348)
T ss_pred             HHHHHcCCCcEEeC-CC----CceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCccccc
Confidence            4 445566554443 22    336999999999999998775432   4568977 67899999999999998863211 


Q ss_pred             ----CCCCCCCC-cc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          245 ----PTDFGDFP-SE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       245 ----~~~~~~~~-~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                          ...+.... .. ....+|.+|+++ |||+|+++++|+|+++++|++.+
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~  340 (348)
T PRK15181        289 QSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340 (348)
T ss_pred             ccCCCcccCCCCCCcccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence                11111111 11 456789999998 99999999999999999999876

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.8e-39  Score=248.13  Aligned_cols=265  Identities=22%  Similarity=0.233  Sum_probs=212.1

Q ss_pred             ccchhcccCCCCeEEEecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCcc
Q 035985            5 ISPLIALQELGELKIFRADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVK   80 (293)
Q Consensus         5 ~~~l~~~~~~~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   80 (293)
                      ++.|+..-+.++.+++++|+.+...+..++.  .+|.|+|+|+..+  .+..++. +....|+.++..|+++++..|+++
T Consensus        47 ~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vihfaa~t~vd~s~~~~~-~~~~nnil~t~~Lle~~~~sg~i~  125 (331)
T KOG0747|consen   47 LKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIHFAAQTHVDRSFGDSF-EFTKNNILSTHVLLEAVRVSGNIR  125 (331)
T ss_pred             cchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhhhHhhhhhhhhcCchH-HHhcCCchhhhhHHHHHHhccCee
Confidence            3444444444889999999999888877775  6899999999875  3334566 788899999999999999998899


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLT  160 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~  160 (293)
                      +|||+||.. +||.....  ....|.+         .++|.++|+.+|+++|..++++.++++++++++|.++||||++.
T Consensus       126 ~fvhvSTde-VYGds~~~--~~~~E~s---------~~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~  193 (331)
T KOG0747|consen  126 RFVHVSTDE-VYGDSDED--AVVGEAS---------LLNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQY  193 (331)
T ss_pred             EEEEecccc-eecCcccc--ccccccc---------cCCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcC
Confidence            999999997 77766543  2233666         88999999999999999999999999999999999999999986


Q ss_pred             CCCCccHHHHHH-HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHh
Q 035985          161 PDIPSSVALAAT-LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKR  238 (293)
Q Consensus       161 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~  238 (293)
                      +.  ..++.++. +..+++..+.+.+     ...++|+|++|+++++-+++...+.+.+||+ +...++..|+++.|.+.
T Consensus       194 ~~--klipkFi~l~~~~~~~~i~g~g-----~~~rs~l~veD~~ea~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~el  266 (331)
T KOG0747|consen  194 PE--KLIPKFIKLAMRGKEYPIHGDG-----LQTRSYLYVEDVSEAFKAVLEKGELGEIYNIGTDDEMRVIDLAKDICEL  266 (331)
T ss_pred             hH--HHhHHHHHHHHhCCCcceecCc-----ccceeeEeHHHHHHHHHHHHhcCCccceeeccCcchhhHHHHHHHHHHH
Confidence            54  34555555 4456666565543     3379999999999999999999777889965 77889999988888877


Q ss_pred             CCC----CCCCCC---CCCCCcc-cccccchHHHHhcCCccccCHHHHHHHHHHHHHHc
Q 035985          239 FPE----YKVPTD---FGDFPSE-AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       239 ~~~----~~~~~~---~~~~~~~-~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +..    ...+..   +.+.+.. .+..++.+|+++|||+|++++++|++.+++|+.++
T Consensus       267 i~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw~~~~p~~eGLrktie~y~~~  325 (331)
T KOG0747|consen  267 FEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGWRPTTPWEEGLRKTIEWYTKN  325 (331)
T ss_pred             HHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCCcccCcHHHHHHHHHHHHHhh
Confidence            642    222211   3334444 67889999999999999999999999999999875

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=3e-37  Score=260.09  Aligned_cols=265  Identities=36%  Similarity=0.527  Sum_probs=200.3

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh-cc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV-SI   93 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~-~~   93 (293)
                      ++++++.+|++|++.+.++++++|+|||+|+.......++....++.|+.++.+++++|++...++|||++||.+++ ++
T Consensus        56 ~~~~~~~~Dl~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~  135 (322)
T PLN02986         56 ERLKLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFR  135 (322)
T ss_pred             CceEEEecCCCCcchHHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecC
Confidence            46899999999999999999999999999997643333443257889999999999999986338999999998754 33


Q ss_pred             cccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           94 NAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        94 ~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                      ......+.+++|+.|.....   +..+.+.|+.+|..+|++++.+.++++++++++||+++|||...+........+...
T Consensus       136 ~~~~~~~~~~~E~~~~~p~~---~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~  212 (322)
T PLN02986        136 QPPIEANDVVDETFFSDPSL---CRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDF  212 (322)
T ss_pred             CccCCCCCCcCcccCCChHH---hhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHH
Confidence            32111124577887643221   123567899999999999999998889999999999999998655332223333444


Q ss_pred             HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 035985          174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPS  253 (293)
Q Consensus       174 ~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~  253 (293)
                      +.+...  .+       ...++|||++|+|+++++++.++..+++||++++.+|++|+++.+++.+|...++........
T Consensus       213 ~~g~~~--~~-------~~~~~~v~v~Dva~a~~~al~~~~~~~~yni~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~  283 (322)
T PLN02986        213 INGKNL--FN-------NRFYRFVDVRDVALAHIKALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESEM  283 (322)
T ss_pred             HcCCCC--CC-------CcCcceeEHHHHHHHHHHHhcCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccc
Confidence            444432  11       225899999999999999999876667998888899999999999999986544432111100


Q ss_pred             c-cccccchHHHHhcCCccccCHHHHHHHHHHHHHHcCCC
Q 035985          254 E-AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML  292 (293)
Q Consensus       254 ~-~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~~~  292 (293)
                      . ....+|++|+++|||+|+ +++|+|+++++|+++.|+|
T Consensus       284 ~~~~~~~d~~~~~~lg~~~~-~l~e~~~~~~~~~~~~~~~  322 (322)
T PLN02986        284 NEMICKVCVEKVKNLGVEFT-PMKSSLRDTILSLKEKCLL  322 (322)
T ss_pred             cccCCccCHHHHHHcCCccc-CHHHHHHHHHHHHHHcCCC
Confidence            1 222489999988999997 9999999999999999876

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=7e-37  Score=258.09  Aligned_cols=265  Identities=38%  Similarity=0.558  Sum_probs=198.6

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcC-CCccEEEEecccchh-c
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT-KTVKRVILTSSAAAV-S   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~-~   92 (293)
                      ++++++++|++|++.+.++++++|+|||+|+.......++...+++.|+.++.+++++|++. + +++|||+||.+++ |
T Consensus        55 ~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y  133 (322)
T PLN02662         55 ERLHLFKANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAY  133 (322)
T ss_pred             CceEEEeccccCcchHHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcC
Confidence            47899999999999999999999999999997654333443267889999999999999987 6 8999999998643 4


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAAT  172 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~  172 (293)
                      +........+++|+.+.....   .....+.|+.+|..+|++++.+.++++++++++||+++|||+..+........+..
T Consensus       134 ~~~~~~~~~~~~E~~~~~p~~---~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~  210 (322)
T PLN02662        134 NGKPLTPDVVVDETWFSDPAF---CEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILN  210 (322)
T ss_pred             CCcCCCCCCcCCcccCCChhH---hhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHH
Confidence            322111113567765221100   01123589999999999999998888999999999999999865432222233334


Q ss_pred             HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCCCC-
Q 035985          173 LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDF-  251 (293)
Q Consensus       173 ~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~-  251 (293)
                      .+.+... .   .     +..++|+|++|+|++++++++.+...+.|++++..+|++|+++.+.+.++...++...... 
T Consensus       211 ~~~~~~~-~---~-----~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~  281 (322)
T PLN02662        211 LINGAQT-F---P-----NASYRWVDVRDVANAHIQAFEIPSASGRYCLVERVVHYSEVVKILHELYPTLQLPEKCADDK  281 (322)
T ss_pred             HhcCCcc-C---C-----CCCcCeEEHHHHHHHHHHHhcCcCcCCcEEEeCCCCCHHHHHHHHHHHCCCCCCCCCCCCcc
Confidence            4443321 1   1     3369999999999999999998765678877788999999999999998864444332221 


Q ss_pred             CcccccccchHHHHhcCCccccCHHHHHHHHHHHHHHcCCCC
Q 035985          252 PSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK  293 (293)
Q Consensus       252 ~~~~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~~~~  293 (293)
                      +......+|++|+++|||++. +++++++++++|+++.|+++
T Consensus       282 ~~~~~~~~d~~k~~~lg~~~~-~~~~~l~~~~~~~~~~~~~~  322 (322)
T PLN02662        282 PYVPTYQVSKEKAKSLGIEFI-PLEVSLKDTVESLKEKGFLS  322 (322)
T ss_pred             ccccccccChHHHHHhCCccc-cHHHHHHHHHHHHHHcCCCC
Confidence            112556799999999999974 99999999999999999874

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.4e-36  Score=257.51  Aligned_cols=277  Identities=42%  Similarity=0.682  Sum_probs=198.1

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCC----CCcccc-----chhHHHHHHHHHHHHHhcCCCccEEEEe
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSS----DDPETD-----MIKPAIQGVVNVLKACTKTKTVKRVILT   85 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~----~~~~~~-----~~~~n~~~~~~l~~~~~~~~~~~~~v~~   85 (293)
                      ++++++.+|++|.+.+.++++++|+|||+|+......    .++. .     .++.|+.++.+++++|++.+.+++||++
T Consensus        58 ~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~-~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~  136 (353)
T PLN02896         58 DRLRLFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIE-EYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFT  136 (353)
T ss_pred             CeEEEEECCCCCHHHHHHHHcCCCEEEECCccccCCccccccchh-hhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEE
Confidence            4688999999999999999999999999999764221    1232 3     3344569999999999887547899999


Q ss_pred             cccchhcccccCC--CCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC
Q 035985           86 SSAAAVSINAQNV--TGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI  163 (293)
Q Consensus        86 SS~~~~~~~~~~~--~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~  163 (293)
                      ||.+ +|+.....  ...+++|+.+.+.+....+..+.++|+.+|.++|++++.++++++++++++||++||||+..+..
T Consensus       137 SS~~-vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~  215 (353)
T PLN02896        137 SSIS-TLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSV  215 (353)
T ss_pred             echh-hccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCC
Confidence            9987 45422110  01346676432221000012345689999999999999999888999999999999999876554


Q ss_pred             CccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCC
Q 035985          164 PSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYK  243 (293)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~  243 (293)
                      +..+..+...+.+....+....|.+...+.++|||++|+|+++++++..+..++.|++++..++++|+++.+++.++...
T Consensus       216 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~  295 (353)
T PLN02896        216 PSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSN  295 (353)
T ss_pred             CchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCCCCC
Confidence            44444444444444322222222111122479999999999999999876556788888889999999999999987433


Q ss_pred             CCCCCCCC-CcccccccchHHHHhcCCccccCHHHHHHHHHHHHHHcCCCC
Q 035985          244 VPTDFGDF-PSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK  293 (293)
Q Consensus       244 ~~~~~~~~-~~~~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~~~~  293 (293)
                      +...+... ........|++|+++|||+|+++++++|+++++|+++.+.+|
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~lGw~p~~~l~~~i~~~~~~~~~~~~~~  346 (353)
T PLN02896        296 IQVRLDEEKRGSIPSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVDHGFLP  346 (353)
T ss_pred             ccccccccccCccccccCHHHHHHcCCCccCCHHHHHHHHHHHHHHCCCCC
Confidence            32222221 111234568889888999999999999999999999998765

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=3.8e-36  Score=253.77  Aligned_cols=265  Identities=37%  Similarity=0.521  Sum_probs=198.2

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++++|++|.+.+.++++++|+|||+|+.....  ...+. ..++.|+.++.+++++|.+...+++||++||..+++
T Consensus        56 ~~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~  134 (325)
T PLN02989         56 ERLKLFKADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQV-ELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVL  134 (325)
T ss_pred             CceEEEeCCCCCchHHHHHHcCCCEEEEeCCCCCCCCCCChHH-HHHHHHHHHHHHHHHHHHHcCCceEEEEecchhhee
Confidence            368899999999999999999999999999975422  12233 778999999999999998863378999999987565


Q ss_pred             ccccC-CCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHH
Q 035985           93 INAQN-VTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAA  171 (293)
Q Consensus        93 ~~~~~-~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~  171 (293)
                      +.... ....+++|+.+.....   ...+.+.|+.+|..+|.+++.+.++++++++++||+++|||+..+........+.
T Consensus       135 ~~~~~~~~~~~~~E~~~~~p~~---~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~  211 (325)
T PLN02989        135 APETKLGPNDVVDETFFTNPSF---AEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIV  211 (325)
T ss_pred             cCCccCCCCCccCcCCCCchhH---hcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHH
Confidence            53210 0114578887432110   1123468999999999999999988899999999999999987654322223344


Q ss_pred             HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCCCC
Q 035985          172 TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDF  251 (293)
Q Consensus       172 ~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~  251 (293)
                      ..+.++.. + .       ...++|+|++|+|++++.+++++..+++||+++..+|++|+++.+.+.+|...++..-.+.
T Consensus       212 ~~~~~~~~-~-~-------~~~r~~i~v~Dva~a~~~~l~~~~~~~~~ni~~~~~s~~ei~~~i~~~~~~~~~~~~~~~~  282 (325)
T PLN02989        212 ELMKGKNP-F-N-------TTHHRFVDVRDVALAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIADRNEDI  282 (325)
T ss_pred             HHHcCCCC-C-C-------CcCcCeeEHHHHHHHHHHHhcCcccCceEEEecCCCCHHHHHHHHHHHCCCCCCCCCCCCc
Confidence            44444432 2 1       1258999999999999999987665678988888999999999999999853332111111


Q ss_pred             Ccc--cccccchHHHHhcCCccccCHHHHHHHHHHHHHHcCCC
Q 035985          252 PSE--AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML  292 (293)
Q Consensus       252 ~~~--~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~~~  292 (293)
                      ...  .....|++|+++|||.|+++++++|+++++|+++.|.+
T Consensus       283 ~~~~~~~~~~~~~k~~~lg~~p~~~l~~gi~~~~~~~~~~~~~  325 (325)
T PLN02989        283 TELNSVTFNVCLDKVKSLGIIEFTPTETSLRDTVLSLKEKCLV  325 (325)
T ss_pred             ccccccCcCCCHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence            111  35678899998899999999999999999999988763

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=4.1e-35  Score=250.46  Aligned_cols=257  Identities=19%  Similarity=0.236  Sum_probs=196.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcC--------CCccEE
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKT--------KTVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~   82 (293)
                      .+++++.+|++|++.+.++++  ++|+|||+||.....  ..++. .+++.|+.++.+++++|++.        ..+++|
T Consensus        51 ~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~-~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~  129 (355)
T PRK10217         51 ERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPA-AFIETNIVGTYTLLEAARAYWNALTEDKKSAFRF  129 (355)
T ss_pred             CceEEEECCCcChHHHHHHHhhcCCCEEEECCcccCcchhhhChH-HHHHHhhHHHHHHHHHHHHhhhcccccccCceEE
Confidence            357889999999999999998  499999999976422  22444 78999999999999999863        226899


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD  162 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~  162 (293)
                      |++||.+ +|+..... ..+++|+.         +..|.+.|+.+|..+|.+++.++++++++++++||+++|||+..+.
T Consensus       130 i~~SS~~-vyg~~~~~-~~~~~E~~---------~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~  198 (355)
T PRK10217        130 HHISTDE-VYGDLHST-DDFFTETT---------PYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE  198 (355)
T ss_pred             EEecchh-hcCCCCCC-CCCcCCCC---------CCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc
Confidence            9999987 56543210 14578876         6667889999999999999999888899999999999999987532


Q ss_pred             CCccHHHH-HHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCC
Q 035985          163 IPSSVALA-ATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFP  240 (293)
Q Consensus       163 ~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~  240 (293)
                        ..+..+ .+...+++..+.+.+     +..++|+|++|++++++.++.....+++||+ +++.+|++|+++.+++.++
T Consensus       199 --~~~~~~~~~~~~~~~~~~~g~g-----~~~~~~i~v~D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~  271 (355)
T PRK10217        199 --KLIPLMILNALAGKPLPVYGNG-----QQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLE  271 (355)
T ss_pred             --cHHHHHHHHHhcCCCceEeCCC-----CeeeCcCcHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhc
Confidence              234433 344455554444332     4479999999999999999987656678977 6778999999999999886


Q ss_pred             CCC--CCC---------CC-CCCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcC
Q 035985          241 EYK--VPT---------DF-GDFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       241 ~~~--~~~---------~~-~~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      ...  .+.         .+ ...+.. ....+|++|+++ |||+|+++++|+++++++|++.+.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~~  335 (355)
T PRK10217        272 ELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANE  335 (355)
T ss_pred             ccccccccccccccccceecCCCCCCCcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhCH
Confidence            321  111         00 111111 456789999987 999999999999999999998863

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.5e-34  Score=250.22  Aligned_cols=252  Identities=19%  Similarity=0.220  Sum_probs=190.8

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++.+|+.+.     .+.++|+|||+|+....  ...++. .+++.|+.++.+++++|++.+ + +|||+||.+ +|
T Consensus       168 ~~~~~~~~Di~~~-----~~~~~D~ViHlAa~~~~~~~~~~p~-~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~-VY  238 (436)
T PLN02166        168 PRFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKYNPV-KTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSE-VY  238 (436)
T ss_pred             CceEEEECccccc-----cccCCCEEEECceeccchhhccCHH-HHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHH-Hh
Confidence            4678888888764     34589999999987542  223455 788999999999999999988 5 899999987 66


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHH-H
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALA-A  171 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~-~  171 (293)
                      +....   .+++|+.|....    +..|.+.|+.+|..+|++++.+++.++++++++||+++||+++.......+..+ .
T Consensus       239 g~~~~---~p~~E~~~~~~~----p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~  311 (436)
T PLN02166        239 GDPLE---HPQKETYWGNVN----PIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVA  311 (436)
T ss_pred             CCCCC---CCCCccccccCC----CCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHH
Confidence            54422   456777543221    455678999999999999999998889999999999999998654333344444 4


Q ss_pred             HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCCC
Q 035985          172 TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFGD  250 (293)
Q Consensus       172 ~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~  250 (293)
                      +.+.++...+.+.+     +..++|+|++|++++++.+++.. ..++||+ +++.+|++|+++.|++.+|.. ....+.+
T Consensus       312 ~~l~~~~i~v~g~g-----~~~rdfi~V~Dva~ai~~~~~~~-~~giyNIgs~~~~Si~ela~~I~~~~g~~-~~i~~~p  384 (436)
T PLN02166        312 QTIRKQPMTVYGDG-----KQTRSFQYVSDLVDGLVALMEGE-HVGPFNLGNPGEFTMLELAEVVKETIDSS-ATIEFKP  384 (436)
T ss_pred             HHhcCCCcEEeCCC-----CeEEeeEEHHHHHHHHHHHHhcC-CCceEEeCCCCcEeHHHHHHHHHHHhCCC-CCeeeCC
Confidence            44456555444322     33699999999999999998754 4568977 678899999999999998742 2222222


Q ss_pred             CC-cc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          251 FP-SE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       251 ~~-~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      .. .. .....|++|+++ |||+|+++++++++++++|++.+
T Consensus       385 ~~~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~  426 (436)
T PLN02166        385 NTADDPHKRKPDISKAKELLNWEPKISLREGLPLMVSDFRNR  426 (436)
T ss_pred             CCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence            11 12 556789999998 89999999999999999999864

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=1.2e-34  Score=251.99  Aligned_cols=262  Identities=15%  Similarity=0.105  Sum_probs=189.6

Q ss_pred             CeEEEecCCCCCcchhhhhc--CCCEEEEecccCCCC--CCCc--cccchhHHHHHHHHHHHHHhcCCCcc-EEEEeccc
Q 035985           16 ELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFS--SDDP--ETDMIKPAIQGVVNVLKACTKTKTVK-RVILTSSA   88 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~--~~~~--~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~   88 (293)
                      +++++.+|++|++.+.++++  ++|+|||+|+.....  ..++  ....++.|+.++.+++++|++.+ ++ +||++||.
T Consensus       114 ~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~  192 (442)
T PLN02572        114 EIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTM  192 (442)
T ss_pred             cceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecc
Confidence            68999999999999999997  589999999764321  1122  11456889999999999999988 75 99999999


Q ss_pred             chhcccccCCCCccccCCCCC-----chhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC
Q 035985           89 AAVSINAQNVTGLVMDEKNWT-----DVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI  163 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~E~~~~-----~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~  163 (293)
                      . +|+...    .+++|....     ..+..+.+..|.++|+.+|..+|.+++.+++++|++++++||+++|||++....
T Consensus       193 ~-vYG~~~----~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~  267 (442)
T PLN02572        193 G-EYGTPN----IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETM  267 (442)
T ss_pred             e-ecCCCC----CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccc
Confidence            7 665432    123332100     000001145678899999999999999999989999999999999999865421


Q ss_pred             ---------------CccHHHH-HHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-C--CcEEEecc
Q 035985          164 ---------------PSSVALA-ATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-S--GRYICCAV  224 (293)
Q Consensus       164 ---------------~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~--~~y~~~~~  224 (293)
                                     ...+..+ .+...++++.+.+.+     +..++|+||+|++++++.++++... +  .+||++++
T Consensus       268 ~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G-----~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~  342 (442)
T PLN02572        268 MDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKG-----GQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTE  342 (442)
T ss_pred             cccccccccCcccchhhHHHHHHHHHhcCCCceecCCC-----CEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCC
Confidence                           1223333 344456554444432     3369999999999999999986532 3  36788678


Q ss_pred             CCCHHHHHHHHHHh---CCCCCCCCCCCCCC--cc--cccccchHHHHhcCCcccc---CHHHHHHHHHHHHHHc
Q 035985          225 NTSVPELAKFLNKR---FPEYKVPTDFGDFP--SE--AKLILSSEKLISEGFCFKY---GIEDIYDQTVEYLKTK  289 (293)
Q Consensus       225 ~~t~~e~~~~i~~~---~~~~~~~~~~~~~~--~~--~~~~~d~~k~~~lG~~~~~---~~~~~i~~~i~~~~~~  289 (293)
                      .+|++|+++.+++.   +|. +++..+.+.+  ..  .....|.+|+++|||+|++   ++++++.+++.||+.+
T Consensus       343 ~~si~el~~~i~~~~~~~g~-~~~~~~~p~~~~~~~~~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~  416 (442)
T PLN02572        343 QFSVNELAKLVTKAGEKLGL-DVEVISVPNPRVEAEEHYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDR  416 (442)
T ss_pred             ceeHHHHHHHHHHHHHhhCC-CCCeeeCCCCcccccccccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence            89999999999998   663 2332222111  11  3456789999889999998   8999999999999865

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=6.9e-34  Score=245.15  Aligned_cols=263  Identities=19%  Similarity=0.278  Sum_probs=189.3

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++.+|+.|.+.+.++++++|+|||+|+....  ...++. +.+..|+.++.+++++|++.+  ++|||+||.+ +|
T Consensus        65 ~~~~~~~~Dl~d~~~l~~~~~~~d~ViHlAa~~~~~~~~~~~~-~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~-vY  140 (386)
T PLN02427         65 GRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPL-DTIYSNFIDALPVVKYCSENN--KRLIHFSTCE-VY  140 (386)
T ss_pred             CCeEEEEcCCCChHHHHHHhhcCCEEEEcccccChhhhhhChH-HHHHHHHHHHHHHHHHHHhcC--CEEEEEeeee-ee
Confidence            36999999999999999999999999999997542  122344 567789999999999998876  7999999987 66


Q ss_pred             ccccCCCCccccCCCCCchh---------hhc----cCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCC
Q 035985           93 INAQNVTGLVMDEKNWTDVE---------FLS----SEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSL  159 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~---------~~~----~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~  159 (293)
                      +....   ..+.|+.+....         ..+    ....|.+.|+.+|..+|++++.++++++++++++||++||||+.
T Consensus       141 g~~~~---~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~  217 (386)
T PLN02427        141 GKTIG---SFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRM  217 (386)
T ss_pred             CCCcC---CCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCC
Confidence            64321   223333321100         000    01134578999999999999998888899999999999999985


Q ss_pred             CC---------CCCccHHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcEEEe-c-cC
Q 035985          160 TP---------DIPSSVALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRYICC-A-VN  225 (293)
Q Consensus       160 ~~---------~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y~~~-~-~~  225 (293)
                      ..         ..+..+..+. ..+.+++..+.+.+     ...++|+|++|+|++++.+++++.  .+++||++ + +.
T Consensus       218 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g-----~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~  292 (386)
T PLN02427        218 DFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGG-----QSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNE  292 (386)
T ss_pred             CccccccccccccchHHHHHHHHHhcCCCeEEECCC-----CceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCC
Confidence            32         1122333333 34455554444322     336899999999999999998753  34589875 4 48


Q ss_pred             CCHHHHHHHHHHhCCCCCC-C------CCCCCC-----C-cc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          226 TSVPELAKFLNKRFPEYKV-P------TDFGDF-----P-SE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       226 ~t~~e~~~~i~~~~~~~~~-~------~~~~~~-----~-~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +|++|+++.+.+.+|.... +      ...+..     . .. .....|.+|+++ |||+|+++++++|+++++|+++.
T Consensus       293 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~  371 (386)
T PLN02427        293 VTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKT  371 (386)
T ss_pred             ccHHHHHHHHHHHhccccccccccccccccCcccccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHH
Confidence            9999999999999874211 1      011110     0 11 455779999998 99999999999999999998864

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=5.2e-34  Score=242.34  Aligned_cols=253  Identities=17%  Similarity=0.170  Sum_probs=191.7

Q ss_pred             CCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCc---cEEEEecc
Q 035985           15 GELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTV---KRVILTSS   87 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~SS   87 (293)
                      .+++++++|++|.+.+.+++++  +|+|||+|+..+..  ...+. ...+.|+.++.+++++|++.+ +   ++|||+||
T Consensus        55 ~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~-~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS  132 (343)
T TIGR01472        55 ARMKLHYGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPE-YTADVDGIGTLRLLEAVRTLG-LIKSVKFYQAST  132 (343)
T ss_pred             cceeEEEeccCCHHHHHHHHHhCCCCEEEECCcccccchhhhChH-HHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEecc
Confidence            3689999999999999999984  69999999976422  22344 667789999999999999876 5   38999999


Q ss_pred             cchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC-Ccc
Q 035985           88 AAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI-PSS  166 (293)
Q Consensus        88 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~-~~~  166 (293)
                      .+ +|+....   .+++|+.         +..|.+.|+.+|..+|.+++.+++++++++++.|+.++|||+..... ...
T Consensus       133 ~~-vyg~~~~---~~~~E~~---------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~  199 (343)
T TIGR01472       133 SE-LYGKVQE---IPQNETT---------PFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRK  199 (343)
T ss_pred             HH-hhCCCCC---CCCCCCC---------CCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchH
Confidence            97 6664322   4577887         66788999999999999999999888999999999999999754321 122


Q ss_pred             HHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCC
Q 035985          167 VALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKV  244 (293)
Q Consensus       167 ~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~  244 (293)
                      +..++ ....+....+..++|    +..++|+|++|+|++++++++++. .+.||+ +++.+|++|+++.+.+.+|.. .
T Consensus       200 ~~~~~~~~~~~~~~~~~~g~g----~~~rd~i~V~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~-~  273 (343)
T TIGR01472       200 ITRAAAKIKLGLQEKLYLGNL----DAKRDWGHAKDYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKT-L  273 (343)
T ss_pred             HHHHHHHHHcCCCCceeeCCC----ccccCceeHHHHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCC-c
Confidence            33333 333454333332332    347999999999999999998653 468976 678999999999999998842 1


Q ss_pred             CC-------------------CCCC---CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHH
Q 035985          245 PT-------------------DFGD---FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKT  288 (293)
Q Consensus       245 ~~-------------------~~~~---~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~  288 (293)
                      +.                   .+..   .+.. .....|++|+++ |||+|+++++|+|+++++|+++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       274 NWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             ccccccccccccccccCceeEEeCccccCCCccchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence            10                   0111   1111 445679999997 9999999999999999999885

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=1.9e-34  Score=223.43  Aligned_cols=256  Identities=19%  Similarity=0.232  Sum_probs=209.2

Q ss_pred             CCCCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           13 ELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        13 ~~~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      ..++++++.-|+..+     ++.++|.|+|+|++.+..  ..+|. .+...|+.++.+++-.|++.+  +||+++||+. 
T Consensus        73 ~~~~fel~~hdv~~p-----l~~evD~IyhLAapasp~~y~~npv-ktIktN~igtln~lglakrv~--aR~l~aSTse-  143 (350)
T KOG1429|consen   73 GHPNFELIRHDVVEP-----LLKEVDQIYHLAAPASPPHYKYNPV-KTIKTNVIGTLNMLGLAKRVG--ARFLLASTSE-  143 (350)
T ss_pred             cCcceeEEEeechhH-----HHHHhhhhhhhccCCCCcccccCcc-ceeeecchhhHHHHHHHHHhC--ceEEEeeccc-
Confidence            335677777776655     777899999999987633  34566 899999999999999999998  8999999987 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHH
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALA  170 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~  170 (293)
                      +|+.+..   .+..|+.|.+..    +..|.+.|...|..+|.++..+.++.|+.+.|.|++++|||.........+..+
T Consensus       144 VYgdp~~---hpq~e~ywg~vn----pigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf  216 (350)
T KOG1429|consen  144 VYGDPLV---HPQVETYWGNVN----PIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNF  216 (350)
T ss_pred             ccCCccc---CCCccccccccC----cCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHH
Confidence            7777654   466777776664    667888999999999999999999999999999999999998776665555554


Q ss_pred             -HHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCC
Q 035985          171 -ATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFG  249 (293)
Q Consensus       171 -~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~  249 (293)
                       .+++++.+..+.+.+     .+.++|.||+|++++++++++++..+.+.+++.+.+|+.|+++.+.+..+....+....
T Consensus       217 ~~q~lr~epltv~g~G-----~qtRSF~yvsD~Vegll~Lm~s~~~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~  291 (350)
T KOG1429|consen  217 IAQALRGEPLTVYGDG-----KQTRSFQYVSDLVEGLLRLMESDYRGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVE  291 (350)
T ss_pred             HHHHhcCCCeEEEcCC-----cceEEEEeHHHHHHHHHHHhcCCCcCCcccCCccceeHHHHHHHHHHHcCCCcceeecC
Confidence             466677777776644     44799999999999999999998777755667789999999999999986544443334


Q ss_pred             CCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          250 DFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       250 ~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +-+.+ .....|.+++++ |||.|+.+++|+++.++.|++++
T Consensus       292 ~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~~  333 (350)
T KOG1429|consen  292 NGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRER  333 (350)
T ss_pred             CCCCCccccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHHH
Confidence            44444 777899999998 99999999999999999999864

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=1.1e-33  Score=241.28  Aligned_cols=257  Identities=20%  Similarity=0.221  Sum_probs=194.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcC--------CCccEE
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKT--------KTVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~   82 (293)
                      .+++++.+|++|.+++.++++  ++|+|||+|+....  ...++. .+++.|+.++.+++++|++.        +++++|
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~  128 (352)
T PRK10084         50 ERYVFEHADICDRAELDRIFAQHQPDAVMHLAAESHVDRSITGPA-AFIETNIVGTYVLLEAARNYWSALDEDKKNAFRF  128 (352)
T ss_pred             CceEEEEecCCCHHHHHHHHHhcCCCEEEECCcccCCcchhcCch-hhhhhhhHHHHHHHHHHHHhccccccccccceeE
Confidence            357889999999999999987  48999999997642  123345 88999999999999999874        226799


Q ss_pred             EEecccchhcccccCC-------CCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCcc
Q 035985           83 ILTSSAAAVSINAQNV-------TGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMS  155 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~-------~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~  155 (293)
                      |++||.+ +|+.....       ...+++|++         +..|.+.|+.+|..+|.+++.+++.++++++++|++++|
T Consensus       129 i~~SS~~-vyg~~~~~~~~~~~~~~~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~  198 (352)
T PRK10084        129 HHISTDE-VYGDLPHPDEVENSEELPLFTETT---------AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNY  198 (352)
T ss_pred             EEecchh-hcCCCCccccccccccCCCccccC---------CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccee
Confidence            9999987 55532110       002356666         667889999999999999999988889999999999999


Q ss_pred             CCCCCCCCCccHHHH-HHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHH
Q 035985          156 GPSLTPDIPSSVALA-ATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAK  233 (293)
Q Consensus       156 G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~  233 (293)
                      ||+..+.  ..+..+ ..+..++...+.+.+     +..++|+|++|+|+++..+++.+..+++||+ +++.+|++++++
T Consensus       199 Gp~~~~~--~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~  271 (352)
T PRK10084        199 GPYHFPE--KLIPLVILNALEGKPLPIYGKG-----DQIRDWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVL  271 (352)
T ss_pred             CCCcCcc--chHHHHHHHHhcCCCeEEeCCC-----CeEEeeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHH
Confidence            9986432  334443 344445544443322     4479999999999999999987655678987 567899999999


Q ss_pred             HHHHhCCCCCCCCC---------CCCCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcC
Q 035985          234 FLNKRFPEYKVPTD---------FGDFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       234 ~i~~~~~~~~~~~~---------~~~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      .+++.++.. .|..         ....+.. ....+|++|+++ |||+|+++++++|+++++|++++.
T Consensus       272 ~i~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~  338 (352)
T PRK10084        272 TICDLLDEI-VPKATSYREQITYVADRPGHDRRYAIDASKISRELGWKPQETFESGIRKTVEWYLANT  338 (352)
T ss_pred             HHHHHhccc-cccccchhhhccccccCCCCCceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhCH
Confidence            999988742 1111         1111222 455789999997 999999999999999999998753

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=1.1e-33  Score=245.26  Aligned_cols=252  Identities=19%  Similarity=0.221  Sum_probs=189.0

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++.+|+.++     ++.++|+|||+|+....  ...++. ..++.|+.++.+++++|++.+ + +|||+||.. +|
T Consensus       167 ~~~~~i~~D~~~~-----~l~~~D~ViHlAa~~~~~~~~~~p~-~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~-VY  237 (442)
T PLN02206        167 PNFELIRHDVVEP-----ILLEVDQIYHLACPASPVHYKFNPV-KTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSE-VY  237 (442)
T ss_pred             CceEEEECCccCh-----hhcCCCEEEEeeeecchhhhhcCHH-HHHHHHHHHHHHHHHHHHHhC-C-EEEEECChH-Hh
Confidence            4688888888765     34579999999987542  123455 788999999999999999998 5 899999997 56


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHH-H
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALA-A  171 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~-~  171 (293)
                      +....   .+.+|+.|....    +..+.+.|+.+|..+|+++..+.++++++++++||+++|||+........+..+ .
T Consensus       238 g~~~~---~p~~E~~~~~~~----P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~  310 (442)
T PLN02206        238 GDPLQ---HPQVETYWGNVN----PIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVA  310 (442)
T ss_pred             CCCCC---CCCCccccccCC----CCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHH
Confidence            54322   356676543221    344567899999999999999988889999999999999998653322344444 3


Q ss_pred             HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCCC
Q 035985          172 TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFGD  250 (293)
Q Consensus       172 ~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~  250 (293)
                      ..+.+++..+.+.+     +..++|+|++|+|++++.+++.. ..+.||+ +++.+|++|+++.+++.++.. ....+.+
T Consensus       311 ~~l~~~~i~i~g~G-----~~~rdfi~V~Dva~ai~~a~e~~-~~g~yNIgs~~~~sl~Elae~i~~~~g~~-~~i~~~p  383 (442)
T PLN02206        311 QALRKEPLTVYGDG-----KQTRSFQFVSDLVEGLMRLMEGE-HVGPFNLGNPGEFTMLELAKVVQETIDPN-AKIEFRP  383 (442)
T ss_pred             HHHcCCCcEEeCCC-----CEEEeEEeHHHHHHHHHHHHhcC-CCceEEEcCCCceeHHHHHHHHHHHhCCC-CceeeCC
Confidence            44555655544432     33689999999999999998765 4568977 568899999999999998632 1221111


Q ss_pred             -CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          251 -FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       251 -~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                       .... ....+|++|+++ |||+|+++++|+|+++++|++..
T Consensus       384 ~~~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~  425 (442)
T PLN02206        384 NTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQR  425 (442)
T ss_pred             CCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence             1112 556789999998 99999999999999999999864

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=2e-33  Score=240.13  Aligned_cols=256  Identities=16%  Similarity=0.104  Sum_probs=191.0

Q ss_pred             eEEEecCCCCCcchhhhhcCCCEEEEecccCCC---CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcc
Q 035985           17 LKIFRADLTDEASFDAPISRSDIVFHVATPVNF---SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSI   93 (293)
Q Consensus        17 v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~   93 (293)
                      ++++.+|++|.+.+.++++++|+|||+|+..+.   ...++. ..+..|+.++.+++++|++.+ +++|||+||.+ +|+
T Consensus        66 ~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~-~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~-vYg  142 (370)
T PLN02695         66 HEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHS-VIMYNNTMISFNMLEAARING-VKRFFYASSAC-IYP  142 (370)
T ss_pred             ceEEECCCCCHHHHHHHHhCCCEEEEcccccCCccccccCch-hhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchh-hcC
Confidence            578889999999888888999999999987531   112333 567789999999999999988 99999999987 666


Q ss_pred             cccCC-CCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC--ccHHHH
Q 035985           94 NAQNV-TGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP--SSVALA  170 (293)
Q Consensus        94 ~~~~~-~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~--~~~~~~  170 (293)
                      ..... ...++.|+..       .+..|.+.|+.+|..+|++++.++++++++++++||+++|||+......  .....+
T Consensus       143 ~~~~~~~~~~~~E~~~-------~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~  215 (370)
T PLN02695        143 EFKQLETNVSLKESDA-------WPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAF  215 (370)
T ss_pred             CccccCcCCCcCcccC-------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHH
Confidence            44211 0013455431       0456788999999999999999988889999999999999997643221  123334


Q ss_pred             HHH-Hh-CCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCC
Q 035985          171 ATL-IT-GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTD  247 (293)
Q Consensus       171 ~~~-~~-~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~  247 (293)
                      +.. +. +....+.+.+     +..++|+|++|++++++++++.. .++.||+ +++.+|++|+++.+.+..|. +++..
T Consensus       216 ~~~~~~~~~~i~~~g~g-----~~~r~~i~v~D~a~ai~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~-~~~i~  288 (370)
T PLN02695        216 CRKALTSTDEFEMWGDG-----KQTRSFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENK-KLPIK  288 (370)
T ss_pred             HHHHHcCCCCeEEeCCC-----CeEEeEEeHHHHHHHHHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCC-CCCce
Confidence            333 33 2333333322     34799999999999999988765 4568877 66889999999999998874 23333


Q ss_pred             CCCCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          248 FGDFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       248 ~~~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      ..+.+.. .....|++|+++ |||+|+++++++|+++++|+++.
T Consensus       289 ~~~~~~~~~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~~  332 (370)
T PLN02695        289 HIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQ  332 (370)
T ss_pred             ecCCCCCccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence            2222222 445689999997 99999999999999999999864

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=1e-33  Score=259.55  Aligned_cols=258  Identities=21%  Similarity=0.256  Sum_probs=197.1

Q ss_pred             CCeEEEecCCCCCcchhhhh--cCCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPI--SRSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~--~~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      ++++++.+|++|.+.+.+++  .++|+|||+|+.....  ..++. ++++.|+.++.+++++|++.+.+++|||+||.. 
T Consensus        57 ~~v~~~~~Dl~d~~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~-~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~-  134 (668)
T PLN02260         57 PNFKFVKGDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSF-EFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE-  134 (668)
T ss_pred             CCeEEEECCCCChHHHHHHHhhcCCCEEEECCCccCchhhhhCHH-HHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchH-
Confidence            57999999999998888766  5799999999986532  22344 778999999999999999987689999999997 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHH
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALA  170 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~  170 (293)
                      +|+..........+|+.         +..|.+.|+.+|..+|.+++.+.++++++++++||++|||+++.+.  ..+..+
T Consensus       135 vyg~~~~~~~~~~~E~~---------~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~--~~i~~~  203 (668)
T PLN02260        135 VYGETDEDADVGNHEAS---------QLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKF  203 (668)
T ss_pred             HhCCCccccccCccccC---------CCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc--cHHHHH
Confidence            66544321001124554         5567889999999999999999888899999999999999986432  344444


Q ss_pred             HHH-HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCC-CCC
Q 035985          171 ATL-ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKV-PTD  247 (293)
Q Consensus       171 ~~~-~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~-~~~  247 (293)
                      +.. ..+....+.+.+     +..++|+|++|+|+++.++++....+++||+ +++.+|++|+++.+++.+|.... ...
T Consensus       204 ~~~a~~g~~i~i~g~g-----~~~r~~ihV~Dva~a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~  278 (668)
T PLN02260        204 ILLAMQGKPLPIHGDG-----SNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIK  278 (668)
T ss_pred             HHHHhCCCCeEEecCC-----CceEeeEEHHHHHHHHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceee
Confidence            433 345544444322     3468999999999999999987666789977 56889999999999999984221 111


Q ss_pred             C-CCCCcc-cccccchHHHHhcCCccccCHHHHHHHHHHHHHHcC
Q 035985          248 F-GDFPSE-AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       248 ~-~~~~~~-~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      . ...+.. ....+|++|+++|||+|+++++|+++++++|+++++
T Consensus       279 ~~~~~p~~~~~~~~d~~k~~~lGw~p~~~~~egl~~~i~w~~~~~  323 (668)
T PLN02260        279 FVENRPFNDQRYFLDDQKLKKLGWQERTSWEEGLKKTMEWYTSNP  323 (668)
T ss_pred             ecCCCCCCcceeecCHHHHHHcCCCCCCCHHHHHHHHHHHHHhCh
Confidence            1 112222 456689999988999999999999999999999764

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.7e-33  Score=236.98  Aligned_cols=256  Identities=18%  Similarity=0.223  Sum_probs=195.6

Q ss_pred             CCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      ++++++.+|++|++++.+++++  +|+|||+|+.....  ..++. .+++.|+.++.+++++|++.+...++|++||.. 
T Consensus        50 ~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~-  127 (317)
T TIGR01181        50 PRYRFVKGDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPA-AFIETNVVGTYTLLEAVRKYWHEFRFHHISTDE-  127 (317)
T ss_pred             CCcEEEEcCCcCHHHHHHHHhhcCCCEEEEcccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHhcCCCceEEEeeccc-
Confidence            4688999999999999999986  99999999976421  22344 778999999999999999875223899999987 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHH
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALA  170 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~  170 (293)
                      +|+.....  .+++|+.         +..|.+.|+.+|..+|.+++.++.+.+++++++||+.+||+...+.  ..+..+
T Consensus       128 v~g~~~~~--~~~~e~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~--~~~~~~  194 (317)
T TIGR01181       128 VYGDLEKG--DAFTETT---------PLAPSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE--KLIPLM  194 (317)
T ss_pred             eeCCCCCC--CCcCCCC---------CCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc--cHHHHH
Confidence            55543322  3567776         5567789999999999999999888899999999999999976432  344444


Q ss_pred             H-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCC
Q 035985          171 A-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDF  248 (293)
Q Consensus       171 ~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~  248 (293)
                      + ....++...+...+     +..++|+|++|+++++..++++...+++|++ +++.+|++|+++.+.+.+|........
T Consensus       195 ~~~~~~~~~~~~~~~g-----~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~  269 (317)
T TIGR01181       195 ITNALAGKPLPVYGDG-----QQVRDWLYVEDHCRAIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITH  269 (317)
T ss_pred             HHHHhcCCCceEeCCC-----ceEEeeEEHHHHHHHHHHHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccc
Confidence            3 33445444333322     3368999999999999999987666679977 667899999999999999853221111


Q ss_pred             C-CCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcC
Q 035985          249 G-DFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       249 ~-~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      . ..+.. .....|++|+++ |||+|+++++++++++++|+++++
T Consensus       270 ~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~  314 (317)
T TIGR01181       270 VEDRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNE  314 (317)
T ss_pred             cCCCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence            1 11212 344689999986 999999999999999999998875

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=1.5e-33  Score=239.82  Aligned_cols=261  Identities=17%  Similarity=0.247  Sum_probs=191.5

Q ss_pred             CCeEEEecCCC-CCcchhhhhcCCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           15 GELKIFRADLT-DEASFDAPISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        15 ~~v~~v~~Dl~-d~~~~~~~~~~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      ++++++.+|+. +.+.+.++++++|+|||+|+....  ...++. ..++.|+.++.+++++|++.+  ++|||+||.. +
T Consensus        46 ~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~-~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~-v  121 (347)
T PRK11908         46 PRMHFFEGDITINKEWIEYHVKKCDVILPLVAIATPATYVKQPL-RVFELDFEANLPIVRSAVKYG--KHLVFPSTSE-V  121 (347)
T ss_pred             CCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCChHHhhcCcH-HHHHHHHHHHHHHHHHHHhcC--CeEEEEecce-e
Confidence            46999999998 667788888999999999987542  234565 778999999999999999876  6999999997 5


Q ss_pred             cccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC------CCc
Q 035985           92 SINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD------IPS  165 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~------~~~  165 (293)
                      |+....   .+++|+.+.....  ....|.+.|+.+|..+|+.++.++.+++++++++||+++|||+..+.      ...
T Consensus       122 yg~~~~---~~~~ee~~~~~~~--~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~  196 (347)
T PRK11908        122 YGMCPD---EEFDPEASPLVYG--PINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSR  196 (347)
T ss_pred             eccCCC---cCcCccccccccC--cCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcc
Confidence            654322   3466654211100  01246779999999999999999888899999999999999986431      123


Q ss_pred             cHHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEec--cCCCHHHHHHHHHHhC
Q 035985          166 SVALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICCA--VNTSVPELAKFLNKRF  239 (293)
Q Consensus       166 ~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~~--~~~t~~e~~~~i~~~~  239 (293)
                      .+..++ +.+.+.+..+.. +|    +..++|+|++|++++++.+++++.   .+++||+++  ..+|++|+++.|.+.+
T Consensus       197 ~i~~~~~~~~~~~~~~~~~-~g----~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~  271 (347)
T PRK11908        197 VVTQFLGHIVRGEPISLVD-GG----SQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELA  271 (347)
T ss_pred             hHHHHHHHHhCCCceEEec-CC----ceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHh
Confidence            344443 444565544433 22    337999999999999999998753   356898754  4799999999999887


Q ss_pred             CCCC-C-----CCCCCCC--------C-cc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          240 PEYK-V-----PTDFGDF--------P-SE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       240 ~~~~-~-----~~~~~~~--------~-~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +..+ +     +..+...        . .. .....|++|+++ |||+|+++++++++++++|+++.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~  338 (347)
T PRK11908        272 AEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGH  338 (347)
T ss_pred             cCcccccccccccccccCCchhccCcCcchhccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence            7321 1     0111110        0 01 345578899997 99999999999999999999875

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2.4e-33  Score=238.74  Aligned_cols=254  Identities=21%  Similarity=0.221  Sum_probs=191.4

Q ss_pred             CeEEEecCCCCCcchhhhhcC--CCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           16 ELKIFRADLTDEASFDAPISR--SDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      +++++.+|++|.+.+.+++++  +|+|||+|+...  ....++. ..++.|+.++.++++++++.+.+++||++||.. +
T Consensus        53 ~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~-v  130 (349)
T TIGR02622        53 KIEDHFGDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPL-ETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDK-C  130 (349)
T ss_pred             CceEEEccCCCHHHHHHHHhhcCCCEEEECCcccccccchhCHH-HHHHHhHHHHHHHHHHHHhcCCCCEEEEEechh-h
Confidence            577899999999999999874  699999999643  2223455 788999999999999998775468999999987 5


Q ss_pred             cccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-------CceEEEEccCCccCCCCCCCCC
Q 035985           92 SINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-------NIDLITVIPSLMSGPSLTPDIP  164 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~  164 (293)
                      |+.....  .+++|+.         +..|.++|+.+|..+|.+++.+++++       +++++++||+++|||+.... .
T Consensus       131 yg~~~~~--~~~~e~~---------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~  198 (349)
T TIGR02622       131 YRNDEWV--WGYRETD---------PLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE-D  198 (349)
T ss_pred             hCCCCCC--CCCccCC---------CCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh-h
Confidence            6543211  3466776         55678899999999999999887654       89999999999999975322 2


Q ss_pred             ccHHHHHHHH-hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC-----CCCCcEEEec---cCCCHHHHHHHH
Q 035985          165 SSVALAATLI-TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE-----SASGRYICCA---VNTSVPELAKFL  235 (293)
Q Consensus       165 ~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~-----~~~~~y~~~~---~~~t~~e~~~~i  235 (293)
                      ..++.++... .+....+  .+|    +..++|+|++|++++++.+++..     ..++.||+++   +++++.++++.+
T Consensus       199 ~~~~~~~~~~~~g~~~~~--~~g----~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i  272 (349)
T TIGR02622       199 RLIPDVIRAFSSNKIVII--RNP----DATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDA  272 (349)
T ss_pred             hhhHHHHHHHhcCCCeEE--CCC----CcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHH
Confidence            3445555544 4444333  232    34799999999999999887642     2356898853   689999999999


Q ss_pred             HHhCCCCCCCCCCCC---CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          236 NKRFPEYKVPTDFGD---FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       236 ~~~~~~~~~~~~~~~---~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      .+.++...+......   .+.. .....|++|+++ |||+|+++++++|+++++|++..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~~  331 (349)
T TIGR02622       273 LEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKAW  331 (349)
T ss_pred             HHHhcCCCCceeeccCCCCCcccceeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            988764333322211   1112 556789999998 99999999999999999999764

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=2.1e-33  Score=256.24  Aligned_cols=263  Identities=16%  Similarity=0.223  Sum_probs=194.1

Q ss_pred             CCeEEEecCCCCCcc-hhhhhcCCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           15 GELKIFRADLTDEAS-FDAPISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~-~~~~~~~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      ++++++.+|++|... +.++++++|+|||+|+....  ...++. .+++.|+.++.+++++|++.+  ++|||+||.+ +
T Consensus       360 ~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~-~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~-v  435 (660)
T PRK08125        360 PRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPL-RVFELDFEENLKIIRYCVKYN--KRIIFPSTSE-V  435 (660)
T ss_pred             CceEEEeccccCcHHHHHHHhcCCCEEEECccccCchhhccCHH-HHHHhhHHHHHHHHHHHHhcC--CeEEEEcchh-h
Confidence            478999999999765 57788999999999997642  223455 778999999999999999987  7999999987 6


Q ss_pred             cccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC------CCc
Q 035985           92 SINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD------IPS  165 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~------~~~  165 (293)
                      |+....   .+++|+++.....  ....|.+.|+.+|..+|++++.++++++++++++||+++|||++...      ...
T Consensus       436 yg~~~~---~~~~E~~~~~~~~--p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~  510 (660)
T PRK08125        436 YGMCTD---KYFDEDTSNLIVG--PINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSR  510 (660)
T ss_pred             cCCCCC---CCcCccccccccC--CCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccc
Confidence            664322   4677876421100  01135678999999999999999888899999999999999986431      112


Q ss_pred             cHHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEe-cc-CCCHHHHHHHHHHhC
Q 035985          166 SVALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICC-AV-NTSVPELAKFLNKRF  239 (293)
Q Consensus       166 ~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~-~~-~~t~~e~~~~i~~~~  239 (293)
                      .+..++ ....+++..+.+.+     +..++|+|++|+|++++++++++.   .+++||++ ++ .+|++|+++.+.+.+
T Consensus       511 ~i~~~i~~~~~~~~i~~~g~g-----~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~  585 (660)
T PRK08125        511 AITQLILNLVEGSPIKLVDGG-----KQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASF  585 (660)
T ss_pred             hHHHHHHHhcCCCCeEEeCCC-----ceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHh
Confidence            344443 44445554443322     337999999999999999998653   24589775 44 699999999999998


Q ss_pred             CCCCCCCCCCCC---------------Ccc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcCC
Q 035985          240 PEYKVPTDFGDF---------------PSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKGM  291 (293)
Q Consensus       240 ~~~~~~~~~~~~---------------~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~~  291 (293)
                      |...+...++..               ... .....|++|+++ |||+|+++++++|+++++|+++..-
T Consensus       586 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~  654 (660)
T PRK08125        586 EKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVD  654 (660)
T ss_pred             ccCcccccCCccccccccccccccccccccccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhccc
Confidence            743221111110               001 345679999998 9999999999999999999998754

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=4.6e-33  Score=236.31  Aligned_cols=254  Identities=16%  Similarity=0.129  Sum_probs=193.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCcc-----EEEEe
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVK-----RVILT   85 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~v~~   85 (293)
                      .+++++.+|++|.+.+.++++  ++|+|||+|+..+..  ..++. ..++.|+.++.++++++++.+ ++     +||++
T Consensus        60 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~-~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~  137 (340)
T PLN02653         60 ARMKLHYGDLSDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPD-YTADVVATGALRLLEAVRLHG-QETGRQIKYYQA  137 (340)
T ss_pred             CceEEEEecCCCHHHHHHHHHHcCCCEEEECCcccchhhhhhChh-HHHHHHHHHHHHHHHHHHHhc-cccccceeEEEe
Confidence            358899999999999999887  479999999975422  22344 667899999999999999887 54     89999


Q ss_pred             cccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC-C
Q 035985           86 SSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI-P  164 (293)
Q Consensus        86 SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~-~  164 (293)
                      ||.+ +|+...    .+++|+.         +..|.+.|+.+|..+|.+++.++.+++++++..|+.++|||+..... .
T Consensus       138 Ss~~-vyg~~~----~~~~E~~---------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~  203 (340)
T PLN02653        138 GSSE-MYGSTP----PPQSETT---------PFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVT  203 (340)
T ss_pred             ccHH-HhCCCC----CCCCCCC---------CCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccch
Confidence            9987 666443    3577876         66788999999999999999999888999999999999999754432 1


Q ss_pred             ccHHHHHHH-HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCC
Q 035985          165 SSVALAATL-ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEY  242 (293)
Q Consensus       165 ~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~  242 (293)
                      ..+..++.. ..+....+..++|    +..++|+|++|+|++++.+++... ++.||+ +++++|++|+++.+.+.+|..
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~g~g----~~~rd~i~v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~  278 (340)
T PLN02653        204 RKITRAVGRIKVGLQKKLFLGNL----DASRDWGFAGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLN  278 (340)
T ss_pred             hHHHHHHHHHHcCCCCceEeCCC----cceecceeHHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCC
Confidence            223333323 3444443433332    347999999999999999998753 568866 688999999999999998742


Q ss_pred             -CCCCCCCC---CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          243 -KVPTDFGD---FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       243 -~~~~~~~~---~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                       +....+..   .+.. .....|++|+++ |||+|+++++++|+++++|+++.
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~~  331 (340)
T PLN02653        279 WKDHVEIDPRYFRPAEVDNLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLEL  331 (340)
T ss_pred             CCcceeeCcccCCccccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence             11111111   1222 556789999997 99999999999999999998853

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=3.2e-33  Score=234.16  Aligned_cols=254  Identities=20%  Similarity=0.226  Sum_probs=187.6

Q ss_pred             EecCCCCCcchhhhhc--CCCEEEEecccCCC---CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           20 FRADLTDEASFDAPIS--RSDIVFHVATPVNF---SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        20 v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ..+|++|.+++.++++  ++|+|||+|+..+.   ...++. ++++.|+.++.+++++|++.+ +++|||+||.. +|+.
T Consensus        31 ~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~-~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~-vyg~  107 (306)
T PLN02725         31 KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPA-DFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSC-IYPK  107 (306)
T ss_pred             ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchhhhCcH-HHHHHHhHHHHHHHHHHHHcC-CCeEEEeCcee-ecCC
Confidence            4689999999999887  58999999997542   223455 788999999999999999998 99999999997 5654


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCc-hhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC--CCccHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTW-GYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD--IPSSVALAA  171 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~-~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~  171 (293)
                      ...   .+++|+++...     +..|.+ .|+.+|..+|++++.+.+..+++++++||+++||++....  ....+..++
T Consensus       108 ~~~---~~~~E~~~~~~-----~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i  179 (306)
T PLN02725        108 FAP---QPIPETALLTG-----PPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALI  179 (306)
T ss_pred             CCC---CCCCHHHhccC-----CCCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHH
Confidence            322   56788763221     233444 5999999999999998888899999999999999985421  112233222


Q ss_pred             H----H-HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCC
Q 035985          172 T----L-ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVP  245 (293)
Q Consensus       172 ~----~-~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~  245 (293)
                      .    . ..+.+..+...+|    +..++|+|++|++++++.+++.....+.||+ +++.+|+.|+++.+++.++. +..
T Consensus       180 ~~~~~~~~~~~~~~~~~~~g----~~~~~~i~v~Dv~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~-~~~  254 (306)
T PLN02725        180 RRFHEAKANGAPEVVVWGSG----SPLREFLHVDDLADAVVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGF-EGE  254 (306)
T ss_pred             HHHHHHhhcCCCeEEEcCCC----CeeeccccHHHHHHHHHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCC-CCc
Confidence            2    2 2343333312222    3368999999999999999987655567877 56899999999999999873 222


Q ss_pred             CCCC-CCCcc-cccccchHHHHhcCCccccCHHHHHHHHHHHHHHc
Q 035985          246 TDFG-DFPSE-AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       246 ~~~~-~~~~~-~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      .... ..+.. ....+|++|++++||+|+++++++|+++++|++++
T Consensus       255 ~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~  300 (306)
T PLN02725        255 LVWDTSKPDGTPRKLMDSSKLRSLGWDPKFSLKDGLQETYKWYLEN  300 (306)
T ss_pred             eeecCCCCCcccccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence            2111 11111 45678999998899999999999999999999875

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=1.1e-32  Score=230.96  Aligned_cols=231  Identities=18%  Similarity=0.143  Sum_probs=171.5

Q ss_pred             CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhc
Q 035985           36 RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLS  115 (293)
Q Consensus        36 ~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  115 (293)
                      ++|+|||+|+..+....++. .+++.|+.++.+|+++|++.+ + +|||+||.+ +|+....   .+++|+.        
T Consensus        68 ~~d~Vih~A~~~~~~~~~~~-~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~-vyg~~~~---~~~~E~~--------  132 (308)
T PRK11150         68 DIEAIFHEGACSSTTEWDGK-YMMDNNYQYSKELLHYCLERE-I-PFLYASSAA-TYGGRTD---DFIEERE--------  132 (308)
T ss_pred             CccEEEECceecCCcCCChH-HHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchH-HhCcCCC---CCCccCC--------
Confidence            68999999986543322344 678999999999999999988 6 699999997 5654322   3466665        


Q ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC--CccHHHHH-HHHhCCcccccccccccccCC
Q 035985          116 SEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI--PSSVALAA-TLITGNDFLLNGLKGMQMLSG  192 (293)
Q Consensus       116 ~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~  192 (293)
                       +..|.+.|+.+|..+|++++.++.+++++++++||+++||++..+..  ......+. ....+....+...++    +.
T Consensus       133 -~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~----~~  207 (308)
T PRK11150        133 -YEKPLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSE----NF  207 (308)
T ss_pred             -CCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCC----ce
Confidence             56778899999999999999998888999999999999999865431  22233333 333454443332221    33


Q ss_pred             CCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCC-CCCCCcc---cccccchHHHHhc
Q 035985          193 SISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTD-FGDFPSE---AKLILSSEKLISE  267 (293)
Q Consensus       193 ~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~---~~~~~d~~k~~~l  267 (293)
                      .++|+|++|+|++++.+++.. .+++||+ +++.+|+.|+++.+.+.++..++... .+.....   .....|++|++++
T Consensus       208 ~r~~i~v~D~a~a~~~~~~~~-~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  286 (308)
T PRK11150        208 KRDFVYVGDVAAVNLWFWENG-VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLKGRYQAFTQADLTKLRAA  286 (308)
T ss_pred             eeeeeeHHHHHHHHHHHHhcC-CCCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccccccccceecccCHHHHHhc
Confidence            699999999999999988865 4578977 67789999999999999874222211 1111111   3346899999999


Q ss_pred             CCcccc-CHHHHHHHHHHHHH
Q 035985          268 GFCFKY-GIEDIYDQTVEYLK  287 (293)
Q Consensus       268 G~~~~~-~~~~~i~~~i~~~~  287 (293)
                      ||+|+. +++++|+++++|+.
T Consensus       287 g~~p~~~~~~~gl~~~~~~~~  307 (308)
T PRK11150        287 GYDKPFKTVAEGVAEYMAWLN  307 (308)
T ss_pred             CCCCCCCCHHHHHHHHHHHhh
Confidence            999975 99999999999985

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=3.1e-32  Score=232.56  Aligned_cols=256  Identities=22%  Similarity=0.285  Sum_probs=192.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      .+++++.+|++|++.+.++++  ++|+|||+|+....  ...++. ..++.|+.++.+++++|++.+ +++||++||.+ 
T Consensus        58 ~~~~~~~~D~~~~~~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~-  134 (352)
T PLN02240         58 DNLVFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPL-LYYDNNLVGTINLLEVMAKHG-CKKLVFSSSAT-  134 (352)
T ss_pred             ccceEEecCcCCHHHHHHHHHhCCCCEEEEccccCCccccccCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHH-
Confidence            368899999999999998886  68999999987532  222444 789999999999999999988 89999999986 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-CCceEEEEccCCccCCCCCC------C-
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-NNIDLITVIPSLMSGPSLTP------D-  162 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~------~-  162 (293)
                      +|+....   .+++|+.         +..|.+.|+.+|..+|++++.++.. .+++++++|++++||++...      . 
T Consensus       135 vyg~~~~---~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~  202 (352)
T PLN02240        135 VYGQPEE---VPCTEEF---------PLSATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKG  202 (352)
T ss_pred             HhCCCCC---CCCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCC
Confidence            6654322   5688887         6677889999999999999988755 47899999999999975421      1 


Q ss_pred             CC-ccHHHHHHHHhCCcccc--cc-----cccccccCCCCcceeHHhHHHHHHHhhccC----CC-CCcEEE-eccCCCH
Q 035985          163 IP-SSVALAATLITGNDFLL--NG-----LKGMQMLSGSISISHVEDVCRAHIFLAEKE----SA-SGRYIC-CAVNTSV  228 (293)
Q Consensus       163 ~~-~~~~~~~~~~~~~~~~~--~~-----~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~----~~-~~~y~~-~~~~~t~  228 (293)
                      .+ .++..+.....+....+  .+     .+|    ...++|+|++|+|++++.++...    .. +++||+ +++.+|+
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g----~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~  278 (352)
T PLN02240        203 IPNNLMPYVQQVAVGRRPELTVFGNDYPTKDG----TGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSV  278 (352)
T ss_pred             CcchHHHHHHHHHhCCCCceEEeCCCCCCCCC----CEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeH
Confidence            11 12333344444443222  21     122    33699999999999998887542    23 358977 6889999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCC-CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcC
Q 035985          229 PELAKFLNKRFPEYKVPTDFGD-FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       229 ~e~~~~i~~~~~~~~~~~~~~~-~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      +|+++.+.+.+|. +.+....+ .+.. ..+..|++|+++ |||+|+++++++|+++++|+++++
T Consensus       279 ~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~  342 (352)
T PLN02240        279 LEMVAAFEKASGK-KIPLKLAPRRPGDAEEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNP  342 (352)
T ss_pred             HHHHHHHHHHhCC-CCCceeCCCCCCChhhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCc
Confidence            9999999999874 33333222 2222 455679999997 999999999999999999999875

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=1.3e-31  Score=226.57  Aligned_cols=256  Identities=25%  Similarity=0.354  Sum_probs=192.8

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccc
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINA   95 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~   95 (293)
                      +++++.+|++|.+.+.++++++|+|||+|+.......++. ..++.|+.++.++++++++.+ +++||++||.+ +|+..
T Consensus        44 ~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~-~~~~~  120 (328)
T TIGR03466        44 DVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAPDPE-EMYAANVEGTRNLLRAALEAG-VERVVYTSSVA-TLGVR  120 (328)
T ss_pred             CceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCCCHH-HHHHHHHHHHHHHHHHHHHhC-CCeEEEEechh-hcCcC
Confidence            6889999999999999999999999999986543334455 788999999999999999988 89999999987 55432


Q ss_pred             cCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHHh
Q 035985           96 QNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLIT  175 (293)
Q Consensus        96 ~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~  175 (293)
                      ...  .+++|+.+..      +..+.+.|+.+|..+|++++.++.+++++++++||+++||++...... ....+.....
T Consensus       121 ~~~--~~~~e~~~~~------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~-~~~~~~~~~~  191 (328)
T TIGR03466       121 GDG--TPADETTPSS------LDDMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTP-TGRIIVDFLN  191 (328)
T ss_pred             CCC--CCcCccCCCC------cccccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCc-HHHHHHHHHc
Confidence            222  4677776211      112246899999999999999988889999999999999998643211 1122233333


Q ss_pred             CCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCC------
Q 035985          176 GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFG------  249 (293)
Q Consensus       176 ~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~------  249 (293)
                      +... ...       +...+|+|++|+|++++.+++++..+..|+++++.+|++|+++.+.+.+|........+      
T Consensus       192 ~~~~-~~~-------~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~  263 (328)
T TIGR03466       192 GKMP-AYV-------DTGLNLVHVDDVAEGHLLALERGRIGERYILGGENLTLKQILDKLAEITGRPAPRVKLPRWLLLP  263 (328)
T ss_pred             CCCc-eee-------CCCcceEEHHHHHHHHHHHHhCCCCCceEEecCCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHH
Confidence            3222 111       22478999999999999999876555578888889999999999999988432111111      


Q ss_pred             -------------CCCc---------ccccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcCCC
Q 035985          250 -------------DFPS---------EAKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKGML  292 (293)
Q Consensus       250 -------------~~~~---------~~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~~~  292 (293)
                                   ..+.         .....+|++|+++ |||+|. +++++|+++++|++++|++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~~~  328 (328)
T TIGR03466       264 VAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRANGYL  328 (328)
T ss_pred             HHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhCCC
Confidence                         0110         0245789999997 999996 9999999999999999875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=2.3e-31  Score=226.01  Aligned_cols=254  Identities=19%  Similarity=0.224  Sum_probs=189.6

Q ss_pred             CeEEEecCCCCCcchhhhhc--CCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           16 ELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      ++.++.+|++|++.+.++++  ++|+|||+|+....  ....+. +.+..|+.++.++++++++.+ +++||++||.+ +
T Consensus        51 ~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~-~  127 (338)
T PRK10675         51 HPTFVEGDIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPL-EYYDNNVNGTLRLISAMRAAN-VKNLIFSSSAT-V  127 (338)
T ss_pred             CceEEEccCCCHHHHHHHHhcCCCCEEEECCccccccchhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHH-h
Confidence            57788999999999998886  69999999987542  122344 778999999999999999998 89999999987 5


Q ss_pred             cccccCCCCccccCCCCCchhhhccCC-CCCchhHHHHHHHHHHHHHHHHhC-CceEEEEccCCccCCCCCCC-------
Q 035985           92 SINAQNVTGLVMDEKNWTDVEFLSSEK-PPTWGYAASKTLAERAACKFAQEN-NIDLITVIPSLMSGPSLTPD-------  162 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~~~~~~~~~~~~~-~p~~~Y~~~K~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~-------  162 (293)
                      |+....   .+++|++         +. .|.+.|+.+|..+|++++.+++.. +++++++|++++||+.....       
T Consensus       128 yg~~~~---~~~~E~~---------~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~  195 (338)
T PRK10675        128 YGDQPK---IPYVESF---------PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQG  195 (338)
T ss_pred             hCCCCC---Ccccccc---------CCCCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCC
Confidence            554321   4678886         33 567899999999999999987654 79999999999999753211       


Q ss_pred             C-CccHHHHHHHHhCCccc--ccc-----cccccccCCCCcceeHHhHHHHHHHhhccC--CC-CCcEEE-eccCCCHHH
Q 035985          163 I-PSSVALAATLITGNDFL--LNG-----LKGMQMLSGSISISHVEDVCRAHIFLAEKE--SA-SGRYIC-CAVNTSVPE  230 (293)
Q Consensus       163 ~-~~~~~~~~~~~~~~~~~--~~~-----~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~--~~-~~~y~~-~~~~~t~~e  230 (293)
                      . ..++..+.+...+....  +.+     .+|    .+.++|+|++|+|++++.+++..  .. +++||+ +++.+|++|
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e  271 (338)
T PRK10675        196 IPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDG----TGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLD  271 (338)
T ss_pred             ChhHHHHHHHHHHhcCCCceEEeCCcCCCCCC----cEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHH
Confidence            0 11234444444443322  211     122    23699999999999999998752  22 358977 678899999


Q ss_pred             HHHHHHHhCCCCCCCCCCCC-CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          231 LAKFLNKRFPEYKVPTDFGD-FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       231 ~~~~i~~~~~~~~~~~~~~~-~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +++.+.+.+|. +++....+ .+.. ....+|++|+++ +||+|+++++++|+++++|++++
T Consensus       272 ~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~  332 (338)
T PRK10675        272 VVNAFSKACGK-PVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_pred             HHHHHHHHhCC-CCCeeeCCCCCCchhhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence            99999999984 33332221 1222 556789999997 99999999999999999999874

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.98  E-value=1e-30  Score=219.76  Aligned_cols=252  Identities=17%  Similarity=0.134  Sum_probs=183.7

Q ss_pred             EEEecCCCCCcchhhhhc----CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcc
Q 035985           18 KIFRADLTDEASFDAPIS----RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSI   93 (293)
Q Consensus        18 ~~v~~Dl~d~~~~~~~~~----~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~   93 (293)
                      ..+.+|+.+.+.++.+.+    ++|+|||+|+.......++. ..++.|+.++.+++++|++.+ + +||++||.+ +|+
T Consensus        44 ~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~-~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~-vy~  119 (314)
T TIGR02197        44 LVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTETDGE-YMMENNYQYSKRLLDWCAEKG-I-PFIYASSAA-TYG  119 (314)
T ss_pred             eeeeccCcchhHHHHHHhhccCCCCEEEECccccCccccchH-HHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHH-hcC
Confidence            346678888877776653    79999999997654444555 778999999999999999988 5 799999987 665


Q ss_pred             cccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH--hCCceEEEEccCCccCCCCCCCC--CccHHH
Q 035985           94 NAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ--ENNIDLITVIPSLMSGPSLTPDI--PSSVAL  169 (293)
Q Consensus        94 ~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~--~~~~~~~ilR~~~v~G~~~~~~~--~~~~~~  169 (293)
                      ...    .+++|+++        +..|.+.|+.+|..+|.+++++..  ..+++++++|++++||++.....  ...+..
T Consensus       120 ~~~----~~~~e~~~--------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~  187 (314)
T TIGR02197       120 DGE----AGFREGRE--------LERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFH  187 (314)
T ss_pred             CCC----CCcccccC--------cCCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHH
Confidence            432    34556541        235788999999999999987543  23579999999999999865321  223333


Q ss_pred             H-HHHHhCCcccccccc-cccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCC
Q 035985          170 A-ATLITGNDFLLNGLK-GMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPT  246 (293)
Q Consensus       170 ~-~~~~~~~~~~~~~~~-g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~  246 (293)
                      + .....+....+.... ...+++..++|+|++|+++++..++.. ..+++||+ +++++|++|+++.+.+.+|... ..
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~-~~  265 (314)
T TIGR02197       188 LFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDE-KI  265 (314)
T ss_pred             HHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCC-cc
Confidence            3 344455554443211 000113468999999999999999987 45679977 6689999999999999988422 11


Q ss_pred             CCCCCCcc------cccccchHHHHh-cCCccccCHHHHHHHHHHHHH
Q 035985          247 DFGDFPSE------AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLK  287 (293)
Q Consensus       247 ~~~~~~~~------~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~  287 (293)
                      .+...+..      ....+|++|+++ +||+|+++++++++++++|+.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~  313 (314)
T TIGR02197       266 EYIPMPEALRGKYQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLL  313 (314)
T ss_pred             eeccCccccccccccccccchHHHHHhcCCCCcccHHHHHHHHHHHHh
Confidence            21111111      345689999998 899999999999999999985

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.98  E-value=3.4e-31  Score=210.27  Aligned_cols=259  Identities=20%  Similarity=0.215  Sum_probs=203.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      .++.++++|++|.+.++++|+  .+|.|+|+|+...  .+..+|. .++..|+.|+.++++.+++++ ++.+|+.||+. 
T Consensus        54 ~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~Hfa~~~~vgeS~~~p~-~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssat-  130 (343)
T KOG1371|consen   54 KSVFFVEGDLNDAEALEKLFSEVKFDAVMHFAALAAVGESMENPL-SYYHNNIAGTLNLLEVMKAHN-VKALVFSSSAT-  130 (343)
T ss_pred             CceEEEEeccCCHHHHHHHHhhcCCceEEeehhhhccchhhhCch-hheehhhhhHHHHHHHHHHcC-CceEEEeccee-
Confidence            579999999999999999997  6899999999764  6677888 999999999999999999999 99999999987 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCC-CCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccC--CCCCCCCC---
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKP-PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSG--PSLTPDIP---  164 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~-p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G--~~~~~~~~---  164 (293)
                      +|+.+..   .|++|+.         +.. |.++|+.+|...|..+.......++.++.||.++++|  |.......   
T Consensus       131 vYG~p~~---ip~te~~---------~t~~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~  198 (343)
T KOG1371|consen  131 VYGLPTK---VPITEED---------PTDQPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLG  198 (343)
T ss_pred             eecCcce---eeccCcC---------CCCCCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCcc
Confidence            7776654   6899998         455 8999999999999999999998899999999999999  43332221   


Q ss_pred             ---ccHHHHHHHHhCCccccc--ccc-cccccCCCCcceeHHhHHHHHHHhhccCCC---CCcEEE-eccCCCHHHHHHH
Q 035985          165 ---SSVALAATLITGNDFLLN--GLK-GMQMLSGSISISHVEDVCRAHIFLAEKESA---SGRYIC-CAVNTSVPELAKF  234 (293)
Q Consensus       165 ---~~~~~~~~~~~~~~~~~~--~~~-g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~---~~~y~~-~~~~~t~~e~~~~  234 (293)
                         ..++.......+....+.  +.+ -+-+++..++++|+-|+|+..+.++.....   .++||. ++...++.+|+.+
T Consensus       199 ~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a  278 (343)
T KOG1371|consen  199 IPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTA  278 (343)
T ss_pred             CcccccccccchhhcccccceeecCcccccCCCeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHH
Confidence               111111122222221111  111 011224479999999999999999987653   348865 7889999999999


Q ss_pred             HHHhCCCCCCCCCCCCCCcc--cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          235 LNKRFPEYKVPTDFGDFPSE--AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       235 i~~~~~~~~~~~~~~~~~~~--~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      ++++.|. ++|..+.....+  ...+.+.+++.+ |||+|.++++++++++++|...+
T Consensus       279 ~~k~~g~-~~k~~~v~~R~gdv~~~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~~n  335 (343)
T KOG1371|consen  279 FEKALGV-KIKKKVVPRRNGDVAFVYANPSKAQRELGWKAKYGLQEMLKDLWRWQKQN  335 (343)
T ss_pred             HHHHhcC-CCCccccCCCCCCceeeeeChHHHHHHhCCccccCHHHHHHHHHHHHhcC
Confidence            9999984 556554443333  778888888886 99999999999999999999876

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.98  E-value=1.9e-30  Score=218.18  Aligned_cols=256  Identities=24%  Similarity=0.299  Sum_probs=196.4

Q ss_pred             CeEEEecCCCCCcchhhhhcCC-CEEEEecccCCCCCC---CccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           16 ELKIFRADLTDEASFDAPISRS-DIVFHVATPVNFSSD---DPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~-d~Vih~a~~~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      ++.++.+|++|.+...+++.++ |+|||+|+.......   ++. .++..|+.++.+++++|++.+ +++|||+||.+.+
T Consensus        43 ~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~~~~~~~~-~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~  120 (314)
T COG0451          43 GVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPA-EFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVV  120 (314)
T ss_pred             ccceeeecccchHHHHHHHhcCCCEEEEccccCchhhhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceE
Confidence            5788999999998888888888 999999998763322   223 589999999999999999977 9999998887645


Q ss_pred             cccccCCCCccccCC-CCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCc-cHHH
Q 035985           92 SINAQNVTGLVMDEK-NWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPS-SVAL  169 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~-~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~-~~~~  169 (293)
                      ++. ...  .+++|+ .         +..|.+.|+.+|..+|+.++.+...++++++++||+++|||+..+..+. .+..
T Consensus       121 ~~~-~~~--~~~~E~~~---------~~~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~  188 (314)
T COG0451         121 YGD-PPP--LPIDEDLG---------PPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSA  188 (314)
T ss_pred             CCC-CCC--CCcccccC---------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHH
Confidence            544 222  467787 3         5667779999999999999999987799999999999999998876433 3333


Q ss_pred             HH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEe-cc-CCCHHHHHHHHHHhCCCCCCCC
Q 035985          170 AA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICC-AV-NTSVPELAKFLNKRFPEYKVPT  246 (293)
Q Consensus       170 ~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~-~~-~~t~~e~~~~i~~~~~~~~~~~  246 (293)
                      ++ ....+.+......+|    ...++|+|++|++++++++++++... +||++ +. ..+++|+++.+++.+|......
T Consensus       189 ~~~~~~~~~~~~~~~~~~----~~~~~~i~v~D~a~~~~~~~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~  263 (314)
T COG0451         189 FIRQLLKGEPIIVIGGDG----SQTRDFVYVDDVADALLLALENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPLI  263 (314)
T ss_pred             HHHHHHhCCCcceEeCCC----ceeEeeEeHHHHHHHHHHHHhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcce
Confidence            22 344455422222221    22479999999999999999988776 88775 44 7999999999999988532211


Q ss_pred             CCCC---CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcC
Q 035985          247 DFGD---FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       247 ~~~~---~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      ...+   .... .....|.+|+++ |||+|++++++++.++++|+....
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~  312 (314)
T COG0451         264 VYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL  312 (314)
T ss_pred             eecCCCCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence            1111   1111 677899999996 999999999999999999998764

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.97  E-value=1.2e-29  Score=214.68  Aligned_cols=258  Identities=22%  Similarity=0.271  Sum_probs=189.8

Q ss_pred             CeEEEecCCCCCcchhhhhc--CCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           16 ELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      +++++.+|+++++.+.++++  ++|+|||+|+.....  ..++. ..+..|+.++.++++++.+.+ +++||++||.+ +
T Consensus        48 ~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~-~  124 (328)
T TIGR01179        48 RVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQDPL-KYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAA-V  124 (328)
T ss_pred             ceEEEECCCCCHHHHHHHHHhCCCcEEEECccccCcchhhcCch-hhhhhhHHHHHHHHHHHHhcC-CCEEEEecchh-h
Confidence            57789999999999999886  699999999975322  22344 678899999999999999988 89999999986 5


Q ss_pred             cccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-CCceEEEEccCCccCCCCCCC-------C
Q 035985           92 SINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-NNIDLITVIPSLMSGPSLTPD-------I  163 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~-------~  163 (293)
                      |+....   .+++|++         +..|.+.|+.+|..+|.+++.++++ .+++++++||+.+||+.....       .
T Consensus       125 ~g~~~~---~~~~e~~---------~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~  192 (328)
T TIGR01179       125 YGEPSS---IPISEDS---------PLGPINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGI  192 (328)
T ss_pred             cCCCCC---CCccccC---------CCCCCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCccc
Confidence            554322   3678877         5567789999999999999998876 699999999999999864321       1


Q ss_pred             CccHHHHHHHHhCCc--ccccccc-cccccCCCCcceeHHhHHHHHHHhhccC---CCCCcEEE-eccCCCHHHHHHHHH
Q 035985          164 PSSVALAATLITGND--FLLNGLK-GMQMLSGSISISHVEDVCRAHIFLAEKE---SASGRYIC-CAVNTSVPELAKFLN  236 (293)
Q Consensus       164 ~~~~~~~~~~~~~~~--~~~~~~~-g~~~~~~~~~~v~v~D~a~~~~~~~~~~---~~~~~y~~-~~~~~t~~e~~~~i~  236 (293)
                      ...+..+.....+..  ..+.+.. -..+++..++|||++|+++++..++...   ..+++||+ +++++|++|+++.++
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~  272 (328)
T TIGR01179       193 THLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFK  272 (328)
T ss_pred             chHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHH
Confidence            123333444443222  1111100 0001133589999999999999998752   23468977 678999999999999


Q ss_pred             HhCCCCCCCCCCCC-CCcc-cccccchHHHHh-cCCccccC-HHHHHHHHHHHHHHc
Q 035985          237 KRFPEYKVPTDFGD-FPSE-AKLILSSEKLIS-EGFCFKYG-IEDIYDQTVEYLKTK  289 (293)
Q Consensus       237 ~~~~~~~~~~~~~~-~~~~-~~~~~d~~k~~~-lG~~~~~~-~~~~i~~~i~~~~~~  289 (293)
                      +.+|. +.+....+ .... .....|++|+++ |||+|+++ ++++++++++|++++
T Consensus       273 ~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~  328 (328)
T TIGR01179       273 KVSGV-DFPVELAPRRPGDPASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESRN  328 (328)
T ss_pred             HHhCC-CcceEeCCCCCccccchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence            99984 33322211 1111 445679999987 99999996 999999999999763

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.97  E-value=4.3e-30  Score=213.85  Aligned_cols=240  Identities=13%  Similarity=0.106  Sum_probs=174.6

Q ss_pred             EEecCCCCCcchhhhhc--CCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           19 IFRADLTDEASFDAPIS--RSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        19 ~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+.+|++|++.+.++++  ++|+|||||+.....  ..++. ..+..|+.++.+++++|++.+ + +|||+||.. +|+.
T Consensus        35 ~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~-~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~-Vy~~  110 (299)
T PRK09987         35 DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVDKAESEPE-FAQLLNATSVEAIAKAANEVG-A-WVVHYSTDY-VFPG  110 (299)
T ss_pred             cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcchhhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEccce-EECC
Confidence            34589999999999888  589999999986532  23344 667899999999999999998 5 799999987 5543


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      ...   .+++|++         +..|.+.|+.+|..+|++++.+.    .+++++|++++|||+..    .++..+++.+
T Consensus       111 ~~~---~p~~E~~---------~~~P~~~Yg~sK~~~E~~~~~~~----~~~~ilR~~~vyGp~~~----~~~~~~~~~~  170 (299)
T PRK09987        111 TGD---IPWQETD---------ATAPLNVYGETKLAGEKALQEHC----AKHLIFRTSWVYAGKGN----NFAKTMLRLA  170 (299)
T ss_pred             CCC---CCcCCCC---------CCCCCCHHHHHHHHHHHHHHHhC----CCEEEEecceecCCCCC----CHHHHHHHHH
Confidence            321   4688887         77889999999999999987654    35799999999999753    2445555544


Q ss_pred             h-CCcccccccc-cccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCC--CCCC----
Q 035985          175 T-GNDFLLNGLK-GMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPE--YKVP----  245 (293)
Q Consensus       175 ~-~~~~~~~~~~-g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~--~~~~----  245 (293)
                      . ++...+.+.. |.    ..+.+.+++|+++++..++......++||+ +++.+|+.|+++.|.+..+.  ...+    
T Consensus       171 ~~~~~~~v~~d~~g~----~~~~~~~~d~~~~~~~~~~~~~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i  246 (299)
T PRK09987        171 KEREELSVINDQFGA----PTGAELLADCTAHAIRVALNKPEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKL  246 (299)
T ss_pred             hcCCCeEEeCCCcCC----CCCHHHHHHHHHHHHHHhhccCCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCee
Confidence            3 4444443321 21    134566788888888888766544579976 67889999999999775331  1111    


Q ss_pred             --CC---CCCCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHH
Q 035985          246 --TD---FGDFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLK  287 (293)
Q Consensus       246 --~~---~~~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~  287 (293)
                        ..   ++..... ....+|++|+++ |||+|. +|+++|+++++-+.
T Consensus       247 ~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~-~~~~~l~~~~~~~~  294 (299)
T PRK09987        247 NAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLP-DWQVGVKRMLTELF  294 (299)
T ss_pred             eecchhhcCCCCCCCCcccCCHHHHHHHhCCCCc-cHHHHHHHHHHHHh
Confidence              11   1111111 556789999998 999986 99999999997553

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.97  E-value=4.5e-30  Score=210.33  Aligned_cols=209  Identities=25%  Similarity=0.290  Sum_probs=155.5

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccc
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINA   95 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~   95 (293)
                      ..+++++|++|++++.++++++|+|||+|+..+.....+.+.+++.|+.||++|+++|++.+ +++|||+||.+++....
T Consensus        46 ~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~  124 (280)
T PF01073_consen   46 VKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNY  124 (280)
T ss_pred             ceeEEEeccccHHHHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEecc
Confidence            34599999999999999999999999999987654333444799999999999999999998 99999999998665422


Q ss_pred             cCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH---hC--CceEEEEccCCccCCCCCCCCCccHHHH
Q 035985           96 QNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ---EN--NIDLITVIPSLMSGPSLTPDIPSSVALA  170 (293)
Q Consensus        96 ~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~---~~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~  170 (293)
                      ...+-...+|+.+.       +..+.+.|+.||.++|++++++..   +.  .+.+++|||+.||||++....    ..+
T Consensus       125 ~~~~~~~~dE~~~~-------~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~----~~~  193 (280)
T PF01073_consen  125 KGDPIINGDEDTPY-------PSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLV----PRL  193 (280)
T ss_pred             CCCCcccCCcCCcc-------cccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccccccc----chh
Confidence            22200122455422       334677999999999999999876   22  499999999999999876532    223


Q ss_pred             HHHHhCC-cccccccccccccCCCCcceeHHhHHHHHHHhhcc---C----C-CCCcEEE-eccCCC-HHHHHHHHHHhC
Q 035985          171 ATLITGN-DFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK---E----S-ASGRYIC-CAVNTS-VPELAKFLNKRF  239 (293)
Q Consensus       171 ~~~~~~~-~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~---~----~-~~~~y~~-~~~~~t-~~e~~~~i~~~~  239 (293)
                      ......+ .....+.+     ....+++|++|+|+++++++++   +    . .+..|++ +++++. +.|++..+.+.+
T Consensus       194 ~~~~~~g~~~~~~g~~-----~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~  268 (280)
T PF01073_consen  194 VKMVRSGLFLFQIGDG-----NNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEAL  268 (280)
T ss_pred             hHHHHhcccceeecCC-----CceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHC
Confidence            3333333 22222222     3468999999999999887642   2    2 3447866 678888 999999999999


Q ss_pred             CC
Q 035985          240 PE  241 (293)
Q Consensus       240 ~~  241 (293)
                      |.
T Consensus       269 G~  270 (280)
T PF01073_consen  269 GY  270 (280)
T ss_pred             CC
Confidence            84

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02686 cinnamoyl-CoA reductase

Probab=99.97  E-value=2.1e-29  Score=215.14  Aligned_cols=244  Identities=25%  Similarity=0.343  Sum_probs=178.2

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCC-CCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccc-hhcc
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSS-DDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAA-AVSI   93 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~-~~~~   93 (293)
                      +++++++|++|++.+.++++++|+|||+|+..+... ........+.|+.++.+++++|++..++++|||+||.. .+|+
T Consensus       108 ~~~~v~~Dl~d~~~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg  187 (367)
T PLN02686        108 GIWTVMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWR  187 (367)
T ss_pred             ceEEEEcCCCCHHHHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhccc
Confidence            588999999999999999999999999998764221 11111557789999999999999862399999999974 3454


Q ss_pred             ccc-CCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHH
Q 035985           94 NAQ-NVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAAT  172 (293)
Q Consensus        94 ~~~-~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~  172 (293)
                      ... ......++|+.|.....   +..|.+.|+.+|..+|++++.++++++++++++||++||||+........   +..
T Consensus       188 ~~~~~~~~~~i~E~~~~~~~~---~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~---~~~  261 (367)
T PLN02686        188 QNYPHDLPPVIDEESWSDESF---CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTA---TIA  261 (367)
T ss_pred             ccCCCCCCcccCCCCCCChhh---cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChh---HHH
Confidence            311 11013467776544321   44567789999999999999998888999999999999999865432221   223


Q ss_pred             HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC---CCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCC
Q 035985          173 LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE---SASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFG  249 (293)
Q Consensus       173 ~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~---~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~  249 (293)
                      .+.+. ..+.+       ++.++|+||+|++++++++++..   ..+++|+++++.++++|+++.+.+.+|. +.+....
T Consensus       262 ~~~g~-~~~~g-------~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~g~-~~~~~~~  332 (367)
T PLN02686        262 YLKGA-QEMLA-------DGLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQIGL-PINKIAG  332 (367)
T ss_pred             HhcCC-CccCC-------CCCcCeEEHHHHHHHHHHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHcCC-CCCcCCC
Confidence            44443 22322       33578999999999999999852   3456888888999999999999999984 2333222


Q ss_pred             C-C-Ccc-cccccchHHHHh-cCCccccC
Q 035985          250 D-F-PSE-AKLILSSEKLIS-EGFCFKYG  274 (293)
Q Consensus       250 ~-~-~~~-~~~~~d~~k~~~-lG~~~~~~  274 (293)
                      . . +.+ ..+..|++|+++ |||+|+..
T Consensus       333 ~~~~~~d~~~~~~d~~kl~~~l~~~~~~~  361 (367)
T PLN02686        333 NSSSDDTPARFELSNKKLSRLMSRTRRCC  361 (367)
T ss_pred             chhhcCCcccccccHHHHHHHHHHhhhcc
Confidence            2 2 222 677889999998 99999743

>PLN02583 cinnamoyl-CoA reductase

Probab=99.97  E-value=9.9e-29  Score=205.56  Aligned_cols=237  Identities=25%  Similarity=0.337  Sum_probs=175.5

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc-c
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS-I   93 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~-~   93 (293)
                      .+++++++|++|.+.+.+++.++|.|+|+++.......+.. ++++.|+.++.+++++|.+...+++||++||..+++ +
T Consensus        57 ~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~~~~~~~~~~~~~-~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~  135 (297)
T PLN02583         57 ERLKVFDVDPLDYHSILDALKGCSGLFCCFDPPSDYPSYDE-KMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWR  135 (297)
T ss_pred             CceEEEEecCCCHHHHHHHHcCCCEEEEeCccCCcccccHH-HHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecc
Confidence            36899999999999999999999999998865543222234 789999999999999998873389999999987543 2


Q ss_pred             cccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           94 NAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        94 ~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                      ........+++|++|.+..+.   ..+...|+.+|..+|++++.++++.+++++++||++||||+.....    .    .
T Consensus       136 ~~~~~~~~~~~E~~~~~~~~~---~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~----~----~  204 (297)
T PLN02583        136 DDNISTQKDVDERSWSDQNFC---RKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN----P----Y  204 (297)
T ss_pred             cccCCCCCCCCcccCCCHHHH---hhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch----h----h
Confidence            111111246788876543321   1223479999999999999998877999999999999999764321    1    1


Q ss_pred             HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCC-HHHHHHHHHHhCCCCCCCCCCCCC-
Q 035985          174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTS-VPELAKFLNKRFPEYKVPTDFGDF-  251 (293)
Q Consensus       174 ~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t-~~e~~~~i~~~~~~~~~~~~~~~~-  251 (293)
                      +.+... ...       ++.++||||+|+|++++++++.+..+++|++.+...+ +.++++++.+.+|..+++..+.+. 
T Consensus       205 ~~~~~~-~~~-------~~~~~~v~V~Dva~a~~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  276 (297)
T PLN02583        205 LKGAAQ-MYE-------NGVLVTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPYEMQG  276 (297)
T ss_pred             hcCCcc-cCc-------ccCcceEEHHHHHHHHHHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCCcccccC
Confidence            122211 111       2357899999999999999998877789988776655 678999999999987666543221 


Q ss_pred             CcccccccchHHHHhcCCcc
Q 035985          252 PSEAKLILSSEKLISEGFCF  271 (293)
Q Consensus       252 ~~~~~~~~d~~k~~~lG~~~  271 (293)
                      +......++++|+++||++.
T Consensus       277 ~~~~~~~~~~~k~~~l~~~~  296 (297)
T PLN02583        277 SEVYQQRIRNKKLNKLMEDF  296 (297)
T ss_pred             CCccccccChHHHHHhCccc
Confidence            22255678999999999864

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.97  E-value=1.9e-29  Score=212.20  Aligned_cols=224  Identities=18%  Similarity=0.166  Sum_probs=171.0

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++.+|++|++.+.++++++|+|||+||....  ...++. ++++.|+.++.++++++++.+ +++||++||..   
T Consensus        53 ~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~-~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~---  127 (324)
T TIGR03589        53 PCLRFFIGDVRDKERLTRALRGVDYVVHAAALKQVPAAEYNPF-ECIRTNINGAQNVIDAAIDNG-VKRVVALSTDK---  127 (324)
T ss_pred             CcEEEEEccCCCHHHHHHHHhcCCEEEECcccCCCchhhcCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCC---
Confidence            46899999999999999999999999999997532  223344 789999999999999999988 89999999853   


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH---hCCceEEEEccCCccCCCCCCCCCccHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ---ENNIDLITVIPSLMSGPSLTPDIPSSVAL  169 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~~~~~~~~~  169 (293)
                                              +..|.++|+.+|..+|.+++.++.   ..|++++++||+++|||+.     ..+..
T Consensus       128 ------------------------~~~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-----~~i~~  178 (324)
T TIGR03589       128 ------------------------AANPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG-----SVVPF  178 (324)
T ss_pred             ------------------------CCCCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC-----CcHHH
Confidence                                    123456899999999999987543   4589999999999999863     24555


Q ss_pred             HHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCC
Q 035985          170 AATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFG  249 (293)
Q Consensus       170 ~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~  249 (293)
                      +......+...+...+|    +..++|+|++|++++++.+++....+.+|++++..+++.|+++.+.+..+....+.   
T Consensus       179 ~~~~~~~~~~~~~i~~~----~~~r~~i~v~D~a~a~~~al~~~~~~~~~~~~~~~~sv~el~~~i~~~~~~~~~~~---  251 (324)
T TIGR03589       179 FKSLKEEGVTELPITDP----RMTRFWITLEQGVNFVLKSLERMLGGEIFVPKIPSMKITDLAEAMAPECPHKIVGI---  251 (324)
T ss_pred             HHHHHHhCCCCeeeCCC----CceEeeEEHHHHHHHHHHHHhhCCCCCEEccCCCcEEHHHHHHHHHhhCCeeEeCC---
Confidence            55555433312222232    33689999999999999999875444577767778999999999998754221111   


Q ss_pred             CCCcc--cccccchHHHHh-cCCccccCHHHHHH
Q 035985          250 DFPSE--AKLILSSEKLIS-EGFCFKYGIEDIYD  280 (293)
Q Consensus       250 ~~~~~--~~~~~d~~k~~~-lG~~~~~~~~~~i~  280 (293)
                       .+..  .....|.+|+++ |||+|++++++++.
T Consensus       252 -~~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~  284 (324)
T TIGR03589       252 -RPGEKLHEVMITEDDARHTYELGDYYAILPSIS  284 (324)
T ss_pred             -CCCchhHhhhcChhhhhhhcCCCCeEEEccccc
Confidence             1111  335689999987 99999999998875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.96  E-value=9.1e-28  Score=199.35  Aligned_cols=233  Identities=18%  Similarity=0.156  Sum_probs=173.1

Q ss_pred             ecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccccc
Q 035985           21 RADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQ   96 (293)
Q Consensus        21 ~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~   96 (293)
                      .+|+.+++.+.+++++  +|+|||+|+.....  ...+. ..++.|+.++.++++++++.+ . +||++||.+ +|+...
T Consensus        33 ~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~-vy~~~~  108 (287)
T TIGR01214        33 QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDGAESDPE-KAFAVNALAPQNLARAAARHG-A-RLVHISTDY-VFDGEG  108 (287)
T ss_pred             ccCCCCHHHHHHHHHhCCCCEEEECCccccccccccCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeee-eecCCC
Confidence            3699999999999985  49999999975422  12233 678899999999999999887 4 899999987 554322


Q ss_pred             CCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHHh-
Q 035985           97 NVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLIT-  175 (293)
Q Consensus        97 ~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~-  175 (293)
                      .   .+++|++         +..|.+.|+.+|..+|+.++.+    +.+++++||+++||++...   ..+..++..+. 
T Consensus       109 ~---~~~~E~~---------~~~~~~~Y~~~K~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~  169 (287)
T TIGR01214       109 K---RPYREDD---------ATNPLNVYGQSKLAGEQAIRAA----GPNALIVRTSWLYGGGGGR---NFVRTMLRLAGR  169 (287)
T ss_pred             C---CCCCCCC---------CCCCcchhhHHHHHHHHHHHHh----CCCeEEEEeeecccCCCCC---CHHHHHHHHhhc
Confidence            1   4688887         5677889999999999988764    6799999999999998532   23333444433 


Q ss_pred             CCcccccccccccccCCCCcceeHHhHHHHHHHhhccC-CCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCC------
Q 035985          176 GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE-SASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTD------  247 (293)
Q Consensus       176 ~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~-~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~------  247 (293)
                      +++..+..       +..++++|++|+|+++..++..+ ..+++||+ +++.+|+.|+++.+.+.+|.......      
T Consensus       170 ~~~~~~~~-------~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~  242 (287)
T TIGR01214       170 GEELRVVD-------DQIGSPTYAKDLARVIAALLQRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKP  242 (287)
T ss_pred             CCCceEec-------CCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEe
Confidence            33332222       33689999999999999999876 45678976 56889999999999999985432111      


Q ss_pred             -----CCCCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHH
Q 035985          248 -----FGDFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVE  284 (293)
Q Consensus       248 -----~~~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~  284 (293)
                           +...... ....+|++|+++ |||.+ ++++++|.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~~-~~~~~~l~~~~~  285 (287)
T TIGR01214       243 ISSKEYPRPARRPAYSVLDNTKLVKTLGTPL-PHWREALRAYLQ  285 (287)
T ss_pred             ecHHHcCCCCCCCCccccchHHHHHHcCCCC-ccHHHHHHHHHh
Confidence                 1110111 446799999998 89955 599999998875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=3.5e-28  Score=182.67  Aligned_cols=253  Identities=19%  Similarity=0.188  Sum_probs=191.0

Q ss_pred             ecCCCCCcchhhhhc--CCCEEEEecccCC---CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccc
Q 035985           21 RADLTDEASFDAPIS--RSDIVFHVATPVN---FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINA   95 (293)
Q Consensus        21 ~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~   95 (293)
                      .+||++.++.+++|.  ++..|||+|+.++   .....+. +++..|+...-|++..|.++| +++++++.|++ +|+..
T Consensus        38 d~DLt~~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynl-dF~r~Nl~indNVlhsa~e~g-v~K~vsclStC-IfPdk  114 (315)
T KOG1431|consen   38 DADLTNLADTRALFESEKPTHVIHLAAMVGGLFHNNTYNL-DFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTC-IFPDK  114 (315)
T ss_pred             cccccchHHHHHHHhccCCceeeehHhhhcchhhcCCCch-HHHhhcceechhHHHHHHHhc-hhhhhhhccee-ecCCC
Confidence            479999999999996  6999999999875   2333456 889999999999999999999 99999999988 66655


Q ss_pred             cCCCCccccCCCCCchhhhccCCCCCc-hhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC--CccHHHHH-
Q 035985           96 QNVTGLVMDEKNWTDVEFLSSEKPPTW-GYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI--PSSVALAA-  171 (293)
Q Consensus        96 ~~~~~~~~~E~~~~~~~~~~~~~~p~~-~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~-  171 (293)
                      ..   .|++|.....     +++.|.+ .|+.+|.++.-.-+.+..++|..++.+-|.++|||.++...  ...++.++ 
T Consensus       115 t~---yPIdEtmvh~-----gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~  186 (315)
T KOG1431|consen  115 TS---YPIDETMVHN-----GPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIH  186 (315)
T ss_pred             CC---CCCCHHHhcc-----CCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHH
Confidence            44   4788876332     2444444 79999988887779999999999999999999999887643  23333333 


Q ss_pred             ---HHHhCCcccccccc-cccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEEecc--CCCHHHHHHHHHHhCCCCCC
Q 035985          172 ---TLITGNDFLLNGLK-GMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYICCAV--NTSVPELAKFLNKRFPEYKV  244 (293)
Q Consensus       172 ---~~~~~~~~~~~~~~-g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~~~~--~~t~~e~~~~i~~~~~~~~~  244 (293)
                         .+...+...+..++ |++    .|.|+|++|+|+++++++.+-+. ..+.+..|+  .+|++|+++++.++++- .-
T Consensus       187 r~h~ak~~gtd~~~VwGsG~P----lRqFiys~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F-~G  261 (315)
T KOG1431|consen  187 RFHEAKRNGTDELTVWGSGSP----LRQFIYSDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDF-TG  261 (315)
T ss_pred             HHHHHHhcCCceEEEecCCCh----HHHHhhHhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCC-Cc
Confidence               33333332333333 332    59999999999999999986433 334455565  89999999999999872 22


Q ss_pred             CCCCCC-CCcc-cccccchHHHHhcCCccccC-HHHHHHHHHHHHHHc
Q 035985          245 PTDFGD-FPSE-AKLILSSEKLISEGFCFKYG-IEDIYDQTVEYLKTK  289 (293)
Q Consensus       245 ~~~~~~-~~~~-~~~~~d~~k~~~lG~~~~~~-~~~~i~~~i~~~~~~  289 (293)
                      ...+.. .+.+ .....|++|++.|+|.|+.+ ++++|.++++||.++
T Consensus       262 ~l~~DttK~DGq~kKtasnsKL~sl~pd~~ft~l~~ai~~t~~Wy~~N  309 (315)
T KOG1431|consen  262 KLVWDTTKSDGQFKKTASNSKLRSLLPDFKFTPLEQAISETVQWYLDN  309 (315)
T ss_pred             eEEeeccCCCCCcccccchHHHHHhCCCcccChHHHHHHHHHHHHHHh
Confidence            222222 2222 66789999999999999995 999999999999875

>PLN00016 RNA-binding protein; Provisional

Probab=99.95  E-value=7.1e-27  Score=200.80  Aligned_cols=229  Identities=16%  Similarity=0.177  Sum_probs=165.8

Q ss_pred             CeEEEecCCCCCcchhhhh--cCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcc
Q 035985           16 ELKIFRADLTDEASFDAPI--SRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSI   93 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~--~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~   93 (293)
                      +++++.+|+.|   +.+++  .++|+|||+++.               +..++.+++++|++.+ +++|||+||.+ +|+
T Consensus       111 ~v~~v~~D~~d---~~~~~~~~~~d~Vi~~~~~---------------~~~~~~~ll~aa~~~g-vkr~V~~SS~~-vyg  170 (378)
T PLN00016        111 GVKTVWGDPAD---VKSKVAGAGFDVVYDNNGK---------------DLDEVEPVADWAKSPG-LKQFLFCSSAG-VYK  170 (378)
T ss_pred             CceEEEecHHH---HHhhhccCCccEEEeCCCC---------------CHHHHHHHHHHHHHcC-CCEEEEEccHh-hcC
Confidence            58999999988   34444  479999998652               1345788999999998 99999999997 565


Q ss_pred             cccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHH-H
Q 035985           94 NAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAA-T  172 (293)
Q Consensus        94 ~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~-~  172 (293)
                      ....   .+..|+.         +..|.+    +|..+|.+++    +.+++++++||+++||++....   ....+. .
T Consensus       171 ~~~~---~p~~E~~---------~~~p~~----sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~~~~---~~~~~~~~  227 (378)
T PLN00016        171 KSDE---PPHVEGD---------AVKPKA----GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGNNKD---CEEWFFDR  227 (378)
T ss_pred             CCCC---CCCCCCC---------cCCCcc----hHHHHHHHHH----HcCCCeEEEeceeEECCCCCCc---hHHHHHHH
Confidence            4322   3456665         333332    7999998764    3489999999999999976432   223333 3


Q ss_pred             HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC-CCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCCC
Q 035985          173 LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES-ASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFGD  250 (293)
Q Consensus       173 ~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~-~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~  250 (293)
                      ...+.+..+.+.+     ...++|+|++|+|++++.++.++. .+++|++ +++.+|++|+++.+.+.+|.......+..
T Consensus       228 ~~~~~~i~~~g~g-----~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~  302 (378)
T PLN00016        228 LVRGRPVPIPGSG-----IQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDP  302 (378)
T ss_pred             HHcCCceeecCCC-----CeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCc
Confidence            3445554444322     336899999999999999998764 3568877 56789999999999999885321010110


Q ss_pred             ----------CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcCCC
Q 035985          251 ----------FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKGML  292 (293)
Q Consensus       251 ----------~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~~~  292 (293)
                                .+.. .....|++|+++ |||+|+++++++|+++++|++.+|.+
T Consensus       303 ~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~  356 (378)
T PLN00016        303 KAVGFGAKKAFPFRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRD  356 (378)
T ss_pred             cccCccccccccccccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence                      1111 334579999998 99999999999999999999999875

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=6.4e-27  Score=181.95  Aligned_cols=257  Identities=17%  Similarity=0.143  Sum_probs=201.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCC-ccEEEEecccc
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKT-VKRVILTSSAA   89 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~   89 (293)
                      +++.++.|||+|...+.++++  ++|-|+|+|+..+  .+...|. .+.+.+..|+.+|+++.+..++ -.||...||+.
T Consensus        55 ~~l~l~~gDLtD~~~l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~-~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE  133 (345)
T COG1089          55 PRLHLHYGDLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPE-YTADVDAIGTLRLLEAIRILGEKKTRFYQASTSE  133 (345)
T ss_pred             ceeEEEeccccchHHHHHHHHhcCchhheeccccccccccccCcc-eeeeechhHHHHHHHHHHHhCCcccEEEecccHH
Confidence            568999999999999999997  6899999999875  5566787 8999999999999999998863 35888888876


Q ss_pred             hhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC--ccH
Q 035985           90 AVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP--SSV  167 (293)
Q Consensus        90 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~--~~~  167 (293)
                       .||....   .+.+|++         |..|.++|+.+|+.+..+..++.+.+|+-.|.=.++|-=+|.....+-  .+.
T Consensus       134 -~fG~v~~---~pq~E~T---------PFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt  200 (345)
T COG1089         134 -LYGLVQE---IPQKETT---------PFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKIT  200 (345)
T ss_pred             -hhcCccc---CccccCC---------CCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHH
Confidence             7775543   6889998         889999999999999999999999999998877777666664433321  122


Q ss_pred             HHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCC-C---
Q 035985          168 ALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEY-K---  243 (293)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~-~---  243 (293)
                      ..+.++..|....+..++    .+..+||-|+.|.++++.++++++.+....+++|+..|++|+++...+..|.. .   
T Consensus       201 ~ava~Ik~G~q~~l~lGN----ldAkRDWG~A~DYVe~mwlmLQq~~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g  276 (345)
T COG1089         201 RAVARIKLGLQDKLYLGN----LDAKRDWGHAKDYVEAMWLMLQQEEPDDYVIATGETHSVREFVELAFEMVGIDLEWEG  276 (345)
T ss_pred             HHHHHHHccccceEEecc----ccccccccchHHHHHHHHHHHccCCCCceEEecCceeeHHHHHHHHHHHcCceEEEee
Confidence            334566677777766655    46789999999999999999999875433377999999999999999988710 0   


Q ss_pred             --------------CCCCCCC---CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          244 --------------VPTDFGD---FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       244 --------------~~~~~~~---~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                                    ....+.+   .|.. .-...|.+|+++ |||+|+++++|.+++|+++-.+.
T Consensus       277 ~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~~  341 (345)
T COG1089         277 TGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTKAKEKLGWRPEVSLEELVREMVEADLEA  341 (345)
T ss_pred             ccccccccccccCceeEEECccccCchhhhhhcCCHHHHHHHcCCccccCHHHHHHHHHHHHHHH
Confidence                          1111111   1111 456789999996 99999999999999999976553

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.95  E-value=1.1e-27  Score=197.54  Aligned_cols=235  Identities=20%  Similarity=0.203  Sum_probs=157.3

Q ss_pred             ecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccccc
Q 035985           21 RADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQ   96 (293)
Q Consensus        21 ~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~   96 (293)
                      ..|+.|.+.+.+.++  ++|+|||||+...  ....++. ..+.+|+.++.+|+++|.+.+  .++||+||..++.|...
T Consensus        34 ~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~-~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFdG~~~  110 (286)
T PF04321_consen   34 DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPE-EAYAINVDATKNLAEACKERG--ARLIHISTDYVFDGDKG  110 (286)
T ss_dssp             CS-TTSHHHHHHHHHHH--SEEEE------HHHHHHSHH-HHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SSTS
T ss_pred             hcCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhChh-hhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEcCCcc
Confidence            578999888888887  5999999998764  2223455 889999999999999999998  59999999985544422


Q ss_pred             CCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHHhC
Q 035985           97 NVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITG  176 (293)
Q Consensus        97 ~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~  176 (293)
                          .+.+|++         ++.|.+.||++|+++|+.++...    -+.+|+|++.+||+..    ..++..+...+..
T Consensus       111 ----~~y~E~d---------~~~P~~~YG~~K~~~E~~v~~~~----~~~~IlR~~~~~g~~~----~~~~~~~~~~~~~  169 (286)
T PF04321_consen  111 ----GPYTEDD---------PPNPLNVYGRSKLEGEQAVRAAC----PNALILRTSWVYGPSG----RNFLRWLLRRLRQ  169 (286)
T ss_dssp             ----SSB-TTS-------------SSHHHHHHHHHHHHHHHH-----SSEEEEEE-SEESSSS----SSHHHHHHHHHHC
T ss_pred             ----cccccCC---------CCCCCCHHHHHHHHHHHHHHHhc----CCEEEEecceecccCC----CchhhhHHHHHhc
Confidence                5689988         88899999999999999998744    2799999999999932    2456666665544


Q ss_pred             CcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC----CCcEEE-eccCCCHHHHHHHHHHhCCCCC---CCCCC
Q 035985          177 NDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA----SGRYIC-CAVNTSVPELAKFLNKRFPEYK---VPTDF  248 (293)
Q Consensus       177 ~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~----~~~y~~-~~~~~t~~e~~~~i~~~~~~~~---~~~~~  248 (293)
                      +.. +....     +..++.+|++|+|+++..++++...    .|+|++ +++.+|+.|++..+++.++...   .+...
T Consensus       170 ~~~-i~~~~-----d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~  243 (286)
T PF04321_consen  170 GEP-IKLFD-----DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSS  243 (286)
T ss_dssp             TSE-EEEES-----SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESS
T ss_pred             CCe-eEeeC-----CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEeccc
Confidence            333 22222     4468999999999999999987643    689966 6678999999999999987433   11111


Q ss_pred             CCCCcc----cccccchHHHHh-cCCccccCHHHHHHHHHHHH
Q 035985          249 GDFPSE----AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYL  286 (293)
Q Consensus       249 ~~~~~~----~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~  286 (293)
                      .+.+..    ....+|++|+++ ||.++. +++++++++++-+
T Consensus       244 ~~~~~~~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l~~~~~~~  285 (286)
T PF04321_consen  244 SEFPRAAPRPRNTSLDCRKLKNLLGIKPP-PWREGLEELVKQY  285 (286)
T ss_dssp             TTSTTSSGS-SBE-B--HHHHHCTTS----BHHHHHHHHHHHH
T ss_pred             ccCCCCCCCCCcccccHHHHHHccCCCCc-CHHHHHHHHHHHh
Confidence            121111    567899999998 899998 9999999998754

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=3.4e-26  Score=182.33  Aligned_cols=233  Identities=21%  Similarity=0.177  Sum_probs=180.3

Q ss_pred             cCCCCCcchhhhhc--CCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccccC
Q 035985           22 ADLTDEASFDAPIS--RSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQN   97 (293)
Q Consensus        22 ~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~   97 (293)
                      .|++|++.+.++++  ++|+|||+|+.+...  ..+++ ..+.+|..++.+++++|++.|  .++||+||-+++-|... 
T Consensus        34 ~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e-~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~~~-  109 (281)
T COG1091          34 LDITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPE-LAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGEKG-  109 (281)
T ss_pred             ccccChHHHHHHHHhhCCCEEEECccccccccccCCHH-HHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCCCC-
Confidence            69999999999998  689999999998632  23344 889999999999999999999  58999999985555442 


Q ss_pred             CCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHHhCC
Q 035985           98 VTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGN  177 (293)
Q Consensus        98 ~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~  177 (293)
                         .+..|++         .+.|.+.||+||+++|..++.+.    -+.+|+|.+++||....    .++..+++....+
T Consensus       110 ---~~Y~E~D---------~~~P~nvYG~sKl~GE~~v~~~~----~~~~I~Rtswv~g~~g~----nFv~tml~la~~~  169 (281)
T COG1091         110 ---GPYKETD---------TPNPLNVYGRSKLAGEEAVRAAG----PRHLILRTSWVYGEYGN----NFVKTMLRLAKEG  169 (281)
T ss_pred             ---CCCCCCC---------CCCChhhhhHHHHHHHHHHHHhC----CCEEEEEeeeeecCCCC----CHHHHHHHHhhcC
Confidence               5788988         88999999999999999997764    56899999999998752    3444455554444


Q ss_pred             cccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEe-ccCCCHHHHHHHHHHhCCCC---CCCCCCCCCCc
Q 035985          178 DFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICC-AVNTSVPELAKFLNKRFPEY---KVPTDFGDFPS  253 (293)
Q Consensus       178 ~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~t~~e~~~~i~~~~~~~---~~~~~~~~~~~  253 (293)
                      .. +....     |...+.+++.|+|+++..++......++|+++ ....||-|++..|.+.++..   .-+....+.+.
T Consensus       170 ~~-l~vv~-----Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~  243 (281)
T COG1091         170 KE-LKVVD-----DQYGSPTYTEDLADAILELLEKEKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPT  243 (281)
T ss_pred             Cc-eEEEC-----CeeeCCccHHHHHHHHHHHHhccccCcEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCc
Confidence            33 33322     34567899999999999999988788899664 45579999999999998621   11222222222


Q ss_pred             c----cccccchHHHHh-cCCccccCHHHHHHHHHHH
Q 035985          254 E----AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEY  285 (293)
Q Consensus       254 ~----~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~  285 (293)
                      .    ....+|+.|+++ +|+.+. +|+++++.+++.
T Consensus       244 ~a~RP~~S~L~~~k~~~~~g~~~~-~w~~~l~~~~~~  279 (281)
T COG1091         244 PAKRPANSSLDTKKLEKAFGLSLP-EWREALKALLDE  279 (281)
T ss_pred             cCCCCcccccchHHHHHHhCCCCc-cHHHHHHHHHhh
Confidence            2    446789999997 899888 999999998864

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.95  E-value=6.1e-26  Score=187.13  Aligned_cols=254  Identities=21%  Similarity=0.226  Sum_probs=187.1

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ..++++++|+.|...+..+++++ .|+|+|+.....  ..++. ..++.|+.||.+++++|++.+ ++++||+||.+++.
T Consensus        55 ~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~-~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf  131 (361)
T KOG1430|consen   55 GRVTVILGDLLDANSISNAFQGA-VVVHCAASPVPDFVENDRD-LAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVF  131 (361)
T ss_pred             CceeEEecchhhhhhhhhhccCc-eEEEeccccCccccccchh-hheeecchhHHHHHHHHHHhC-CCEEEEecCceEEe
Confidence            57999999999999999999999 788887765422  23455 889999999999999999999 99999999998665


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAAT  172 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~  172 (293)
                      +... -  ..-+|+.+.       +....+.|+.||+.+|+++++.+...++..++|||+.||||++...    ...+..
T Consensus       132 ~g~~-~--~n~~E~~p~-------p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~----~~~i~~  197 (361)
T KOG1430|consen  132 GGEP-I--INGDESLPY-------PLKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRL----LPKIVE  197 (361)
T ss_pred             CCee-c--ccCCCCCCC-------ccccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccc----cHHHHH
Confidence            5432 1  233454422       3344569999999999999998865579999999999999998653    344445


Q ss_pred             HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhc-----cCCCCC-cEEE-eccCCCHHHHHHHHHHhCCCCCCC
Q 035985          173 LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAE-----KESASG-RYIC-CAVNTSVPELAKFLNKRFPEYKVP  245 (293)
Q Consensus       173 ~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~-----~~~~~~-~y~~-~~~~~t~~e~~~~i~~~~~~~~~~  245 (293)
                      +++.+........    .++..++++++.++.+.+++..     .+..+| .|++ ++.++...+++..+.+.+|. ..|
T Consensus       198 ~~~~g~~~f~~g~----~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~-~~~  272 (361)
T KOG1430|consen  198 ALKNGGFLFKIGD----GENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGY-CLP  272 (361)
T ss_pred             HHHccCceEEeec----cccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCC-CCC
Confidence            5544443333333    1446899999999999887653     233444 5655 67788777777788888873 222


Q ss_pred             ------CC---------------CC--CCCcc--------cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcC
Q 035985          246 ------TD---------------FG--DFPSE--------AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       246 ------~~---------------~~--~~~~~--------~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                            ..               +.  .....        ...+++.+|+++ |||.|..++++++.+++.|.....
T Consensus       273 ~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~  349 (361)
T KOG1430|consen  273 SSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASES  349 (361)
T ss_pred             ceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhh
Confidence                  11               11  00000        345789999997 999999999999999999987653

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.93  E-value=3.1e-26  Score=184.77  Aligned_cols=187  Identities=27%  Similarity=0.364  Sum_probs=150.9

Q ss_pred             CeEEEecCCCCCcchhhhhcC--CCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           16 ELKIFRADLTDEASFDAPISR--SDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      +++++.+|+.|.+.+.++++.  +|+|||+|+...  ....++. ..++.|+.++.+++++|++.+ +++||++||.. +
T Consensus        43 ~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~-~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~-~  119 (236)
T PF01370_consen   43 NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPESFEDPE-EIIEANVQGTRNLLEAAREAG-VKRFIFLSSAS-V  119 (236)
T ss_dssp             TEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHHHHHSHH-HHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGG-G
T ss_pred             eEEEEEeeccccccccccccccCceEEEEeeccccccccccccc-ccccccccccccccccccccc-ccccccccccc-c
Confidence            789999999999999999985  599999999753  1112344 788999999999999999999 79999999987 6


Q ss_pred             cccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCC-CCCCCCccHHHH
Q 035985           92 SINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPS-LTPDIPSSVALA  170 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~-~~~~~~~~~~~~  170 (293)
                      |+....   .+++|+.         +..|.++|+.+|..+|++++.+.++++++++++||+++|||+ ........+..+
T Consensus       120 y~~~~~---~~~~e~~---------~~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~  187 (236)
T PF01370_consen  120 YGDPDG---EPIDEDS---------PINPLSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSL  187 (236)
T ss_dssp             GTSSSS---SSBETTS---------GCCHSSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHH
T ss_pred             cccccc---ccccccc---------ccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence            665522   5788887         557888999999999999999998889999999999999999 222223445555


Q ss_pred             HHHH-hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC-CCCcEEEe
Q 035985          171 ATLI-TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES-ASGRYICC  222 (293)
Q Consensus       171 ~~~~-~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~-~~~~y~~~  222 (293)
                      +..+ .+++..+.+.+     +..++|+|++|+|++++.+++++. .+++||++
T Consensus       188 ~~~~~~~~~~~~~~~~-----~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig  236 (236)
T PF01370_consen  188 IRQALKGKPIKIPGDG-----SQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG  236 (236)
T ss_dssp             HHHHHTTSSEEEESTS-----SCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred             hHHhhcCCcccccCCC-----CCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            5444 56655555533     457999999999999999999988 67799863

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK05865 hypothetical protein; Provisional

Probab=99.93  E-value=1.4e-24  Score=198.22  Aligned_cols=210  Identities=18%  Similarity=0.210  Sum_probs=155.4

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccc
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINA   95 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~   95 (293)
                      +++++.+|++|.+.+.++++++|+|||+|+...        ..++.|+.++.++++++++.+ +++||++||..      
T Consensus        41 ~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~--------~~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~------  105 (854)
T PRK05865         41 SADFIAADIRDATAVESAMTGADVVAHCAWVRG--------RNDHINIDGTANVLKAMAETG-TGRIVFTSSGH------  105 (854)
T ss_pred             CceEEEeeCCCHHHHHHHHhCCCEEEECCCccc--------chHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH------
Confidence            588999999999999999999999999997532        246889999999999999998 89999999841      


Q ss_pred             cCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHHh
Q 035985           96 QNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLIT  175 (293)
Q Consensus        96 ~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~  175 (293)
                                                      |..+|+++.    +++++++++||+++|||+..    .+    +..+.
T Consensus       106 --------------------------------K~aaE~ll~----~~gl~~vILRp~~VYGP~~~----~~----i~~ll  141 (854)
T PRK05865        106 --------------------------------QPRVEQMLA----DCGLEWVAVRCALIFGRNVD----NW----VQRLF  141 (854)
T ss_pred             --------------------------------HHHHHHHHH----HcCCCEEEEEeceEeCCChH----HH----HHHHh
Confidence                                            667787663    35899999999999999621    11    22222


Q ss_pred             CCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC-CCCcEEE-eccCCCHHHHHHHHHHhCCCCC--CCCCCCCC
Q 035985          176 GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES-ASGRYIC-CAVNTSVPELAKFLNKRFPEYK--VPTDFGDF  251 (293)
Q Consensus       176 ~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~-~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~--~~~~~~~~  251 (293)
                      .... +..+.    .+..++|+|++|+|++++.+++... .+++||+ +++.+|++|+++.+.+......  ........
T Consensus       142 ~~~v-~~~G~----~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~  216 (854)
T PRK05865        142 ALPV-LPAGY----ADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSF  216 (854)
T ss_pred             cCce-eccCC----CCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccch
Confidence            2111 11111    0234799999999999999986543 4678976 6788999999999987532111  11111111


Q ss_pred             Cc----ccccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          252 PS----EAKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       252 ~~----~~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      ..    .....+|++|+++ |||+|+++++++|+++++|++.+
T Consensus       217 ~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r  259 (854)
T PRK05865        217 AELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR  259 (854)
T ss_pred             hhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence            00    0244689999998 99999999999999999999874

>PLN02996 fatty acyl-CoA reductase

Probab=99.93  E-value=4.7e-25  Score=194.02  Aligned_cols=215  Identities=18%  Similarity=0.203  Sum_probs=151.9

Q ss_pred             CCeEEEecCCCCC-------cchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecc
Q 035985           15 GELKIFRADLTDE-------ASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSS   87 (293)
Q Consensus        15 ~~v~~v~~Dl~d~-------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS   87 (293)
                      ++++++.||++++       +.+.++++++|+|||+|+..+.. .++. .....|+.|+.+++++|++.+.+++|||+||
T Consensus        84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~-~~~~-~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST  161 (491)
T PLN02996         84 EKVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD-ERYD-VALGINTLGALNVLNFAKKCVKVKMLLHVST  161 (491)
T ss_pred             cCEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc-CCHH-HHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence            5799999999854       34667888999999999987643 3455 7899999999999999998744899999999


Q ss_pred             cchhcccccCCCCccccCCCCC-----------ch---------------------h----------hhc-cCCCCCchh
Q 035985           88 AAAVSINAQNVTGLVMDEKNWT-----------DV---------------------E----------FLS-SEKPPTWGY  124 (293)
Q Consensus        88 ~~~~~~~~~~~~~~~~~E~~~~-----------~~---------------------~----------~~~-~~~~p~~~Y  124 (293)
                      ++ +|+....    .+.|..+.           +.                     .          ..+ ....+.+.|
T Consensus       162 ~~-vyG~~~~----~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y  236 (491)
T PLN02996        162 AY-VCGEKSG----LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTY  236 (491)
T ss_pred             eE-EecCCCc----eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCch
Confidence            98 5554321    12221111           00                     0          000 012345789


Q ss_pred             HHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccH------HHH-HHHHhCCcccccccccccccCCCCcce
Q 035985          125 AASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSV------ALA-ATLITGNDFLLNGLKGMQMLSGSISIS  197 (293)
Q Consensus       125 ~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~v  197 (293)
                      +.||..+|+++..+..  +++++++||++|||++..+. +.++      ..+ .....|....+.+.+     +..+|+|
T Consensus       237 ~~TK~~aE~lv~~~~~--~lpv~i~RP~~V~G~~~~p~-~gwi~~~~~~~~i~~~~~~g~~~~~~gdg-----~~~~D~v  308 (491)
T PLN02996        237 VFTKAMGEMLLGNFKE--NLPLVIIRPTMITSTYKEPF-PGWIEGLRTIDSVIVGYGKGKLTCFLADP-----NSVLDVI  308 (491)
T ss_pred             HhhHHHHHHHHHHhcC--CCCEEEECCCEeccCCcCCC-CCcccchhhHHHHHHHhccceEeEEecCC-----Ceeccee
Confidence            9999999999987653  89999999999999987662 2222      112 222233333333322     4579999


Q ss_pred             eHHhHHHHHHHhhccC----CCCCcEEE-ec--cCCCHHHHHHHHHHhCCCCCC
Q 035985          198 HVEDVCRAHIFLAEKE----SASGRYIC-CA--VNTSVPELAKFLNKRFPEYKV  244 (293)
Q Consensus       198 ~v~D~a~~~~~~~~~~----~~~~~y~~-~~--~~~t~~e~~~~i~~~~~~~~~  244 (293)
                      ||+|+++++++++...    ..+.+||+ ++  .++|+.++++.+.+.++..+.
T Consensus       309 ~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~  362 (491)
T PLN02996        309 PADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW  362 (491)
T ss_pred             cccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence            9999999999988753    12458977 56  689999999999998875544

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.92  E-value=4.4e-24  Score=177.70  Aligned_cols=225  Identities=17%  Similarity=0.128  Sum_probs=152.8

Q ss_pred             cchhhhhcCCCEEEEecccCCCC--C--CCccccchhHHHHHHHHHHHHHhcCCCcc--EEEEecccchhcccccCCCCc
Q 035985           28 ASFDAPISRSDIVFHVATPVNFS--S--DDPETDMIKPAIQGVVNVLKACTKTKTVK--RVILTSSAAAVSINAQNVTGL  101 (293)
Q Consensus        28 ~~~~~~~~~~d~Vih~a~~~~~~--~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~v~~SS~~~~~~~~~~~~~~  101 (293)
                      ..+.+.+.++|+|||+|+.....  .  ..+. .+++.|+.++.++++++++.+ ++  +||++||.+ +|+....   .
T Consensus        49 ~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~-~yg~~~~---~  122 (292)
T TIGR01777        49 LAESEALEGADAVINLAGEPIADKRWTEERKQ-EIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVG-YYGTSED---R  122 (292)
T ss_pred             cchhhhcCCCCEEEECCCCCcccccCCHHHHH-HHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEE-EeCCCCC---C
Confidence            34556678899999999975321  1  1122 567889999999999999987 53  566666655 5654322   4


Q ss_pred             cccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccc
Q 035985          102 VMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLL  181 (293)
Q Consensus       102 ~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  181 (293)
                      +++|+.         +..+.+.|+..+...|..+..+. +.+++++++||+.+||+...     ....+...........
T Consensus       123 ~~~E~~---------~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~ilR~~~v~G~~~~-----~~~~~~~~~~~~~~~~  187 (292)
T TIGR01777       123 VFTEED---------SPAGDDFLAELCRDWEEAAQAAE-DLGTRVVLLRTGIVLGPKGG-----ALAKMLPPFRLGLGGP  187 (292)
T ss_pred             CcCccc---------CCCCCChHHHHHHHHHHHhhhch-hcCCceEEEeeeeEECCCcc-----hhHHHHHHHhcCcccc
Confidence            677776         33455566777777777766443 45899999999999999642     1222222111111001


Q ss_pred             cccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCCCC---------
Q 035985          182 NGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFGDF---------  251 (293)
Q Consensus       182 ~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~---------  251 (293)
                      .+ +    .+..++|+|++|+|+++..+++++...++|++ +++.+|++|+++.+++.+|.. .+..++..         
T Consensus       188 ~g-~----~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~~~~~~~s~~di~~~i~~~~g~~-~~~~~p~~~~~~~~~~~  261 (292)
T TIGR01777       188 LG-S----GRQWFSWIHIEDLVQLILFALENASISGPVNATAPEPVRNKEFAKALARALHRP-AFFPVPAFVLRALLGEM  261 (292)
T ss_pred             cC-C----CCcccccEeHHHHHHHHHHHhcCcccCCceEecCCCccCHHHHHHHHHHHhCCC-CcCcCCHHHHHHHhchh
Confidence            11 1    14469999999999999999988766778976 668899999999999999842 22222111         


Q ss_pred             Ccc--cccccchHHHHhcCCcccc-CHHHHH
Q 035985          252 PSE--AKLILSSEKLISEGFCFKY-GIEDIY  279 (293)
Q Consensus       252 ~~~--~~~~~d~~k~~~lG~~~~~-~~~~~i  279 (293)
                      +..  .....+++|++++||+|++ +++|++
T Consensus       262 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  292 (292)
T TIGR01777       262 ADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL  292 (292)
T ss_pred             hHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence            111  4556788999999999999 688763

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.4e-22  Score=186.74  Aligned_cols=251  Identities=17%  Similarity=0.161  Sum_probs=172.4

Q ss_pred             CCeEEEecCCCCCc------chhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEeccc
Q 035985           15 GELKIFRADLTDEA------SFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSA   88 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~------~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~   88 (293)
                      ++++++.+|++|++      .+.++ +++|+|||+|+..+.. .... ...+.|+.++.+++++|++.+ +++|||+||.
T Consensus        51 ~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~-~~~~-~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~  126 (657)
T PRK07201         51 DRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLT-ADEE-AQRAANVDGTRNVVELAERLQ-AATFHHVSSI  126 (657)
T ss_pred             CcEEEEecccCCccCCcCHHHHHHh-cCCCEEEECceeecCC-CCHH-HHHHHHhHHHHHHHHHHHhcC-CCeEEEEecc
Confidence            47899999999963      34444 8999999999976543 2333 678899999999999999998 8999999998


Q ss_pred             chhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCc---
Q 035985           89 AAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPS---  165 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~---  165 (293)
                      . +|+...    ...+|+.+..      +..+.+.|+.+|.++|+++++   ..+++++++||++|||+........   
T Consensus       127 ~-v~g~~~----~~~~e~~~~~------~~~~~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~  192 (657)
T PRK07201        127 A-VAGDYE----GVFREDDFDE------GQGLPTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDG  192 (657)
T ss_pred             c-cccCcc----Cccccccchh------hcCCCCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCc
Confidence            7 554332    2345554211      223457899999999999864   3489999999999999875432211   


Q ss_pred             --cHHHHHHHHhCCcc--cccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEE-eccCCCHHHHHHHHHHhC
Q 035985          166 --SVALAATLITGNDF--LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYIC-CAVNTSVPELAKFLNKRF  239 (293)
Q Consensus       166 --~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~-~~~~~t~~e~~~~i~~~~  239 (293)
                        .+..++..+...+.  .+...+     .+..+++|++|+++++..++..+.. +++||+ +++++|++|+++.+++.+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~  267 (657)
T PRK07201        193 PYYFFKVLAKLAKLPSWLPMVGPD-----GGRTNIVPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAA  267 (657)
T ss_pred             HHHHHHHHHHhccCCcccccccCC-----CCeeeeeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHh
Confidence              11112222211111  111111     3468999999999999999876544 458977 568999999999999998


Q ss_pred             CCCC-------CCCCC----CC-----------------CCcc------cccccchHHHHh-c---CCccccCHHHHHHH
Q 035985          240 PEYK-------VPTDF----GD-----------------FPSE------AKLILSSEKLIS-E---GFCFKYGIEDIYDQ  281 (293)
Q Consensus       240 ~~~~-------~~~~~----~~-----------------~~~~------~~~~~d~~k~~~-l---G~~~~~~~~~~i~~  281 (293)
                      |...       +|...    ..                 ....      ....+|++++++ |   |+.+. .+++.+..
T Consensus       268 g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~  346 (657)
T PRK07201        268 GAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPR  346 (657)
T ss_pred             CCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCCHHHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHH
Confidence            7533       11110    00                 0000      234688888887 6   55555 78899999


Q ss_pred             HHHHHHHc
Q 035985          282 TVEYLKTK  289 (293)
Q Consensus       282 ~i~~~~~~  289 (293)
                      .++|+.+.
T Consensus       347 ~~~~~~~~  354 (657)
T PRK07201        347 LWDYWERH  354 (657)
T ss_pred             HHHHHHhc
Confidence            99887653

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.90  E-value=2.2e-22  Score=169.11  Aligned_cols=225  Identities=13%  Similarity=0.102  Sum_probs=159.1

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++.+|++|++++.++++++|+|||+++...   .++. .+.+.|+.++.+++++|++.+ ++|||++||.++ .. 
T Consensus        43 ~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~---~~~~-~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~-~~-  115 (317)
T CHL00194         43 WGAELVYGDLSLPETLPPSFKGVTAIIDASTSRP---SDLY-NAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNA-EQ-  115 (317)
T ss_pred             cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCC---CCcc-chhhhhHHHHHHHHHHHHHcC-CCEEEEeccccc-cc-
Confidence            4799999999999999999999999999976432   2344 678889999999999999999 999999998641 10 


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                                              .+.++|..+|..+|.+++    +.+++++++||+.+|+.....       .....+
T Consensus       116 ------------------------~~~~~~~~~K~~~e~~l~----~~~l~~tilRp~~~~~~~~~~-------~~~~~~  160 (317)
T CHL00194        116 ------------------------YPYIPLMKLKSDIEQKLK----KSGIPYTIFRLAGFFQGLISQ-------YAIPIL  160 (317)
T ss_pred             ------------------------cCCChHHHHHHHHHHHHH----HcCCCeEEEeecHHhhhhhhh-------hhhhhc
Confidence                                    012368899999998774    458999999999888632110       011222


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC-CCCcEEE-eccCCCHHHHHHHHHHhCCCC----CCCCC-
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES-ASGRYIC-CAVNTSVPELAKFLNKRFPEY----KVPTD-  247 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~-~~~~y~~-~~~~~t~~e~~~~i~~~~~~~----~~~~~-  247 (293)
                      .+.+..+ ..+     +..++|+|++|+|++++.++..+. .+++|++ +++.+|++|+++.+.+.+|+.    .+|.. 
T Consensus       161 ~~~~~~~-~~~-----~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~  234 (317)
T CHL00194        161 EKQPIWI-TNE-----STPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFL  234 (317)
T ss_pred             cCCceEe-cCC-----CCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHH
Confidence            2333222 112     346899999999999999998754 4568977 567899999999999998852    12211 


Q ss_pred             ----------C---CCCCcc----------cccccchHHHHh-cCCccc--cCHHHHHHHHHHHHH
Q 035985          248 ----------F---GDFPSE----------AKLILSSEKLIS-EGFCFK--YGIEDIYDQTVEYLK  287 (293)
Q Consensus       248 ----------~---~~~~~~----------~~~~~d~~k~~~-lG~~~~--~~~~~~i~~~i~~~~  287 (293)
                                +   +..+..          .....+.+++.+ ||+.|.  .++++.+++++.-..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~  300 (317)
T CHL00194        235 LKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERIL  300 (317)
T ss_pred             HHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHHH
Confidence                      1   000110          122345667777 899985  378888888876443

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.90  E-value=1.7e-23  Score=167.94  Aligned_cols=197  Identities=19%  Similarity=0.232  Sum_probs=143.2

Q ss_pred             EEEecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcc
Q 035985           18 KIFRADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSI   93 (293)
Q Consensus        18 ~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~   93 (293)
                      .++.||+.|.+.+.++++  ++|+|||+|+..+  ....+|. +..++|+.||.|++++|.+++ +++||++||-.+   
T Consensus        57 ~~vigDvrd~~~l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~-eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKA---  131 (293)
T PF02719_consen   57 VPVIGDVRDKERLNRIFEEYKPDIVFHAAALKHVPLMEDNPF-EAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKA---  131 (293)
T ss_dssp             E--CTSCCHHHHHHHHTT--T-SEEEE------HHHHCCCHH-HHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGC---
T ss_pred             CceeecccCHHHHHHHHhhcCCCEEEEChhcCCCChHHhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEcccccc---
Confidence            346899999999999999  8999999999876  2345676 999999999999999999999 999999999763   


Q ss_pred             cccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCCCCCCCccHHHH
Q 035985           94 NAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSLTPDIPSSVALA  170 (293)
Q Consensus        94 ~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~  170 (293)
                                              .+|.+.||.||+.+|.++..++...   +.+++++|.+||.|...     +.++.+
T Consensus       132 ------------------------v~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G-----SVip~F  182 (293)
T PF02719_consen  132 ------------------------VNPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG-----SVIPLF  182 (293)
T ss_dssp             ------------------------SS--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT-----SCHHHH
T ss_pred             ------------------------CCCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC-----cHHHHH
Confidence                                    2467899999999999999988765   68999999999999754     578888


Q ss_pred             HHHHhCC-cccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCC-----CCC
Q 035985          171 ATLITGN-DFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFP-----EYK  243 (293)
Q Consensus       171 ~~~~~~~-~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~-----~~~  243 (293)
                      .+++..+ +..+..      ++-.|-|+.++++++.++.++.....+.+|+. -|+++++.|+++.+.+..|     ...
T Consensus       183 ~~Qi~~g~PlTvT~------p~mtRffmti~EAv~Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~~~~~~~~  256 (293)
T PF02719_consen  183 KKQIKNGGPLTVTD------PDMTRFFMTIEEAVQLVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSGLEPGKKPD  256 (293)
T ss_dssp             HHHHHTTSSEEECE------TT-EEEEE-HHHHHHHHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT-EEEESSS
T ss_pred             HHHHHcCCcceeCC------CCcEEEEecHHHHHHHHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcccccccCCC
Confidence            8777544 444433      24468999999999999999987767778877 6899999999999999997     335


Q ss_pred             CCCCCCCCCcc
Q 035985          244 VPTDFGDFPSE  254 (293)
Q Consensus       244 ~~~~~~~~~~~  254 (293)
                      ++..+.+...+
T Consensus       257 i~I~~~GlRpG  267 (293)
T PF02719_consen  257 IPIKFTGLRPG  267 (293)
T ss_dssp             S-EEE----TT
T ss_pred             cceEEcCCCCC
Confidence            66665554433

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.89  E-value=1.4e-21  Score=162.33  Aligned_cols=239  Identities=14%  Similarity=0.116  Sum_probs=161.1

Q ss_pred             CeEEEecCCCCCcchhhhhc--CCCEEEEecccCCC-----CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEeccc
Q 035985           16 ELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNF-----SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSA   88 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~   88 (293)
                      .|....+|+.|.+.+...++  ++|+|||+||..+.     ...++. ++++.|+.++.+++++|++.+ +++ +++||.
T Consensus        35 ~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~-~~~~~Nv~gt~~ll~aa~~~g-v~~-v~~sS~  111 (298)
T PLN02778         35 DFHYGSGRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKV-ETIRANVVGTLTLADVCRERG-LVL-TNYATG  111 (298)
T ss_pred             EEEEecCccCCHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CCE-EEEecc
Confidence            35545678888877777776  68999999998642     123455 789999999999999999998 764 555665


Q ss_pred             chhcccccC---CCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCc
Q 035985           89 AAVSINAQN---VTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPS  165 (293)
Q Consensus        89 ~~~~~~~~~---~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~  165 (293)
                      + +|+....   ..+.+++|+++        +..|.+.|+.+|.++|.++..+.     +..++|+..++|++..     
T Consensus       112 ~-vy~~~~~~p~~~~~~~~Ee~~--------p~~~~s~Yg~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~-----  172 (298)
T PLN02778        112 C-IFEYDDAHPLGSGIGFKEEDT--------PNFTGSFYSKTKAMVEELLKNYE-----NVCTLRVRMPISSDLS-----  172 (298)
T ss_pred             e-EeCCCCCCCcccCCCCCcCCC--------CCCCCCchHHHHHHHHHHHHHhh-----ccEEeeecccCCcccc-----
Confidence            5 4432110   01134676651        33345899999999999998765     3567888777776421     


Q ss_pred             cHHHHHHHH-hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCC
Q 035985          166 SVALAATLI-TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYK  243 (293)
Q Consensus       166 ~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~  243 (293)
                      ....++..+ .+..... .         ..+|+|++|++++++.++.... +++||+ +++.+|+.|+++.+++.++...
T Consensus       173 ~~~~fi~~~~~~~~~~~-~---------~~s~~yv~D~v~al~~~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~~~~  241 (298)
T PLN02778        173 NPRNFITKITRYEKVVN-I---------PNSMTILDELLPISIEMAKRNL-TGIYNFTNPGVVSHNEILEMYRDYIDPSF  241 (298)
T ss_pred             cHHHHHHHHHcCCCeeE-c---------CCCCEEHHHHHHHHHHHHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhCCCc
Confidence            111233333 3433222 1         2579999999999999997653 479977 6789999999999999998421


Q ss_pred             --CCCCCCCCC-----cccccccchHHHHh-cCCccccCHHHHHHHHHHHHHH
Q 035985          244 --VPTDFGDFP-----SEAKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKT  288 (293)
Q Consensus       244 --~~~~~~~~~-----~~~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~  288 (293)
                        ....+.+..     ......+|++|+++ ++-.+. ..+++++..++-++.
T Consensus       242 ~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~-~~~~~~~~~~~~~~~  293 (298)
T PLN02778        242 TWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLP-IKESLIKYVFEPNKK  293 (298)
T ss_pred             eeccccHHHHHHHHhCCCccccccHHHHHHhcccccc-hHHHHHHHHHHHHHh
Confidence              111111110     01345799999998 665454 667888887776644

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.89  E-value=3.9e-22  Score=170.14  Aligned_cols=198  Identities=20%  Similarity=0.229  Sum_probs=164.5

Q ss_pred             CCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      .++.++-||+.|.+.+.+++++  +|+|||+|+..+.+  ..+|. +..++|+.||.|++++|.+++ +++||.+||-.+
T Consensus       302 ~~~~~~igdVrD~~~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~-Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKA  379 (588)
T COG1086         302 LKLRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPE-EAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKA  379 (588)
T ss_pred             cceEEEecccccHHHHHHHHhcCCCceEEEhhhhccCcchhcCHH-HHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCcc
Confidence            5788999999999999999997  99999999987633  45677 999999999999999999999 999999999764


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCCCCCCCccH
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSLTPDIPSSV  167 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~  167 (293)
                      +                           +|.|.||.||+.+|..+..+....   +.+++++|.|||.|...     +.+
T Consensus       380 V---------------------------~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG-----SVi  427 (588)
T COG1086         380 V---------------------------NPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG-----SVI  427 (588)
T ss_pred             c---------------------------CCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC-----CCH
Confidence            3                           577899999999999999997743   38999999999999764     577


Q ss_pred             HHHHHHHh-CCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCC---CC
Q 035985          168 ALAATLIT-GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFP---EY  242 (293)
Q Consensus       168 ~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~---~~  242 (293)
                      +.+.+++. |++..+..      ++-.|-|..++|.++.++.+......+.+|+. -|+++++.|+++.+-+..|   ..
T Consensus       428 PlFk~QI~~GgplTvTd------p~mtRyfMTI~EAv~LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g~~~~~  501 (588)
T COG1086         428 PLFKKQIAEGGPLTVTD------PDMTRFFMTIPEAVQLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAGQTPPG  501 (588)
T ss_pred             HHHHHHHHcCCCccccC------CCceeEEEEHHHHHHHHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhCCCCCC
Confidence            88877775 44443332      35568999999999999999988777779988 6899999999999999886   33


Q ss_pred             CCCCCCCCCC
Q 035985          243 KVPTDFGDFP  252 (293)
Q Consensus       243 ~~~~~~~~~~  252 (293)
                      .++..+.+..
T Consensus       502 dI~I~~~GlR  511 (588)
T COG1086         502 DIAIKIIGLR  511 (588)
T ss_pred             CCCeEEEecC
Confidence            4455544433

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.88  E-value=2e-20  Score=160.60  Aligned_cols=207  Identities=17%  Similarity=0.184  Sum_probs=144.3

Q ss_pred             CCeEEEecCCCCCc------chhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEeccc
Q 035985           15 GELKIFRADLTDEA------SFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSA   88 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~------~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~   88 (293)
                      ++++++.+|++++.      .+.++.+++|+|||+|+.....  .+.......|+.++.+++++|.+.+ +++||++||.
T Consensus        61 ~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~~~--~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~  137 (367)
T TIGR01746        61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWV--YPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTI  137 (367)
T ss_pred             CCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEeccC--CcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccc
Confidence            47999999998763      4566677899999999986533  2233677899999999999999988 8899999999


Q ss_pred             chhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC--cc
Q 035985           89 AAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP--SS  166 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~--~~  166 (293)
                      ++ ++....   .+..|+.....    ....+.+.|+.+|+.+|.+++.+.+. |++++++||+.+||+.......  ..
T Consensus       138 ~v-~~~~~~---~~~~~~~~~~~----~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~  208 (367)
T TIGR01746       138 SV-LAAIDL---STVTEDDAIVT----PPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDI  208 (367)
T ss_pred             cc-cCCcCC---CCccccccccc----cccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhH
Confidence            74 433211   12233331110    02234568999999999999887765 9999999999999984433211  12


Q ss_pred             HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC---CCcEEE-eccCCCHHHHHHHHHHhCC
Q 035985          167 VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA---SGRYIC-CAVNTSVPELAKFLNKRFP  240 (293)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~---~~~y~~-~~~~~t~~e~~~~i~~~~~  240 (293)
                      +..++....... .++...     ....+++|++|++++++.++..+..   +++|++ ++++++++|+++.+.+ .|
T Consensus       209 ~~~~~~~~~~~~-~~p~~~-----~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g  279 (367)
T TIGR01746       209 LWRMVKGCLALG-AYPDSP-----ELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AG  279 (367)
T ss_pred             HHHHHHHHHHhC-CCCCCC-----ccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cC
Confidence            222222211111 122211     1257899999999999999876653   568877 5689999999999998 54

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.85  E-value=7.9e-21  Score=145.22  Aligned_cols=249  Identities=19%  Similarity=0.181  Sum_probs=179.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCC--ccEEEEeccc
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKT--VKRVILTSSA   88 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~v~~SS~   88 (293)
                      ....++.||++|...+.+++.  +++-|+|+|+..+  .+..-++ -+.++...|+..|+++.+.++-  -.||-..||.
T Consensus        83 ~~mkLHYgDmTDss~L~k~I~~ikPtEiYnLaAQSHVkvSFdlpe-YTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstS  161 (376)
T KOG1372|consen   83 ASMKLHYGDMTDSSCLIKLISTIKPTEVYNLAAQSHVKVSFDLPE-YTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTS  161 (376)
T ss_pred             ceeEEeeccccchHHHHHHHhccCchhhhhhhhhcceEEEeeccc-ceeeccchhhhhHHHHHHhcCcccceeEEecccH
Confidence            458889999999999999987  6899999999875  2222344 6677788899999999887741  2378888887


Q ss_pred             chhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccH-
Q 035985           89 AAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSV-  167 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~-  167 (293)
                      . .||....   .|-+|.+         |.-|.++|+.+|..+-.++.++.+.+++-.|-   +..|.......+..++ 
T Consensus       162 E-lyGkv~e---~PQsE~T---------PFyPRSPYa~aKmy~~WivvNyREAYnmfAcN---GILFNHESPRRGenFVT  225 (376)
T KOG1372|consen  162 E-LYGKVQE---IPQSETT---------PFYPRSPYAAAKMYGYWIVVNYREAYNMFACN---GILFNHESPRRGENFVT  225 (376)
T ss_pred             h-hcccccC---CCcccCC---------CCCCCChhHHhhhhheEEEEEhHHhhcceeec---cEeecCCCCccccchhh
Confidence            5 8875543   4677887         77899999999999999999999888775552   2233332222222222 


Q ss_pred             ----HHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCC-
Q 035985          168 ----ALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEY-  242 (293)
Q Consensus       168 ----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~-  242 (293)
                          ..+.++..|....+..++    .+..+||-|+.|.++++.++|+++.+....+.+|+..|++|+.+..-...|+. 
T Consensus       226 RKItRsvakI~~gqqe~~~LGN----L~a~RDWGhA~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l  301 (376)
T KOG1372|consen  226 RKITRSVAKISLGQQEKIELGN----LSALRDWGHAGDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVL  301 (376)
T ss_pred             HHHHHHHHHhhhcceeeEEecc----hhhhcccchhHHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEE
Confidence                223344455555554443    34579999999999999999999888766688999999999999887776521 


Q ss_pred             --C---CC-----------CCCCC---CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHH
Q 035985          243 --K---VP-----------TDFGD---FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVE  284 (293)
Q Consensus       243 --~---~~-----------~~~~~---~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~  284 (293)
                        +   +.           ....+   .|.. .....|.+|+++ |||+|+.++.+.+++|+.
T Consensus       302 ~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGdasKAk~~LgW~pkv~f~eLVkeMv~  364 (376)
T KOG1372|consen  302 NWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDASKAKKTLGWKPKVTFPELVKEMVA  364 (376)
T ss_pred             eecccccccccccCCceEEEEecccccCcchhhhhcCChHHHHHhhCCCCccCHHHHHHHHHH
Confidence              0   00           00000   1111 556789999998 999999999999999875

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.84  E-value=1.5e-20  Score=152.40  Aligned_cols=179  Identities=24%  Similarity=0.318  Sum_probs=103.4

Q ss_pred             CCeEEEecCCCCCc------chhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEeccc
Q 035985           15 GELKIFRADLTDEA------SFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSA   88 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~------~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~   88 (293)
                      .+++++.||++++.      .+.++.+++|+|||+|+.+++..  +..+..+.|+.|++++++.|.+.+ .++|+|+||+
T Consensus        60 ~ri~~v~GDl~~~~lGL~~~~~~~L~~~v~~IiH~Aa~v~~~~--~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa  136 (249)
T PF07993_consen   60 SRIEVVEGDLSQPNLGLSDEDYQELAEEVDVIIHCAASVNFNA--PYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTA  136 (249)
T ss_dssp             TTEEEEE--TTSGGGG--HHHHHHHHHH--EEEE--SS-SBS---S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEG
T ss_pred             ccEEEEeccccccccCCChHHhhccccccceeeecchhhhhcc--cchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccc
Confidence            68999999999874      56667789999999999988653  333789999999999999999776 6699999994


Q ss_pred             chhcccccCCCCccccCCCC-CchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC--c
Q 035985           89 AAVSINAQNVTGLVMDEKNW-TDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP--S  165 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~E~~~-~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~--~  165 (293)
                      . +.+....    .+.|... .............+.|..||+.+|++++.++++.|++++|+||+.|+|....+...  .
T Consensus       137 ~-v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~  211 (249)
T PF07993_consen  137 Y-VAGSRPG----TIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDD  211 (249)
T ss_dssp             G-GTTS-TT----T--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTB
T ss_pred             c-ccCCCCC----cccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccc
Confidence            3 4443331    1211100 00000001334567999999999999999998889999999999999954443222  2


Q ss_pred             -cHHHHHHHHhCCcc-cccccccccccCCCCcceeHHhHHHHH
Q 035985          166 -SVALAATLITGNDF-LLNGLKGMQMLSGSISISHVEDVCRAH  206 (293)
Q Consensus       166 -~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~v~v~D~a~~~  206 (293)
                       ....+...+..+.. ......     +...|+++||.+|++|
T Consensus       212 ~~~~~~~~~~~~~~~p~~~~~~-----~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  212 FFPYLLRSCIALGAFPDLPGDP-----DARLDLVPVDYVARAI  249 (249)
T ss_dssp             HHHHHHHHHHHH-EEES-SB--------TT--EEEHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCcccccCCC-----CceEeEECHHHHHhhC
Confidence             23334444433332 232222     3459999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.83  E-value=2.9e-19  Score=153.67  Aligned_cols=180  Identities=16%  Similarity=0.083  Sum_probs=135.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc----CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPIS----RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~----~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      ++++++++|++|++.+.++++    ++|+|||+++....   ... +.++.|+.++.++++++++.+ +++||++||.+ 
T Consensus       111 ~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~Vi~~aa~~~~---~~~-~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~-  184 (390)
T PLN02657        111 PGAEVVFGDVTDADSLRKVLFSEGDPVDVVVSCLASRTG---GVK-DSWKIDYQATKNSLDAGREVG-AKHFVLLSAIC-  184 (390)
T ss_pred             CCceEEEeeCCCHHHHHHHHHHhCCCCcEEEECCccCCC---CCc-cchhhHHHHHHHHHHHHHHcC-CCEEEEEeecc-
Confidence            578999999999999999987    59999999875321   122 567889999999999999998 99999999976 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHH
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALA  170 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~  170 (293)
                      ++.                          |...|..+|...|+.+..  .+.+++++++||+.+||+..        ..+
T Consensus       185 v~~--------------------------p~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~--------~~~  228 (390)
T PLN02657        185 VQK--------------------------PLLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG--------GQV  228 (390)
T ss_pred             ccC--------------------------cchHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH--------HHH
Confidence            321                          234688999999998865  34689999999999997421        111


Q ss_pred             HHHHhCCcccccccccccccCCCC-cceeHHhHHHHHHHhhccCC-CCCcEEEec--cCCCHHHHHHHHHHhCCC
Q 035985          171 ATLITGNDFLLNGLKGMQMLSGSI-SISHVEDVCRAHIFLAEKES-ASGRYICCA--VNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       171 ~~~~~~~~~~~~~~~g~~~~~~~~-~~v~v~D~a~~~~~~~~~~~-~~~~y~~~~--~~~t~~e~~~~i~~~~~~  241 (293)
                      .....+++..+.+.+     +..+ ++||++|+|++++.++.++. .+.+|++++  +.+|++|+++.+.+.+|+
T Consensus       229 ~~~~~g~~~~~~GdG-----~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~  298 (390)
T PLN02657        229 EIVKDGGPYVMFGDG-----KLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGK  298 (390)
T ss_pred             HhhccCCceEEecCC-----cccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCC
Confidence            122234444333322     2223 57999999999999987654 456887754  589999999999999985

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.82  E-value=3.7e-19  Score=163.77  Aligned_cols=234  Identities=13%  Similarity=0.153  Sum_probs=157.3

Q ss_pred             eEEEecCCCCCcchhhhhc--CCCEEEEecccCCCC-----CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccc
Q 035985           17 LKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFS-----SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAA   89 (293)
Q Consensus        17 v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~   89 (293)
                      +.+..+|++|++.+.+.+.  ++|+|||||+..+..     ..++. ..++.|+.++.+|+++|++.+ ++ +|++||.+
T Consensus       407 v~~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~-~~~~~N~~gt~~l~~a~~~~g-~~-~v~~Ss~~  483 (668)
T PLN02260        407 YEYGKGRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKV-ETIRANVVGTLTLADVCRENG-LL-MMNFATGC  483 (668)
T ss_pred             EEeeccccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHH-HHHHHHhHHHHHHHHHHHHcC-Ce-EEEEcccc
Confidence            4445689999988888876  799999999976421     22455 889999999999999999998 75 67777766


Q ss_pred             hhccccc---CCCCccccCCCCCchhhhccCCC-CCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCc
Q 035985           90 AVSINAQ---NVTGLVMDEKNWTDVEFLSSEKP-PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPS  165 (293)
Q Consensus        90 ~~~~~~~---~~~~~~~~E~~~~~~~~~~~~~~-p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~  165 (293)
                       +|+...   ...+.+++|++         ++. +.+.|+.+|+.+|++++.+.     ++.++|+.++||.+... ...
T Consensus       484 -v~~~~~~~~~~~~~p~~E~~---------~~~~~~~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~~-~~n  547 (668)
T PLN02260        484 -IFEYDAKHPEGSGIGFKEED---------KPNFTGSFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLSN-PRN  547 (668)
T ss_pred             -eecCCcccccccCCCCCcCC---------CCCCCCChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCCC-ccH
Confidence             443210   01113677775         333 45899999999999998764     35677777778643221 112


Q ss_pred             cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCC-CCC
Q 035985          166 SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFP-EYK  243 (293)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~-~~~  243 (293)
                      ++..+++   ... .+..         ..+..+++|++.+++.++.. ..+|+||+ +++.+|+.|+++.+++.++ ...
T Consensus       548 fv~~~~~---~~~-~~~v---------p~~~~~~~~~~~~~~~l~~~-~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~  613 (668)
T PLN02260        548 FITKISR---YNK-VVNI---------PNSMTVLDELLPISIEMAKR-NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFK  613 (668)
T ss_pred             HHHHHhc---cce-eecc---------CCCceehhhHHHHHHHHHHh-CCCceEEecCCCcCcHHHHHHHHHHhcCCccc
Confidence            2222222   222 2222         13467788999998888864 34689977 5678999999999999774 221


Q ss_pred             -CCCCCCCCC--c---ccccccchHHHHh-cCCccccCHHHHHHHHHHH
Q 035985          244 -VPTDFGDFP--S---EAKLILSSEKLIS-EGFCFKYGIEDIYDQTVEY  285 (293)
Q Consensus       244 -~~~~~~~~~--~---~~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~  285 (293)
                       .+....+.+  .   .....+|++|+++ +|. +. +|++++++++..
T Consensus       614 ~~~~~~~~~~~~~~a~rp~~~l~~~k~~~~~~~-~~-~~~~~l~~~~~~  660 (668)
T PLN02260        614 WSNFTLEEQAKVIVAPRSNNEMDASKLKKEFPE-LL-SIKESLIKYVFE  660 (668)
T ss_pred             ccccCHHHhhhHhhCCCccccccHHHHHHhCcc-cc-chHHHHHHHHhh
Confidence             222222221  1   1233899999998 788 65 899999988753

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.82  E-value=2e-19  Score=159.74  Aligned_cols=213  Identities=15%  Similarity=0.129  Sum_probs=144.6

Q ss_pred             CCeEEEecCCCCCc------chhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEeccc
Q 035985           15 GELKIFRADLTDEA------SFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSA   88 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~------~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~   88 (293)
                      .++.++.||++++.      ..+.+.+++|+|||+|+..+.. .++. ...+.|+.++.+++++|++.+.+++|||+||+
T Consensus       192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~-~~~~-~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTa  269 (605)
T PLN02503        192 SKLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD-ERYD-VAIDINTRGPCHLMSFAKKCKKLKLFLQVSTA  269 (605)
T ss_pred             ccEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc-cCHH-HHHHHHHHHHHHHHHHHHHcCCCCeEEEccCc
Confidence            57999999999983      4566667899999999987644 3344 78999999999999999987657899999999


Q ss_pred             chhcccccCCCCccccCCCCCc-h-------------------h-----------hh------------------c-cCC
Q 035985           89 AAVSINAQNVTGLVMDEKNWTD-V-------------------E-----------FL------------------S-SEK  118 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~E~~~~~-~-------------------~-----------~~------------------~-~~~  118 (293)
                      + +|+...    ..+.|..+.. .                   +           ..                  . ...
T Consensus       270 y-VyG~~~----G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~  344 (605)
T PLN02503        270 Y-VNGQRQ----GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLY  344 (605)
T ss_pred             e-eecCCC----CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhC
Confidence            7 555542    1233333210 0                   0           00                  0 012


Q ss_pred             CCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC---C---ccHHHHHHHHhCCcccccccccccccCC
Q 035985          119 PPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI---P---SSVALAATLITGNDFLLNGLKGMQMLSG  192 (293)
Q Consensus       119 ~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~  192 (293)
                      ...+.|..||.++|+++++..  .++|++|+||+.|.+....|-.   .   ...+.+.....|.-..+.+.+     +.
T Consensus       345 ~~pNtYt~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~-----~~  417 (605)
T PLN02503        345 GWQDTYVFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADP-----NG  417 (605)
T ss_pred             CCCChHHHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCC-----Ce
Confidence            335789999999999998655  3799999999999543332210   0   011111111122222233322     55


Q ss_pred             CCcceeHHhHHHHHHHhhcc-C----CCCCcEEE-ec--cCCCHHHHHHHHHHhCCC
Q 035985          193 SISISHVEDVCRAHIFLAEK-E----SASGRYIC-CA--VNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       193 ~~~~v~v~D~a~~~~~~~~~-~----~~~~~y~~-~~--~~~t~~e~~~~i~~~~~~  241 (293)
                      ..|+|+||.++.+++.++.. .    ....+|++ ++  ++++++++.+.+.+.+..
T Consensus       418 ~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        418 VLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             eEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence            79999999999999988432 1    13458987 56  799999999999987654

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.81  E-value=8.7e-19  Score=133.24  Aligned_cols=254  Identities=15%  Similarity=0.131  Sum_probs=189.0

Q ss_pred             eEEEecCCCCCcchhhhhc--CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           17 LKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        17 v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      -.++..|+.|...+++++-  .+|.+||+.+..+.-.+....-..++|++|.-|+++.|++++ . ++...|+.+++ |+
T Consensus        89 GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L-~iFVPSTIGAF-GP  165 (366)
T KOG2774|consen   89 GPYIYLDILDQKSLEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-L-KVFVPSTIGAF-GP  165 (366)
T ss_pred             CCchhhhhhccccHHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-e-eEeeccccccc-CC
Confidence            3567789999999999874  699999998876522222222678899999999999999998 6 45556888744 43


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC--ccHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP--SSVALAAT  172 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~--~~~~~~~~  172 (293)
                      ....  .+...-+         ..+|.+.||.+|..+|.+-+.+..+.|+++-++|.+.+......+.+.  ..+..+..
T Consensus       166 tSPR--NPTPdlt---------IQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~  234 (366)
T KOG2774|consen  166 TSPR--NPTPDLT---------IQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYD  234 (366)
T ss_pred             CCCC--CCCCCee---------eecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHH
Confidence            3222  2222222         567899999999999999998888889999999999888764433332  34455556


Q ss_pred             HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC---CCcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCC
Q 035985          173 LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA---SGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFG  249 (293)
Q Consensus       173 ~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~---~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~  249 (293)
                      +.+.+........     |.++++.|..||.++++.++..+..   ..+||+++-++|-.|+.+.+.+.++...+..+..
T Consensus       235 Al~~gk~tCylrp-----dtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~~sftpee~~~~~~~~~p~~~i~y~~~  309 (366)
T KOG2774|consen  235 ALQKGKHTCYLRP-----DTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTGFSFTPEEIADAIRRVMPGFEIDYDIC  309 (366)
T ss_pred             HHHcCCcccccCC-----CccCceeehHHHHHHHHHHHhCCHHHhhhheeeeceeccCHHHHHHHHHhhCCCceeecccc
Confidence            6655554444444     7789999999999999998877643   3589999999999999999999999776665533


Q ss_pred             CCC--cc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          250 DFP--SE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       250 ~~~--~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      ...  .+ ..+.+|.+.+++ ..|+-++.+...+..++.-.+++
T Consensus       310 srq~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~~i~~~~~n  353 (366)
T KOG2774|consen  310 TRQSIADSWPMSLDDSEARTEWHEKHSLHLLSIISTVVAVHKSN  353 (366)
T ss_pred             hhhhhhhhcccccCchhHhhHHHHhhhhhHHHHHHHHHHHHHhh
Confidence            211  11 667788888886 88999888888888887765553

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.80  E-value=5.4e-18  Score=132.55  Aligned_cols=228  Identities=18%  Similarity=0.193  Sum_probs=152.5

Q ss_pred             cchhhhhc-CCCEEEEecccCC--C-CCCCccccchhHHHHHHHHHHHHHhcCC-CccEEEEecccchhcccccCCCCcc
Q 035985           28 ASFDAPIS-RSDIVFHVATPVN--F-SSDDPETDMIKPAIQGVVNVLKACTKTK-TVKRVILTSSAAAVSINAQNVTGLV  102 (293)
Q Consensus        28 ~~~~~~~~-~~d~Vih~a~~~~--~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~  102 (293)
                      +.+.+... ++|+|||+||..-  . +.....+...+.-+..|..|.++..+.. +.+.+|..|.++ +|+....   ..
T Consensus        47 ~~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvG-yYG~~~~---~~  122 (297)
T COG1090          47 EGLADALTLGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVG-YYGHSGD---RV  122 (297)
T ss_pred             chhhhcccCCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEE-EecCCCc---ee
Confidence            34444444 6999999999752  1 1122334777888999999999887442 266777777776 8887754   58


Q ss_pred             ccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHH---HHHHhCCcc
Q 035985          103 MDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALA---ATLITGNDF  179 (293)
Q Consensus       103 ~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~---~~~~~~~~~  179 (293)
                      ++|+.+..+++          -+..-..-|+....+ +..|.+++++|.+.|.|+....     ...+   .+.-.|++ 
T Consensus       123 ~tE~~~~g~~F----------la~lc~~WE~~a~~a-~~~gtRvvllRtGvVLs~~GGa-----L~~m~~~fk~glGG~-  185 (297)
T COG1090         123 VTEESPPGDDF----------LAQLCQDWEEEALQA-QQLGTRVVLLRTGVVLSPDGGA-----LGKMLPLFKLGLGGK-  185 (297)
T ss_pred             eecCCCCCCCh----------HHHHHHHHHHHHhhh-hhcCceEEEEEEEEEecCCCcc-----hhhhcchhhhccCCc-
Confidence            88887443332          222223334444333 3348999999999999976432     2222   22223332 


Q ss_pred             cccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCCCCCc----c
Q 035985          180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFGDFPS----E  254 (293)
Q Consensus       180 ~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~----~  254 (293)
                         .++|.|    .++|||++|+++++..++++....|.||+ ++.+++.+++..++++++.+.. ....+++..    +
T Consensus       186 ---~GsGrQ----~~SWIhieD~v~~I~fll~~~~lsGp~N~taP~PV~~~~F~~al~r~l~RP~-~~~vP~~~~rl~LG  257 (297)
T COG1090         186 ---LGSGRQ----WFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNPVRNKEFAHALGRALHRPA-ILPVPSFALRLLLG  257 (297)
T ss_pred             ---cCCCCc----eeeeeeHHHHHHHHHHHHhCcCCCCcccccCCCcCcHHHHHHHHHHHhCCCc-cccCcHHHHHHHhh
Confidence               122322    58999999999999999999888899987 6789999999999999997421 111222110    0


Q ss_pred             -------cccccchHHHHhcCCcccc-CHHHHHHHHHH
Q 035985          255 -------AKLILSSEKLISEGFCFKY-GIEDIYDQTVE  284 (293)
Q Consensus       255 -------~~~~~d~~k~~~lG~~~~~-~~~~~i~~~i~  284 (293)
                             ...+.=..|+.+.||+.+| ++++++++.+.
T Consensus       258 e~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~il~  295 (297)
T COG1090         258 EMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALADILK  295 (297)
T ss_pred             hhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence                   3344455677778999998 89999998875

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.79  E-value=2.3e-17  Score=163.66  Aligned_cols=209  Identities=18%  Similarity=0.199  Sum_probs=142.7

Q ss_pred             CCeEEEecCCCCC------cchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEeccc
Q 035985           15 GELKIFRADLTDE------ASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSA   88 (293)
Q Consensus        15 ~~v~~v~~Dl~d~------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~   88 (293)
                      .+++++.+|++++      +.+.++..++|+|||+|+..+..  .+...+...|+.|+.+++++|++.+ +++|+|+||.
T Consensus      1034 ~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~--~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~ 1110 (1389)
T TIGR03443      1034 SRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGALVHWV--YPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSST 1110 (1389)
T ss_pred             cceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCcEecCc--cCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCe
Confidence            3789999999865      34566677899999999987643  2332555689999999999999887 8999999999


Q ss_pred             chhcccccC--------CCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCC
Q 035985           89 AAVSINAQN--------VTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLT  160 (293)
Q Consensus        89 ~~~~~~~~~--------~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~  160 (293)
                      +++......        .....+.|+.+...    ....+.+.|+.+|+.+|.++..+.+. |++++++||++|||+...
T Consensus      1111 ~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~----~~~~~~~~Y~~sK~~aE~l~~~~~~~-g~~~~i~Rpg~v~G~~~~ 1185 (1389)
T TIGR03443      1111 SALDTEYYVNLSDELVQAGGAGIPESDDLMG----SSKGLGTGYGQSKWVAEYIIREAGKR-GLRGCIVRPGYVTGDSKT 1185 (1389)
T ss_pred             eecCcccccchhhhhhhccCCCCCccccccc----ccccCCCChHHHHHHHHHHHHHHHhC-CCCEEEECCCccccCCCc
Confidence            744221100        00012334332111    12334568999999999999987765 999999999999999765


Q ss_pred             CCCC--ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC---CCcEEE-eccCCCHHHHHHH
Q 035985          161 PDIP--SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA---SGRYIC-CAVNTSVPELAKF  234 (293)
Q Consensus       161 ~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~---~~~y~~-~~~~~t~~e~~~~  234 (293)
                      +...  .++..++........ ++.      ..+.++|++++|++++++.++..+..   ..+|++ ++..+++.++++.
T Consensus      1186 g~~~~~~~~~~~~~~~~~~~~-~p~------~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 1258 (1389)
T TIGR03443      1186 GATNTDDFLLRMLKGCIQLGL-IPN------INNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGT 1258 (1389)
T ss_pred             CCCCchhHHHHHHHHHHHhCC-cCC------CCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHH
Confidence            4321  122222222111111 111      12368999999999999999876532   236766 5568999999999


Q ss_pred             HHHh
Q 035985          235 LNKR  238 (293)
Q Consensus       235 i~~~  238 (293)
                      +.+.
T Consensus      1259 l~~~ 1262 (1389)
T TIGR03443      1259 LKTY 1262 (1389)
T ss_pred             HHHh
Confidence            9764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK12320 hypothetical protein; Provisional

Probab=99.76  E-value=4.9e-17  Score=146.32  Aligned_cols=201  Identities=18%  Similarity=0.193  Sum_probs=138.2

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++++++++|++|+. +.+++.++|+|||+|+...      . .....|+.++.+++++|++.+ + ++||+||.+   +.
T Consensus        40 ~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~------~-~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~~---G~  106 (699)
T PRK12320         40 PRVDYVCASLRNPV-LQELAGEADAVIHLAPVDT------S-APGGVGITGLAHVANAAARAG-A-RLLFVSQAA---GR  106 (699)
T ss_pred             CCceEEEccCCCHH-HHHHhcCCCEEEEcCccCc------c-chhhHHHHHHHHHHHHHHHcC-C-eEEEEECCC---CC
Confidence            46899999999984 7788889999999998632      1 223579999999999999998 6 799999852   21


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      +.                          .|.    .+|.++.    .++++++++|++++||++........+..++...
T Consensus       107 ~~--------------------------~~~----~aE~ll~----~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~  152 (699)
T PRK12320        107 PE--------------------------LYR----QAETLVS----TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSK  152 (699)
T ss_pred             Cc--------------------------ccc----HHHHHHH----hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHH
Confidence            10                          121    3566543    3468999999999999965432222233322211


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFGDFPS  253 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~  253 (293)
                            ..        .....++|++|++++++.+++.+. .++||+ +++.+|++|+++.+....+...+.     ...
T Consensus       153 ------~~--------~~pI~vIyVdDvv~alv~al~~~~-~GiyNIG~~~~~Si~el~~~i~~~~p~~~~~-----~~~  212 (699)
T PRK12320        153 ------VS--------ARPIRVLHLDDLVRFLVLALNTDR-NGVVDLATPDTTNVVTAWRLLRSVDPHLRTR-----RVR  212 (699)
T ss_pred             ------Hc--------CCceEEEEHHHHHHHHHHHHhCCC-CCEEEEeCCCeeEHHHHHHHHHHhCCCcccc-----ccc
Confidence                  11        113567999999999999998643 468966 678999999999998874422211     111


Q ss_pred             c-cccccchHHHHh-cCCccccCHH--HHHHHH
Q 035985          254 E-AKLILSSEKLIS-EGFCFKYGIE--DIYDQT  282 (293)
Q Consensus       254 ~-~~~~~d~~k~~~-lG~~~~~~~~--~~i~~~  282 (293)
                      . .....|.+.++. ++|.|+.++.  +.+.++
T Consensus       213 ~~~~~~pdi~~a~~~~~w~~~~~~~~~~~~~~~  245 (699)
T PRK12320        213 SWEQLIPEVDIAAVQEDWNFEFGWQATEAIVDT  245 (699)
T ss_pred             cHHHhCCCCchhhhhcCCCCcchHHHHHHHHhh
Confidence            1 445677777776 8999998654  444444

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.74  E-value=9.5e-18  Score=137.27  Aligned_cols=140  Identities=20%  Similarity=0.237  Sum_probs=106.4

Q ss_pred             CCeEEEecCCCCCc------chhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEeccc
Q 035985           15 GELKIFRADLTDEA------SFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSA   88 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~------~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~   88 (293)
                      ++|+++.||+..+.      .+.++.+.+|.|||.|+.+++.  .|..+....|+.||..+++.|...+ .|.|+|+||+
T Consensus        60 ~ri~vv~gDl~e~~lGL~~~~~~~La~~vD~I~H~gA~Vn~v--~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsi  136 (382)
T COG3320          60 DRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHV--FPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSI  136 (382)
T ss_pred             ceEEEEecccccccCCCCHHHHHHHhhhcceEEecchhhccc--CcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeee
Confidence            68999999999764      6777888999999999998754  3444888999999999999999877 8999999999


Q ss_pred             chhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC
Q 035985           89 AAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD  162 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~  162 (293)
                      ++.............+|..+....    -..+.++|++||+.+|.+++++... |++++|+||++|.|....+.
T Consensus       137 sv~~~~~~~~~~~~~~~~~~~~~~----~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~  205 (382)
T COG3320         137 SVGETEYYSNFTVDFDEISPTRNV----GQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGA  205 (382)
T ss_pred             eeccccccCCCccccccccccccc----cCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCc
Confidence            843322222111122221211110    2245679999999999999999888 99999999999999877543

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.71  E-value=1e-16  Score=125.36  Aligned_cols=184  Identities=18%  Similarity=0.169  Sum_probs=142.0

Q ss_pred             CCCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcc
Q 035985           14 LGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSI   93 (293)
Q Consensus        14 ~~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~   93 (293)
                      +..+-+..-|+.|+++++++++...+|||+.|.--..  ... .+.+.|+.+...|++.|++.| +.|||++|+..+-  
T Consensus       108 LGQvl~~~fd~~DedSIr~vvk~sNVVINLIGrd~eT--knf-~f~Dvn~~~aerlAricke~G-VerfIhvS~Lgan--  181 (391)
T KOG2865|consen  108 LGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGRDYET--KNF-SFEDVNVHIAERLARICKEAG-VERFIHVSCLGAN--  181 (391)
T ss_pred             ccceeeeccCCCCHHHHHHHHHhCcEEEEeecccccc--CCc-ccccccchHHHHHHHHHHhhC-hhheeehhhcccc--
Confidence            3679999999999999999999999999999863222  233 678899999999999999999 9999999987521  


Q ss_pred             cccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           94 NAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        94 ~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                               +               ...+-|-.+|.++|..+++...    ..+|+||+.|||..+.     +++.....
T Consensus       182 ---------v---------------~s~Sr~LrsK~~gE~aVrdafP----eAtIirPa~iyG~eDr-----fln~ya~~  228 (391)
T KOG2865|consen  182 ---------V---------------KSPSRMLRSKAAGEEAVRDAFP----EATIIRPADIYGTEDR-----FLNYYASF  228 (391)
T ss_pred             ---------c---------------cChHHHHHhhhhhHHHHHhhCC----cceeechhhhcccchh-----HHHHHHHH
Confidence                     1               1224788999999999988664    4799999999998763     44444444


Q ss_pred             HhCCcccccccc-cccccCCCCcceeHHhHHHHHHHhhccCCCC-CcE-EEeccCCCHHHHHHHHHHhCC
Q 035985          174 ITGNDFLLNGLK-GMQMLSGSISISHVEDVCRAHIFLAEKESAS-GRY-ICCAVNTSVPELAKFLNKRFP  240 (293)
Q Consensus       174 ~~~~~~~~~~~~-g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~-~~y-~~~~~~~t~~e~~~~i~~~~~  240 (293)
                      ++.-.. ++... |.   ......|||-|+|.+|+.++.++... ..| .++...+++.|+++.+.+...
T Consensus       229 ~rk~~~-~pL~~~Ge---kT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~~  294 (391)
T KOG2865|consen  229 WRKFGF-LPLIGKGE---KTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMAR  294 (391)
T ss_pred             HHhcCc-eeeecCCc---ceeeccEEEehHHHHHHHhccCccccCceeeecCCchhhHHHHHHHHHHHHh
Confidence            443222 22222 11   12367899999999999999988654 489 678899999999999887653

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.68  E-value=5.4e-16  Score=128.59  Aligned_cols=168  Identities=14%  Similarity=0.204  Sum_probs=115.9

Q ss_pred             CCeEEEecCCCCCcchhhhh------cC-CCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecc
Q 035985           15 GELKIFRADLTDEASFDAPI------SR-SDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSS   87 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~------~~-~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS   87 (293)
                      ++++.+.+|+.|++++.+++      ++ +|.|||+++...      . .     .....+++++|++.| ++|||++||
T Consensus        39 ~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~------~-~-----~~~~~~~i~aa~~~g-v~~~V~~Ss  105 (285)
T TIGR03649        39 PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP------D-L-----APPMIKFIDFARSKG-VRRFVLLSA  105 (285)
T ss_pred             CCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC------C-h-----hHHHHHHHHHHHHcC-CCEEEEeec
Confidence            46778899999999999998      57 999999986421      1 1     234568999999999 999999998


Q ss_pred             cchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccH
Q 035985           88 AAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSV  167 (293)
Q Consensus        88 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~  167 (293)
                      .....+ .                              ..+...|.+++..   .+++++++||+.+++......     
T Consensus       106 ~~~~~~-~------------------------------~~~~~~~~~l~~~---~gi~~tilRp~~f~~~~~~~~-----  146 (285)
T TIGR03649       106 SIIEKG-G------------------------------PAMGQVHAHLDSL---GGVEYTVLRPTWFMENFSEEF-----  146 (285)
T ss_pred             cccCCC-C------------------------------chHHHHHHHHHhc---cCCCEEEEeccHHhhhhcccc-----
Confidence            652111 0                              0112234433221   389999999999886532110     


Q ss_pred             HHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEE-eccCCCHHHHHHHHHHhCCC
Q 035985          168 ALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYIC-CAVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~-~~~~~t~~e~~~~i~~~~~~  241 (293)
                        ....+......+...+     ++.++|||++|+|++++.++..+.. ++.|++ +++.+|++|+++.+.+.+|+
T Consensus       147 --~~~~~~~~~~~~~~~g-----~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~  215 (285)
T TIGR03649       147 --HVEAIRKENKIYSATG-----DGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGR  215 (285)
T ss_pred             --cccccccCCeEEecCC-----CCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCC
Confidence              0111222222222222     5579999999999999999987644 457865 66899999999999999985

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.65  E-value=3.7e-15  Score=123.03  Aligned_cols=186  Identities=21%  Similarity=0.190  Sum_probs=129.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++++|++|.+++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++    ++.+
T Consensus        48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~g~~~l~~~~~~~~~~~~  126 (276)
T PRK06482         48 DRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIR-RQIDTNLIGSIQVIRAALPHLRRQG  126 (276)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            368899999999998877654       4899999999764221      1122 56779999999999997    5555


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       .++||++||.....                        ...+.+.|+.+|...|.+++.++.+   ++++++++||+.+
T Consensus       127 -~~~iv~~sS~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~  181 (276)
T PRK06482        127 -GGRIVQVSSEGGQI------------------------AYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPA  181 (276)
T ss_pred             -CCEEEEEcCccccc------------------------CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcc
Confidence             68999999975321                        1123468999999999999988765   5899999999987


Q ss_pred             ---cCCCCCCCCC-----c-cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-ecc
Q 035985          155 ---SGPSLTPDIP-----S-SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAV  224 (293)
Q Consensus       155 ---~G~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~  224 (293)
                         ||++......     . ....+.+.+..+.              ..-+.+++|++++++.++..+.....|++ ++.
T Consensus       182 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~  247 (276)
T PRK06482        182 RTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS--------------FAIPGDPQKMVQAMIASADQTPAPRRLTLGSDA  247 (276)
T ss_pred             ccCCcccccccCCCccccchhhHHHHHHHhhcc--------------CCCCCCHHHHHHHHHHHHcCCCCCeEEecChHH
Confidence               6654332110     0 0111222222211              12246799999999999987656667866 566


Q ss_pred             CCCHHHHHHHHHHhCC
Q 035985          225 NTSVPELAKFLNKRFP  240 (293)
Q Consensus       225 ~~t~~e~~~~i~~~~~  240 (293)
                      ..+..+++..+.+..+
T Consensus       248 ~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        248 YASIRAALSERLAALE  263 (276)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            7788887777666543

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.61  E-value=7.1e-15  Score=125.14  Aligned_cols=216  Identities=18%  Similarity=0.137  Sum_probs=144.8

Q ss_pred             CCeEEEecCCCCCc------chhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEeccc
Q 035985           15 GELKIFRADLTDEA------SFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSA   88 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~------~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~   88 (293)
                      .++..+.||+++++      ++..+.+++|+|||+|+.+.+.  .+.......|+.|++++++.|++..+.+-|+++||+
T Consensus        79 ~Kv~pi~GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFd--e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTA  156 (467)
T KOG1221|consen   79 EKVVPIAGDISEPDLGISESDLRTLADEVNIVIHSAATVRFD--EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTA  156 (467)
T ss_pred             ecceeccccccCcccCCChHHHHHHHhcCCEEEEeeeeeccc--hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehh
Confidence            68999999999874      4555677999999999988765  333377889999999999999999889999999997


Q ss_pred             chhcccccCCCCcccc--C----------CCCCchh-----hhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEcc
Q 035985           89 AAVSINAQNVTGLVMD--E----------KNWTDVE-----FLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIP  151 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~--E----------~~~~~~~-----~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~  151 (293)
                      ++- .....-.+.+..  |          +.+...+     -+.......+.|..+|+.+|.++...++  ++|++|+||
T Consensus       157 y~n-~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~--~lPivIiRP  233 (467)
T KOG1221|consen  157 YSN-CNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE--NLPLVIIRP  233 (467)
T ss_pred             hee-cccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc--CCCeEEEcC
Confidence            632 111110000110  0          1111111     0111223567899999999999987654  699999999


Q ss_pred             CCccCCCCCCCCCccHHH-------HHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc-----C-CCCCc
Q 035985          152 SLMSGPSLTPDIPSSVAL-------AATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK-----E-SASGR  218 (293)
Q Consensus       152 ~~v~G~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~-----~-~~~~~  218 (293)
                      +.|......|-. .++..       ++..-.|.-..+..     ++++..|+|.+|.++.+++.+.-.     + ..-.+
T Consensus       234 siI~st~~EP~p-GWidn~~gp~g~i~g~gkGvlr~~~~-----d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~I  307 (467)
T KOG1221|consen  234 SIITSTYKEPFP-GWIDNLNGPDGVIIGYGKGVLRCFLV-----DPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPI  307 (467)
T ss_pred             CceeccccCCCC-CccccCCCCceEEEEeccceEEEEEE-----ccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcE
Confidence            999998766532 22211       11111222222222     236778999999999999876521     1 11238


Q ss_pred             EEEe-c--cCCCHHHHHHHHHHhCCC
Q 035985          219 YICC-A--VNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       219 y~~~-~--~~~t~~e~~~~i~~~~~~  241 (293)
                      |+++ +  .+++++++.+...+.+..
T Consensus       308 Y~~tss~~Np~t~~~~~e~~~~~~~~  333 (467)
T KOG1221|consen  308 YHLTSSNDNPVTWGDFIELALRYFEK  333 (467)
T ss_pred             EEecccccCcccHHHHHHHHHHhccc
Confidence            8764 3  589999999999998753

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.59  E-value=2.6e-14  Score=110.62  Aligned_cols=145  Identities=28%  Similarity=0.332  Sum_probs=106.6

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++++++++|+.|++++.++++++|+|||+++....            +...+.++++++++.+ ++++|++||.+ ++..
T Consensus        39 ~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~------------~~~~~~~~~~a~~~~~-~~~~v~~s~~~-~~~~  104 (183)
T PF13460_consen   39 PGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK------------DVDAAKNIIEAAKKAG-VKRVVYLSSAG-VYRD  104 (183)
T ss_dssp             TTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT------------HHHHHHHHHHHHHHTT-SSEEEEEEETT-GTTT
T ss_pred             cccccceeeehhhhhhhhhhhhcchhhhhhhhhcc------------cccccccccccccccc-cccceeeeccc-cCCC
Confidence            68999999999999999999999999999975321            2777889999999998 99999999997 4443


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      ...   ....+..           .....|...|..+|+.++    +.+++++++||+.+||+.....  ..        
T Consensus       105 ~~~---~~~~~~~-----------~~~~~~~~~~~~~e~~~~----~~~~~~~ivrp~~~~~~~~~~~--~~--------  156 (183)
T PF13460_consen  105 PPG---LFSDEDK-----------PIFPEYARDKREAEEALR----ESGLNWTIVRPGWIYGNPSRSY--RL--------  156 (183)
T ss_dssp             CTS---EEEGGTC-----------GGGHHHHHHHHHHHHHHH----HSTSEEEEEEESEEEBTTSSSE--EE--------
T ss_pred             CCc---ccccccc-----------cchhhhHHHHHHHHHHHH----hcCCCEEEEECcEeEeCCCcce--eE--------
Confidence            221   1111111           111478888888887773    3489999999999999864311  11        


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK  212 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~  212 (293)
                            +....     ....++|+++|+|++++.++++
T Consensus       157 ------~~~~~-----~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  157 ------IKEGG-----PQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             ------ESSTS-----TTSHCEEEHHHHHHHHHHHHH-
T ss_pred             ------EeccC-----CCCcCcCCHHHHHHHHHHHhCC
Confidence                  10011     2357899999999999998864

...

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.56  E-value=1.2e-13  Score=112.32  Aligned_cols=182  Identities=21%  Similarity=0.144  Sum_probs=120.3

Q ss_pred             CCeEEEecCCCCC-cchhhhh-cCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDE-ASFDAPI-SRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~-~~~~~~~-~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++++|++|. +.+.+.+ .++|+|||+++....  .++. ..+..|..++.++++++++.+ +++||++||.+ +|
T Consensus        62 ~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~~~~--~~~~-~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~-v~  136 (251)
T PLN00141         62 PSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFRRS--FDPF-APWKVDNFGTVNLVEACRKAG-VTRFILVSSIL-VN  136 (251)
T ss_pred             CceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCCCcC--CCCC-CceeeehHHHHHHHHHHHHcC-CCEEEEEcccc-cc
Confidence            4689999999984 6677777 689999999886431  1233 446788899999999999988 89999999987 45


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAAT  172 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~  172 (293)
                      +....   .+..+...        ...+...|...|..+|.+++    +.+++++++||+++++......          
T Consensus       137 g~~~~---~~~~~~~~--------~~~~~~~~~~~k~~~e~~l~----~~gi~~~iirpg~~~~~~~~~~----------  191 (251)
T PLN00141        137 GAAMG---QILNPAYI--------FLNLFGLTLVAKLQAEKYIR----KSGINYTIVRPGGLTNDPPTGN----------  191 (251)
T ss_pred             CCCcc---cccCcchh--------HHHHHHHHHHHHHHHHHHHH----hcCCcEEEEECCCccCCCCCce----------
Confidence            43211   11111100        00112234556888877654    3489999999999997642110          


Q ss_pred             HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcE-EEe---ccCCCHHHHHHHHHH
Q 035985          173 LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRY-ICC---AVNTSVPELAKFLNK  237 (293)
Q Consensus       173 ~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y-~~~---~~~~t~~e~~~~i~~  237 (293)
                            ..+....     .....+++.+|+|++++.++..+.. ..++ +++   +...+++++...+++
T Consensus       192 ------~~~~~~~-----~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        192 ------IVMEPED-----TLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             ------EEECCCC-----ccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence                  0011100     0123579999999999999987664 3456 443   234789998888765

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.53  E-value=2.8e-14  Score=116.83  Aligned_cols=170  Identities=22%  Similarity=0.227  Sum_probs=114.0

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHH----HHHHHHHH-hcCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQG----VVNVLKAC-TKTK   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~----~~~l~~~~-~~~~   77 (293)
                      ++.++++|++|.+.+.++++       .+|+|||+|+......      .... ..++.|+.+    +.++++++ ++.+
T Consensus        57 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~l~~~~~~~~  135 (262)
T PRK13394         57 KAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWK-KMQAIHVDGAFLTTKAALKHMYKDDR  135 (262)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHH-HHHHhhhhhHHHHHHHHHHHHHhhcC
Confidence            57889999999998877765       3899999999753211      1122 567789988    66677777 5555


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       .++||++||.....+                        ..+.+.|+.+|...+.+++.++.+   .+++++++||+.+
T Consensus       136 -~~~iv~~ss~~~~~~------------------------~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v  190 (262)
T PRK13394        136 -GGVVIYMGSVHSHEA------------------------SPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFV  190 (262)
T ss_pred             -CcEEEEEcchhhcCC------------------------CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcc
Confidence             789999999753321                        112357999999999999888765   3899999999999


Q ss_pred             cCCCCCCCCCcc-------HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CC-cEEEec
Q 035985          155 SGPSLTPDIPSS-------VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~-~y~~~~  223 (293)
                      +++.........       .......+       .. .+    ....+|++++|++++++.++.....  .| .|++++
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~----~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~  257 (262)
T PRK13394        191 RTPLVDKQIPEQAKELGISEEEVVKKV-------ML-GK----TVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSH  257 (262)
T ss_pred             cchhhhhhhHhhhhccCCChHHHHHHH-------Hh-cC----CCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCC
Confidence            988532211000       00000000       00 10    1247899999999999999876432  24 456644

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.53  E-value=1.5e-13  Score=113.29  Aligned_cols=188  Identities=21%  Similarity=0.167  Sum_probs=127.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      ..+.++++|++|++++.++++       ++|+|||+||.....      ..+.. ..++.|+.++..+++++    ++.+
T Consensus        49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  127 (275)
T PRK08263         49 DRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEAR-AQIDTNFFGALWVTQAVLPYLREQR  127 (275)
T ss_pred             CCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            367889999999988876654       579999999976421      11222 67889999988887775    4555


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       .+++|++||...+.+.+                        ....|+.+|...+.+++.++.+   +|++++++||+.+
T Consensus       128 -~~~iv~vsS~~~~~~~~------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~  182 (275)
T PRK08263        128 -SGHIIQISSIGGISAFP------------------------MSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGY  182 (275)
T ss_pred             -CCEEEEEcChhhcCCCC------------------------CccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCc
Confidence             67999999976433211                        2347999999999999888765   5899999999988


Q ss_pred             cCCCCCCCCC--ccHHHHHHHHhCCcccccccccccccCCCCcc-eeHHhHHHHHHHhhccCCCCCcEE-Eec-cCCCHH
Q 035985          155 SGPSLTPDIP--SSVALAATLITGNDFLLNGLKGMQMLSGSISI-SHVEDVCRAHIFLAEKESASGRYI-CCA-VNTSVP  229 (293)
Q Consensus       155 ~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-v~v~D~a~~~~~~~~~~~~~~~y~-~~~-~~~t~~  229 (293)
                      ..+.......  ........ +....  ...       .....+ +.++|++++++.+++.+...+.|+ +++ ..+++.
T Consensus       183 ~t~~~~~~~~~~~~~~~~~~-~~~~~--~~~-------~~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~  252 (275)
T PRK08263        183 STDWAGTSAKRATPLDAYDT-LREEL--AEQ-------WSERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKA  252 (275)
T ss_pred             cCCccccccccCCCchhhhh-HHHHH--HHH-------HHhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHH
Confidence            7764321110  00000000 00000  000       012345 889999999999999877766674 433 678999


Q ss_pred             HHHHHHHHh
Q 035985          230 ELAKFLNKR  238 (293)
Q Consensus       230 e~~~~i~~~  238 (293)
                      ++.+.+.+.
T Consensus       253 ~~~~~~~~~  261 (275)
T PRK08263        253 DYERRLATW  261 (275)
T ss_pred             HHHHHHHHH
Confidence            999888874

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.51  E-value=4.7e-13  Score=117.52  Aligned_cols=180  Identities=17%  Similarity=0.144  Sum_probs=119.5

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccc
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINA   95 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~   95 (293)
                      +++++++|++|.+++.+++.++|+|||++|.......+.. ..+.+|+.++.++++++++.+ ++|||++||.++.. ..
T Consensus       139 ~v~iV~gDLtD~esI~~aLggiDiVVn~AG~~~~~v~d~~-~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~-~g  215 (576)
T PLN03209        139 KLEIVECDLEKPDQIGPALGNASVVICCIGASEKEVFDVT-GPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNK-VG  215 (576)
T ss_pred             ceEEEEecCCCHHHHHHHhcCCCEEEEccccccccccchh-hHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcc-cC
Confidence            5889999999999999999999999999987542222333 668899999999999999988 89999999986311 00


Q ss_pred             cCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHHh
Q 035985           96 QNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLIT  175 (293)
Q Consensus        96 ~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~  175 (293)
                             ..+.          .......|...|..+|..+.    ..|+++++|||+.++++.........+    ....
T Consensus       216 -------~p~~----------~~~sk~~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~~~~t~~v----~~~~  270 (576)
T PLN03209        216 -------FPAA----------ILNLFWGVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNL----TLSE  270 (576)
T ss_pred             -------cccc----------chhhHHHHHHHHHHHHHHHH----HcCCCEEEEECCeecCCccccccccce----eecc
Confidence                   0000          11123467778888887764    358999999999998774321100000    0000


Q ss_pred             CCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC-C-CCcE-EEeccC---CCHHHHHHHHH
Q 035985          176 GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES-A-SGRY-ICCAVN---TSVPELAKFLN  236 (293)
Q Consensus       176 ~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~-~-~~~y-~~~~~~---~t~~e~~~~i~  236 (293)
                      +. .  .          ..-.+..+|+|++++.++.++. . +.+| ++++..   ..+.+++..+-
T Consensus       271 ~d-~--~----------~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~ip  324 (576)
T PLN03209        271 ED-T--L----------FGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKIP  324 (576)
T ss_pred             cc-c--c----------CCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhcc
Confidence            00 0  0          1124779999999999988664 3 3467 445543   44555554443

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.50  E-value=7.7e-13  Score=109.04  Aligned_cols=170  Identities=16%  Similarity=0.119  Sum_probs=113.3

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      ++.++.+|++|.+++.++++       ++|+|||+||......      .... ..+..|+.++.++++++.    +.+ 
T Consensus        60 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~l~~~~~~~-  137 (274)
T PRK07775         60 EAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFE-SQVQIHLVGANRLATAVLPGMIERR-  137 (274)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            57888999999998887665       5799999998754211      1122 556899999999988865    333 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..+||++||...+.+.                        .+...|+.+|...|.+++.++.+.   |++++++||+.+.
T Consensus       138 ~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~  193 (274)
T PRK07775        138 RGDLIFVGSDVALRQR------------------------PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTL  193 (274)
T ss_pred             CceEEEECChHhcCCC------------------------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCccc
Confidence            5689999997533211                        123479999999999999988654   8999999998875


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEe
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICC  222 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~  222 (293)
                      ++.........+..+......    ...       .....++|++|+|++++.+++.+..+.+||+.
T Consensus       194 t~~~~~~~~~~~~~~~~~~~~----~~~-------~~~~~~~~~~dva~a~~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        194 TGMGWSLPAEVIGPMLEDWAK----WGQ-------ARHDYFLRASDLARAITFVAETPRGAHVVNME  249 (274)
T ss_pred             CcccccCChhhhhHHHHHHHH----hcc-------cccccccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence            542211111111111111100    001       11466899999999999999876444466653

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.49  E-value=7.3e-13  Score=108.17  Aligned_cols=183  Identities=18%  Similarity=0.163  Sum_probs=123.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC---CCcc--ccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS---DDPE--TDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~---~~~~--~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .+++++++|+.|.+++.+++.       ++|+|||+++......   .++.  ...+..|+.++.++++++.    +.+ 
T Consensus        49 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-  127 (257)
T PRK07074         49 ARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-  127 (257)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-
Confidence            368899999999998877765       4899999998753211   1111  1345688998888888773    344 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..+||++||..... ..                        ....|+.+|...+.+++.++.++   +++++++||+.+.
T Consensus       128 ~~~iv~~sS~~~~~-~~------------------------~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~  182 (257)
T PRK07074        128 RGAVVNIGSVNGMA-AL------------------------GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVK  182 (257)
T ss_pred             CeEEEEEcchhhcC-CC------------------------CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCC
Confidence            57899999964211 00                        01269999999999999988664   7999999999998


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCc-EEE-eccCCCHHHH
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGR-YIC-CAVNTSVPEL  231 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~-y~~-~~~~~t~~e~  231 (293)
                      ++......... ..+.......             ....+|++++|++++++.++....  ..|. +++ +|...+.+||
T Consensus       183 t~~~~~~~~~~-~~~~~~~~~~-------------~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~  248 (257)
T PRK07074        183 TQAWEARVAAN-PQVFEELKKW-------------YPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREM  248 (257)
T ss_pred             cchhhcccccC-hHHHHHHHhc-------------CCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhh
Confidence            87532211111 1111111110             114679999999999999996532  2344 456 5678889999


Q ss_pred             HHHHHH
Q 035985          232 AKFLNK  237 (293)
Q Consensus       232 ~~~i~~  237 (293)
                      ++.+..
T Consensus       249 ~~~~~~  254 (257)
T PRK07074        249 ARTLTL  254 (257)
T ss_pred             hhhhcc
Confidence            988764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.49  E-value=1e-13  Score=113.05  Aligned_cols=177  Identities=19%  Similarity=0.180  Sum_probs=113.3

Q ss_pred             CCeEEEecCCCCCcchhhhh-------cCCCEEEEecccCCCCC--C-Cc--cccchhHHHHHHHHHHHHH----hcCCC
Q 035985           15 GELKIFRADLTDEASFDAPI-------SRSDIVFHVATPVNFSS--D-DP--ETDMIKPAIQGVVNVLKAC----TKTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~~~--~-~~--~~~~~~~n~~~~~~l~~~~----~~~~~   78 (293)
                      .++.++++|+.|++++.+++       .++|+|||+|+......  . .+  .+..+..|+.++..+++++    ++.+ 
T Consensus        50 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-  128 (255)
T TIGR01963        50 GSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-  128 (255)
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            36889999999998665544       46899999998754211  1 11  1255678999988887776    4556 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      +++||++||...+.+.+                        ....|+.+|...+.+++.++.+   .+++++++||+.++
T Consensus       129 ~~~~v~~ss~~~~~~~~------------------------~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~  184 (255)
T TIGR01963       129 WGRIINIASAHGLVASP------------------------FKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVR  184 (255)
T ss_pred             CeEEEEEcchhhcCCCC------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence            78999999975333211                        1247999999999999887664   38999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCccccc--ccccccccCCCCcceeHHhHHHHHHHhhccCCC---CCcEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLN--GLKGMQMLSGSISISHVEDVCRAHIFLAEKESA---SGRYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~---~~~y~~~~  223 (293)
                      ++....       .+............  ...........+++++++|+|++++.++.....   +..|++++
T Consensus       185 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~  250 (255)
T TIGR01963       185 TPLVEK-------QIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDG  250 (255)
T ss_pred             cHHHHH-------HHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcC
Confidence            874211       01111100000000  000000012256899999999999999976422   33567754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.48  E-value=3.5e-13  Score=111.27  Aligned_cols=177  Identities=16%  Similarity=0.099  Sum_probs=116.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCcc---ccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDPE---TDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~~---~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++..+.+|++|.+++.++++       ++|+|||+||......  ..+.   ...++.|+.++.++++++.    +.+ 
T Consensus        50 ~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-  128 (277)
T PRK06180         50 DRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-  128 (277)
T ss_pred             CCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-
Confidence            368889999999998877765       5899999999754211  1111   2558899999999998853    444 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      .+++|++||.....+.                        .+...|+.+|...|.+++.++.+   .|++++++||+.+.
T Consensus       129 ~~~iv~iSS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~  184 (277)
T PRK06180        129 RGHIVNITSMGGLITM------------------------PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFR  184 (277)
T ss_pred             CCEEEEEecccccCCC------------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcc
Confidence            5799999997643321                        13358999999999999888765   48999999999998


Q ss_pred             CCCCCCCCC---ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEec
Q 035985          156 GPSLTPDIP---SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCA  223 (293)
Q Consensus       156 G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~  223 (293)
                      ++.......   .....................       ...+..++|++++++.+++.+.....|..++
T Consensus       185 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~  248 (277)
T PRK06180        185 TDWAGRSMVRTPRSIADYDALFGPIRQAREAKS-------GKQPGDPAKAAQAILAAVESDEPPLHLLLGS  248 (277)
T ss_pred             cCccccccccCCCCcHhHHHHHHHHHHHHHhhc-------cCCCCCHHHHHHHHHHHHcCCCCCeeEeccH
Confidence            764322111   011111110000000000001       1345679999999999999876665665443

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.47  E-value=1.1e-12  Score=106.63  Aligned_cols=176  Identities=19%  Similarity=0.125  Sum_probs=116.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCC-CccEEEEec
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTK-TVKRVILTS   86 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S   86 (293)
                      .++.++++|++|++++.++++       ++|+|||+|+.......++. ..++.|+.++.++++++.+.- ...++|++|
T Consensus        56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~-~~~~vn~~~~~~l~~~~~~~~~~~~~iv~is  134 (248)
T PRK07806         56 GRASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGMESGMDED-YAMRLNRDAQRNLARAALPLMPAGSRVVFVT  134 (248)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcc-eeeEeeeHHHHHHHHHHHhhccCCceEEEEe
Confidence            357889999999998877664       58999999986543333444 778899999999999998641 135899999


Q ss_pred             ccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCCCCCCC
Q 035985           87 SAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPSLTPDI  163 (293)
Q Consensus        87 S~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~  163 (293)
                      |....+...        .+..           .....|+.+|..+|.+++.++.+   .++++++++|+.+-++....  
T Consensus       135 S~~~~~~~~--------~~~~-----------~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~--  193 (248)
T PRK07806        135 SHQAHFIPT--------VKTM-----------PEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTAT--  193 (248)
T ss_pred             CchhhcCcc--------ccCC-----------ccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhh--
Confidence            964322110        0111           11358999999999999998764   37999999988765542110  


Q ss_pred             CccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEeccC
Q 035985          164 PSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICCAVN  225 (293)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~~~~  225 (293)
                            +...  ..+..+....     .....+++++|++++++.++++....| +|+++|..
T Consensus       194 ------~~~~--~~~~~~~~~~-----~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~  243 (248)
T PRK07806        194 ------LLNR--LNPGAIEARR-----EAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGAD  243 (248)
T ss_pred             ------hhcc--CCHHHHHHHH-----hhhcccCCHHHHHHHHHHHhhccccCccEEEecCcc
Confidence                  0000  0000000000     002468999999999999998765445 67775543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.47  E-value=3.3e-14  Score=114.38  Aligned_cols=179  Identities=21%  Similarity=0.206  Sum_probs=117.5

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++++|+.|++++.++|+++|+||.+.+...           ...+....+++++|++.| |++||+ ||....+. 
T Consensus        43 ~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~-----------~~~~~~~~~li~Aa~~ag-Vk~~v~-ss~~~~~~-  108 (233)
T PF05368_consen   43 LGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH-----------PSELEQQKNLIDAAKAAG-VKHFVP-SSFGADYD-  108 (233)
T ss_dssp             TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC-----------CCHHHHHHHHHHHHHHHT--SEEEE-SEESSGTT-
T ss_pred             ccceEeecccCCHHHHHHHHcCCceEEeecCcch-----------hhhhhhhhhHHHhhhccc-cceEEE-EEeccccc-
Confidence            3789999999999999999999999998876533           112445678999999999 999997 55432221 


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                                +..         ...|.......|...|+++++    .+++++++|++.++.......     .. ....
T Consensus       109 ----------~~~---------~~~p~~~~~~~k~~ie~~l~~----~~i~~t~i~~g~f~e~~~~~~-----~~-~~~~  159 (233)
T PF05368_consen  109 ----------ESS---------GSEPEIPHFDQKAEIEEYLRE----SGIPYTIIRPGFFMENLLPPF-----AP-VVDI  159 (233)
T ss_dssp             ----------TTT---------TSTTHHHHHHHHHHHHHHHHH----CTSEBEEEEE-EEHHHHHTTT-----HH-TTCS
T ss_pred             ----------ccc---------cccccchhhhhhhhhhhhhhh----ccccceeccccchhhhhhhhh-----cc-cccc
Confidence                      110         112333455678888877644    489999999997765322110     00 0011


Q ss_pred             hCCc--ccccccccccccCCCCcc-eeHHhHHHHHHHhhccCCCC--Cc-EEEeccCCCHHHHHHHHHHhCCC
Q 035985          175 TGND--FLLNGLKGMQMLSGSISI-SHVEDVCRAHIFLAEKESAS--GR-YICCAVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       175 ~~~~--~~~~~~~g~~~~~~~~~~-v~v~D~a~~~~~~~~~~~~~--~~-y~~~~~~~t~~e~~~~i~~~~~~  241 (293)
                      .+..  ..+....     +....+ ++.+|++++.+.++.++...  +. +.++++.+|++|+++.+.+.+|+
T Consensus       160 ~~~~~~~~~~~~~-----~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~~~~t~~eia~~~s~~~G~  227 (233)
T PF05368_consen  160 KKSKDVVTLPGPG-----NQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAGETLTYNEIAAILSKVLGK  227 (233)
T ss_dssp             CCTSSEEEEETTS-----TSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGGGEEEHHHHHHHHHHHHTS
T ss_pred             cccceEEEEccCC-----CccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCCCCCCHHHHHHHHHHHHCC
Confidence            2211  2222222     223556 49999999999999887654  34 46678899999999999999885

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.47  E-value=1.1e-12  Score=106.38  Aligned_cols=165  Identities=24%  Similarity=0.254  Sum_probs=116.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .+++++.+|++|++.+.++++       ++|+|||+|+......      .+.. ..++.|+.++.++++.+    ++.+
T Consensus        56 ~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  134 (249)
T PRK12825         56 RRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWD-EVIDVNLSGVFHLLRAVVPPMRKQR  134 (249)
T ss_pred             CceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            468899999999998887764       5799999999653221      1122 66788999999988887    4556


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       .++||++||...+++.                        .+...|+.+|...+.+++.++++   .+++++++||+.+
T Consensus       135 -~~~~i~~SS~~~~~~~------------------------~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~  189 (249)
T PRK12825        135 -GGRIVNISSVAGLPGW------------------------PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDI  189 (249)
T ss_pred             -CCEEEEECccccCCCC------------------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCc
Confidence             7899999998744321                        12357999999999999887665   4899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEe
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICC  222 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~  222 (293)
                      +|+.......   .....   . ....   .       ...+++.+|+++++..++....   .+.+|+++
T Consensus       190 ~~~~~~~~~~---~~~~~---~-~~~~---~-------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~  243 (249)
T PRK12825        190 DTDMKEATIE---EAREA---K-DAET---P-------LGRSGTPEDIARAVAFLCSDASDYITGQVIEVT  243 (249)
T ss_pred             cCCccccccc---hhHHh---h-hccC---C-------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeC
Confidence            9986543211   11111   0 0001   1       2348999999999999997643   23466664

>PRK09135 pteridine reductase; Provisional

Probab=99.45  E-value=1.9e-12  Score=105.19  Aligned_cols=170  Identities=17%  Similarity=0.138  Sum_probs=112.6

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC--CCcc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT--KTVK   80 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~   80 (293)
                      .+.++.+|++|.+++.++++       ++|+|||+|+.....      ..++. .+++.|+.++.++++++...  .+-.
T Consensus        58 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~g~~~l~~~~~~~~~~~~~  136 (249)
T PRK09135         58 SAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWD-DLFASNLKAPFFLSQAAAPQLRKQRG  136 (249)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhchhHHHHHHHHHHHHhhCCe
Confidence            58889999999998887765       479999999964321      11123 67889999999999998642  1123


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccCCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSGPS  158 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~  158 (293)
                      .++.+||...               ..         +..+.+.|+.+|...|.+++.++.++  +++++++||+.++|+.
T Consensus       137 ~~~~~~~~~~---------------~~---------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~  192 (249)
T PRK09135        137 AIVNITDIHA---------------ER---------PLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPE  192 (249)
T ss_pred             EEEEEeChhh---------------cC---------CCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcc
Confidence            5666555321               11         33456799999999999999988775  6999999999999997


Q ss_pred             CCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC-C-CCCcEEE-eccCC
Q 035985          159 LTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE-S-ASGRYIC-CAVNT  226 (293)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~-~-~~~~y~~-~~~~~  226 (293)
                      .......   ........... +            .-+.+++|+++++..++... . .+.+|++ +|..+
T Consensus       193 ~~~~~~~---~~~~~~~~~~~-~------------~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        193 DGNSFDE---EARQAILARTP-L------------KRIGTPEDIAEAVRFLLADASFITGQILAVDGGRSL  247 (249)
T ss_pred             ccccCCH---HHHHHHHhcCC-c------------CCCcCHHHHHHHHHHHcCccccccCcEEEECCCeec
Confidence            6432221   11111111111 1            11235899999996665432 2 3446777 44443

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.45  E-value=3.2e-13  Score=110.34  Aligned_cols=176  Identities=21%  Similarity=0.219  Sum_probs=112.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCcc---ccchhHHHHHHHHH----HHHHhcCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDPE---TDMIKPAIQGVVNV----LKACTKTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~~---~~~~~~n~~~~~~l----~~~~~~~~~   78 (293)
                      .+++++.+|++|++++.++++       .+|+|||+|+......  ..+.   +..++.|+.++.++    +.++++.+ 
T Consensus        53 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-  131 (258)
T PRK12429         53 GKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-  131 (258)
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-
Confidence            468899999999998877765       5899999998654221  1111   14566788885444    44555556 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      .++||++||...+++.                        .+.+.|+.+|...+.+++.++.+.   +++++++||+.++
T Consensus       132 ~~~iv~iss~~~~~~~------------------------~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~  187 (258)
T PRK12429        132 GGRIINMASVHGLVGS------------------------AGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVD  187 (258)
T ss_pred             CeEEEEEcchhhccCC------------------------CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCc
Confidence            7899999998644321                        233589999999999988876653   7999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCccc--c-cccccccccCCCCcceeHHhHHHHHHHhhccCCC--CC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFL--L-NGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~-~y~~~~  223 (293)
                      ++......    ...... .+....  . ....   .....+.|++++|+|+++..++.....  .+ .|++++
T Consensus       188 ~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  253 (258)
T PRK12429        188 TPLVRKQI----PDLAKE-RGISEEEVLEDVLL---PLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDG  253 (258)
T ss_pred             chhhhhhh----hhhccc-cCCChHHHHHHHHh---ccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCC
Confidence            87543211    000000 000000  0 0000   001146799999999999998876432  24 556654

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.43  E-value=1.3e-12  Score=108.14  Aligned_cols=176  Identities=21%  Similarity=0.180  Sum_probs=116.8

Q ss_pred             CCeEEEecCCCCCcchhhhh-------cCCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPI-------SRSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .+++++.+|++|++++.+ +       ..+|+|||+|+......      .+.. ..+..|+.++.++++.+    ++.+
T Consensus        54 ~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  131 (280)
T PRK06914         54 QNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYR-KQFETNVFGAISVTQAVLPYMRKQK  131 (280)
T ss_pred             CceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            368899999999988765 3       25799999998754221      1112 56778999988888775    5555


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH---hCCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ---ENNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~---~~~~~~~ilR~~~v  154 (293)
                       ..+||++||....++.                        .+...|+.+|...+.+++.++.   ..+++++++||+.+
T Consensus       132 -~~~iv~vsS~~~~~~~------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~  186 (280)
T PRK06914        132 -SGKIINISSISGRVGF------------------------PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSY  186 (280)
T ss_pred             -CCEEEEECcccccCCC------------------------CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCc
Confidence             6899999997544322                        1335899999999999988763   44899999999999


Q ss_pred             cCCCCCCCCC---------ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEe-cc
Q 035985          155 SGPSLTPDIP---------SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICC-AV  224 (293)
Q Consensus       155 ~G~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~-~~  224 (293)
                      .++.......         .........+.+..    .       .....+++++|+|++++.+++++.....|+++ +.
T Consensus       187 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~  255 (280)
T PRK06914        187 NTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI----N-------SGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGV  255 (280)
T ss_pred             ccchhhccccccccccccccchHHHHHHHHHHH----h-------hhhhccCCHHHHHHHHHHHHcCCCCCcccccCCch
Confidence            8874221100         00111111111000    0       01245788999999999999988766567654 44


Q ss_pred             CCCH
Q 035985          225 NTSV  228 (293)
Q Consensus       225 ~~t~  228 (293)
                      .+++
T Consensus       256 ~~~~  259 (280)
T PRK06914        256 KLMI  259 (280)
T ss_pred             HHHH
Confidence            4443

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.43  E-value=2.9e-12  Score=103.97  Aligned_cols=167  Identities=14%  Similarity=0.146  Sum_probs=115.3

Q ss_pred             CCeEEEecCCCCCcchhhhhcC-------CCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPISR-------SDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~-------~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++.+|++|++++.++++.       +|+|||+|+......      .... +.++.|+.++..+++++..    .+
T Consensus        56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  134 (247)
T PRK12935         56 HDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWE-RVIDVNLSSVFNTTSAVLPYITEAE  134 (247)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            3688899999999988877754       799999999754221      1233 6788999999999988863    33


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||....++.                        .+...|+.+|...+.+++.++.+.   ++++++++|+.+
T Consensus       135 -~~~iv~~sS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v  189 (247)
T PRK12935        135 -EGRIISISSIIGQAGG------------------------FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFI  189 (247)
T ss_pred             -CcEEEEEcchhhcCCC------------------------CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCC
Confidence             4689999997543321                        123589999999998888877653   899999999998


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y~~~~~  224 (293)
                      .++....    ............             .....+.+++|++++++.+++...  .+..|++++.
T Consensus       190 ~t~~~~~----~~~~~~~~~~~~-------------~~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        190 DTEMVAE----VPEEVRQKIVAK-------------IPKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             cChhhhh----ccHHHHHHHHHh-------------CCCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence            7653211    111111111110             013568999999999999887542  3457776543

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.42  E-value=5.2e-12  Score=104.29  Aligned_cols=185  Identities=18%  Similarity=0.141  Sum_probs=124.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC--C-----CCCccccchhHHHHHHHHHHHHHhcC----
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF--S-----SDDPETDMIKPAIQGVVNVLKACTKT----   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~--~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----   76 (293)
                      .++.++.+|++|++.+.++++       .+|+|||+|+....  .     ..+.. ..++.|+.++..+++++.+.    
T Consensus        58 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~  136 (276)
T PRK05875         58 GAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWR-RTVDLNVNGTMYVLKHAARELVRG  136 (276)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhc
Confidence            367889999999998887765       68999999986421  0     11122 56788999999998876543    


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..+||++||.....                        +..+.+.|+.+|...|.+++.++.+.   +++++++||+.
T Consensus       137 ~-~g~iv~~sS~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~  191 (276)
T PRK05875        137 G-GGSFVGISSIAASN------------------------THRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGL  191 (276)
T ss_pred             C-CcEEEEEechhhcC------------------------CCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCc
Confidence            3 45899999976321                        11234689999999999999987664   69999999998


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC---CCcEEE-eccCC---
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA---SGRYIC-CAVNT---  226 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~---~~~y~~-~~~~~---  226 (293)
                      +.++........  ......+....      .       ...+++++|+++++..+++.+..   +.+|++ +|..+   
T Consensus       192 v~t~~~~~~~~~--~~~~~~~~~~~------~-------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~  256 (276)
T PRK05875        192 IRTDLVAPITES--PELSADYRACT------P-------LPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRG  256 (276)
T ss_pred             cCCccccccccC--HHHHHHHHcCC------C-------CCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCC
Confidence            876643211100  11111111000      0       23367899999999999987543   345666 45554   


Q ss_pred             -CHHHHHHHHHHhCC
Q 035985          227 -SVPELAKFLNKRFP  240 (293)
Q Consensus       227 -t~~e~~~~i~~~~~  240 (293)
                       +..|+++.+.+..+
T Consensus       257 ~~~~~~~~~~~~~~~  271 (276)
T PRK05875        257 PDFSSMLEPVFGADG  271 (276)
T ss_pred             ccHHHHHHHHhhHHH
Confidence             78888877775543

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.41  E-value=5.6e-12  Score=102.49  Aligned_cols=169  Identities=24%  Similarity=0.221  Sum_probs=116.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++.+|++|++++.++++       .+|+|||+++......      .++. ..++.|+.++.++++++.    +.+
T Consensus        55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  133 (251)
T PRK12826         55 GKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWE-RVIDVNLTGTFLLTQAALPALIRAG  133 (251)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC
Confidence            358899999999998888775       6899999998764211      1122 578899999999988874    445


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       .++||++||.... ..                      +..+...|+.+|...+.+++.++.+   .+++++++||+.+
T Consensus       134 -~~~ii~~ss~~~~-~~----------------------~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~  189 (251)
T PRK12826        134 -GGRIVLTSSVAGP-RV----------------------GYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGV  189 (251)
T ss_pred             -CcEEEEEechHhh-cc----------------------CCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCC
Confidence             6799999997632 00                      1123357999999999999887654   4899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC---CCcEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA---SGRYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~---~~~y~~~~~  224 (293)
                      +|+.........+   ...+....      .       ...+++++|+++++..++..+..   +.+|++++.
T Consensus       190 ~~~~~~~~~~~~~---~~~~~~~~------~-------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  246 (251)
T PRK12826        190 DTPMAGNLGDAQW---AEAIAAAI------P-------LGRLGEPEDIAAAVLFLASDEARYITGQTLPVDGG  246 (251)
T ss_pred             CcchhhhcCchHH---HHHHHhcC------C-------CCCCcCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            9986543221111   11111110      0       12578999999999998875432   335666543

>PRK06182 short chain dehydrogenase; Validated

Probab=99.39  E-value=7.1e-12  Score=103.29  Aligned_cols=172  Identities=20%  Similarity=0.174  Sum_probs=110.8

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHH----HHHHHHHhcCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGV----VNVLKACTKTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~----~~l~~~~~~~~~   78 (293)
                      +++++++|++|++++.++++       ++|+|||+||.....      ..+.. ..++.|+.++    ..++..+++.+ 
T Consensus        47 ~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~l~~~~~~~-  124 (273)
T PRK06182         47 GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEAR-RQFEVNLFGAARLTQLVLPHMRAQR-  124 (273)
T ss_pred             CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHH-HHHhHHhHHHHHHHHHHHHHHHhcC-
Confidence            58899999999998887775       689999999975421      11223 6778898885    44455666666 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..++|++||.....+.                        .....|+.+|...+.+.+.++.+   .|++++++||+.+.
T Consensus       125 ~g~iv~isS~~~~~~~------------------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~  180 (273)
T PRK06182        125 SGRIINISSMGGKIYT------------------------PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIK  180 (273)
T ss_pred             CCEEEEEcchhhcCCC------------------------CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcc
Confidence            6799999997522111                        11236999999999988777643   48999999999998


Q ss_pred             CCCCCCCCCc--------cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEe
Q 035985          156 GPSLTPDIPS--------SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICC  222 (293)
Q Consensus       156 G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~  222 (293)
                      ++........        ........+..   .+...      .....+...+|+|++++.++........|+++
T Consensus       181 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g  246 (273)
T PRK06182        181 TEWGDIAADHLLKTSGNGAYAEQAQAVAA---SMRST------YGSGRLSDPSVIADAISKAVTARRPKTRYAVG  246 (273)
T ss_pred             cccchhhhhhhcccccccchHHHHHHHHH---HHHHh------hccccCCCHHHHHHHHHHHHhCCCCCceeecC
Confidence            7643210000        00000000000   00000      01245678999999999999876555567653

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.38  E-value=6.2e-12  Score=102.71  Aligned_cols=178  Identities=16%  Similarity=0.170  Sum_probs=115.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++.++++|++|.+++.++++       .+|++||+|+.....      ..+.. ..++.|+.++.++++++...    +
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  130 (257)
T PRK07067         52 PAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYD-RLFAVNVKGLFFLMQAVARHMVEQG  130 (257)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHH-HHHHhhhhhHHHHHHHHHHHHHhcC
Confidence            358889999999998877765       589999999875321      11223 67889999999999988642    1


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                      .-.+||++||....++.                        .+...|+.+|...+.+++.++.+   .++++++++|+.+
T Consensus       131 ~~~~iv~~sS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v  186 (257)
T PRK07067        131 RGGKIINMASQAGRRGE------------------------ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVV  186 (257)
T ss_pred             CCcEEEEeCCHHhCCCC------------------------CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcc
Confidence            12589999997533221                        23458999999999999988764   5899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~~  223 (293)
                      +++...... ..+........+..... ...+    .....+++++|+|++++.++....   .+.+|+++|
T Consensus       187 ~t~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g  252 (257)
T PRK07067        187 DTPMWDQVD-ALFARYENRPPGEKKRL-VGEA----VPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDG  252 (257)
T ss_pred             cchhhhhhh-hhhhhccCCCHHHHHHH-Hhhc----CCCCCccCHHHHHHHHHHHhCcccccccCcEEeecC
Confidence            987432110 00000000000000000 0010    013568999999999999987643   244677643

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.38  E-value=2e-11  Score=92.85  Aligned_cols=220  Identities=16%  Similarity=0.107  Sum_probs=135.7

Q ss_pred             CCCEEEEecccCC-CCCCCccccchhHH-----HHHHHHHHHHHhcCCCc-cEEEEecccchhcccccCCCCccccCCCC
Q 035985           36 RSDIVFHVATPVN-FSSDDPETDMIKPA-----IQGVVNVLKACTKTKTV-KRVILTSSAAAVSINAQNVTGLVMDEKNW  108 (293)
Q Consensus        36 ~~d~Vih~a~~~~-~~~~~~~~~~~~~n-----~~~~~~l~~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  108 (293)
                      .|++++++++... ....... ..++.+     +..+..++++..+.... +.+|.+|.++ +|.+...   ...+|+. 
T Consensus        73 sc~a~vna~g~n~l~P~rRWs-p~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva-~y~pS~s---~eY~e~~-  146 (315)
T KOG3019|consen   73 SCVAGVNAVGNNALLPIRRWS-PEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVA-VYVPSES---QEYSEKI-  146 (315)
T ss_pred             ehHHHHhhhhhhccCchhhcC-HHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeE-Eeccccc---ccccccc-
Confidence            3566666666542 1111111 233433     55578899999887643 4799999886 6655432   3466665 


Q ss_pred             CchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHH--HHHhCCccccccccc
Q 035985          109 TDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAA--TLITGNDFLLNGLKG  186 (293)
Q Consensus       109 ~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g  186 (293)
                              +....+...+--+.-|.......+  .++++++|.+.|.|.+....    -.++.  ++-.|++  +.  .|
T Consensus       147 --------~~qgfd~~srL~l~WE~aA~~~~~--~~r~~~iR~GvVlG~gGGa~----~~M~lpF~~g~GGP--lG--sG  208 (315)
T KOG3019|consen  147 --------VHQGFDILSRLCLEWEGAALKANK--DVRVALIRIGVVLGKGGGAL----AMMILPFQMGAGGP--LG--SG  208 (315)
T ss_pred             --------ccCChHHHHHHHHHHHHHhhccCc--ceeEEEEEEeEEEecCCcch----hhhhhhhhhccCCc--CC--CC
Confidence                    222223332222233333322222  58999999999999876431    12222  3323433  22  23


Q ss_pred             ccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCC---CCCC-----CCCCCcc---
Q 035985          187 MQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYK---VPTD-----FGDFPSE---  254 (293)
Q Consensus       187 ~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~---~~~~-----~~~~~~~---  254 (293)
                      .|    .++|||++|++..+..+++++...|+.|+ ..++.+..|+...+.+++++..   +|..     |.+....   
T Consensus       209 ~Q----~fpWIHv~DL~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vL  284 (315)
T KOG3019|consen  209 QQ----WFPWIHVDDLVNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVL  284 (315)
T ss_pred             Ce----eeeeeehHHHHHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEe
Confidence            33    58999999999999999999988999987 7889999999999999998532   1111     1111111   


Q ss_pred             cccccchHHHHhcCCcccc-CHHHHHHHHH
Q 035985          255 AKLILSSEKLISEGFCFKY-GIEDIYDQTV  283 (293)
Q Consensus       255 ~~~~~d~~k~~~lG~~~~~-~~~~~i~~~i  283 (293)
                      +..-.-..|++++||+.+| .+.+++++++
T Consensus       285 eGqKV~Pqral~~Gf~f~yp~vk~Al~~i~  314 (315)
T KOG3019|consen  285 EGQKVLPQRALELGFEFKYPYVKDALRAIM  314 (315)
T ss_pred             eCCcccchhHhhcCceeechHHHHHHHHHh
Confidence            2233445677779999999 6788887754

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.37  E-value=1.6e-11  Score=100.24  Aligned_cols=168  Identities=23%  Similarity=0.223  Sum_probs=113.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC--------CCCccccchhHHHHHHHHHHHHHhcC---
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS--------SDDPETDMIKPAIQGVVNVLKACTKT---   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---   76 (293)
                      .++.++.+|++|++++.++++       .+|+|||+||.....        ..... ..++.|+.++.++++++...   
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~  130 (256)
T PRK12745         52 VEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFD-RVLAINLRGPFFLTQAVAKRMLA  130 (256)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHH-HHHHhcchHHHHHHHHHHHHHHh
Confidence            368899999999988776654       589999999864321        11122 66889999999998887532   


Q ss_pred             -C-----CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEE
Q 035985           77 -K-----TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLI  147 (293)
Q Consensus        77 -~-----~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~  147 (293)
                       .     .+.+||++||....++.                        .+.+.|+.+|...|.+++.++.+   ++++++
T Consensus       131 ~~~~~~~~~~~iv~~sS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~  186 (256)
T PRK12745        131 QPEPEELPHRSIVFVSSVNAIMVS------------------------PNRGEYCISKAGLSMAAQLFAARLAEEGIGVY  186 (256)
T ss_pred             ccCcCCCCCcEEEEECChhhccCC------------------------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence             1     14679999997644322                        12358999999999999998764   589999


Q ss_pred             EEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEec
Q 035985          148 TVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICCA  223 (293)
Q Consensus       148 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~~  223 (293)
                      ++||+.+.++.....    .............     .       ...+.+++|+++++..++....   .+..|++++
T Consensus       187 ~i~pg~v~t~~~~~~----~~~~~~~~~~~~~-----~-------~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~g  249 (256)
T PRK12745        187 EVRPGLIKTDMTAPV----TAKYDALIAKGLV-----P-------MPRWGEPEDVARAVAALASGDLPYSTGQAIHVDG  249 (256)
T ss_pred             EEecCCCcCcccccc----chhHHhhhhhcCC-----C-------cCCCcCHHHHHHHHHHHhCCcccccCCCEEEECC
Confidence            999999988653221    1111111111110     0       2347789999999998886542   234566644

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.37  E-value=8.7e-12  Score=102.21  Aligned_cols=176  Identities=19%  Similarity=0.164  Sum_probs=110.8

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      ++.++.+|++|++++.++++       ++|+|||+|+.....       ..+.. ..++.|+.++.++++++.    +.+
T Consensus        59 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~  137 (264)
T PRK12829         59 KVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWE-QTLAVNLNGQFYFARAAVPLLKASG  137 (264)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhCC
Confidence            56889999999998877664       689999999976211       11123 678899999999888773    333


Q ss_pred             Cc-cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           78 TV-KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        78 ~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                       . ++|+++||.....+.                        .+...|+.+|...|.+++.++.+.   +++++++||++
T Consensus       138 -~~~~vv~~ss~~~~~~~------------------------~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~  192 (264)
T PRK12829        138 -HGGVIIALSSVAGRLGY------------------------PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGI  192 (264)
T ss_pred             -CCeEEEEecccccccCC------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCC
Confidence             3 578888876532221                        122479999999999999887653   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--C-CCcEEEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--A-SGRYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~-~~~y~~~~  223 (293)
                      ++|+......    ....... +... .....+.........+++++|+++++..++....  . +..|++++
T Consensus       193 v~~~~~~~~~----~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~  259 (264)
T PRK12829        193 VRGPRMRRVI----EARAQQL-GIGL-DEMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDG  259 (264)
T ss_pred             cCChHHHHHh----hhhhhcc-CCCh-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCC
Confidence            9998642211    1000000 0000 0000000000012458999999999988886432  2 33556644

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.36  E-value=3.1e-11  Score=98.41  Aligned_cols=170  Identities=19%  Similarity=0.174  Sum_probs=113.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------------CCCEEEEecccCCCCC--CCcc---ccchhHHHHHHHHHHHHHhcC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------------RSDIVFHVATPVNFSS--DDPE---TDMIKPAIQGVVNVLKACTKT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------------~~d~Vih~a~~~~~~~--~~~~---~~~~~~n~~~~~~l~~~~~~~   76 (293)
                      .+++++.+|++|++++.++++             ++|+|||+||......  ..+.   ...++.|+.++.++++++.+.
T Consensus        56 ~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  135 (254)
T PRK12746         56 GKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPL  135 (254)
T ss_pred             CcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            358889999999998887765             4899999998754221  1111   256679999999999988763


Q ss_pred             -CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccC
Q 035985           77 -KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPS  152 (293)
Q Consensus        77 -~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~  152 (293)
                       ....+||++||..++.+                        ..+...|+.+|...+.+++.++.+   .++++++++|+
T Consensus       136 ~~~~~~~v~~sS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg  191 (254)
T PRK12746        136 LRAEGRVINISSAEVRLG------------------------FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPG  191 (254)
T ss_pred             hhcCCEEEEECCHHhcCC------------------------CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEEC
Confidence             11358999999763321                        123357999999999998888764   47999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEec
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICCA  223 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~~  223 (293)
                      .+.++........  ..+........             ....+++++|+++++..++..+.   .+..|++++
T Consensus       192 ~~~t~~~~~~~~~--~~~~~~~~~~~-------------~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~  250 (254)
T PRK12746        192 YTKTDINAKLLDD--PEIRNFATNSS-------------VFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSG  250 (254)
T ss_pred             CccCcchhhhccC--hhHHHHHHhcC-------------CcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCC
Confidence            9988743211000  00111111110             02346789999999998887643   244676643

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.35  E-value=2.1e-11  Score=99.19  Aligned_cols=170  Identities=18%  Similarity=0.195  Sum_probs=113.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++++|++|++++.++++       ++|+|||+++......      .+.. ..+..|+.++.++.+++    ++.+
T Consensus        53 ~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  131 (252)
T PRK06138         53 GRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWD-AVMRVNVGGVFLWAKYAIPIMQRQG  131 (252)
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHhhhhhhHHHHHHHHHHHHHhcC
Confidence            358899999999998887764       6899999999754211      1122 56789999987766654    4555


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       .++||++||....++..                        ....|+.+|...+.+++.++.+.   +++++++||+.+
T Consensus       132 -~~~ii~~sS~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~  186 (252)
T PRK06138        132 -GGSIVNTASQLALAGGR------------------------GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTI  186 (252)
T ss_pred             -CeEEEEECChhhccCCC------------------------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCc
Confidence             68999999986444322                        23579999999999999987654   899999999999


Q ss_pred             cCCCCCCCCCcc--HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CCcE-EEec
Q 035985          155 SGPSLTPDIPSS--VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SGRY-ICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~~y-~~~~  223 (293)
                      +++.........  ...+........             ....+++++|++++++.++.++..  .|.+ .+.+
T Consensus       187 ~t~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  247 (252)
T PRK06138        187 DTPYFRRIFARHADPEALREALRARH-------------PMNRFGTAEEVAQAALFLASDESSFATGTTLVVDG  247 (252)
T ss_pred             cCcchhhhhccccChHHHHHHHHhcC-------------CCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            887532211000  000111111000             012378899999999999987643  2444 5543

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.35  E-value=1.5e-11  Score=99.79  Aligned_cols=168  Identities=18%  Similarity=0.114  Sum_probs=111.7

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC--CC-----CccccchhHHHHHHHHHHHHHhcC-----
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS--SD-----DPETDMIKPAIQGVVNVLKACTKT-----   76 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~--~~-----~~~~~~~~~n~~~~~~l~~~~~~~-----   76 (293)
                      ++.++.+|++|.+++.++++       .+|+|||+|+.....  ..     +.. ..++.|+.++.++++++.+.     
T Consensus        53 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  131 (248)
T PRK06123         53 EALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLT-RIFATNVVGSFLCAREAVKRMSTRH  131 (248)
T ss_pred             cEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            57889999999998887765       589999999875321  11     122 66889999999988877542     


Q ss_pred             -CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccC
Q 035985           77 -KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPS  152 (293)
Q Consensus        77 -~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~  152 (293)
                       +.-.++|++||...+++.+.                       ....|+.+|...+.+++.++.+.   +++++++||+
T Consensus       132 ~~~~g~iv~~sS~~~~~~~~~-----------------------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg  188 (248)
T PRK06123        132 GGRGGAIVNVSSMAARLGSPG-----------------------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPG  188 (248)
T ss_pred             CCCCeEEEEECchhhcCCCCC-----------------------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecC
Confidence             11236999999765543221                       11259999999999999887764   8999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEec
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICCA  223 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~~  223 (293)
                      .++++......   .........+... +            .-+.+++|++++++.++....   .+..|+++|
T Consensus       189 ~v~~~~~~~~~---~~~~~~~~~~~~p-~------------~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        189 VIYTEIHASGG---EPGRVDRVKAGIP-M------------GRGGTAEEVARAILWLLSDEASYTTGTFIDVSG  246 (248)
T ss_pred             cccCchhhccC---CHHHHHHHHhcCC-C------------CCCcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence            99998533211   1111121111111 1            112468999999999887542   233565543

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.34  E-value=2.9e-11  Score=99.64  Aligned_cols=186  Identities=14%  Similarity=0.072  Sum_probs=116.9

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC--CCCc---cccchhHHHHHHHHHHHHHh----cCCCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS--SDDP---ETDMIKPAIQGVVNVLKACT----KTKTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~--~~~~---~~~~~~~n~~~~~~l~~~~~----~~~~~   79 (293)
                      ++.++.+|++|++++.++++       .+|+|||+||.....  ...+   .+..++.|+.++.++++++.    +.+..
T Consensus        56 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~  135 (275)
T PRK05876         56 DVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTG  135 (275)
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Confidence            57889999999998887764       479999999975311  1111   12567899999999888874    33323


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      .++|++||...+.                        +..+...|+.+|...+.+.+.++.+   .|+++++++|+.+.+
T Consensus       136 g~iv~isS~~~~~------------------------~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t  191 (275)
T PRK05876        136 GHVVFTASFAGLV------------------------PNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVET  191 (275)
T ss_pred             CEEEEeCChhhcc------------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccc
Confidence            6899999976332                        1123458999999866666665543   389999999998877


Q ss_pred             CCCCCCCCccHHHHHHHHhCC-cccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHH
Q 035985          157 PSLTPDIPSSVALAATLITGN-DFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFL  235 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i  235 (293)
                      +.....     ........+. ........    ....+++++++|+|+.++.++.++   ..|++. ......++.+.+
T Consensus       192 ~~~~~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~dva~~~~~ai~~~---~~~~~~-~~~~~~~~~~~~  258 (275)
T PRK05876        192 NLVANS-----ERIRGAACAQSSTTGSPGP----LPLQDDNLGVDDIAQLTADAILAN---RLYVLP-HAASRASIRRRF  258 (275)
T ss_pred             ccccch-----hhhcCcccccccccccccc----ccccccCCCHHHHHHHHHHHHHcC---CeEEec-ChhhHHHHHHHH
Confidence            643211     0000000000 00000000    012467899999999999998754   245444 334555565555


Q ss_pred             HHh
Q 035985          236 NKR  238 (293)
Q Consensus       236 ~~~  238 (293)
                      .+.
T Consensus       259 ~~~  261 (275)
T PRK05876        259 ERI  261 (275)
T ss_pred             HHH
Confidence            554

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.33  E-value=2.9e-11  Score=98.30  Aligned_cols=169  Identities=17%  Similarity=0.127  Sum_probs=112.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCcc---ccchhHHHHHHHHHHHHHhc----CCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDPE---TDMIKPAIQGVVNVLKACTK----TKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~~---~~~~~~n~~~~~~l~~~~~~----~~~   78 (293)
                      .++.++.+|++|++++.++++       .+|+|||+|+......  ..+.   ...+..|+.++..+++++..    .+ 
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-  132 (250)
T PRK08063         54 RKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-  132 (250)
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            358889999999998887765       4899999998653211  1111   13577899999988888764    33 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      .++||++||.....+                        ..+...|+.+|...|.+++.++.+   .++++++++|+.+.
T Consensus       133 ~g~iv~~sS~~~~~~------------------------~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~  188 (250)
T PRK08063        133 GGKIISLSSLGSIRY------------------------LENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVD  188 (250)
T ss_pred             CeEEEEEcchhhccC------------------------CCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCccc
Confidence            569999999753221                        123458999999999999988765   48999999999997


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~-~y~~~~  223 (293)
                      .+..... ... ..+........      .       ...+++.+|++++++.++..+..  .| .++++|
T Consensus       189 t~~~~~~-~~~-~~~~~~~~~~~------~-------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  244 (250)
T PRK08063        189 TDALKHF-PNR-EELLEDARAKT------P-------AGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDG  244 (250)
T ss_pred             Cchhhhc-cCc-hHHHHHHhcCC------C-------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            7643211 111 11111111110      0       12368899999999999876432  34 456644

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.33  E-value=3.3e-11  Score=97.56  Aligned_cols=166  Identities=24%  Similarity=0.274  Sum_probs=114.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++.+|++|++++.++++       .+|+|||+++......      .... ..+..|+.+..++++++.    +.+
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~l~~~~  132 (246)
T PRK05653         54 GEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWD-RVIDVNLTGTFNVVRAALPPMIKAR  132 (246)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            368889999999998877765       4699999998754321      1112 567889999999888874    455


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       +++||++||....++.                        .+...|+.+|...+.+++.++++   .+++++++||+.+
T Consensus       133 -~~~ii~~ss~~~~~~~------------------------~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~  187 (246)
T PRK05653        133 -YGRIVNISSVSGVTGN------------------------PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFI  187 (246)
T ss_pred             -CcEEEEECcHHhccCC------------------------CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCc
Confidence             6899999997533211                        23357999999999999888764   3899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~-~y~~~~  223 (293)
                      +++....    ............   +   .       ...+++++|+++++..++.....  .+ .|.++|
T Consensus       188 ~~~~~~~----~~~~~~~~~~~~---~---~-------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  242 (246)
T PRK05653        188 DTDMTEG----LPEEVKAEILKE---I---P-------LGRLGQPEEVANAVAFLASDAASYITGQVIPVNG  242 (246)
T ss_pred             CCcchhh----hhHHHHHHHHhc---C---C-------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence            9876432    111111111111   1   1       25578899999999999875332  33 556644

>PRK06194 hypothetical protein; Provisional

Probab=99.32  E-value=1.1e-11  Score=102.88  Aligned_cols=170  Identities=15%  Similarity=0.105  Sum_probs=109.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHH----HhcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKA----CTKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~----~~~~~   77 (293)
                      .++.++.+|++|.+++.++++       .+|+|||+||......      .++. ..++.|+.++.+++++    ..+.+
T Consensus        55 ~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~  133 (287)
T PRK06194         55 AEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWE-WVLGVNLWGVIHGVRAFTPLMLAAA  133 (287)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHhhccHHHHHHHHHHHHHHHhcC
Confidence            357889999999998888775       4799999999864321      1122 5678999999887666    34433


Q ss_pred             C-----ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCC-----ceEE
Q 035985           78 T-----VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENN-----IDLI  147 (293)
Q Consensus        78 ~-----~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~-----~~~~  147 (293)
                      .     ..++|++||...+++.                        .+...|+.+|...+.+++.++.+.+     +++.
T Consensus       134 ~~~~~~~g~iv~~sS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~  189 (287)
T PRK06194        134 EKDPAYEGHIVNTASMAGLLAP------------------------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGAS  189 (287)
T ss_pred             CCCCCCCeEEEEeCChhhccCC------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEE
Confidence            1     1589999998644321                        1235799999999999998877643     5666


Q ss_pred             EEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCC
Q 035985          148 TVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTS  227 (293)
Q Consensus       148 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t  227 (293)
                      .+.|+.+..+-.            ....+.+..+...+     ...++|++++|++..+....              .++
T Consensus       190 ~v~pg~i~t~~~------------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~--------------~~s  238 (287)
T PRK06194        190 VLCPYFVPTGIW------------QSERNRPADLANTA-----PPTRSQLIAQAMSQKAVGSG--------------KVT  238 (287)
T ss_pred             EEEeCcccCccc------------cccccCchhcccCc-----cccchhhHHHHHHHhhhhcc--------------CCC
Confidence            666655433211            11122222222211     23577888888877653221              167


Q ss_pred             HHHHHHHHHHhCC
Q 035985          228 VPELAKFLNKRFP  240 (293)
Q Consensus       228 ~~e~~~~i~~~~~  240 (293)
                      ..|+++.+.+...
T Consensus       239 ~~dva~~i~~~~~  251 (287)
T PRK06194        239 AEEVAQLVFDAIR  251 (287)
T ss_pred             HHHHHHHHHHHHH
Confidence            8888888777653

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.31  E-value=2.4e-11  Score=98.83  Aligned_cols=171  Identities=15%  Similarity=0.078  Sum_probs=113.7

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCc---cccchhHHHHHHHHHHHHHhcC-CCccEE
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDP---ETDMIKPAIQGVVNVLKACTKT-KTVKRV   82 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~---~~~~~~~n~~~~~~l~~~~~~~-~~~~~~   82 (293)
                      ++.++.+|+++++++.++++       ++|+|||+||......  ...   .+..++.|+.++.++++++.+. ....+|
T Consensus        57 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~i  136 (252)
T PRK06077         57 EGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAI  136 (252)
T ss_pred             eeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEE
Confidence            56788899999988776654       5899999999643211  111   1256788999999998888754 113589


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccCCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSGPSLT  160 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~  160 (293)
                      |++||...+.                        +..+.+.|+.+|...|.+++.++++.  ++.+.+++|+.+.++...
T Consensus       137 v~~sS~~~~~------------------------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~  192 (252)
T PRK06077        137 VNIASVAGIR------------------------PAYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGE  192 (252)
T ss_pred             EEEcchhccC------------------------CCCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHH
Confidence            9999976321                        22344689999999999999988775  689999999998776421


Q ss_pred             CCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEEec
Q 035985          161 PDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYICCA  223 (293)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~~~  223 (293)
                      ... .............   +         .....+++++|+|++++.++..+.. +.+|++++
T Consensus       193 ~~~-~~~~~~~~~~~~~---~---------~~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~  243 (252)
T PRK06077        193 SLF-KVLGMSEKEFAEK---F---------TLMGKILDPEEVAEFVAAILKIESITGQVFVLDS  243 (252)
T ss_pred             hhh-hcccccHHHHHHh---c---------CcCCCCCCHHHHHHHHHHHhCccccCCCeEEecC
Confidence            100 0000000000000   0         0124689999999999999976544 45777643

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.31  E-value=2.4e-11  Score=98.50  Aligned_cols=168  Identities=18%  Similarity=0.211  Sum_probs=114.1

Q ss_pred             CeEEEecCCCCCcchhhhhc---CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC----CCccEE
Q 035985           16 ELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT----KTVKRV   82 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~   82 (293)
                      ++.++.+|+++.+.+.++++   .+|+|||+|+......      .+.. ..+..|+.++.++++++.+.    +...+|
T Consensus        54 ~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i  132 (245)
T PRK07060         54 GCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFD-RVMAVNARGAALVARHVARAMIAAGRGGSI  132 (245)
T ss_pred             CCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcCCCcEE
Confidence            46788999999988888775   4899999998754211      1122 56778999999999887643    213689


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSL  159 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~  159 (293)
                      |++||...+++.                        .+...|+.+|...|.+++.++.+.   +++++.+||+.++++..
T Consensus       133 v~~sS~~~~~~~------------------------~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~  188 (245)
T PRK07060        133 VNVSSQAALVGL------------------------PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMA  188 (245)
T ss_pred             EEEccHHHcCCC------------------------CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchh
Confidence            999998644321                        123479999999999999887653   79999999999998764


Q ss_pred             CCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CCc-EEEec
Q 035985          160 TPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SGR-YICCA  223 (293)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~~-y~~~~  223 (293)
                      ......  ......+...   .   .       ...+++++|++++++.++..+..  .|. +++++
T Consensus       189 ~~~~~~--~~~~~~~~~~---~---~-------~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK07060        189 AEAWSD--PQKSGPMLAA---I---P-------LGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDG  240 (245)
T ss_pred             hhhccC--HHHHHHHHhc---C---C-------CCCCCCHHHHHHHHHHHcCcccCCccCcEEeECC
Confidence            321111  0000111100   0   1       24588999999999999976532  344 45544

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.31  E-value=4e-11  Score=97.78  Aligned_cols=167  Identities=19%  Similarity=0.216  Sum_probs=112.7

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCc---cccchhHHHHHHHHHHHHHhcC----CCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDP---ETDMIKPAIQGVVNVLKACTKT----KTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~---~~~~~~~n~~~~~~l~~~~~~~----~~~   79 (293)
                      ++.++++|++|.+++.++++       .+|+|||+|+......  ..+   .+..+..|+.++.++++++.+.    + .
T Consensus        60 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  138 (255)
T PRK07523         60 SAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-A  138 (255)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-C
Confidence            57889999999998888765       4899999999754221  111   1256779999999999988643    4 5


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      +++|++||.....                        +......|+.+|...+.+++.++.+   +|++++++||+.+.+
T Consensus       139 g~iv~iss~~~~~------------------------~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t  194 (255)
T PRK07523        139 GKIINIASVQSAL------------------------ARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDT  194 (255)
T ss_pred             eEEEEEccchhcc------------------------CCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccC
Confidence            7999999975221                        1123458999999999999988763   489999999999988


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CC-cEEEe
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SG-RYICC  222 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~-~y~~~  222 (293)
                      +........  ..+...+... .+            ...+..++|+|++++.++.....  .| .++++
T Consensus       195 ~~~~~~~~~--~~~~~~~~~~-~~------------~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~  248 (255)
T PRK07523        195 PLNAALVAD--PEFSAWLEKR-TP------------AGRWGKVEELVGACVFLASDASSFVNGHVLYVD  248 (255)
T ss_pred             chhhhhccC--HHHHHHHHhc-CC------------CCCCcCHHHHHHHHHHHcCchhcCccCcEEEEC
Confidence            753211100  1111111111 11            13367799999999999875432  24 55654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.31  E-value=6e-11  Score=96.45  Aligned_cols=169  Identities=18%  Similarity=0.186  Sum_probs=111.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      ++.++++|++|++++.++++       .+|+|||+|+......       .+.. ..++.|+.++..+++.+.    +.+
T Consensus        54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  132 (251)
T PRK07231         54 RAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFD-RIFAVNVKSPYLWTQAAVPAMRGEG  132 (251)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHH-HHHhhhhHHHHHHHHHHHHHHHhcC
Confidence            57899999999999887764       5799999998743111       1122 578889988777776665    345


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       .++||++||...+.+                        ..+...|+.+|...+.+++.++.++   +++++.++|+.+
T Consensus       133 -~~~iv~~sS~~~~~~------------------------~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~  187 (251)
T PRK07231        133 -GGAIVNVASTAGLRP------------------------RPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVV  187 (251)
T ss_pred             -CcEEEEEcChhhcCC------------------------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECcc
Confidence             689999999864332                        1234589999999999998887653   799999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE-EEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY-ICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y-~~~~  223 (293)
                      .++...................      ...       ...+++++|+|++++.++....  ..|.+ .+.|
T Consensus       188 ~t~~~~~~~~~~~~~~~~~~~~------~~~-------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g  246 (251)
T PRK07231        188 ETGLLEAFMGEPTPENRAKFLA------TIP-------LGRLGTPEDIANAALFLASDEASWITGVTLVVDG  246 (251)
T ss_pred             CCCcchhhhcccChHHHHHHhc------CCC-------CCCCcCHHHHHHHHHHHhCccccCCCCCeEEECC
Confidence            6653221100000011111000      001       2457899999999999997543  23554 5543

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.30  E-value=5.1e-11  Score=96.74  Aligned_cols=154  Identities=22%  Similarity=0.218  Sum_probs=109.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh-----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT-----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~-----~~   76 (293)
                      .++.++.+|++|++.+.++++       ++|+|||+||.....      ..+.. ..++.|+.++.++++++.     +.
T Consensus        59 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  137 (249)
T PRK12827         59 GKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWD-DVIDVNLDGFFNVTQAALPPMIRAR  137 (249)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhhHHHHHHHHHHHHHHhcC
Confidence            368899999999998887763       589999999975421      11122 567899999999999987     44


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + .++||++||...+++..                        +...|+.+|...+.+++.++.+.   +++++++||+.
T Consensus       138 ~-~~~iv~~sS~~~~~~~~------------------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~  192 (249)
T PRK12827        138 R-GGRIVNIASVAGVRGNR------------------------GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGA  192 (249)
T ss_pred             C-CeEEEEECCchhcCCCC------------------------CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECC
Confidence            5 67999999986444321                        23479999999999988887653   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +.++......   ..   .......      +       ...+.+.+|+++++..++...
T Consensus       193 v~t~~~~~~~---~~---~~~~~~~------~-------~~~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        193 INTPMADNAA---PT---EHLLNPV------P-------VQRLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             cCCCcccccc---hH---HHHHhhC------C-------CcCCcCHHHHHHHHHHHcCcc
Confidence            9987543221   10   1111000      0       122457899999999888653

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.30  E-value=7.1e-11  Score=94.50  Aligned_cols=161  Identities=19%  Similarity=0.183  Sum_probs=106.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc---CCCEEEEecccCCCCC-C--Cc--cccchhHHHHHH----HHHHHHHhcCCCccEE
Q 035985           15 GELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNFSS-D--DP--ETDMIKPAIQGV----VNVLKACTKTKTVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~~-~--~~--~~~~~~~n~~~~----~~l~~~~~~~~~~~~~   82 (293)
                      ++++++++|++|++.+.++++   ++|+|||+++...... .  ++  ....+..|+.+.    .++++++++.+  +++
T Consensus        47 ~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~  124 (227)
T PRK08219         47 PGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHV  124 (227)
T ss_pred             ccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeE
Confidence            368899999999999998886   5999999998754221 0  11  114467777774    44555555443  689


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-C-ceEEEEccCCccCCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-N-IDLITVIPSLMSGPSLT  160 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-~-~~~~ilR~~~v~G~~~~  160 (293)
                      |++||..++.+.                        .+...|+.+|...+.+++.++.+. + +++..++|+.+.++...
T Consensus       125 v~~ss~~~~~~~------------------------~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~  180 (227)
T PRK08219        125 VFINSGAGLRAN------------------------PGWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQR  180 (227)
T ss_pred             EEEcchHhcCcC------------------------CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhh
Confidence            999997643211                        123479999999999888876543 4 88999998876543211


Q ss_pred             CCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEe
Q 035985          161 PDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICC  222 (293)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~  222 (293)
                              .+... .+..            .....+++++|++++++.+++.+..+.+|++.
T Consensus       181 --------~~~~~-~~~~------------~~~~~~~~~~dva~~~~~~l~~~~~~~~~~~~  221 (227)
T PRK08219        181 --------GLVAQ-EGGE------------YDPERYLRPETVAKAVRFAVDAPPDAHITEVV  221 (227)
T ss_pred             --------hhhhh-hccc------------cCCCCCCCHHHHHHHHHHHHcCCCCCccceEE
Confidence                    00000 0100            01356899999999999999887555566543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.30  E-value=1.1e-10  Score=95.43  Aligned_cols=168  Identities=18%  Similarity=0.160  Sum_probs=107.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-------CCCCccccchhHHHHHHHHHHHH----HhcC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-------SSDDPETDMIKPAIQGVVNVLKA----CTKT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~----~~~~   76 (293)
                      .++.++++|++|.+++.++++       ++|++||+||....       ...+.. ..++.|+.++..+++.    +++.
T Consensus        56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~  134 (260)
T PRK12823         56 GEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIE-AEIRRSLFPTLWCCRAVLPHMLAQ  134 (260)
T ss_pred             CeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHH-HHHHHHhHHHHHHHHHHHHHHHhc
Confidence            357889999999987776654       58999999985321       111122 5567888777655544    4455


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..+||++||... ++.                         +...|+.+|...+.+++.++.+.   ++++++++|++
T Consensus       135 ~-~g~iv~~sS~~~-~~~-------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~  187 (260)
T PRK12823        135 G-GGAIVNVSSIAT-RGI-------------------------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGG  187 (260)
T ss_pred             C-CCeEEEEcCccc-cCC-------------------------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCc
Confidence            5 578999999753 211                         12379999999999999988765   89999999999


Q ss_pred             ccCCCCC---------CCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEE
Q 035985          154 MSGPSLT---------PDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYIC  221 (293)
Q Consensus       154 v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~  221 (293)
                      ++++...         .........+.........             ..-+.+++|++++++.++....  ..| .+++
T Consensus       188 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v  254 (260)
T PRK12823        188 TEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSL-------------MKRYGTIDEQVAAILFLASDEASYITGTVLPV  254 (260)
T ss_pred             cCCcchhhHHhhccccccccccHHHHHHHHhccCC-------------cccCCCHHHHHHHHHHHcCcccccccCcEEee
Confidence            9997311         0000111222222111111             1124568999999999886542  233 5566


Q ss_pred             ec
Q 035985          222 CA  223 (293)
Q Consensus       222 ~~  223 (293)
                      +|
T Consensus       255 ~g  256 (260)
T PRK12823        255 GG  256 (260)
T ss_pred             cC
Confidence            44

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.30  E-value=7.4e-11  Score=95.90  Aligned_cols=162  Identities=17%  Similarity=0.122  Sum_probs=111.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC---------CCCccccchhHHHHHHHHHHHHHhcC---
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS---------SDDPETDMIKPAIQGVVNVLKACTKT---   76 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---   76 (293)
                      ++..+.+|++|.+++.++++       .+|+|||+||.....         ..... ..+..|+.++.++++++...   
T Consensus        56 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~  134 (250)
T PRK07774         56 TAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYK-KFMSVNLDGALVCTRAVYKHMAK  134 (250)
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHH-HHHhhhhHHHHHHHHHHHHHHHH
Confidence            57789999999988776654       589999999974311         11122 56789999999998888743   


Q ss_pred             -CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccC
Q 035985           77 -KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPS  152 (293)
Q Consensus        77 -~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~  152 (293)
                       + .++||++||...+.                           +.+.|+.+|...|.+++.+++++   ++++++++|+
T Consensus       135 ~~-~~~iv~~sS~~~~~---------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg  186 (250)
T PRK07774        135 RG-GGAIVNQSSTAAWL---------------------------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPG  186 (250)
T ss_pred             hC-CcEEEEEecccccC---------------------------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecC
Confidence             3 46999999976321                           23479999999999999988764   7999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHH-HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEec
Q 035985          153 LMSGPSLTPDIPSSVALAATL-ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICCA  223 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~~  223 (293)
                      .+..+......+   ..+.+. ..+.+              ..-+.+++|++++++.++....   .+..|++++
T Consensus       187 ~~~t~~~~~~~~---~~~~~~~~~~~~--------------~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~  244 (250)
T PRK07774        187 PIDTEATRTVTP---KEFVADMVKGIP--------------LSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDG  244 (250)
T ss_pred             cccCccccccCC---HHHHHHHHhcCC--------------CCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECC
Confidence            887765432111   111111 11111              1124568999999999887642   234667643

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.30  E-value=3.6e-11  Score=98.93  Aligned_cols=173  Identities=18%  Similarity=0.128  Sum_probs=113.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .+++++++|++|++++.++++       .+|+|||+||......      .+.. ..++.|+.++.++++++    ++.+
T Consensus        45 ~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~g~~~~~~~~~~~~~~~~  123 (270)
T PRK06179         45 PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQ-ALFDTNVFGILRMTRAVLPHMRAQG  123 (270)
T ss_pred             CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            468999999999999888775       4799999999754221      1123 67889999988888874    4556


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       .++||++||...+.+.                        .....|+.+|...+.+++.++.+   .|+++++++|+.+
T Consensus       124 -~~~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~  178 (270)
T PRK06179        124 -SGRIINISSVLGFLPA------------------------PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYT  178 (270)
T ss_pred             -CceEEEECCccccCCC------------------------CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCc
Confidence             7899999997533211                        12347999999999998887654   4899999999999


Q ss_pred             cCCCCCCCCCc--cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE
Q 035985          155 SGPSLTPDIPS--SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC  221 (293)
Q Consensus       155 ~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~  221 (293)
                      .++........  .+.............+.        .........+|+++.++.++..+.....|..
T Consensus       179 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~va~~~~~~~~~~~~~~~~~~  239 (270)
T PRK06179        179 KTNFDANAPEPDSPLAEYDRERAVVSKAVA--------KAVKKADAPEVVADTVVKAALGPWPKMRYTA  239 (270)
T ss_pred             ccccccccCCCCCcchhhHHHHHHHHHHHH--------hccccCCCHHHHHHHHHHHHcCCCCCeeEec
Confidence            88753321100  01000000000000000        0011235689999999999987665556654

>PRK06128 oxidoreductase; Provisional

Probab=99.30  E-value=1.2e-10  Score=97.24  Aligned_cols=169  Identities=16%  Similarity=0.136  Sum_probs=114.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-------CCCCccccchhHHHHHHHHHHHHHhcC-CCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-------SSDDPETDMIKPAIQGVVNVLKACTKT-KTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~   79 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||....       +.++.. ..+++|+.++..+++++... ..-
T Consensus       106 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~  184 (300)
T PRK06128        106 RKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFD-ATFKTNVYAMFWLCKAAIPHLPPG  184 (300)
T ss_pred             CeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHhcCcC
Confidence            357889999999988877664       68999999996421       111223 78899999999999998753 112


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      .+||++||...+.+.                        .....|+.+|...+.+++.++.+   .|+++++++|+.+.+
T Consensus       185 ~~iv~~sS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t  240 (300)
T PRK06128        185 ASIINTGSIQSYQPS------------------------PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWT  240 (300)
T ss_pred             CEEEEECCccccCCC------------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcC
Confidence            589999998643211                        12247999999999999998876   489999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC---CCcEEEec
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA---SGRYICCA  223 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~---~~~y~~~~  223 (293)
                      +......  ........+... ..            ...+.+.+|++.+++.++.....   +..|+++|
T Consensus       241 ~~~~~~~--~~~~~~~~~~~~-~p------------~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~g  295 (300)
T PRK06128        241 PLQPSGG--QPPEKIPDFGSE-TP------------MKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTG  295 (300)
T ss_pred             CCcccCC--CCHHHHHHHhcC-CC------------CCCCcCHHHHHHHHHHHhCccccCccCcEEeeCC
Confidence            8532211  111111111111 10            12356799999999988875432   33566643

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.29  E-value=1.7e-11  Score=100.22  Aligned_cols=177  Identities=16%  Similarity=0.064  Sum_probs=111.7

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC--CCCc---cccchhHHHHHHHHHHHHHhc----CCCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS--SDDP---ETDMIKPAIQGVVNVLKACTK----TKTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~--~~~~---~~~~~~~n~~~~~~l~~~~~~----~~~~   79 (293)
                      ++.++.+|++|.+++.++++       .+|+|||+||.....  ...+   ....++.|+.++..+++++..    .+.-
T Consensus        54 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  133 (259)
T PRK12384         54 MAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQ  133 (259)
T ss_pred             eeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCC
Confidence            58899999999988776654       579999999865321  1111   125678899998877776643    3312


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH---hCCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ---ENNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~---~~~~~~~ilR~~~v~G  156 (293)
                      .++|++||....++..                        ....|+.+|...+.+++.++.   ..|+++.++||+.+++
T Consensus       134 ~~iv~~ss~~~~~~~~------------------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~  189 (259)
T PRK12384        134 GRIIQINSKSGKVGSK------------------------HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLK  189 (259)
T ss_pred             cEEEEecCcccccCCC------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCccc
Confidence            5899999865333211                        224799999999999888875   3589999999999887


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccc-c-ccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEec
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLL-N-GLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICCA  223 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~~  223 (293)
                      +....   ..+..+........... . ...+    .....+++++|++++++.++.+..   .+..|++++
T Consensus       190 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~  254 (259)
T PRK12384        190 SPMFQ---SLLPQYAKKLGIKPDEVEQYYIDK----VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTG  254 (259)
T ss_pred             chhhh---hhhHHHHHhcCCChHHHHHHHHHh----CcccCCCCHHHHHHHHHHHcCcccccccCceEEEcC
Confidence            64322   12221111100000000 0 0000    113568899999999998877543   234677654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.29  E-value=3.3e-11  Score=97.21  Aligned_cols=157  Identities=22%  Similarity=0.281  Sum_probs=110.0

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      +++++.+|+.|.+++.++++       ++|+|||+++......      .... +.+..|+.++.++++++.    +.+ 
T Consensus        55 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~-  132 (239)
T PRK12828         55 ALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWD-RMYGVNVKTTLNASKAALPALTASG-  132 (239)
T ss_pred             CceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHH-HHHHhhchhHHHHHHHHHHHHHhcC-
Confidence            57888999999988877765       5899999998653211      1112 557789999999888774    345 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      +++||++||...+.+                        ..+...|+.+|...+.+++.++..   .++++.++||++++
T Consensus       133 ~~~iv~~sS~~~~~~------------------------~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~  188 (239)
T PRK12828        133 GGRIVNIGAGAALKA------------------------GPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIID  188 (239)
T ss_pred             CCEEEEECchHhccC------------------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence            789999999864321                        112357999999999888877654   48999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~-~y~~~~  223 (293)
                      ++.....                  .....       ...+++++|+++++..++.+...  .| .+.++|
T Consensus       189 ~~~~~~~------------------~~~~~-------~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g  234 (239)
T PRK12828        189 TPPNRAD------------------MPDAD-------FSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDG  234 (239)
T ss_pred             Ccchhhc------------------CCchh-------hhcCCCHHHHHHHHHHHhCcccccccceEEEecC
Confidence            8732110                  00000       23478999999999999986532  24 445543

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.28  E-value=3.8e-11  Score=97.73  Aligned_cols=166  Identities=17%  Similarity=0.123  Sum_probs=110.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++..+++|+++.+++.++++       .+|+|||+|+......      .++. ..++.|+.++..+++++..    .+
T Consensus        48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  126 (252)
T PRK08220         48 YPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQ-QTFAVNAGGAFNLFRAVMPQFRRQR  126 (252)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhCC
Confidence            368889999999998888765       3799999999754211      1223 6788999999999988752    34


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||.....                        +..+...|+.+|...+.+++.++.+   .++++++++|+.+
T Consensus       127 -~g~iv~~ss~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v  181 (252)
T PRK08220        127 -SGAIVTVGSNAAHV------------------------PRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGST  181 (252)
T ss_pred             -CCEEEEECCchhcc------------------------CCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcC
Confidence             46899999975321                        1123458999999999999888776   5899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +++.......... .......+....+...      .....+++++|+|++++.++...
T Consensus       182 ~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        182 DTDMQRTLWVDED-GEQQVIAGFPEQFKLG------IPLGKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             cchhhhhhccchh-hhhhhhhhHHHHHhhc------CCCcccCCHHHHHHHHHHHhcch
Confidence            9875321100000 0000000000000000      01245789999999999988754

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.27  E-value=1.4e-10  Score=94.28  Aligned_cols=171  Identities=19%  Similarity=0.201  Sum_probs=112.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC---CCc--cccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS---DDP--ETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~---~~~--~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .+++++.+|++|.++++++++       ++|+|||+|+......   ...  .+..++.|+.++.++++++.    +.+ 
T Consensus        52 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-  130 (250)
T TIGR03206        52 GNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-  130 (250)
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            468899999999998887764       5899999998643111   111  12568899999999888775    445 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      .+++|++||...+.+..                        ....|+.+|...+.+++.++.+.   +++++++||+.++
T Consensus       131 ~~~ii~iss~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~  186 (250)
T TIGR03206       131 AGRIVNIASDAARVGSS------------------------GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTD  186 (250)
T ss_pred             CeEEEEECchhhccCCC------------------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCccc
Confidence            67999999986443221                        22479999999999998887664   8999999999998


Q ss_pred             CCCCCCCCC--ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDIP--SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ++.......  .....+.........             ..-+...+|+|+++..++..+.  ..| .+.+++
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  246 (250)
T TIGR03206       187 TALLDDICGGAENPEKLREAFTRAIP-------------LGRLGQPDDLPGAILFFSSDDASFITGQVLSVSG  246 (250)
T ss_pred             chhHHhhhhccCChHHHHHHHHhcCC-------------ccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCC
Confidence            874221100  000111111111110             1224568999999999887543  223 555543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.27  E-value=8.2e-11  Score=96.12  Aligned_cols=179  Identities=17%  Similarity=0.191  Sum_probs=116.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-C---CccccchhHHHHHHHHHHHHHhc---CCCcc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-D---DPETDMIKPAIQGVVNVLKACTK---TKTVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-~---~~~~~~~~~n~~~~~~l~~~~~~---~~~~~   80 (293)
                      .++.++.+|+++++++.++++       ++|+|||+||...... .   +..+..++.|+.+..++++.+..   .+ ..
T Consensus        55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~  133 (258)
T PRK08628         55 PRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RG  133 (258)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-Cc
Confidence            468899999999998887765       5899999999643211 1   11125678899999888887753   23 36


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~  157 (293)
                      +||++||....++.                        .+...|+.+|...+.+++.++.+   .+++++.++|+.++++
T Consensus       134 ~iv~~ss~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~  189 (258)
T PRK08628        134 AIVNISSKTALTGQ------------------------GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTP  189 (258)
T ss_pred             EEEEECCHHhccCC------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCH
Confidence            89999997644321                        13358999999999999998754   4899999999999987


Q ss_pred             CCCCCCCcc--HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEeccCCCHHH
Q 035985          158 SLTPDIPSS--VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAVNTSVPE  230 (293)
Q Consensus       158 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~~~t~~e  230 (293)
                      .........  .......+...   ++.         ...++..+|++++++.++....  ..| .+.++|....+++
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~---~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        190 LYENWIATFDDPEAKLAAITAK---IPL---------GHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             HHHHHhhhccCHHHHHHHHHhc---CCc---------cccCCCHHHHHHHHHHHhChhhccccCceEEecCCcccccc
Confidence            422100000  00001111110   000         1246779999999999987643  234 4555555554444

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.26  E-value=1e-10  Score=93.79  Aligned_cols=170  Identities=20%  Similarity=0.139  Sum_probs=113.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc---CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEe
Q 035985           15 GELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILT   85 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~   85 (293)
                      .+++++.+|++|++++.++++   .+|++||+++.....      ..+.. .+++.|+.++.+++++....+ ..++|++
T Consensus        45 ~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~g~iv~~  122 (230)
T PRK07041         45 APVRTAALDITDEAAVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQ-AAMDSKFWGAYRVARAARIAP-GGSLTFV  122 (230)
T ss_pred             CceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHHHHHHHHHhhhhhcC-CeEEEEE
Confidence            468899999999999988886   479999999875321      11223 678899999999999666555 6899999


Q ss_pred             cccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-CceEEEEccCCccCCCCCCCCC
Q 035985           86 SSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-NIDLITVIPSLMSGPSLTPDIP  164 (293)
Q Consensus        86 SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~~~  164 (293)
                      ||...+.+                        ..+.+.|+.+|...+.+++.++.+. +++++.++|+.+-.+.......
T Consensus       123 ss~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~  178 (230)
T PRK07041        123 SGFAAVRP------------------------SASGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAG  178 (230)
T ss_pred             CchhhcCC------------------------CCcchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhc
Confidence            99864321                        1234589999999999999987764 6889999998775542111000


Q ss_pred             ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCC-CcEEEec
Q 035985          165 SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESAS-GRYICCA  223 (293)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~-~~y~~~~  223 (293)
                      .....+........   .          ...+...+|+|++++.++.+.... ..|+++|
T Consensus       179 ~~~~~~~~~~~~~~---~----------~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g  225 (230)
T PRK07041        179 DAREAMFAAAAERL---P----------ARRVGQPEDVANAILFLAANGFTTGSTVLVDG  225 (230)
T ss_pred             cchHHHHHHHHhcC---C----------CCCCcCHHHHHHHHHHHhcCCCcCCcEEEeCC
Confidence            00011111111100   0          112356899999999999876443 4666643

>PRK09186 flagellin modification protein A; Provisional

Probab=99.26  E-value=9.5e-11  Score=95.61  Aligned_cols=171  Identities=19%  Similarity=0.168  Sum_probs=108.5

Q ss_pred             CeEEEecCCCCCcchhhhhcC-------CCEEEEecccCCCCC---------CCccccchhHHHHHHHHHHHHH----hc
Q 035985           16 ELKIFRADLTDEASFDAPISR-------SDIVFHVATPVNFSS---------DDPETDMIKPAIQGVVNVLKAC----TK   75 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~-------~d~Vih~a~~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~----~~   75 (293)
                      .+.++++|++|++++.++++.       +|+|||+|+......         .... ..+..|+.+...+++++    ++
T Consensus        56 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~  134 (256)
T PRK09186         56 KLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFN-ENLSLHLGSSFLFSQQFAKYFKK  134 (256)
T ss_pred             ceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHH-HHHHHhhhhHHHHHHHHHHHHHh
Confidence            467789999999988887753       899999997532110         1112 55677877766555544    44


Q ss_pred             CCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccC
Q 035985           76 TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPS  152 (293)
Q Consensus        76 ~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~  152 (293)
                      .+ .++||++||....++...     ...++.         +......|+.+|...+.+++.++.+   .++++++++|+
T Consensus       135 ~~-~~~iv~~sS~~~~~~~~~-----~~~~~~---------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg  199 (256)
T PRK09186        135 QG-GGNLVNISSIYGVVAPKF-----EIYEGT---------SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPG  199 (256)
T ss_pred             cC-CceEEEEechhhhccccc-----hhcccc---------ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecc
Confidence            55 679999999764443211     112222         2222347999999999999877765   37999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE-EEec
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY-ICCA  223 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y-~~~~  223 (293)
                      .++++..     .   .+........      .       ...+++++|+|++++.++.+..  ..|.+ .+++
T Consensus       200 ~~~~~~~-----~---~~~~~~~~~~------~-------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  252 (256)
T PRK09186        200 GILDNQP-----E---AFLNAYKKCC------N-------GKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDD  252 (256)
T ss_pred             cccCCCC-----H---HHHHHHHhcC------C-------ccCCCCHHHhhhhHhheeccccccccCceEEecC
Confidence            8876431     1   1111111110      0       1346889999999999997543  23444 4443

>PLN02253 xanthoxin dehydrogenase

Probab=99.25  E-value=1.3e-10  Score=96.09  Aligned_cols=175  Identities=19%  Similarity=0.175  Sum_probs=112.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC--------CCCccccchhHHHHHHHHHHHHHhcC---
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS--------SDDPETDMIKPAIQGVVNVLKACTKT---   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---   76 (293)
                      .++.++++|++|++++.++++       ++|+|||+||.....        ..+.. .+++.|+.++.++++++...   
T Consensus        66 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~  144 (280)
T PLN02253         66 PNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFE-KVFDVNVKGVFLGMKHAARIMIP  144 (280)
T ss_pred             CceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHH-HHHhHhhHHHHHHHHHHHHHHHh
Confidence            368899999999998888775       689999999875321        11123 67899999999988877532   


Q ss_pred             -CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccC
Q 035985           77 -KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPS  152 (293)
Q Consensus        77 -~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~  152 (293)
                       + ..++|++||....++.+                        ....|+.+|...|.+++.++.+.   ++++.+++|+
T Consensus       145 ~~-~g~ii~isS~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg  199 (280)
T PLN02253        145 LK-KGSIVSLCSVASAIGGL------------------------GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPY  199 (280)
T ss_pred             cC-CceEEEecChhhcccCC------------------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence             2 35799998876443221                        12379999999999999988764   7999999999


Q ss_pred             CccCCCCCCCCCc--cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          153 LMSGPSLTPDIPS--SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       153 ~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .+..+......+.  ...........   ......     ......++++|++++++.++....  ..| .+.++|
T Consensus       200 ~v~t~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
T PLN02253        200 AVPTALALAHLPEDERTEDALAGFRA---FAGKNA-----NLKGVELTVDDVANAVLFLASDEARYISGLNLMIDG  267 (280)
T ss_pred             cccccccccccccccchhhhhhhhHH---HhhcCC-----CCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECC
Confidence            9877632211100  00001000000   000000     001224789999999999887543  223 455543

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.25  E-value=2.3e-10  Score=93.79  Aligned_cols=157  Identities=20%  Similarity=0.226  Sum_probs=107.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-CCc-----cccchhHHHHHHHHHHHHHhc---CCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-DDP-----ETDMIKPAIQGVVNVLKACTK---TKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-~~~-----~~~~~~~n~~~~~~l~~~~~~---~~~   78 (293)
                      .++.++.+|++|.+.+.++++       ++|+|||+|+...... .+.     ....++.|+.++.++++.+..   .+ 
T Consensus        50 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-  128 (263)
T PRK06181         50 GEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-  128 (263)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-
Confidence            468889999999998887765       6899999998754221 111     125588999999999988853   23 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..++|++||...+.+.                        .+...|+.+|...+.+++.++.+   .++++++++|+.+.
T Consensus       129 ~~~iv~~sS~~~~~~~------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~  184 (263)
T PRK06181        129 RGQIVVVSSLAGLTGV------------------------PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVA  184 (263)
T ss_pred             CCEEEEEecccccCCC------------------------CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccc
Confidence            4689999997643321                        23358999999999998887653   48999999999887


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK  212 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~  212 (293)
                      .+.....           ............     .....+++++|+|++++.+++.
T Consensus       185 t~~~~~~-----------~~~~~~~~~~~~-----~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        185 TDIRKRA-----------LDGDGKPLGKSP-----MQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             cCcchhh-----------cccccccccccc-----ccccCCCCHHHHHHHHHHHhhC
Confidence            6532210           000001111111     1124789999999999999985

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.22  E-value=2.4e-10  Score=92.78  Aligned_cols=159  Identities=23%  Similarity=0.192  Sum_probs=106.6

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC--CCcc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT--KTVK   80 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~   80 (293)
                      ++.++++|++|.+++.++++       ++|+|||+|+......      .++. ..++.|+.++.++++++...  . ..
T Consensus        53 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~-~~  130 (249)
T PRK06500         53 SALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFD-RSFNTNVKGPYFLIQALLPLLAN-PA  130 (249)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhc-CC
Confidence            57889999999887665543       6899999998754211      1223 67889999999999999742  2 25


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~  157 (293)
                      ++|++||....++.+                        ....|+.+|...|.+++.++.+.   +++++++||+.++++
T Consensus       131 ~~i~~~S~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~  186 (249)
T PRK06500        131 SIVLNGSINAHIGMP------------------------NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTP  186 (249)
T ss_pred             EEEEEechHhccCCC------------------------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCH
Confidence            788878765444321                        23589999999999998887653   899999999999987


Q ss_pred             CCCCC--CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          158 SLTPD--IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       158 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .....  .......+.+.+.... .+            .-+...+|+++++..++...
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~-~~------------~~~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        187 LYGKLGLPEATLDAVAAQIQALV-PL------------GRFGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             HHHhhccCccchHHHHHHHHhcC-CC------------CCCcCHHHHHHHHHHHcCcc
Confidence            42210  0111122222221111 01            12457899999999988754

>PRK08324 short chain dehydrogenase; Validated

Probab=99.22  E-value=1.1e-10  Score=107.86  Aligned_cols=175  Identities=21%  Similarity=0.131  Sum_probs=114.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      ++.++.+|++|++++.++++       ++|+|||+||......      .... ..++.|+.++..+++++.    +.+.
T Consensus       471 ~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~l~~~~~  549 (681)
T PRK08324        471 RALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWR-RSFDVNATGHFLVAREAVRIMKAQGL  549 (681)
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            68899999999998877764       6899999999654211      1122 568899999999977664    3331


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      -.+||++||..++.+.                        .....|+.+|...+.+++.++.+.   |+++++++|+.+|
T Consensus       550 ~g~iV~vsS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~  605 (681)
T PRK08324        550 GGSIVFIASKNAVNPG------------------------PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVV  605 (681)
T ss_pred             CcEEEEECCccccCCC------------------------CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceee
Confidence            1689999997644321                        123589999999999999987664   6999999999998


Q ss_pred             -CCCCCCCCCccHHHHHHHHhCCccc----ccccccccccCCCCcceeHHhHHHHHHHhhc--cCCCCC-cEEEec
Q 035985          156 -GPSLTPDIPSSVALAATLITGNDFL----LNGLKGMQMLSGSISISHVEDVCRAHIFLAE--KESASG-RYICCA  223 (293)
Q Consensus       156 -G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~--~~~~~~-~y~~~~  223 (293)
                       +++.....   +........+....    ... .+    .....+++++|+|++++.++.  .....| +++++|
T Consensus       606 ~~t~~~~~~---~~~~~~~~~g~~~~~~~~~~~-~~----~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdg  673 (681)
T PRK08324        606 RGSGIWTGE---WIEARAAAYGLSEEELEEFYR-AR----NLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDG  673 (681)
T ss_pred             cCCccccch---hhhhhhhhccCChHHHHHHHH-hc----CCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence             55432111   10000111111100    011 10    124678999999999999884  333334 667643

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.21  E-value=1.6e-10  Score=94.32  Aligned_cols=160  Identities=19%  Similarity=0.196  Sum_probs=108.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHhcC--CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACTKT--KT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~   78 (293)
                      .++.++.+|++|.+++.++++       ++|+|||+|+.....       ..+.. ..++.|+.++..+++++...  +.
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~  132 (258)
T PRK07890         54 RRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWR-AVIELNVLGTLRLTQAFTPALAES  132 (258)
T ss_pred             CceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHH-HHHHhhhHHHHHHHHHHHHHHHhC
Confidence            368899999999988876663       589999999864311       11122 67889999999999988642  11


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..+||++||.....+                        ..+...|+.+|...+.+++.++.+.   +++++++||+.++
T Consensus       133 ~~~ii~~sS~~~~~~------------------------~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~  188 (258)
T PRK07890        133 GGSIVMINSMVLRHS------------------------QPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIW  188 (258)
T ss_pred             CCEEEEEechhhccC------------------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccC
Confidence            258999999753221                        1233589999999999999888653   8999999999999


Q ss_pred             CCCCCCCCCc-------cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc
Q 035985          156 GPSLTPDIPS-------SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK  212 (293)
Q Consensus       156 G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~  212 (293)
                      ++........       ....+.......   .   .       ...+.+++|++++++.+++.
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~-------~~~~~~~~dva~a~~~l~~~  239 (258)
T PRK07890        189 GDPLKGYFRHQAGKYGVTVEQIYAETAAN---S---D-------LKRLPTDDEVASAVLFLASD  239 (258)
T ss_pred             cHHHHHHhhhcccccCCCHHHHHHHHhhc---C---C-------ccccCCHHHHHHHHHHHcCH
Confidence            9853211000       000011110000   0   0       23467899999999998875

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.21  E-value=1.9e-10  Score=93.24  Aligned_cols=159  Identities=16%  Similarity=0.135  Sum_probs=104.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC--CCCc----cccchhHHHHHHHHHHHHHhcC------
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS--SDDP----ETDMIKPAIQGVVNVLKACTKT------   76 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~--~~~~----~~~~~~~n~~~~~~l~~~~~~~------   76 (293)
                      ++.++.+|++|++++.++++       .+|+|||+|+.....  ..+.    ....++.|+.++..+++++...      
T Consensus        52 ~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  131 (247)
T PRK09730         52 KAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHG  131 (247)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence            57889999999998887765       468999999964211  1111    1256888999998777665432      


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                      ++..+||++||..++++.+.                       ....|+.+|...+.+++.++.+   .+++++++||+.
T Consensus       132 ~~~g~~v~~sS~~~~~~~~~-----------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~  188 (247)
T PRK09730        132 GSGGAIVNVSSAASRLGAPG-----------------------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGF  188 (247)
T ss_pred             CCCcEEEEECchhhccCCCC-----------------------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCC
Confidence            11357999999864443211                       1136999999999988877654   389999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ++++......  ............+  +            .-..+.+|++++++.++...
T Consensus       189 ~~~~~~~~~~--~~~~~~~~~~~~~--~------------~~~~~~~dva~~~~~~~~~~  232 (247)
T PRK09730        189 IYTEMHASGG--EPGRVDRVKSNIP--M------------QRGGQPEEVAQAIVWLLSDK  232 (247)
T ss_pred             CcCcccccCC--CHHHHHHHHhcCC--C------------CCCcCHHHHHHHHHhhcChh
Confidence            9998643221  1111111111111  1            01236899999999988754

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.21  E-value=3.9e-10  Score=93.71  Aligned_cols=167  Identities=20%  Similarity=0.203  Sum_probs=113.7

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC--CC-----CccccchhHHHHHHHHHHHHHhcC-CCcc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS--SD-----DPETDMIKPAIQGVVNVLKACTKT-KTVK   80 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~--~~-----~~~~~~~~~n~~~~~~l~~~~~~~-~~~~   80 (293)
                      ++.++.+|++|.+.+.++++       .+|+|||+|+.....  ..     +.. ..++.|+.++.++++++... ....
T Consensus        97 ~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~a~~~~~~~~g  175 (290)
T PRK06701         97 KCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLD-KTFKTNIYSYFHMTKAALPHLKQGS  175 (290)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHH-HHHhhhhHHHHHHHHHHHHHHhhCC
Confidence            57889999999998877764       589999999864311  11     112 57889999999999988753 1135


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~  157 (293)
                      ++|++||...+.+..                        ....|+.+|...+.+++.++.++   |++++.++|+.++.+
T Consensus       176 ~iV~isS~~~~~~~~------------------------~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~  231 (290)
T PRK06701        176 AIINTGSITGYEGNE------------------------TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTP  231 (290)
T ss_pred             eEEEEecccccCCCC------------------------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCc
Confidence            899999986433211                        12379999999999999988764   899999999999887


Q ss_pred             CCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          158 SLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ......   .......... .            .....+.+++|++++++.++....  ..| .+++++
T Consensus       232 ~~~~~~---~~~~~~~~~~-~------------~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idg  284 (290)
T PRK06701        232 LIPSDF---DEEKVSQFGS-N------------TPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNG  284 (290)
T ss_pred             cccccc---CHHHHHHHHh-c------------CCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence            432211   0111111110 0            012447889999999999988653  234 445544

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.21  E-value=4.3e-10  Score=91.87  Aligned_cols=170  Identities=16%  Similarity=0.104  Sum_probs=112.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcCC---C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKTK---T   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~   78 (293)
                      .++.++.+|++|.+++.++++       .+|+|||+||.....      ..... .+++.|+.++..+++++....   .
T Consensus        59 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  137 (258)
T PRK09134         59 RRAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWD-RHMATNLRAPFVLAQAFARALPADA  137 (258)
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            468889999999998887764       479999999865321      11122 678899999999998876532   1


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccC
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSG  156 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G  156 (293)
                      -.++|++||.....                        +......|+.+|...|.+.+.++++.  ++++++++|+.+..
T Consensus       138 ~~~iv~~~s~~~~~------------------------~~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t  193 (258)
T PRK09134        138 RGLVVNMIDQRVWN------------------------LNPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLP  193 (258)
T ss_pred             CceEEEECchhhcC------------------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccC
Confidence            35788887753211                        00112479999999999999988764  48999999998865


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEE-eccCCCH
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYIC-CAVNTSV  228 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~-~~~~~t~  228 (293)
                      ....     ....+........              .....+++|+|++++.+++.+...| .|.+ +|..+++
T Consensus       194 ~~~~-----~~~~~~~~~~~~~--------------~~~~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~  248 (258)
T PRK09134        194 SGRQ-----SPEDFARQHAATP--------------LGRGSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAW  248 (258)
T ss_pred             Cccc-----ChHHHHHHHhcCC--------------CCCCcCHHHHHHHHHHHhcCCCcCCCEEEECCCeeccc
Confidence            4311     1111212111111              1123669999999999998766555 4555 4444444

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.21  E-value=2.4e-10  Score=92.25  Aligned_cols=154  Identities=22%  Similarity=0.195  Sum_probs=108.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC---CC--ccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS---DD--PETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~---~~--~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++.++.+|+++++++.++++       ++|+|||+|+......   ..  ..+..++.|+.++.++++++.    +.+ 
T Consensus        56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-  134 (239)
T PRK07666         56 VKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-  134 (239)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-
Confidence            368899999999998887775       6899999998753211   01  112568899999988888775    334 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      .+++|++||...+++.                        .+...|+.+|...+.+++.++.+   .+++++++||+.+.
T Consensus       135 ~~~iv~~ss~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~  190 (239)
T PRK07666        135 SGDIINISSTAGQKGA------------------------AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVA  190 (239)
T ss_pred             CcEEEEEcchhhccCC------------------------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccc
Confidence            5789999997644322                        12347999999999888877654   48999999999987


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcE
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRY  219 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y  219 (293)
                      ++.....             .    .....       ...++..+|+++.++.++..+  .++|
T Consensus       191 t~~~~~~-------------~----~~~~~-------~~~~~~~~~~a~~~~~~l~~~--~~~~  228 (239)
T PRK07666        191 TDMAVDL-------------G----LTDGN-------PDKVMQPEDLAEFIVAQLKLN--KRTF  228 (239)
T ss_pred             Ccchhhc-------------c----ccccC-------CCCCCCHHHHHHHHHHHHhCC--CceE
Confidence            7642110             0    00000       233577999999999999875  3455

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.21  E-value=4.4e-10  Score=92.79  Aligned_cols=117  Identities=21%  Similarity=0.222  Sum_probs=86.1

Q ss_pred             CeEEEecCCCCCcchhhhhc--------CCCEEEEecccCCCCC--CCc---cccchhHHHHH----HHHHHHHHhcCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS--------RSDIVFHVATPVNFSS--DDP---ETDMIKPAIQG----VVNVLKACTKTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~--------~~d~Vih~a~~~~~~~--~~~---~~~~~~~n~~~----~~~l~~~~~~~~~   78 (293)
                      +++++.+|++|.+++.++++        .+|+|||+||......  ..+   .+..++.|+.+    +..++..+++.+ 
T Consensus        48 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-  126 (277)
T PRK05993         48 GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-  126 (277)
T ss_pred             CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-
Confidence            68899999999988776654        4799999998754221  111   12568889888    556677777776 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..+||++||.....                        +..+...|+.+|...+.+++.++.+   .|+++++++|+.+-
T Consensus       127 ~g~iv~isS~~~~~------------------------~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~  182 (277)
T PRK05993        127 QGRIVQCSSILGLV------------------------PMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIE  182 (277)
T ss_pred             CCEEEEECChhhcC------------------------CCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCcc
Confidence            68999999975321                        1123458999999999999887643   48999999999886


Q ss_pred             CC
Q 035985          156 GP  157 (293)
Q Consensus       156 G~  157 (293)
                      .+
T Consensus       183 T~  184 (277)
T PRK05993        183 TR  184 (277)
T ss_pred             Cc
Confidence            55

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.20  E-value=3.7e-10  Score=91.76  Aligned_cols=158  Identities=21%  Similarity=0.194  Sum_probs=107.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--C---CccccchhHHHHHHHHHHHHHhcC----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--D---DPETDMIKPAIQGVVNVLKACTKT----KT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~---~~~~~~~~~n~~~~~~l~~~~~~~----~~   78 (293)
                      .++.++.+|++|++++.++++       ++|+|||+++......  .   ...+..+..|+.++.++++++...    + 
T Consensus        56 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-  134 (250)
T PRK12939         56 GRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-  134 (250)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-
Confidence            368899999999998887763       6899999999754211  0   111256778999999998887542    2 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..+||++||.....+.                        .....|+.+|...+.+++.++.+   .++++++++|+.+.
T Consensus       135 ~g~iv~isS~~~~~~~------------------------~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~  190 (250)
T PRK12939        135 RGRIVNLASDTALWGA------------------------PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTA  190 (250)
T ss_pred             CeEEEEECchhhccCC------------------------CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCC
Confidence            3599999997533221                        12247999999999999987754   37999999999887


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+........   ..........             ....+++++|++++++.++...
T Consensus       191 t~~~~~~~~~---~~~~~~~~~~-------------~~~~~~~~~dva~~~~~l~~~~  232 (250)
T PRK12939        191 TEATAYVPAD---ERHAYYLKGR-------------ALERLQVPDDVAGAVLFLLSDA  232 (250)
T ss_pred             CccccccCCh---HHHHHHHhcC-------------CCCCCCCHHHHHHHHHHHhCcc
Confidence            6643221110   1111111110             1345788999999999999764

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.19  E-value=5.2e-10  Score=90.70  Aligned_cols=166  Identities=22%  Similarity=0.247  Sum_probs=110.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++.++.+|+++.+++.++++       ++|+|||+|+......      .... ..+..|+.++.++++++...    +
T Consensus        55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  133 (248)
T PRK05557         55 GKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWD-RVIDTNLTGVFNLTKAVARPMMKQR  133 (248)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            468889999999998877664       5899999998754221      1122 56778999999988887643    4


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       .++||++||....++..                        ....|+.+|...+.+++.++++   .++++++++|+.+
T Consensus       134 -~~~~v~iss~~~~~~~~------------------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~  188 (248)
T PRK05557        134 -SGRIINISSVVGLMGNP------------------------GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFI  188 (248)
T ss_pred             -CeEEEEEcccccCcCCC------------------------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcc
Confidence             57899999975444322                        2247999999999888877654   3799999999987


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .++....    .............      .       ...+.+++|+++++..++....  ..| .|++++
T Consensus       189 ~~~~~~~----~~~~~~~~~~~~~------~-------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~  243 (248)
T PRK05557        189 ETDMTDA----LPEDVKEAILAQI------P-------LGRLGQPEEIASAVAFLASDEAAYITGQTLHVNG  243 (248)
T ss_pred             CCccccc----cChHHHHHHHhcC------C-------CCCCcCHHHHHHHHHHHcCcccCCccccEEEecC
Confidence            5543221    1111111111111      0       2346789999999988876522  233 555543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.19  E-value=3.6e-10  Score=87.94  Aligned_cols=160  Identities=23%  Similarity=0.238  Sum_probs=110.6

Q ss_pred             CCeEEEecCCCCCcchhhhh-------cCCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPI-------SRSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      ..+.++..|++|++++.+++       .++|++||.||.....      .+++. .++++|+.|..+..++..    +++
T Consensus        53 ~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~-~Mid~Ni~G~l~~~~avLP~m~~r~  131 (246)
T COG4221          53 GAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWD-RMIDTNVKGLLNGTRAVLPGMVERK  131 (246)
T ss_pred             CceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHH-HHHHHHHHHHHHHHHHhhhHHHhcC
Confidence            36889999999998866554       3699999999986421      12333 899999999988888764    444


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..++|.+||....+..+                        -.+.|+.+|+....+...+..+.   +++++.+-|+.+
T Consensus       132 -~G~IiN~~SiAG~~~y~------------------------~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v  186 (246)
T COG4221         132 -SGHIINLGSIAGRYPYP------------------------GGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLV  186 (246)
T ss_pred             -CceEEEeccccccccCC------------------------CCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCcee
Confidence             45999999987544322                        22489999999999998887764   799999999987


Q ss_pred             cCCCCCC-CCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC
Q 035985          155 SGPSLTP-DIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG  217 (293)
Q Consensus       155 ~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~  217 (293)
                      -...... .....-..+-+.       +.          ....+..+|+|+.+..+++.|..-.
T Consensus       187 ~~~~~s~v~~~g~~~~~~~~-------y~----------~~~~l~p~dIA~~V~~~~~~P~~vn  233 (246)
T COG4221         187 ETTEFSTVRFEGDDERADKV-------YK----------GGTALTPEDIAEAVLFAATQPQHVN  233 (246)
T ss_pred             cceecccccCCchhhhHHHH-------hc----------cCCCCCHHHHHHHHHHHHhCCCccc
Confidence            4432110 000000000000       00          2456789999999999999886533

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.19  E-value=5.1e-10  Score=91.48  Aligned_cols=170  Identities=20%  Similarity=0.206  Sum_probs=111.2

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC--CCCcc---ccchhHHHHHHHHHHHHHhcC-----CC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS--SDDPE---TDMIKPAIQGVVNVLKACTKT-----KT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~--~~~~~---~~~~~~n~~~~~~l~~~~~~~-----~~   78 (293)
                      ++.++++|++|++++.++++       .+|+|||+|+.....  ...+.   ...++.|+.++.++++++...     + 
T Consensus        62 ~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-  140 (259)
T PRK08213         62 DALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-  140 (259)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-
Confidence            57889999999998866553       589999999864211  11111   256779999999999987543     4 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..+||++||...+++...                    ...+...|+.+|...|.+++.+++++   ++++.+++|+.+-
T Consensus       141 ~~~~v~~sS~~~~~~~~~--------------------~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~  200 (259)
T PRK08213        141 YGRIINVASVAGLGGNPP--------------------EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFP  200 (259)
T ss_pred             CeEEEEECChhhccCCCc--------------------cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCC
Confidence            679999999764443221                    11233589999999999999987754   7999999998876


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCc-EEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGR-YICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~-y~~~~  223 (293)
                      .+....    .+..+.+.+.....             ..-+...+|++.++..++....  ..|. +.+++
T Consensus       201 t~~~~~----~~~~~~~~~~~~~~-------------~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~  254 (259)
T PRK08213        201 TKMTRG----TLERLGEDLLAHTP-------------LGRLGDDEDLKGAALLLASDASKHITGQILAVDG  254 (259)
T ss_pred             Ccchhh----hhHHHHHHHHhcCC-------------CCCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence            543221    12222222221111             1223458999999888876542  2343 34544

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.19  E-value=2.6e-10  Score=93.16  Aligned_cols=145  Identities=14%  Similarity=0.152  Sum_probs=103.8

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-------CCccccchhHHHHHHHHHHH----HHhcCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-------DDPETDMIKPAIQGVVNVLK----ACTKTK   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-------~~~~~~~~~~n~~~~~~l~~----~~~~~~   77 (293)
                      ++.++.+|++|++++.++++       .+|++||+||......       .... ..++.|+.++..+++    ++++.+
T Consensus        51 ~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~-~~~~~n~~g~~~l~~~~l~~~~~~~  129 (257)
T PRK07024         51 RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFR-EVMDTNYFGMVATFQPFIAPMRAAR  129 (257)
T ss_pred             eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHH-HHHhHhcHHHHHHHHHHHHHHHhcC
Confidence            68899999999998877764       3799999998753211       1122 678899999988776    445555


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH---hCCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ---ENNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~---~~~~~~~ilR~~~v  154 (293)
                       ..+||++||...+++.+                        ....|+.+|...+.+++.++.   ..|++++++||+.+
T Consensus       130 -~~~iv~isS~~~~~~~~------------------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v  184 (257)
T PRK07024        130 -RGTLVGIASVAGVRGLP------------------------GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYI  184 (257)
T ss_pred             -CCEEEEEechhhcCCCC------------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCC
Confidence             57999999976443221                        124799999999999988764   34899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .++.....               .  .   .       ...++..+++++.++.++.+.
T Consensus       185 ~t~~~~~~---------------~--~---~-------~~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        185 RTPMTAHN---------------P--Y---P-------MPFLMDADRFAARAARAIARG  216 (257)
T ss_pred             cCchhhcC---------------C--C---C-------CCCccCHHHHHHHHHHHHhCC
Confidence            87632110               0  0   0       111356899999999999764

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.19  E-value=1.9e-10  Score=93.39  Aligned_cols=157  Identities=18%  Similarity=0.198  Sum_probs=104.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-------CCCCccccchhHHHHHHHHHHHHH----hcC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-------SSDDPETDMIKPAIQGVVNVLKAC----TKT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~----~~~   76 (293)
                      .++.++.+|++|.+++.++++       ++|+|||+||....       +..+. ..+++.|+.++..+++.+    ++.
T Consensus        46 ~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~  124 (248)
T PRK10538         46 DNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDW-ETMIDTNNKGLVYMTRAVLPGMVER  124 (248)
T ss_pred             cceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            368899999999988877654       69999999986421       11112 267888999866655554    455


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..++|++||.....                        +..+...|+.+|...+.+.+.++.+.   ++.+.+++|+.
T Consensus       125 ~-~~~iv~isS~~~~~------------------------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~  179 (248)
T PRK10538        125 N-HGHIINIGSTAGSW------------------------PYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGL  179 (248)
T ss_pred             C-CcEEEEECCcccCC------------------------CCCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCe
Confidence            5 67999999975321                        11233589999999999999887653   79999999999


Q ss_pred             ccCCCCCCC-CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          154 MSGPSLTPD-IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       154 v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      +.|+..... ........ ..      ..   .       ...++..+|+|++++.++..+.
T Consensus       180 i~~~~~~~~~~~~~~~~~-~~------~~---~-------~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        180 VGGTEFSNVRFKGDDGKA-EK------TY---Q-------NTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             ecccccchhhccCcHHHH-Hh------hc---c-------ccCCCCHHHHHHHHHHHhcCCC
Confidence            986643210 00000000 00      00   0       1234679999999999987653

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.19  E-value=4.6e-10  Score=90.51  Aligned_cols=165  Identities=23%  Similarity=0.200  Sum_probs=111.3

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~~   78 (293)
                      +++++.+|++|++++.+++.       .+|+|||+++......      ..+. ..++.|+.++..+++++..    .+ 
T Consensus        49 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~-  126 (239)
T TIGR01830        49 KALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWD-AVIDTNLTGVFNLTQAVLRIMIKQR-  126 (239)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            57899999999998877764       4799999999754211      1223 6788999999999998864    33 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      .++||++||...+++.+                        +...|+.+|...+.+++.++++   .++.++++||+.+.
T Consensus       127 ~~~~v~~sS~~~~~g~~------------------------~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~  182 (239)
T TIGR01830       127 SGRIINISSVVGLMGNA------------------------GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFID  182 (239)
T ss_pred             CeEEEEECCccccCCCC------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCC
Confidence            56999999976555322                        2247999999999888887664   48999999999876


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ++..... .   ......+.+...             ..-+.+++|++++++.++....  ..+ .|++++
T Consensus       183 ~~~~~~~-~---~~~~~~~~~~~~-------------~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~  236 (239)
T TIGR01830       183 TDMTDKL-S---EKVKKKILSQIP-------------LGRFGTPEEVANAVAFLASDEASYITGQVIHVDG  236 (239)
T ss_pred             Chhhhhc-C---hHHHHHHHhcCC-------------cCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCC
Confidence            5432111 1   111111111110             1225679999999998885532  233 556644

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.19  E-value=2.7e-10  Score=96.17  Aligned_cols=144  Identities=13%  Similarity=0.079  Sum_probs=93.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHhc----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACTK----T   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~   76 (293)
                      .++.++++|++|.+++.++++       .+|+|||+||.....       ..+.. ..+.+|+.++..+++++..    .
T Consensus        55 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~  133 (322)
T PRK07453         55 DSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYE-LSMATNHLGHFLLCNLLLEDLKKS  133 (322)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHH-HHHhHHHHHHHHHHHHHHHHHHhC
Confidence            368899999999998887764       389999999964311       11223 6788999999988887753    2


Q ss_pred             CC-ccEEEEecccchhcccccCCCC--ccccCCCCCch--------hh-hccCCCCCchhHHHHHHHHHHHHHHHHhC--
Q 035985           77 KT-VKRVILTSSAAAVSINAQNVTG--LVMDEKNWTDV--------EF-LSSEKPPTWGYAASKTLAERAACKFAQEN--  142 (293)
Q Consensus        77 ~~-~~~~v~~SS~~~~~~~~~~~~~--~~~~E~~~~~~--------~~-~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--  142 (293)
                      +. ..|+|++||...+++.......  .+.+.+.....        .. ...+..|...|+.||+..+.+++.+++++  
T Consensus       134 ~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~  213 (322)
T PRK07453        134 PAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHE  213 (322)
T ss_pred             CCCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcc
Confidence            21 3599999998644321110000  00000000000        00 00133566789999999988888887764  


Q ss_pred             --CceEEEEccCCccCCCC
Q 035985          143 --NIDLITVIPSLMSGPSL  159 (293)
Q Consensus       143 --~~~~~ilR~~~v~G~~~  159 (293)
                        |++++++||++|++...
T Consensus       214 ~~gi~v~~v~PG~v~~t~~  232 (322)
T PRK07453        214 STGITFSSLYPGCVADTPL  232 (322)
T ss_pred             cCCeEEEEecCCcccCCcc
Confidence              79999999999987543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.17  E-value=8.2e-10  Score=89.08  Aligned_cols=118  Identities=19%  Similarity=0.116  Sum_probs=89.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc---CCCEEEEecccC-CCC------CCCccccchhHHHHHHHHHHHHHh----cCCCcc
Q 035985           15 GELKIFRADLTDEASFDAPIS---RSDIVFHVATPV-NFS------SDDPETDMIKPAIQGVVNVLKACT----KTKTVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~-~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~   80 (293)
                      .+++++.+|++|++.+.++++   .+|+|||+|+.. ...      ..+.. ..++.|+.++.++++++.    +.+ ..
T Consensus        49 ~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~-~~  126 (238)
T PRK08264         49 PRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALR-AEMETNYFGPLAMARAFAPVLAANG-GG  126 (238)
T ss_pred             CceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-CC
Confidence            468899999999999888776   489999999972 211      11122 567889999999988865    344 67


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~  157 (293)
                      +||++||...+.+                        ..+...|+.+|...|.+++.++.+.   +++++++||+.+.++
T Consensus       127 ~~v~~sS~~~~~~------------------------~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~  182 (238)
T PRK08264        127 AIVNVLSVLSWVN------------------------FPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTD  182 (238)
T ss_pred             EEEEEcChhhccC------------------------CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence            8999999763321                        1233589999999999998887653   899999999988765


Q ss_pred             C
Q 035985          158 S  158 (293)
Q Consensus       158 ~  158 (293)
                      .
T Consensus       183 ~  183 (238)
T PRK08264        183 M  183 (238)
T ss_pred             c
Confidence            3

>PRK05717 oxidoreductase; Validated

Probab=99.17  E-value=6.6e-10  Score=90.62  Aligned_cols=158  Identities=18%  Similarity=0.148  Sum_probs=107.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC--------CCCccccchhHHHHHHHHHHHHHhcC--C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS--------SDDPETDMIKPAIQGVVNVLKACTKT--K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~--~   77 (293)
                      .++.++++|+++.+++.++++       .+|+|||+||.....        ..++. ..++.|+.++.++++++...  +
T Consensus        56 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~  134 (255)
T PRK05717         56 ENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWN-RVLAVNLTGPMLLAKHCAPYLRA  134 (255)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHH
Confidence            368899999999987765543       479999999975321        11122 67889999999999998631  1


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCcc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMS  155 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~  155 (293)
                      ...++|++||....++.+                        ..+.|+.+|...+.+++.++.++  ++++.+++|+.+.
T Consensus       135 ~~g~ii~~sS~~~~~~~~------------------------~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~  190 (255)
T PRK05717        135 HNGAIVNLASTRARQSEP------------------------DTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWID  190 (255)
T ss_pred             cCcEEEEEcchhhcCCCC------------------------CCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCc
Confidence            136899999976433211                        12479999999999999998875  5899999999998


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ++......  . ..+........   .          ...+.+++|++.++..++...
T Consensus       191 t~~~~~~~--~-~~~~~~~~~~~---~----------~~~~~~~~~va~~~~~l~~~~  232 (255)
T PRK05717        191 ARDPSQRR--A-EPLSEADHAQH---P----------AGRVGTVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             CCcccccc--c-hHHHHHHhhcC---C----------CCCCcCHHHHHHHHHHHcCch
Confidence            87532210  0 00111100100   0          123568999999998888653

>PRK07985 oxidoreductase; Provisional

Probab=99.16  E-value=1.1e-09  Score=91.22  Aligned_cols=160  Identities=16%  Similarity=0.106  Sum_probs=108.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-------CCCCccccchhHHHHHHHHHHHHHhcC-CCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-------SSDDPETDMIKPAIQGVVNVLKACTKT-KTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~   79 (293)
                      .++.++.+|++|.+++.++++       ++|++||+|+....       +..+.. ..++.|+.++..+++++... ..-
T Consensus       100 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~m~~~  178 (294)
T PRK07985        100 RKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQ-KTFAINVFALFWLTQEAIPLLPKG  178 (294)
T ss_pred             CeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHhhhcC
Confidence            357789999999987776653       57999999986321       111223 67899999999999988753 112


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      .+||++||...+.+.+                        ....|+.+|...+.+++.++.+   .|+++.+++|+++.+
T Consensus       179 g~iv~iSS~~~~~~~~------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t  234 (294)
T PRK07985        179 ASIITTSSIQAYQPSP------------------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWT  234 (294)
T ss_pred             CEEEEECCchhccCCC------------------------CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcc
Confidence            5899999986432111                        1247999999999999988776   489999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      +......  ........... ...            ...+...+|+|.+++.++....
T Consensus       235 ~~~~~~~--~~~~~~~~~~~-~~~------------~~r~~~pedva~~~~fL~s~~~  277 (294)
T PRK07985        235 ALQISGG--QTQDKIPQFGQ-QTP------------MKRAGQPAELAPVYVYLASQES  277 (294)
T ss_pred             ccccccC--CCHHHHHHHhc-cCC------------CCCCCCHHHHHHHHHhhhChhc
Confidence            8532110  00111111111 111            1224568999999999987543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.15  E-value=7.5e-10  Score=90.11  Aligned_cols=168  Identities=17%  Similarity=0.194  Sum_probs=110.5

Q ss_pred             CCeEEEecCCCCCcchhhhhcC--------CCEEEEecccCCC-------CCC----CccccchhHHHHHHHHHHHHHh-
Q 035985           15 GELKIFRADLTDEASFDAPISR--------SDIVFHVATPVNF-------SSD----DPETDMIKPAIQGVVNVLKACT-   74 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~--------~d~Vih~a~~~~~-------~~~----~~~~~~~~~n~~~~~~l~~~~~-   74 (293)
                      .++.++++|++|++++.+++++        +|++||+|+....       ...    +...+.++.|+.++.++++++. 
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  131 (253)
T PRK08642         52 DRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALP  131 (253)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence            3688899999999988877642        8999999975310       000    0112568899999999998885 


Q ss_pred             ---cCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEE
Q 035985           75 ---KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLIT  148 (293)
Q Consensus        75 ---~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~i  148 (293)
                         +.+ ..++|++||.. .. .                      +..+.+.|+.+|...|.+++.+++++   ++++..
T Consensus       132 ~~~~~~-~g~iv~iss~~-~~-~----------------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~  186 (253)
T PRK08642        132 GMREQG-FGRIINIGTNL-FQ-N----------------------PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNM  186 (253)
T ss_pred             HHHhcC-CeEEEEECCcc-cc-C----------------------CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence               334 57899999863 11 0                      22344689999999999999998763   799999


Q ss_pred             EccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          149 VIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       149 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ++|+.+-.+......   .......+... .  +          ...+.+.+|++++++.++....  ..| .+.++|
T Consensus       187 i~pG~v~t~~~~~~~---~~~~~~~~~~~-~--~----------~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdg  248 (253)
T PRK08642        187 VSGGLLRTTDASAAT---PDEVFDLIAAT-T--P----------LRKVTTPQEFADAVLFFASPWARAVTGQNLVVDG  248 (253)
T ss_pred             EeecccCCchhhccC---CHHHHHHHHhc-C--C----------cCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence            999988654221111   11111111111 1  1          1347889999999999987542  233 445543

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.15  E-value=2e-09  Score=87.41  Aligned_cols=169  Identities=18%  Similarity=0.173  Sum_probs=112.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++..+++|+++++++.++++       ++|+|||+||......      .... +.++.|+.+...+++++..    .+
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~  130 (248)
T TIGR01832        52 RRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWD-DVMNVNLKSVFFLTQAAAKHFLKQG  130 (248)
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHhhhhHHHHHHHHHHHHHHHhcC
Confidence            368899999999998876653       5899999998754211      1122 5688999999999888753    22


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      ...++|++||...+.+.                        .....|+.+|...+.+++.++.+.   |+++++++|+.+
T Consensus       131 ~~g~iv~~sS~~~~~~~------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v  186 (248)
T TIGR01832       131 RGGKIINIASMLSFQGG------------------------IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYM  186 (248)
T ss_pred             CCeEEEEEecHHhccCC------------------------CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcC
Confidence            13689999997633211                        122479999999999999998774   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CCcE-EEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SGRY-ICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~~y-~~~~  223 (293)
                      ..+........  ..........   +   .       ...++..+|+|++++.++.....  .|.+ .+.|
T Consensus       187 ~t~~~~~~~~~--~~~~~~~~~~---~---~-------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dg  243 (248)
T TIGR01832       187 ATNNTQALRAD--EDRNAAILER---I---P-------AGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDG  243 (248)
T ss_pred             cCcchhccccC--hHHHHHHHhc---C---C-------CCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCC
Confidence            77643211000  0000111110   1   1       24578899999999999875432  3554 4443

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.14  E-value=1e-09  Score=90.36  Aligned_cols=159  Identities=18%  Similarity=0.085  Sum_probs=105.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCcc---ccchhHHHHHHHHHHHH----HhcCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDPE---TDMIKPAIQGVVNVLKA----CTKTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~~---~~~~~~n~~~~~~l~~~----~~~~~~   78 (293)
                      .++.++++|++|++++.++++       ++|+|||+||......  ....   +..++.|+.++..+++.    +++.+ 
T Consensus        49 ~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-  127 (270)
T PRK05650         49 GDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-  127 (270)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-
Confidence            468889999999988877664       6899999999754211  1111   14567888777776655    45555 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..++|++||...+.+                        ......|+.+|...+.+.+.++.+.   ++++++++|+.+.
T Consensus       128 ~~~iv~vsS~~~~~~------------------------~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~  183 (270)
T PRK05650        128 SGRIVNIASMAGLMQ------------------------GPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQ  183 (270)
T ss_pred             CCEEEEECChhhcCC------------------------CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccc
Confidence            679999999753321                        1123589999999988888887763   8999999999998


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+........ .......... .             ....+++++|+|+.++.++.+.
T Consensus       184 t~~~~~~~~~-~~~~~~~~~~-~-------------~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        184 TNLLDSFRGP-NPAMKAQVGK-L-------------LEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             cCcccccccC-chhHHHHHHH-H-------------hhcCCCCHHHHHHHHHHHHhCC
Confidence            7643221100 0111111000 0             0133578999999999999864

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.14  E-value=1.4e-09  Score=87.40  Aligned_cols=155  Identities=17%  Similarity=0.184  Sum_probs=102.5

Q ss_pred             EEEecCCCCCcchhhhhc------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCCCccE
Q 035985           18 KIFRADLTDEASFDAPIS------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTKTVKR   81 (293)
Q Consensus        18 ~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~   81 (293)
                      .++.+|++|.+++.++++      ++|+|||+|+......      .+.. ..++.|+.++.++++++    ++.+ ..+
T Consensus        44 ~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~-~~~  121 (234)
T PRK07577         44 ELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQ-DVYDLNVRAAVQVTQAFLEGMKLRE-QGR  121 (234)
T ss_pred             eEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CcE
Confidence            678899999988877665      5899999999754221      1222 56788888887776655    3455 679


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~  158 (293)
                      +|++||.. .++.+                        ....|+.+|...+.+++.++.+   .+++++++||+.+..+.
T Consensus       122 iv~~sS~~-~~~~~------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~  176 (234)
T PRK07577        122 IVNICSRA-IFGAL------------------------DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETEL  176 (234)
T ss_pred             EEEEcccc-ccCCC------------------------CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence            99999975 33221                        1247999999999998887654   38999999999988764


Q ss_pred             CCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          159 LTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .....+.. ......+....   .          .-.+...+|++++++.++..+
T Consensus       177 ~~~~~~~~-~~~~~~~~~~~---~----------~~~~~~~~~~a~~~~~l~~~~  217 (234)
T PRK07577        177 FRQTRPVG-SEEEKRVLASI---P----------MRRLGTPEEVAAAIAFLLSDD  217 (234)
T ss_pred             cccccccc-hhHHHHHhhcC---C----------CCCCcCHHHHHHHHHHHhCcc
Confidence            22111100 00111111100   0          112346899999999998765

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.13  E-value=1.3e-09  Score=88.32  Aligned_cols=165  Identities=18%  Similarity=0.168  Sum_probs=108.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHH----HhcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKA----CTKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~----~~~~~   77 (293)
                      .++.++.+|++|.+++.++++       .+|+|||+++.....      .++.. .+++.|+.++.+++++    +++.+
T Consensus        52 ~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  130 (245)
T PRK12824         52 DQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWN-DVINTNLNSVFNVTQPLFAAMCEQG  130 (245)
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHhC
Confidence            358899999999998877664       489999999875321      11222 6778999998887554    45555


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||.....+.                        .....|+.+|...+.+++.++.+   .++++++++|+.+
T Consensus       131 -~~~iv~iss~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~  185 (245)
T PRK12824        131 -YGRIINISSVNGLKGQ------------------------FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYI  185 (245)
T ss_pred             -CeEEEEECChhhccCC------------------------CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEccc
Confidence             6799999997633211                        12247999999999888887653   3899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEe
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICC  222 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~  222 (293)
                      .++......    ......+.....             ...+...+|+++++..++....   .+..+.++
T Consensus       186 ~t~~~~~~~----~~~~~~~~~~~~-------------~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~  239 (245)
T PRK12824        186 ATPMVEQMG----PEVLQSIVNQIP-------------MKRLGTPEEIAAAVAFLVSEAAGFITGETISIN  239 (245)
T ss_pred             CCcchhhcC----HHHHHHHHhcCC-------------CCCCCCHHHHHHHHHHHcCccccCccCcEEEEC
Confidence            876432211    111111111110             1334568999999988886532   23355553

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.13  E-value=1.3e-09  Score=88.90  Aligned_cols=167  Identities=19%  Similarity=0.202  Sum_probs=112.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++..+.+|+++++++.++++       ++|+|||+||......      .+.. ..+..|+.++.++++++..    .+
T Consensus        61 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  139 (255)
T PRK06841         61 GNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWD-KTIDINLKGSFLMAQAVGRHMIAAG  139 (255)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhcHHHHHHHHHHHHHHHhcC
Confidence            356789999999998877664       5799999999754211      1112 5788999999999988764    34


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||....++.+                        ....|+.+|...+.+++.++.+.   +++++.++|+.+
T Consensus       140 -~~~iv~~sS~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v  194 (255)
T PRK06841        140 -GGKIVNLASQAGVVALE------------------------RHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVV  194 (255)
T ss_pred             -CceEEEEcchhhccCCC------------------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcC
Confidence             57999999976443221                        12479999999999999887763   899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CCcE-EEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SGRY-ICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~~y-~~~~  223 (293)
                      ..+........   .....+... .  +          ...+.+.+|++++++.++.....  .|.. .++|
T Consensus       195 ~t~~~~~~~~~---~~~~~~~~~-~--~----------~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dg  250 (255)
T PRK06841        195 LTELGKKAWAG---EKGERAKKL-I--P----------AGRFAYPEEIAAAALFLASDAAAMITGENLVIDG  250 (255)
T ss_pred             cCcccccccch---hHHHHHHhc-C--C----------CCCCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence            76643211100   001111111 0  0          23477899999999999976432  3444 5543

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.12  E-value=8.3e-10  Score=90.31  Aligned_cols=117  Identities=27%  Similarity=0.308  Sum_probs=88.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc--------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS--------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .+++++++|++|.+++.++++        ++|+|||+||......      .+.. ..+..|+.++..+++++.    ..
T Consensus        48 ~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~  126 (260)
T PRK08267         48 GNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHD-RVIDINVKGVLNGAHAALPYLKAT  126 (260)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhC
Confidence            468999999999988877654        4699999999754211      1122 678899999999988874    33


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                      + ..++|++||....++..                        ....|+.+|...+.+.+.++.+   .++++++++|+.
T Consensus       127 ~-~~~iv~isS~~~~~~~~------------------------~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~  181 (260)
T PRK08267        127 P-GARVINTSSASAIYGQP------------------------GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLF  181 (260)
T ss_pred             C-CCEEEEeCchhhCcCCC------------------------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCC
Confidence            4 57899999976554322                        1247999999999999888754   379999999998


Q ss_pred             ccCC
Q 035985          154 MSGP  157 (293)
Q Consensus       154 v~G~  157 (293)
                      +-.+
T Consensus       182 ~~t~  185 (260)
T PRK08267        182 VDTA  185 (260)
T ss_pred             cCCc
Confidence            8654

>PRK08017 oxidoreductase; Provisional

Probab=99.12  E-value=1.6e-09  Score=88.44  Aligned_cols=160  Identities=18%  Similarity=0.122  Sum_probs=103.7

Q ss_pred             CeEEEecCCCCCcchhhhhc--------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHH----HHHHhcCC
Q 035985           16 ELKIFRADLTDEASFDAPIS--------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNV----LKACTKTK   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~--------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l----~~~~~~~~   77 (293)
                      +++.+++|++|.+++.++++        .+|.+||+||......      .+.. ..++.|+.++.++    ++.+++.+
T Consensus        46 ~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~-~~~~~n~~g~~~~~~~~~~~~~~~~  124 (256)
T PRK08017         46 GFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQME-QQFSTNFFGTHQLTMLLLPAMLPHG  124 (256)
T ss_pred             CCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHhhcC
Confidence            57889999999887665542        4699999998643211      1122 6788899887775    56666666


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH---hCCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ---ENNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~---~~~~~~~ilR~~~v  154 (293)
                       .+++|++||.....+.                        ...+.|+.+|...|.+.+.++.   ..+++++++||+.+
T Consensus       125 -~~~iv~~ss~~~~~~~------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~  179 (256)
T PRK08017        125 -EGRIVMTSSVMGLIST------------------------PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPI  179 (256)
T ss_pred             -CCEEEEEcCcccccCC------------------------CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCc
Confidence             6899999996432211                        1235799999999988776533   34899999999876


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESAS  216 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~  216 (293)
                      ..+....        +... .. ...+.. .+    ...+.+++++|+++++..+++++...
T Consensus       180 ~t~~~~~--------~~~~-~~-~~~~~~-~~----~~~~~~~~~~d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        180 RTRFTDN--------VNQT-QS-DKPVEN-PG----IAARFTLGPEAVVPKLRHALESPKPK  226 (256)
T ss_pred             ccchhhc--------ccch-hh-ccchhh-hH----HHhhcCCCHHHHHHHHHHHHhCCCCC
Confidence            5432110        0000 00 011111 11    11356899999999999999876543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.12  E-value=2.2e-09  Score=87.60  Aligned_cols=170  Identities=16%  Similarity=0.179  Sum_probs=107.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHH----HHHhcCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVL----KACTKTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~----~~~~~~~~   78 (293)
                      ++.++.+|++|++++.++++       ++|+|||+||.....      ..+.. ..++.|+.++..++    ...++.+ 
T Consensus        52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~l~~~~~~~-  129 (255)
T PRK06463         52 GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYN-KMIKINLNGAIYTTYEFLPLLKLSK-  129 (255)
T ss_pred             CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHH-HHHhHhhHHHHHHHHHHHHHHHhcC-
Confidence            57889999999998887764       589999999875311      11122 67888999965554    4444444 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..++|++||...+...                       ......|+.+|...+.+++.++.+   .++++++++|+.+-
T Consensus       130 ~g~iv~isS~~~~~~~-----------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~  186 (255)
T PRK06463        130 NGAIVNIASNAGIGTA-----------------------AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVE  186 (255)
T ss_pred             CcEEEEEcCHHhCCCC-----------------------CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCC
Confidence            5799999997633211                       012247999999999999998865   38999999999875


Q ss_pred             CCCCCCCC-CccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDI-PSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .+...... ......+........ .            ...+...+|++++++.++....  ..| .+.++|
T Consensus       187 t~~~~~~~~~~~~~~~~~~~~~~~-~------------~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg  245 (255)
T PRK06463        187 TDMTLSGKSQEEAEKLRELFRNKT-V------------LKTTGKPEDIANIVLFLASDDARYITGQVIVADG  245 (255)
T ss_pred             CchhhcccCccchHHHHHHHHhCC-C------------cCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence            44221100 000011111111111 0            1235679999999999987543  234 445544

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.12  E-value=1.5e-09  Score=88.00  Aligned_cols=167  Identities=18%  Similarity=0.211  Sum_probs=110.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-----CCccccchhHHHHHHHHHHHHHhc----CCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-----DDPETDMIKPAIQGVVNVLKACTK----TKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~----~~~   78 (293)
                      .++.++.+|++|++++.++++       ++|+|||+++......     .+..+..++.|+.+..++++++..    .+ 
T Consensus        55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-  133 (247)
T PRK05565         55 GDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-  133 (247)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            358899999999998877765       6899999999763210     011126788899998888777653    34 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      .++||++||...+++..                        ....|+.+|...+.+++.++.+   .|++++++||+.+-
T Consensus       134 ~~~~v~~sS~~~~~~~~------------------------~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~  189 (247)
T PRK05565        134 SGVIVNISSIWGLIGAS------------------------CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAID  189 (247)
T ss_pred             CcEEEEECCHhhccCCC------------------------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCcc
Confidence            57899999986554322                        1237999999988888877664   38999999999886


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE-EEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY-ICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y-~~~~  223 (293)
                      .+......    ......+..      ...       ...+...+|+++.++.++....  ..|.+ .+++
T Consensus       190 t~~~~~~~----~~~~~~~~~------~~~-------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~  243 (247)
T PRK05565        190 TEMWSSFS----EEDKEGLAE------EIP-------LGRLGKPEEIAKVVLFLASDDASYITGQIITVDG  243 (247)
T ss_pred             CccccccC----hHHHHHHHh------cCC-------CCCCCCHHHHHHHHHHHcCCccCCccCcEEEecC
Confidence            65432211    111111111      000       2345689999999999887643  34544 4443

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.11  E-value=1.8e-09  Score=87.51  Aligned_cols=158  Identities=23%  Similarity=0.259  Sum_probs=105.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC-CCcc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT-KTVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~   80 (293)
                      .++.++.+|+++++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++.+. ....
T Consensus        55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~  133 (245)
T PRK12937         55 GRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFD-RTIATNLRGAFVVLREAARHLGQGG  133 (245)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHhhhchHHHHHHHHHHHHhccCc
Confidence            468899999999998887765       6899999999753211      1122 56789999999999888654 1135


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~  157 (293)
                      ++|++||.....                        +..+.+.|+.+|...+.+++.++.++   ++++++++|+.+-.+
T Consensus       134 ~iv~~ss~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~  189 (245)
T PRK12937        134 RIINLSTSVIAL------------------------PLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATE  189 (245)
T ss_pred             EEEEEeeccccC------------------------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCc
Confidence            899999865221                        11233579999999999999887653   789999999987655


Q ss_pred             CCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          158 SLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .....  .. ......+.....             ..-+.+++|+++++..++..+
T Consensus       190 ~~~~~--~~-~~~~~~~~~~~~-------------~~~~~~~~d~a~~~~~l~~~~  229 (245)
T PRK12937        190 LFFNG--KS-AEQIDQLAGLAP-------------LERLGTPEEIAAAVAFLAGPD  229 (245)
T ss_pred             hhccc--CC-HHHHHHHHhcCC-------------CCCCCCHHHHHHHHHHHcCcc
Confidence            31110  01 111111111110             122456899999999888654

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.09  E-value=1.2e-09  Score=89.98  Aligned_cols=148  Identities=22%  Similarity=0.187  Sum_probs=102.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--C---CccccchhHHHHHHHHHHHHHh----cCCCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--D---DPETDMIKPAIQGVVNVLKACT----KTKTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~---~~~~~~~~~n~~~~~~l~~~~~----~~~~~   79 (293)
                      ++.++.+|++|++++.++++       ++|++||+||......  .   +....+++.|+.++..+++++.    +.+ .
T Consensus        51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~  129 (273)
T PRK07825         51 LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-R  129 (273)
T ss_pred             cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence            57889999999988766553       5799999999754211  0   1112577889988888776653    455 6


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      .+||++||.....+.                        .....|+.+|...+.+.+.++.+   .|+++++++|+.+-.
T Consensus       130 g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t  185 (273)
T PRK07825        130 GHVVNVASLAGKIPV------------------------PGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNT  185 (273)
T ss_pred             CEEEEEcCccccCCC------------------------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcc
Confidence            799999997633211                        12357999999888877776554   489999999998744


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      +...               +.    ..       .....++..+|+|+.++.++.++.
T Consensus       186 ~~~~---------------~~----~~-------~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        186 ELIA---------------GT----GG-------AKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             hhhc---------------cc----cc-------ccCCCCCCHHHHHHHHHHHHhCCC
Confidence            3210               00    00       012457889999999999998754

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.09  E-value=2.5e-09  Score=86.56  Aligned_cols=166  Identities=22%  Similarity=0.242  Sum_probs=108.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .+++++.+|+++.+++.++++       ++|+|||+|+.....      ..+.. ..++.|+.++.++++++.+    .+
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  130 (245)
T PRK12936         52 ERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWD-SVLEVNLTATFRLTRELTHPMMRRR  130 (245)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHH-HHHhhccHHHHHHHHHHHHHHHHhC
Confidence            368889999999998877653       589999999975321      11222 6788999999888887642    34


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||....++.+                        ....|+.+|...+.+++.++.+   .++++++++|+.+
T Consensus       131 -~~~iv~~sS~~~~~~~~------------------------~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~  185 (245)
T PRK12936        131 -YGRIINITSVVGVTGNP------------------------GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFI  185 (245)
T ss_pred             -CCEEEEECCHHhCcCCC------------------------CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcC
Confidence             57999999976454322                        1237999999888888777654   3799999999977


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~-~y~~~~  223 (293)
                      ..+....    ..........+.   .   .       ...+...+|+++++..++.....  .| .+++++
T Consensus       186 ~t~~~~~----~~~~~~~~~~~~---~---~-------~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK12936        186 ESAMTGK----LNDKQKEAIMGA---I---P-------MKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNG  240 (245)
T ss_pred             cCchhcc----cChHHHHHHhcC---C---C-------CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECC
Confidence            5543211    001111111110   0   0       12356799999999888765432  34 456544

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.09  E-value=1.9e-09  Score=87.11  Aligned_cols=151  Identities=18%  Similarity=0.169  Sum_probs=104.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++.+|++|++.+.++++       ++|+|||+||......      .+. +..+..|+.++.++++.+    ++.+
T Consensus        55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~  133 (241)
T PRK07454         55 VKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDW-QWVIQLNLTSVFQCCSAVLPGMRARG  133 (241)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHH-HHHHHhccHHHHHHHHHHHHHHHhcC
Confidence            368899999999998877664       4899999998753211      112 256778888888877665    3444


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..++|++||...+.+                        ..+...|+.+|...+.+.+.++.+   .+++++++||+.+
T Consensus       134 -~~~iv~isS~~~~~~------------------------~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i  188 (241)
T PRK07454        134 -GGLIINVSSIAARNA------------------------FPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAV  188 (241)
T ss_pred             -CcEEEEEccHHhCcC------------------------CCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcc
Confidence             578999999863221                        112357999999999998887643   3899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      -.+.....  .             . .....       ....+..+|+|++++.++..+.
T Consensus       189 ~t~~~~~~--~-------------~-~~~~~-------~~~~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        189 NTPLWDTE--T-------------V-QADFD-------RSAMLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             cCCccccc--c-------------c-ccccc-------cccCCCHHHHHHHHHHHHcCCc
Confidence            66532110  0             0 00000       1224679999999999998764

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.08  E-value=1.5e-09  Score=88.54  Aligned_cols=116  Identities=24%  Similarity=0.257  Sum_probs=84.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-CCCEEEEecccCCCCC--CCc---cccchhHHHHHHHHHHH----HHhcCCCccEEEE
Q 035985           15 GELKIFRADLTDEASFDAPIS-RSDIVFHVATPVNFSS--DDP---ETDMIKPAIQGVVNVLK----ACTKTKTVKRVIL   84 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-~~d~Vih~a~~~~~~~--~~~---~~~~~~~n~~~~~~l~~----~~~~~~~~~~~v~   84 (293)
                      .++.++.+|++|++++.+++. ++|+|||+|+......  ..+   ....+..|+.++..+.+    .+++.+ .++||+
T Consensus        51 ~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~  129 (257)
T PRK09291         51 LALRVEKLDLTDAIDRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVF  129 (257)
T ss_pred             CcceEEEeeCCCHHHHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEE
Confidence            368899999999999988887 8999999998753211  111   11456778887766554    444556 589999


Q ss_pred             ecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           85 TSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        85 ~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      +||.....+.                        .....|+.+|...|.+++.++.+   .|++++++||+.+.
T Consensus       130 ~SS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~  179 (257)
T PRK09291        130 TSSMAGLITG------------------------PFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYL  179 (257)
T ss_pred             EcChhhccCC------------------------CCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence            9997533211                        12347999999999988877654   48999999998764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.08  E-value=3e-09  Score=86.80  Aligned_cols=168  Identities=15%  Similarity=0.163  Sum_probs=112.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++.+|++|++++.++++       .+|+|||+++.....      ..+.. ..+..|+.++..+++++.+    .+
T Consensus        60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~  138 (256)
T PRK06124         60 GAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIR-ALLETDLVAPILLSRLAAQRMKRQG  138 (256)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            358899999999998877664       469999999975321      11122 5688999999888866643    45


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||.....+.+                        ....|+.+|...+.+++.++.+.   ++++..++|+.+
T Consensus       139 -~~~iv~~ss~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v  193 (256)
T PRK06124        139 -YGRIIAITSIAGQVARA------------------------GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYF  193 (256)
T ss_pred             -CcEEEEEeechhccCCC------------------------CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCc
Confidence             67999999975332211                        12489999999999988876653   799999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CCcE-EEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SGRY-ICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~~y-~~~~  223 (293)
                      .++.......  ...+...+... .  .          ...+++++|++++++.++..+..  .|.+ .+.|
T Consensus       194 ~t~~~~~~~~--~~~~~~~~~~~-~--~----------~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dg  250 (256)
T PRK06124        194 ATETNAAMAA--DPAVGPWLAQR-T--P----------LGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDG  250 (256)
T ss_pred             cCcchhhhcc--ChHHHHHHHhc-C--C----------CCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECC
Confidence            8875322110  01111111111 1  0          13368899999999999986532  3554 4443

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.08  E-value=3.4e-09  Score=86.66  Aligned_cols=118  Identities=19%  Similarity=0.187  Sum_probs=85.8

Q ss_pred             CeEEEecCCCCCcchhhhh-------cCCCEEEEecccCCC--------CCCCccccchhHHHHHHHHHHHHH----hcC
Q 035985           16 ELKIFRADLTDEASFDAPI-------SRSDIVFHVATPVNF--------SSDDPETDMIKPAIQGVVNVLKAC----TKT   76 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~----~~~   76 (293)
                      ++.++++|++|++.+.+++       ..+|+|||+||....        ...+.. ..++.|+.++..+++++    ++.
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~  128 (260)
T PRK06523         50 GVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQ-DELNLNLLAAVRLDRALLPGMIAR  128 (260)
T ss_pred             ceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHH-HHHhHhhHHHHHHHHHHHHHHHhc
Confidence            5788999999998776554       358999999985421        111222 67788999987776554    344


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..++|++||.....+                       ...+...|+.+|...+.+++.++.+.   |+++.+++|+.
T Consensus       129 ~-~g~ii~isS~~~~~~-----------------------~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~  184 (260)
T PRK06523        129 G-SGVIIHVTSIQRRLP-----------------------LPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGW  184 (260)
T ss_pred             C-CcEEEEEecccccCC-----------------------CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCc
Confidence            4 578999999753211                       01133589999999999999887653   79999999999


Q ss_pred             ccCCC
Q 035985          154 MSGPS  158 (293)
Q Consensus       154 v~G~~  158 (293)
                      +.++.
T Consensus       185 v~t~~  189 (260)
T PRK06523        185 IETEA  189 (260)
T ss_pred             ccCcc
Confidence            98774

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.08  E-value=3.6e-09  Score=85.14  Aligned_cols=158  Identities=17%  Similarity=0.221  Sum_probs=104.7

Q ss_pred             CCeEEEecCCCCC-cchhhhhcCCCEEEEecccCCC--C-----CCCccccchhHHHHHHHHHHHHHhc----CCCccEE
Q 035985           15 GELKIFRADLTDE-ASFDAPISRSDIVFHVATPVNF--S-----SDDPETDMIKPAIQGVVNVLKACTK----TKTVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~-~~~~~~~~~~d~Vih~a~~~~~--~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~   82 (293)
                      .++.++.+|++++ +.+.+.+..+|+|||+|+....  .     ..+.. ..+..|+.++.++++++..    .+ ..+|
T Consensus        45 ~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~-~~~i  122 (235)
T PRK06550         45 GNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQ-HIFDTNLTSTFLLTRAYLPQMLERK-SGII  122 (235)
T ss_pred             CcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC-CcEE
Confidence            3578899999987 3333444578999999985421  1     11122 6788999999999888753    33 4689


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSL  159 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~  159 (293)
                      |++||.....+..                        ....|+.+|...+.+++.++.++   |+++++++|+.+.++..
T Consensus       123 v~~sS~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~  178 (235)
T PRK06550        123 INMCSIASFVAGG------------------------GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMT  178 (235)
T ss_pred             EEEcChhhccCCC------------------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccc
Confidence            9999976433211                        12479999999999988887654   89999999999987753


Q ss_pred             CCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          160 TPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ......  ..+...+....   +          ...+...+|+|++++.++...
T Consensus       179 ~~~~~~--~~~~~~~~~~~---~----------~~~~~~~~~~a~~~~~l~s~~  217 (235)
T PRK06550        179 AADFEP--GGLADWVARET---P----------IKRWAEPEEVAELTLFLASGK  217 (235)
T ss_pred             ccccCc--hHHHHHHhccC---C----------cCCCCCHHHHHHHHHHHcChh
Confidence            322111  11111111111   0          123567899999999998654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.08  E-value=3.8e-09  Score=86.17  Aligned_cols=166  Identities=17%  Similarity=0.174  Sum_probs=110.2

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-----CCccccchhHHHHHHHHHHHHHh----cCCCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-----DDPETDMIKPAIQGVVNVLKACT----KTKTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~----~~~~~   79 (293)
                      ++.++.+|++|.+++.++++       ++|+|||+|+......     .+.. ..+..|+.++.++++++.    +.+ .
T Consensus        61 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~-~  138 (255)
T PRK06113         61 QAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFR-RAYELNVFSFFHLSQLVAPEMEKNG-G  138 (255)
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHH-HHHHHhhhhHHHHHHHHHHHHHhcC-C
Confidence            57888999999998877653       5799999999753211     1122 558899999999999886    333 4


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      .++|++||.....                        +..+...|+.+|...+.+++.++.+   .+++++++.|+.+-.
T Consensus       139 ~~iv~isS~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t  194 (255)
T PRK06113        139 GVILTITSMAAEN------------------------KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILT  194 (255)
T ss_pred             cEEEEEecccccC------------------------CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccc
Confidence            6899999975321                        1123357999999999999998764   379999999998865


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +.....   ....+........ .            ..-+...+|++++++.++....  ..| .++++|
T Consensus       195 ~~~~~~---~~~~~~~~~~~~~-~------------~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~g  248 (255)
T PRK06113        195 DALKSV---ITPEIEQKMLQHT-P------------IRRLGQPQDIANAALFLCSPAASWVSGQILTVSG  248 (255)
T ss_pred             cccccc---cCHHHHHHHHhcC-C------------CCCCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence            532211   1111111111111 0            1225679999999999987543  234 445644

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.07  E-value=2.8e-09  Score=86.40  Aligned_cols=155  Identities=17%  Similarity=0.132  Sum_probs=103.7

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHH----hcCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKAC----TKTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~   78 (293)
                      ++..+.+|++|.+++.++++       ++|+|||+|+.....      ..+.. .+++.|+.++..+++++    ++.+ 
T Consensus        54 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~-  131 (246)
T PRK12938         54 DFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWT-AVIDTNLTSLFNVTKQVIDGMVERG-  131 (246)
T ss_pred             cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC-
Confidence            57788999999988877664       589999999975321      11222 67889999877765554    4445 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..+||++||.....+                        ......|+.+|...+.+++.++++   .++++++++|+.+.
T Consensus       132 ~~~iv~isS~~~~~~------------------------~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~  187 (246)
T PRK12938        132 WGRIINISSVNGQKG------------------------QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIG  187 (246)
T ss_pred             CeEEEEEechhccCC------------------------CCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccC
Confidence            679999999753221                        112358999999999888877654   38999999999987


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ++.....    .......+.+...             ...+...+|+++++..++...
T Consensus       188 t~~~~~~----~~~~~~~~~~~~~-------------~~~~~~~~~v~~~~~~l~~~~  228 (246)
T PRK12938        188 TDMVKAI----RPDVLEKIVATIP-------------VRRLGSPDEIGSIVAWLASEE  228 (246)
T ss_pred             Cchhhhc----ChHHHHHHHhcCC-------------ccCCcCHHHHHHHHHHHcCcc
Confidence            7643211    1111122211111             123456899999999888654

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.07  E-value=3.3e-09  Score=86.81  Aligned_cols=170  Identities=17%  Similarity=0.183  Sum_probs=108.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-----CCCccccchhHHHHHHHHHHHHHhc---CCCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-----SDDPETDMIKPAIQGVVNVLKACTK---TKTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~   79 (293)
                      .++.++++|++|.+++.++++       .+|++||+|+.....     ..+.. ..++.|+.++..+++++..   .+ -
T Consensus        52 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~-~  129 (261)
T PRK08265         52 ERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWL-AALDVNLVSAAMLAQAAHPHLARG-G  129 (261)
T ss_pred             CeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHH-HHHhHhhHHHHHHHHHHHHHHhcC-C
Confidence            368899999999998877764       579999999864321     11222 6678899999888887653   22 3


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .++|++||.....+.+                        ....|+.+|...+.+++.++.+.   ++++++++|+.+..
T Consensus       130 g~ii~isS~~~~~~~~------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t  185 (261)
T PRK08265        130 GAIVNFTSISAKFAQT------------------------GRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWS  185 (261)
T ss_pred             cEEEEECchhhccCCC------------------------CCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccC
Confidence            6899999976443221                        22479999999999999887653   79999999998765


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +........... .........  .+          ..-+...+|+|++++.++....  ..| .+.++|
T Consensus       186 ~~~~~~~~~~~~-~~~~~~~~~--~p----------~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdg  242 (261)
T PRK08265        186 RVMDELSGGDRA-KADRVAAPF--HL----------LGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDG  242 (261)
T ss_pred             hhhhhhcccchh-HHHHhhccc--CC----------CCCccCHHHHHHHHHHHcCccccCccCcEEEECC
Confidence            532110000000 000000000  00          1124568999999999987543  234 445543

>PRK12743 oxidoreductase; Provisional

Probab=99.07  E-value=2.7e-09  Score=87.11  Aligned_cols=167  Identities=16%  Similarity=0.132  Sum_probs=110.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++.++.+|++|++++.++++       .+|+|||+||.....      ..+.. ..+..|+.++..+++++...    +
T Consensus        52 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~l~~~~  130 (256)
T PRK12743         52 VRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWR-KIFTVDVDGAFLCSQIAARHMVKQG  130 (256)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            368899999999988776654       589999999875421      11122 67889999999999877542    2


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      +-.++|++||.....                        +..+...|+.+|...+.+++.++.+.   +++++.++|+.+
T Consensus       131 ~~g~ii~isS~~~~~------------------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~  186 (256)
T PRK12743        131 QGGRIINITSVHEHT------------------------PLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAI  186 (256)
T ss_pred             CCeEEEEEeeccccC------------------------CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCc
Confidence            135899999974221                        22234589999999999998887653   799999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE-EEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY-ICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y-~~~~  223 (293)
                      .++......    ..........   ...          ..+.+.+|++.++..++....  ..|.+ .++|
T Consensus       187 ~t~~~~~~~----~~~~~~~~~~---~~~----------~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dg  241 (256)
T PRK12743        187 ATPMNGMDD----SDVKPDSRPG---IPL----------GRPGDTHEIASLVAWLCSEGASYTTGQSLIVDG  241 (256)
T ss_pred             cCccccccC----hHHHHHHHhc---CCC----------CCCCCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            887532110    1111111110   111          124578999999988886543  23544 5544

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.07  E-value=3.2e-09  Score=86.17  Aligned_cols=147  Identities=17%  Similarity=0.063  Sum_probs=104.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCCC-----CccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSD-----DPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||.......     ......++.|+.+...+++++.    +.+ 
T Consensus        53 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-  131 (248)
T PRK08251         53 IKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-  131 (248)
T ss_pred             ceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            368889999999988776654       58999999987542210     1112567899999988888764    445 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..+||++||.....+.+                       .+...|+.+|...+.+++.++.+.   ++++++++|+.+.
T Consensus       132 ~~~iv~~sS~~~~~~~~-----------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~  188 (248)
T PRK08251        132 SGHLVLISSVSAVRGLP-----------------------GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIR  188 (248)
T ss_pred             CCeEEEEeccccccCCC-----------------------CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCc
Confidence            67999999976443221                       123579999999999988887653   7899999999986


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ++.....             +.               ....+..+|.|+.++.+++..
T Consensus       189 t~~~~~~-------------~~---------------~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        189 SEMNAKA-------------KS---------------TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             chhhhcc-------------cc---------------CCccCCHHHHHHHHHHHHhcC
Confidence            5532110             00               122466899999999999864

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.06  E-value=2.7e-09  Score=87.48  Aligned_cols=158  Identities=16%  Similarity=0.096  Sum_probs=106.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc-----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK-----T   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~-----~   76 (293)
                      .++.++.+|+++++++.++++       ++|+|||+|+.....      ..+.. ..+..|+.++.++++++..     .
T Consensus        59 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  137 (263)
T PRK07814         59 RRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLA-DAFTFNVATAHALTVAAVPLMLEHS  137 (263)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHhhcHHHHHHHHHHHHHHHhhc
Confidence            368889999999998877654       689999999864211      11223 6788999999999999863     3


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCc
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLM  154 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v  154 (293)
                      + ..+||++||.....+                        ..+...|+.+|...+.+++.++.+.  +++++.++|+.+
T Consensus       138 ~-~g~iv~~sS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v  192 (263)
T PRK07814        138 G-GGSVINISSTMGRLA------------------------GRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSI  192 (263)
T ss_pred             C-CeEEEEEccccccCC------------------------CCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCC
Confidence            3 578999999753221                        1234589999999999999988764  578889999888


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ..+...... .. ..+...+.+...             ...+...+|++++++.++...
T Consensus       193 ~t~~~~~~~-~~-~~~~~~~~~~~~-------------~~~~~~~~~va~~~~~l~~~~  236 (263)
T PRK07814        193 LTSALEVVA-AN-DELRAPMEKATP-------------LRRLGDPEDIAAAAVYLASPA  236 (263)
T ss_pred             cCchhhhcc-CC-HHHHHHHHhcCC-------------CCCCcCHHHHHHHHHHHcCcc
Confidence            654321100 00 111111111110             122467899999999988653

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.06  E-value=4.9e-09  Score=85.71  Aligned_cols=161  Identities=16%  Similarity=0.101  Sum_probs=106.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC---CCc--cccchhHHHHHHHHHHHHHhcC----CCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS---DDP--ETDMIKPAIQGVVNVLKACTKT----KTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~---~~~--~~~~~~~n~~~~~~l~~~~~~~----~~~   79 (293)
                      ++.++.+|+++++++.++++       ++|+|||+|+......   ...  .+..+..|+.++.++++++.+.    +..
T Consensus        57 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  136 (260)
T PRK06198         57 KAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAE  136 (260)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC
Confidence            57789999999998877764       5899999998753211   111  1256889999999988877532    213


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .++|++||...+.+.+                        ....|+.+|...|.+++.++.+.   +++++.++|+++.+
T Consensus       137 g~iv~~ss~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t  192 (260)
T PRK06198        137 GTIVNIGSMSAHGGQP------------------------FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMAT  192 (260)
T ss_pred             CEEEEECCcccccCCC------------------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccC
Confidence            5799999976432211                        23479999999999999887654   68999999999988


Q ss_pred             CCCCC---CCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          157 PSLTP---DIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       157 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +....   ........+........      .       ...+++.+|+++++..++...
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~a~~~~~l~~~~  239 (260)
T PRK06198        193 EGEDRIQREFHGAPDDWLEKAAATQ------P-------FGRLLDPDEVARAVAFLLSDE  239 (260)
T ss_pred             cchhhhhhhccCCChHHHHHHhccC------C-------ccCCcCHHHHHHHHHHHcChh
Confidence            75321   00000011111111110      0       133678999999999988654

>PRK09242 tropinone reductase; Provisional

Probab=99.06  E-value=5.4e-09  Score=85.32  Aligned_cols=158  Identities=14%  Similarity=0.136  Sum_probs=105.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC------CCCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF------SSDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++.+|+++.+++.++++       ++|+|||+||....      ...+.. ..+..|+.++..+++++.    +.+
T Consensus        60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  138 (257)
T PRK09242         60 REVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWR-GIFETNLFSAFELSRYAHPLLKQHA  138 (257)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHhhhhHHHHHHHHHHHHHHHhcC
Confidence            368889999999987766553       58999999986421      111222 678899999999988774    344


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..++|++||...+.+                        ..+...|+.+|...+.+++.++.+   .+++++.++|+.+
T Consensus       139 -~~~ii~~sS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i  193 (257)
T PRK09242        139 -SSAIVNIGSVSGLTH------------------------VRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYI  193 (257)
T ss_pred             -CceEEEECccccCCC------------------------CCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCC
Confidence             579999999753321                        123357999999999999988755   3899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .++....... . ..+.........             ..-+...+|++.++..++...
T Consensus       194 ~t~~~~~~~~-~-~~~~~~~~~~~~-------------~~~~~~~~~va~~~~~l~~~~  237 (257)
T PRK09242        194 RTPLTSGPLS-D-PDYYEQVIERTP-------------MRRVGEPEEVAAAVAFLCMPA  237 (257)
T ss_pred             CCcccccccC-C-hHHHHHHHhcCC-------------CCCCcCHHHHHHHHHHHhCcc
Confidence            8775332111 1 111111111110             111345799999998888653

>PRK07069 short chain dehydrogenase; Validated

Probab=99.06  E-value=2.7e-09  Score=86.71  Aligned_cols=158  Identities=18%  Similarity=0.208  Sum_probs=103.5

Q ss_pred             eEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHH----HHHHHHHHHhcCCCc
Q 035985           17 LKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQ----GVVNVLKACTKTKTV   79 (293)
Q Consensus        17 v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~----~~~~l~~~~~~~~~~   79 (293)
                      +..+++|++|++++.++++       ++|+|||+|+......      .+.. ..++.|+.    ++..++.++++.+ .
T Consensus        53 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~-~  130 (251)
T PRK07069         53 AFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWR-RVMAINVESIFLGCKHALPYLRASQ-P  130 (251)
T ss_pred             EEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHhhcC-C
Confidence            4568899999998877654       5799999998764221      1112 55667877    6777888887776 7


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-----CceEEEEccCCc
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-----NIDLITVIPSLM  154 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-----~~~~~ilR~~~v  154 (293)
                      ++||++||...+.+.+                        ....|+.+|...+.+++.++.+.     +++++.++|+.+
T Consensus       131 ~~ii~~ss~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v  186 (251)
T PRK07069        131 ASIVNISSVAAFKAEP------------------------DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFI  186 (251)
T ss_pred             cEEEEecChhhccCCC------------------------CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeeccc
Confidence            8999999986433211                        22479999999999999887652     488999999998


Q ss_pred             cCCCCCCCCCcc-HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSS-VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .++......... ............   .          ...+.+++|++++++.++..+
T Consensus       187 ~t~~~~~~~~~~~~~~~~~~~~~~~---~----------~~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        187 RTGIVDPIFQRLGEEEATRKLARGV---P----------LGRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             CCcchhHHhhhccchhHHHHHhccC---C----------CCCCcCHHHHHHHHHHHcCcc
Confidence            877532210000 000001111100   0          123567999999999887654

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.05  E-value=7.6e-10  Score=89.45  Aligned_cols=175  Identities=19%  Similarity=0.161  Sum_probs=109.1

Q ss_pred             eEEEecCCCCCcchhhhhc----CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcC-CCccEEEEecccchh
Q 035985           17 LKIFRADLTDEASFDAPIS----RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT-KTVKRVILTSSAAAV   91 (293)
Q Consensus        17 v~~v~~Dl~d~~~~~~~~~----~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~   91 (293)
                      .+++++|++|.+++.++++    ++|+|||+||....  .... ..+++|+.++..+++++... .+..+||++||...+
T Consensus        25 ~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~--~~~~-~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~  101 (241)
T PRK12428         25 DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT--APVE-LVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGA  101 (241)
T ss_pred             hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC--CCHH-HhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhh
Confidence            3567899999998888876    58999999997532  2344 78999999999999988753 113699999998744


Q ss_pred             cccccCCCCccccCCC---CCchh---hh-ccCCCCCchhHHHHHHHHHHHHHHH-H---hCCceEEEEccCCccCCCCC
Q 035985           92 SINAQNVTGLVMDEKN---WTDVE---FL-SSEKPPTWGYAASKTLAERAACKFA-Q---ENNIDLITVIPSLMSGPSLT  160 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~~---~~~~~---~~-~~~~~p~~~Y~~~K~~~E~~~~~~~-~---~~~~~~~ilR~~~v~G~~~~  160 (293)
                      .....    .+..|..   .....   +. ..+......|+.+|...+.+.+.++ .   ..|+++++++|+.+.++...
T Consensus       102 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~  177 (241)
T PRK12428        102 EWPQR----LELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILG  177 (241)
T ss_pred             ccccc----hHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccc
Confidence            21110    1111110   00000   00 0022345689999999999998887 3   34899999999999877432


Q ss_pred             CCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          161 PDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ... .....  .......  .+          ...+...+|+|++++.++...
T Consensus       178 ~~~-~~~~~--~~~~~~~--~~----------~~~~~~pe~va~~~~~l~s~~  215 (241)
T PRK12428        178 DFR-SMLGQ--ERVDSDA--KR----------MGRPATADEQAAVLVFLCSDA  215 (241)
T ss_pred             cch-hhhhh--Hhhhhcc--cc----------cCCCCCHHHHHHHHHHHcChh
Confidence            110 00000  0000000  00          112456899999999988643

>PRK06196 oxidoreductase; Provisional

Probab=99.05  E-value=2.6e-09  Score=89.84  Aligned_cols=130  Identities=21%  Similarity=0.176  Sum_probs=89.1

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC----CCCccccchhHHHHHHHHHHH----HHhcCCCcc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS----SDDPETDMIKPAIQGVVNVLK----ACTKTKTVK   80 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~   80 (293)
                      ++.++++|++|.+++.++++       ++|+|||+||.....    ..... ..+.+|+.++..+++    .+++.+ ..
T Consensus        72 ~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~ll~~l~~~~-~~  149 (315)
T PRK06196         72 GVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWE-AQFATNHLGHFALVNLLWPALAAGA-GA  149 (315)
T ss_pred             hCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHH-HHHHHhhHHHHHHHHHHHHHHHhcC-CC
Confidence            47899999999998877663       589999999975321    11223 678899999666555    444554 57


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~  157 (293)
                      ++|++||.....+..      ..++..+  .    .+..+...|+.+|...+.+.+.++++   .|+++++++|+.+.++
T Consensus       150 ~iV~vSS~~~~~~~~------~~~~~~~--~----~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~  217 (315)
T PRK06196        150 RVVALSSAGHRRSPI------RWDDPHF--T----RGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTP  217 (315)
T ss_pred             eEEEECCHHhccCCC------CccccCc--c----CCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCC
Confidence            999999975322111      1111000  0    02234468999999999999888664   3899999999999888


Q ss_pred             CC
Q 035985          158 SL  159 (293)
Q Consensus       158 ~~  159 (293)
                      ..
T Consensus       218 ~~  219 (315)
T PRK06196        218 LQ  219 (315)
T ss_pred             cc
Confidence            54

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.04  E-value=4.7e-09  Score=85.56  Aligned_cols=157  Identities=16%  Similarity=0.145  Sum_probs=106.7

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~   78 (293)
                      ++..+.+|++|++++.++++       .+|+|||+|+.....      ..+.. ..++.|+.++..+++++..    .+ 
T Consensus        59 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~-  136 (254)
T PRK08085         59 KAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWN-DVIAVNQTAVFLVSQAVARYMVKRQ-  136 (254)
T ss_pred             eEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            57788999999998877664       489999999864311      11222 5788999998888887654    33 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..+||++||.....+                        ..+...|+.+|...+.+++.++.+.   |+++.+++|+.+.
T Consensus       137 ~~~iv~isS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~  192 (254)
T PRK08085        137 AGKIINICSMQSELG------------------------RDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFK  192 (254)
T ss_pred             CcEEEEEccchhccC------------------------CCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCC
Confidence            578999999753221                        1223589999999999999987654   8999999999998


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+....... . ..+...+... .+            ..-+...+|++.++..++...
T Consensus       193 t~~~~~~~~-~-~~~~~~~~~~-~p------------~~~~~~~~~va~~~~~l~~~~  235 (254)
T PRK08085        193 TEMTKALVE-D-EAFTAWLCKR-TP------------AARWGDPQELIGAAVFLSSKA  235 (254)
T ss_pred             Ccchhhhcc-C-HHHHHHHHhc-CC------------CCCCcCHHHHHHHHHHHhCcc
Confidence            874322110 0 1111111111 10            123567899999998888753

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.04  E-value=3.5e-09  Score=85.93  Aligned_cols=161  Identities=18%  Similarity=0.151  Sum_probs=104.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC--CCCc----cccchhHHHHHHHHHHHHHhcC-C---
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS--SDDP----ETDMIKPAIQGVVNVLKACTKT-K---   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~--~~~~----~~~~~~~n~~~~~~l~~~~~~~-~---   77 (293)
                      .++.++++|+++++++.++++       .+|+|||+||.....  ..+.    ....+..|+.++..+++++.+. .   
T Consensus        52 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  131 (248)
T PRK06947         52 GRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDR  131 (248)
T ss_pred             CcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC
Confidence            368899999999988776653       589999999965311  1111    1256889999988887544322 1   


Q ss_pred             --CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccC
Q 035985           78 --TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPS  152 (293)
Q Consensus        78 --~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~  152 (293)
                        +-.+||++||....++...                       ....|+.+|...+.+++.++.+.   +++++++||+
T Consensus       132 ~~~~~~ii~~sS~~~~~~~~~-----------------------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg  188 (248)
T PRK06947        132 GGRGGAIVNVSSIASRLGSPN-----------------------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPG  188 (248)
T ss_pred             CCCCcEEEEECchhhcCCCCC-----------------------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEecc
Confidence              0236999999764443211                       12369999999999998887764   7999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      .+..+......  .. ...... +....  .          .-...++|+++.++.++..+.
T Consensus       189 ~v~t~~~~~~~--~~-~~~~~~-~~~~~--~----------~~~~~~e~va~~~~~l~~~~~  234 (248)
T PRK06947        189 LIETEIHASGG--QP-GRAARL-GAQTP--L----------GRAGEADEVAETIVWLLSDAA  234 (248)
T ss_pred             CcccccccccC--CH-HHHHHH-hhcCC--C----------CCCcCHHHHHHHHHHHcCccc
Confidence            99877432111  00 111111 11110  0          113568999999999887654

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.04  E-value=5.6e-09  Score=84.95  Aligned_cols=166  Identities=17%  Similarity=0.165  Sum_probs=108.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC---------------CCccccchhHHHHHHHHHHHH
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS---------------DDPETDMIKPAIQGVVNVLKA   72 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~---------------~~~~~~~~~~n~~~~~~l~~~   72 (293)
                      .++.++++|+++.+++.++++       .+|+|||+||......               .... .++..|+.++..++++
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~  132 (253)
T PRK08217         54 TEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQ-SVIDVNLTGVFLCGRE  132 (253)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHH-HHHhhhhHHHHHHHHH
Confidence            467889999999987766554       4799999998643110               1111 4667888888776654


Q ss_pred             Hh----cCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCce
Q 035985           73 CT----KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNID  145 (293)
Q Consensus        73 ~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~  145 (293)
                      +.    +...-.++|++||.. .++..                        +...|+.+|...+.+++.++.+   .+++
T Consensus       133 ~~~~l~~~~~~~~iv~~ss~~-~~~~~------------------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~  187 (253)
T PRK08217        133 AAAKMIESGSKGVIINISSIA-RAGNM------------------------GQTNYSASKAGVAAMTVTWAKELARYGIR  187 (253)
T ss_pred             HHHHHHhcCCCeEEEEEcccc-ccCCC------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcE
Confidence            43    222135789998875 33221                        2357999999999999988764   4899


Q ss_pred             EEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEec
Q 035985          146 LITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICCA  223 (293)
Q Consensus       146 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~~  223 (293)
                      ++.++|+.+.++.....    .............             ...+.+++|+++++..++......| .|+++|
T Consensus       188 v~~v~pg~v~t~~~~~~----~~~~~~~~~~~~~-------------~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~g  249 (253)
T PRK08217        188 VAAIAPGVIETEMTAAM----KPEALERLEKMIP-------------VGRLGEPEEIAHTVRFIIENDYVTGRVLEIDG  249 (253)
T ss_pred             EEEEeeCCCcCcccccc----CHHHHHHHHhcCC-------------cCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCC
Confidence            99999999987653221    1111111111110             2346789999999999887654344 566544

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.03  E-value=1.4e-08  Score=82.69  Aligned_cols=159  Identities=16%  Similarity=0.153  Sum_probs=104.0

Q ss_pred             CeEEEecCCCCCcchhhhhc-------------CCCEEEEecccCCCC-CCC-c---cccchhHHHHHHHHHHHHHhcCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------------RSDIVFHVATPVNFS-SDD-P---ETDMIKPAIQGVVNVLKACTKTK   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------------~~d~Vih~a~~~~~~-~~~-~---~~~~~~~n~~~~~~l~~~~~~~~   77 (293)
                      .+..+.+|+++.+++..+++             .+|++||+||..... ..+ .   .+.+++.|+.++..+++++...-
T Consensus        55 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~  134 (252)
T PRK12747         55 SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRL  134 (252)
T ss_pred             ceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence            56788899999876554331             589999999964321 111 1   12677799999999998776531


Q ss_pred             -CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           78 -TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        78 -~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                       ...+||++||.....+.                        .....|+.+|...+.+++.++.++   |+++..+.|+.
T Consensus       135 ~~~g~iv~isS~~~~~~~------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~  190 (252)
T PRK12747        135 RDNSRIINISSAATRISL------------------------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGF  190 (252)
T ss_pred             hcCCeEEEECCcccccCC------------------------CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCC
Confidence             13589999998632211                        123579999999999999887654   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +.++........  ... ........     .       ...+.+++|+++++..++...
T Consensus       191 v~t~~~~~~~~~--~~~-~~~~~~~~-----~-------~~~~~~~~dva~~~~~l~s~~  235 (252)
T PRK12747        191 IKTDMNAELLSD--PMM-KQYATTIS-----A-------FNRLGEVEDIADTAAFLASPD  235 (252)
T ss_pred             ccCchhhhcccC--HHH-HHHHHhcC-----c-------ccCCCCHHHHHHHHHHHcCcc
Confidence            987643211000  000 10000000     0       133678999999999988643

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.02  E-value=1.1e-08  Score=83.38  Aligned_cols=164  Identities=17%  Similarity=0.162  Sum_probs=107.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC---CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT---KT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~   78 (293)
                      .+++++.+|+++.+++.++++       .+|+|||+|+......      .+.. ..+..|+.++..+++++...   ..
T Consensus        67 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  145 (256)
T PRK12748         67 VRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLD-KHYAVNVRATMLLSSAFAKQYDGKA  145 (256)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHhhhcC
Confidence            358899999999988766654       4799999998753211      1122 56889999999999887532   11


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..+||++||...+.+                        ......|+.+|...+.+++.++.+   .+++++.++|+.+.
T Consensus       146 ~~~iv~~ss~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~  201 (256)
T PRK12748        146 GGRIINLTSGQSLGP------------------------MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTD  201 (256)
T ss_pred             CeEEEEECCccccCC------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCccc
Confidence            468999999753221                        112347999999999999888765   38999999999876


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .+....       .........   ..          ...+...+|+++++..++....  ..| .+++++
T Consensus       202 t~~~~~-------~~~~~~~~~---~~----------~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  252 (256)
T PRK12748        202 TGWITE-------ELKHHLVPK---FP----------QGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEG  252 (256)
T ss_pred             CCCCCh-------hHHHhhhcc---CC----------CCCCcCHHHHHHHHHHHhCcccccccCCEEEecC
Confidence            543211       111111110   00          1113457999999988876532  234 445543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.02  E-value=6.2e-09  Score=85.42  Aligned_cols=159  Identities=23%  Similarity=0.206  Sum_probs=106.4

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      ++.++++|++|.+++.++++       .+|+|||+||.....      ..+. ...+..|+.++..+++++.    +.+ 
T Consensus        60 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~-  137 (265)
T PRK07097         60 EAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDF-RQVIDIDLNAPFIVSKAVIPSMIKKG-  137 (265)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHhhhHHHHHHHHHHHHHHHhcC-
Confidence            68899999999998887764       489999999975421      1112 2667789988887777654    344 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..+||++||....++.                        .+...|+.+|...+.+++.++.+.   |++++.++|+.+.
T Consensus       138 ~g~iv~isS~~~~~~~------------------------~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~  193 (265)
T PRK07097        138 HGKIINICSMMSELGR------------------------ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIA  193 (265)
T ss_pred             CcEEEEEcCccccCCC------------------------CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEecccc
Confidence            5799999997533321                        123589999999999999998765   8999999999998


Q ss_pred             CCCCCCCCC----ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIP----SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+.......    .....+...+....      .       ...+...+|+++.++.++...
T Consensus       194 t~~~~~~~~~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~dva~~~~~l~~~~  242 (265)
T PRK07097        194 TPQTAPLRELQADGSRHPFDQFIIAKT------P-------AARWGDPEDLAGPAVFLASDA  242 (265)
T ss_pred             ccchhhhhhccccccchhHHHHHHhcC------C-------ccCCcCHHHHHHHHHHHhCcc
Confidence            774321100    00000001000000      0       122566899999999998763

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.02  E-value=1.7e-08  Score=82.09  Aligned_cols=169  Identities=15%  Similarity=0.120  Sum_probs=108.7

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC---CCCc---cccchhHHHHHHHHHHHHH----hcCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS---SDDP---ETDMIKPAIQGVVNVLKAC----TKTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~---~~~~---~~~~~~~n~~~~~~l~~~~----~~~~~   78 (293)
                      ++..+++|+++.+++.++++       .+|+|||+|+.....   ....   .+..++.|+.+...+++++    ++.+ 
T Consensus        58 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-  136 (252)
T PRK07035         58 KAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-  136 (252)
T ss_pred             eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-
Confidence            57889999999988776654       589999999864210   0111   1257889999988877766    4444 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..++|++||.....+                        ..+...|+.+|...+.+++.++.+.   |++++.+.|+.+-
T Consensus       137 ~~~iv~~sS~~~~~~------------------------~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~  192 (252)
T PRK07035        137 GGSIVNVASVNGVSP------------------------GDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTD  192 (252)
T ss_pred             CcEEEEECchhhcCC------------------------CCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeecccc
Confidence            679999999753321                        1233589999999999999987654   7999999999886


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CCc-EEEecc
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SGR-YICCAV  224 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~~-y~~~~~  224 (293)
                      .+........  ............             ...+...+|+++++..++.+...  .|. +.+.|.
T Consensus       193 t~~~~~~~~~--~~~~~~~~~~~~-------------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        193 TKFASALFKN--DAILKQALAHIP-------------LRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             CcccccccCC--HHHHHHHHccCC-------------CCCcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            5432211100  111111111110             12245689999999998876532  343 355443

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.01  E-value=2.5e-08  Score=82.19  Aligned_cols=117  Identities=17%  Similarity=0.192  Sum_probs=86.3

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc---CCCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK---TKTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~---~~~~   79 (293)
                      ++.++.+|+++.+.+.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++..   .+ .
T Consensus        45 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~-~  122 (274)
T PRK05693         45 GFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMR-RQFETNVFAVVGVTRALFPLLRRS-R  122 (274)
T ss_pred             CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhhc-C
Confidence            57889999999988877653       5899999999653211      1122 5788999999888887743   23 3


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      .++|++||.....+.                        .....|+.+|...+.+++.++.+   .|+++++++|+.+..
T Consensus       123 g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t  178 (274)
T PRK05693        123 GLVVNIGSVSGVLVT------------------------PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIAS  178 (274)
T ss_pred             CEEEEECCccccCCC------------------------CCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccc
Confidence            689999997543321                        12347999999999988887654   489999999999976


Q ss_pred             CC
Q 035985          157 PS  158 (293)
Q Consensus       157 ~~  158 (293)
                      +.
T Consensus       179 ~~  180 (274)
T PRK05693        179 QF  180 (274)
T ss_pred             cc
Confidence            53

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.01  E-value=1.1e-08  Score=83.40  Aligned_cols=158  Identities=21%  Similarity=0.187  Sum_probs=101.7

Q ss_pred             EEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC----CC---ccccchhHHHHHHHHHHHHHh----cCCCc
Q 035985           18 KIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS----DD---PETDMIKPAIQGVVNVLKACT----KTKTV   79 (293)
Q Consensus        18 ~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~----~~---~~~~~~~~n~~~~~~l~~~~~----~~~~~   79 (293)
                      .++++|++|.+.+.++++       ++|+|||+|+......    ..   ..+..++.|+.++..+++.+.    +.+ .
T Consensus        54 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~  132 (255)
T PRK06057         54 LFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-K  132 (255)
T ss_pred             cEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-C
Confidence            678999999998887775       5799999998643110    00   112677889999887777654    344 4


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      .++|++||....++..                       .+...|+.+|...+.+++.++.+   .++++++++|+.+.+
T Consensus       133 g~iv~~sS~~~~~g~~-----------------------~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t  189 (255)
T PRK06057        133 GSIINTASFVAVMGSA-----------------------TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNT  189 (255)
T ss_pred             cEEEEEcchhhccCCC-----------------------CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCC
Confidence            6899999865343221                       12347999998888777765543   389999999999987


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +..............+.+.    .++          ...+..++|+++++..++...
T Consensus       190 ~~~~~~~~~~~~~~~~~~~----~~~----------~~~~~~~~~~a~~~~~l~~~~  232 (255)
T PRK06057        190 PLLQELFAKDPERAARRLV----HVP----------MGRFAEPEEIAAAVAFLASDD  232 (255)
T ss_pred             chhhhhccCCHHHHHHHHh----cCC----------CCCCcCHHHHHHHHHHHhCcc
Confidence            7533211111111111100    011          124688999999998877653

>PRK06398 aldose dehydrogenase; Validated

Probab=99.01  E-value=7.1e-09  Score=84.71  Aligned_cols=117  Identities=17%  Similarity=0.242  Sum_probs=87.3

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--C-C--ccccchhHHHHHHHHHHHHHhc----CCCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--D-D--PETDMIKPAIQGVVNVLKACTK----TKTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~-~--~~~~~~~~n~~~~~~l~~~~~~----~~~~   79 (293)
                      ++.++++|++|++++.++++       .+|+|||+||......  . +  ..+..++.|+.++..+++++..    .+ .
T Consensus        45 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~  123 (258)
T PRK06398         45 DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-K  123 (258)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            57889999999998877764       5899999998753211  1 1  1125678999999888887753    34 5


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccCC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSGP  157 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~  157 (293)
                      .++|++||.....                        +..+...|+.+|...+.+.+.++.+.  ++++..++|+.+-.+
T Consensus       124 g~iv~isS~~~~~------------------------~~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~  179 (258)
T PRK06398        124 GVIINIASVQSFA------------------------VTRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTP  179 (258)
T ss_pred             eEEEEeCcchhcc------------------------CCCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence            7999999976332                        11234589999999999999988765  489999999988654

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.01  E-value=1.7e-09  Score=87.36  Aligned_cols=148  Identities=19%  Similarity=0.248  Sum_probs=105.4

Q ss_pred             CCeEEEecCCCCCcchhhhhcC----CCEEEEecccCCCCC---CCc--cccchhHHHHHHHHHHHHHhcC-CCccEEEE
Q 035985           15 GELKIFRADLTDEASFDAPISR----SDIVFHVATPVNFSS---DDP--ETDMIKPAIQGVVNVLKACTKT-KTVKRVIL   84 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~----~d~Vih~a~~~~~~~---~~~--~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~   84 (293)
                      .++.++++|++|.+++.+++++    +|.+||+|+......   .+.  .+..++.|+.++.++++++... .+..++|+
T Consensus        46 ~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~  125 (240)
T PRK06101         46 ANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVI  125 (240)
T ss_pred             CCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEE
Confidence            4688999999999998888764    689999998543111   111  1257899999999999988753 11357999


Q ss_pred             ecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH---hCCceEEEEccCCccCCCCCC
Q 035985           85 TSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ---ENNIDLITVIPSLMSGPSLTP  161 (293)
Q Consensus        85 ~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~~~~~  161 (293)
                      +||....++.                        .....|+.+|...+.+++.++.   ..|++++++||+.++++....
T Consensus       126 isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~  181 (240)
T PRK06101        126 VGSIASELAL------------------------PRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK  181 (240)
T ss_pred             EechhhccCC------------------------CCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC
Confidence            9986533321                        1234799999999999988764   348999999999998864321


Q ss_pred             CCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          162 DIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .               .  .   .       ....+..+|+++.++.+++..
T Consensus       182 ~---------------~--~---~-------~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        182 N---------------T--F---A-------MPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             C---------------C--C---C-------CCcccCHHHHHHHHHHHHhcC
Confidence            0               0  0   0       011356899999999999875

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.01  E-value=4.9e-09  Score=85.61  Aligned_cols=171  Identities=18%  Similarity=0.192  Sum_probs=107.4

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC------CCCCccccchhHHHHHHHHHHHHHhcC-CCccE
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF------SSDDPETDMIKPAIQGVVNVLKACTKT-KTVKR   81 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~   81 (293)
                      ++.++++|+++++++.++++       ++|++||+||....      ...+.. ..++.|+.++..+++++... ....+
T Consensus        62 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~~~~~~~~~~~~~~~  140 (257)
T PRK12744         62 KAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYD-EMFAVNSKSAFFFIKEAGRHLNDNGK  140 (257)
T ss_pred             cEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHH-HHHhhhhhHHHHHHHHHHHhhccCCC
Confidence            68889999999998887764       58999999997421      111222 67889999999999888643 11245


Q ss_pred             EEEe-cccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCC
Q 035985           82 VILT-SSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGP  157 (293)
Q Consensus        82 ~v~~-SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~  157 (293)
                      ++++ ||....+.                         .....|+.+|...|.+++.++.+.   ++++++++|+.+.++
T Consensus       141 iv~~~ss~~~~~~-------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~  195 (257)
T PRK12744        141 IVTLVTSLLGAFT-------------------------PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTP  195 (257)
T ss_pred             EEEEecchhcccC-------------------------CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccc
Confidence            6665 44321110                         112479999999999999998764   699999999998766


Q ss_pred             CCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcEEEec
Q 035985          158 SLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRYICCA  223 (293)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y~~~~  223 (293)
                      ...+....  .. ... .....  ....     .....+.+++|+++++..+++...  .+..+++++
T Consensus       196 ~~~~~~~~--~~-~~~-~~~~~--~~~~-----~~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~g  252 (257)
T PRK12744        196 FFYPQEGA--EA-VAY-HKTAA--ALSP-----FSKTGLTDIEDIVPFIRFLVTDGWWITGQTILING  252 (257)
T ss_pred             hhcccccc--ch-hhc-ccccc--cccc-----cccCCCCCHHHHHHHHHHhhcccceeecceEeecC
Confidence            42221100  00 000 00000  0000     112347889999999999998532  233555543

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.00  E-value=5.3e-09  Score=85.15  Aligned_cols=169  Identities=16%  Similarity=0.145  Sum_probs=109.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++++|+++++++.++++       ++|+|||+||......      .+. +..++.|+.++..+++++..    .+
T Consensus        47 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~  125 (252)
T PRK07856         47 RPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFH-EKIVELNLLAPLLVAQAANAVMQQQP  125 (252)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            368899999999998887764       4699999998653211      112 26788999999999988753    21


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCcc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMS  155 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~  155 (293)
                      ...+||++||.....+.                        .....|+.+|...+.+++.++.++  .+++..++|+.+.
T Consensus       126 ~~g~ii~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~  181 (252)
T PRK07856        126 GGGSIVNIGSVSGRRPS------------------------PGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVR  181 (252)
T ss_pred             CCcEEEEEcccccCCCC------------------------CCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEecccc
Confidence            14689999997633211                        123589999999999999988764  3889999999887


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE-EEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY-ICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y-~~~~  223 (293)
                      .+........  ......+... .  +          ..-+...+|++++++.++....  ..|.. .+.|
T Consensus       182 t~~~~~~~~~--~~~~~~~~~~-~--~----------~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdg  237 (252)
T PRK07856        182 TEQSELHYGD--AEGIAAVAAT-V--P----------LGRLATPADIAWACLFLASDLASYVSGANLEVHG  237 (252)
T ss_pred             ChHHhhhccC--HHHHHHHhhc-C--C----------CCCCcCHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence            6532111000  0001111111 0  0          1224568999999999887532  34433 4543

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.00  E-value=1.4e-08  Score=82.73  Aligned_cols=145  Identities=13%  Similarity=0.125  Sum_probs=99.2

Q ss_pred             CeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCCCCCcc-----ccchhHHHHHHHH----HHHHHhcCCCcc
Q 035985           16 ELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFSSDDPE-----TDMIKPAIQGVVN----VLKACTKTKTVK   80 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~~~~~~-----~~~~~~n~~~~~~----l~~~~~~~~~~~   80 (293)
                      +++++.+|++|.+++.++++      ++|++||++|..........     .+.++.|+.++..    ++..+++.+ ..
T Consensus        61 ~v~~~~~D~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~  139 (253)
T PRK07904         61 SVEVIDFDALDTDSHPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FG  139 (253)
T ss_pred             ceEEEEecCCChHHHHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-Cc
Confidence            68999999999987665543      69999999987532211111     1357888887766    566666666 68


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH---hCCceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ---ENNIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~---~~~~~~~ilR~~~v~G~  157 (293)
                      +||++||.....+.                        .+...|+.+|.....+.+.++.   .+++++++++|+.+..+
T Consensus       140 ~iv~isS~~g~~~~------------------------~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~  195 (253)
T PRK07904        140 QIIAMSSVAGERVR------------------------RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTR  195 (253)
T ss_pred             eEEEEechhhcCCC------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecc
Confidence            99999997532110                        1224799999999977776643   34899999999998764


Q ss_pred             CCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          158 SLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ....            . .        .       ....+..+|+|+.++.++.++
T Consensus       196 ~~~~------------~-~--------~-------~~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        196 MSAH------------A-K--------E-------APLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             hhcc------------C-C--------C-------CCCCCCHHHHHHHHHHHHHcC
Confidence            2110            0 0        0       011356899999999999865

>PRK06484 short chain dehydrogenase; Validated

Probab=99.00  E-value=4.5e-09  Score=94.69  Aligned_cols=171  Identities=22%  Similarity=0.247  Sum_probs=111.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC--C-----CCCccccchhHHHHHHHHHHHHHhcC-CCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF--S-----SDDPETDMIKPAIQGVVNVLKACTKT-KTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~--~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~   79 (293)
                      .++..+.+|++|++++.++++       .+|++||+||....  .     ..+.. .++++|+.++..+++++... .+.
T Consensus       315 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~  393 (520)
T PRK06484        315 DEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFT-RVYDVNLSGAFACARAAARLMSQG  393 (520)
T ss_pred             CceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHH-HHHHhCcHHHHHHHHHHHHHhccC
Confidence            357788999999998887764       48999999997521  1     11122 67889999999998887653 113


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .+||++||.....+.                        .+...|+.+|...+.+++.++.+.   |++++.+.|+.+..
T Consensus       394 g~iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t  449 (520)
T PRK06484        394 GVIVNLGSIASLLAL------------------------PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIET  449 (520)
T ss_pred             CEEEEECchhhcCCC------------------------CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccC
Confidence            689999998643221                        123589999999999999987664   79999999999877


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      +......... ......+...   .+          ..-+..++|+|++++.++....  ..| .+.+.|.
T Consensus       450 ~~~~~~~~~~-~~~~~~~~~~---~~----------~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        450 PAVLALKASG-RADFDSIRRR---IP----------LGRLGDPEEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             chhhhhcccc-HHHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            6422100000 0001111110   00          1124678999999999887542  234 4456544

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.00  E-value=8.3e-09  Score=84.31  Aligned_cols=158  Identities=19%  Similarity=0.223  Sum_probs=105.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++++|+++.+++.++++       .+|++||+|+.....      ..+.. ..++.|+.+...+++++.    +.+
T Consensus        63 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~  141 (258)
T PRK06935         63 RKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWN-AVMDINLNSVYHLSQAVAKVMAKQG  141 (258)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhCHHHHHHHHHHHHHHHhcC
Confidence            468899999999998877765       589999999875321      11122 567889999877776654    444


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..++|++||...+.+.                        .....|+.+|...+.+++.++++.   |+++++++|+.+
T Consensus       142 -~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v  196 (258)
T PRK06935        142 -SGKIINIASMLSFQGG------------------------KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYI  196 (258)
T ss_pred             -CeEEEEECCHHhccCC------------------------CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccc
Confidence             5789999998633221                        122479999999999999988764   799999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ..+...... .. ......+.. .  ++          ..-+...+|++..+..++...
T Consensus       197 ~t~~~~~~~-~~-~~~~~~~~~-~--~~----------~~~~~~~~dva~~~~~l~s~~  240 (258)
T PRK06935        197 KTANTAPIR-AD-KNRNDEILK-R--IP----------AGRWGEPDDLMGAAVFLASRA  240 (258)
T ss_pred             cccchhhcc-cC-hHHHHHHHh-c--CC----------CCCCCCHHHHHHHHHHHcChh
Confidence            766422110 00 000011111 0  10          123566899999999888754

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=98.99  E-value=1.3e-08  Score=82.31  Aligned_cols=156  Identities=18%  Similarity=0.163  Sum_probs=102.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHH----HhcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKA----CTKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~----~~~~~   77 (293)
                      .++.++.+|++|++++.++++       .+|+|||+|+.....      ..++. ..++.|+.++..+++.    +++.+
T Consensus        50 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~  128 (242)
T TIGR01829        50 FDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWS-AVIDTNLNSVFNVTQPVIDGMRERG  128 (242)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            368899999999988776654       589999999865321      11122 5677898887775544    44555


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       .+++|++||.....+.                        .....|+.+|...+.+++.++++   .++++++++|+.+
T Consensus       129 -~~~iv~iss~~~~~~~------------------------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~  183 (242)
T TIGR01829       129 -WGRIINISSVNGQKGQ------------------------FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYI  183 (242)
T ss_pred             -CcEEEEEcchhhcCCC------------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCC
Confidence             6799999997532211                        12247999999999888887654   3899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .++......    ..+...+....   +          ...+...+|+++++..++..+
T Consensus       184 ~t~~~~~~~----~~~~~~~~~~~---~----------~~~~~~~~~~a~~~~~l~~~~  225 (242)
T TIGR01829       184 ATDMVMAMR----EDVLNSIVAQI---P----------VGRLGRPEEIAAAVAFLASEE  225 (242)
T ss_pred             cCccccccc----hHHHHHHHhcC---C----------CCCCcCHHHHHHHHHHHcCch
Confidence            876532211    11111121111   0          112345789999988777654

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06114 short chain dehydrogenase; Provisional

Probab=98.99  E-value=9e-09  Score=83.88  Aligned_cols=159  Identities=17%  Similarity=0.199  Sum_probs=105.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++..+.+|++|++++.++++       .+|+|||+||.....      ..+.. .+++.|+.++..+++++.    +.+
T Consensus        58 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  136 (254)
T PRK06114         58 RRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQ-TVMDINLTGVFLSCQAEARAMLENG  136 (254)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHH-HHHhhcchhhHHHHHHHHHHHHhcC
Confidence            367889999999998877664       479999999975421      11122 678899999877766653    344


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..++|++||.....+.+.                      .+...|+.+|...+.+++.++.+   .|+++.+++|+.+
T Consensus       137 -~~~iv~isS~~~~~~~~~----------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i  193 (254)
T PRK06114        137 -GGSIVNIASMSGIIVNRG----------------------LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYT  193 (254)
T ss_pred             -CcEEEEECchhhcCCCCC----------------------CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCc
Confidence             468999999764332210                      12357999999999999988764   3899999999998


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .++.....  .... ....... ..++            .-+..++|++..++.++...
T Consensus       194 ~t~~~~~~--~~~~-~~~~~~~-~~p~------------~r~~~~~dva~~~~~l~s~~  236 (254)
T PRK06114        194 ATPMNTRP--EMVH-QTKLFEE-QTPM------------QRMAKVDEMVGPAVFLLSDA  236 (254)
T ss_pred             cCcccccc--cchH-HHHHHHh-cCCC------------CCCcCHHHHHHHHHHHcCcc
Confidence            77643210  1111 1111111 1111            12456899999999988753

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=98.98  E-value=1.1e-08  Score=84.48  Aligned_cols=158  Identities=16%  Similarity=0.135  Sum_probs=103.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC---------------------CCccccchhHHHHHHH
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS---------------------DDPETDMIKPAIQGVV   67 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~---------------------~~~~~~~~~~n~~~~~   67 (293)
                      ++.++++|++|.+++.++++       .+|+|||+|+......                     .+. +..++.|+.++.
T Consensus        60 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~  138 (278)
T PRK08277         60 EALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGF-EFVFDLNLLGTL  138 (278)
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHH-HHHHhhhhHHHH
Confidence            57889999999988776654       6899999998542110                     112 256778888887


Q ss_pred             HHHHHH----hcCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-
Q 035985           68 NVLKAC----TKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-  142 (293)
Q Consensus        68 ~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-  142 (293)
                      .+++++    ++.+ ..+||++||...+.                        +..+...|+.+|...+.+++.++.+. 
T Consensus       139 ~~~~~~~~~~~~~~-~g~ii~isS~~~~~------------------------~~~~~~~Y~~sK~a~~~l~~~la~e~~  193 (278)
T PRK08277        139 LPTQVFAKDMVGRK-GGNIINISSMNAFT------------------------PLTKVPAYSAAKAAISNFTQWLAVHFA  193 (278)
T ss_pred             HHHHHHHHHHHhcC-CcEEEEEccchhcC------------------------CCCCCchhHHHHHHHHHHHHHHHHHhC
Confidence            665544    3444 57899999986332                        11233579999999999999988765 


Q ss_pred             --CceEEEEccCCccCCCCCCCC---CccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc
Q 035985          143 --NIDLITVIPSLMSGPSLTPDI---PSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK  212 (293)
Q Consensus       143 --~~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~  212 (293)
                        ++++..++|+.+..+......   ..........+....   +          ..-+...+|+|++++.++..
T Consensus       194 ~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---p----------~~r~~~~~dva~~~~~l~s~  255 (278)
T PRK08277        194 KVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHT---P----------MGRFGKPEELLGTLLWLADE  255 (278)
T ss_pred             ccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccC---C----------ccCCCCHHHHHHHHHHHcCc
Confidence              799999999999887432110   000000111111110   0          12256689999999998876

>PRK07102 short chain dehydrogenase; Provisional

Probab=98.98  E-value=6.9e-09  Score=83.96  Aligned_cols=146  Identities=16%  Similarity=0.177  Sum_probs=103.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc----CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CCCcc
Q 035985           15 GELKIFRADLTDEASFDAPIS----RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TKTVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~----~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~   80 (293)
                      .+++++++|++|++++.++++    .+|+|||++|......      .+.. ..++.|+.++.++++++..    .+ ..
T Consensus        51 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~-~~  128 (243)
T PRK07102         51 VAVSTHELDILDTASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPALAL-REFRTNFEGPIALLTLLANRFEARG-SG  128 (243)
T ss_pred             CeEEEEecCCCChHHHHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHH-HHHHhhhHHHHHHHHHHHHHHHhCC-CC
Confidence            478999999999998887765    4699999998653211      1112 5678999999998887653    34 67


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~  157 (293)
                      +||++||.....+.                        .....|+.+|...+.+++.++.+   .|+++++++|+.+.++
T Consensus       129 ~iv~~sS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~  184 (243)
T PRK07102        129 TIVGISSVAGDRGR------------------------ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTP  184 (243)
T ss_pred             EEEEEecccccCCC------------------------CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCh
Confidence            99999997532211                        11247999999999999888653   4899999999999875


Q ss_pred             CCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          158 SLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ....               ..  .   .       ..-....+|+++.++.+++.+
T Consensus       185 ~~~~---------------~~--~---~-------~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        185 MTAG---------------LK--L---P-------GPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             hhhc---------------cC--C---C-------ccccCCHHHHHHHHHHHHhCC
Confidence            2110               00  0   0       122456899999999998864

>PRK06197 short chain dehydrogenase; Provisional

Probab=98.98  E-value=9.1e-09  Score=86.24  Aligned_cols=131  Identities=19%  Similarity=0.164  Sum_probs=87.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC----CCCccccchhHHHHH----HHHHHHHHhcCCCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS----SDDPETDMIKPAIQG----VVNVLKACTKTKTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~   79 (293)
                      .++.++.+|++|.+++.++++       ++|+|||+||.....    ..... ..+.+|+.+    +..++..+++.+ .
T Consensus        67 ~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~ll~~l~~~~-~  144 (306)
T PRK06197         67 ADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFE-LQFGTNHLGHFALTGLLLDRLLPVP-G  144 (306)
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcc-hhhhhhhHHHHHHHHHHHHHHhhCC-C
Confidence            368899999999998877654       589999999975321    12223 678899999    556666666665 5


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEE--EEccCCc
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLI--TVIPSLM  154 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~--ilR~~~v  154 (293)
                      .+||++||........     ..+++..+.      .+..+...|+.+|...+.+.+.++.+.   +++++  .+.|+.|
T Consensus       145 ~~iV~vSS~~~~~~~~-----~~~~~~~~~------~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v  213 (306)
T PRK06197        145 SRVVTVSSGGHRIRAA-----IHFDDLQWE------RRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVS  213 (306)
T ss_pred             CEEEEECCHHHhccCC-----CCccccCcc------cCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcc
Confidence            7999999986322111     111111100      023455689999999999999887764   55554  4579887


Q ss_pred             cCCC
Q 035985          155 SGPS  158 (293)
Q Consensus       155 ~G~~  158 (293)
                      ..+.
T Consensus       214 ~T~~  217 (306)
T PRK06197        214 NTEL  217 (306)
T ss_pred             cCcc
Confidence            6553

>PRK06949 short chain dehydrogenase; Provisional

Probab=98.98  E-value=1.3e-08  Score=83.06  Aligned_cols=164  Identities=20%  Similarity=0.211  Sum_probs=108.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++.+|+++++++.++++       .+|+|||+|+.....      ..++. .++..|+.++..+++++..    ..
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~  136 (258)
T PRK06949         58 GAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFD-FVFDTNTRGAFFVAQEVAKRMIARA  136 (258)
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHhhcchhhHHHHHHHHHHHHhcC
Confidence            368899999999988887765       589999999964321      11223 6688899999888877642    11


Q ss_pred             -------CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEE
Q 035985           78 -------TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLI  147 (293)
Q Consensus        78 -------~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~  147 (293)
                             ...++|++||.....                        +..+...|+.+|...+.+++.++.+   .+++++
T Consensus       137 ~~~~~~~~~g~iv~~sS~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~  192 (258)
T PRK06949        137 KGAGNTKPGGRIINIASVAGLR------------------------VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVN  192 (258)
T ss_pred             CcCCCCCCCeEEEEECcccccC------------------------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEE
Confidence                   025899999975321                        1112358999999999999988765   389999


Q ss_pred             EEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE
Q 035985          148 TVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY  219 (293)
Q Consensus       148 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y  219 (293)
                      +++|+.++++.......   ......+.+.   ++          ...+...+|+++++..++....  ..|.+
T Consensus       193 ~v~pG~v~t~~~~~~~~---~~~~~~~~~~---~~----------~~~~~~p~~~~~~~~~l~~~~~~~~~G~~  250 (258)
T PRK06949        193 AICPGYIDTEINHHHWE---TEQGQKLVSM---LP----------RKRVGKPEDLDGLLLLLAADESQFINGAI  250 (258)
T ss_pred             EEeeCCCcCCcchhccC---hHHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHhChhhcCCCCcE
Confidence            99999999875432110   0111111110   11          1234558999999999887533  34544

>PRK07326 short chain dehydrogenase; Provisional

Probab=98.98  E-value=7.9e-09  Score=83.26  Aligned_cols=149  Identities=19%  Similarity=0.143  Sum_probs=103.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-----CCccccchhHHHHHHHHHHHHHhcC---CCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-----DDPETDMIKPAIQGVVNVLKACTKT---KTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~   79 (293)
                      .++.++++|+.|.+++.++++       ++|+|||+++......     .+.....++.|+.++..+++++.+.   + .
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~  132 (237)
T PRK07326         54 GNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-G  132 (237)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-C
Confidence            468899999999988877665       6899999998754211     0111256888999999888887642   3 5


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      +++|++||.....+                        ......|+.+|...+.+.+.++.+   .|++++++||+.+..
T Consensus       133 ~~iv~~ss~~~~~~------------------------~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t  188 (237)
T PRK07326        133 GYIINISSLAGTNF------------------------FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVAT  188 (237)
T ss_pred             eEEEEECChhhccC------------------------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccC
Confidence            68999998753211                        112347999999999888887543   489999999998866


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      +......            ..       .       ....+..+|+++.++.++..+.
T Consensus       189 ~~~~~~~------------~~-------~-------~~~~~~~~d~a~~~~~~l~~~~  220 (237)
T PRK07326        189 HFNGHTP------------SE-------K-------DAWKIQPEDIAQLVLDLLKMPP  220 (237)
T ss_pred             ccccccc------------ch-------h-------hhccCCHHHHHHHHHHHHhCCc
Confidence            5321100            00       0       0113568999999999998764

>TIGR02415 23BDH acetoin reductases

Probab=98.97  E-value=1.2e-08  Score=83.02  Aligned_cols=178  Identities=19%  Similarity=0.216  Sum_probs=108.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++.+|++|++++.+++.       .+|+|||+|+.....      ..+.. ..++.|+.++..+++++.    +.+
T Consensus        49 ~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~  127 (254)
T TIGR02415        49 GKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELK-KVYNVNVKGVLFGIQAAARQFKKQG  127 (254)
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHH-HHHhhhhHHHHHHHHHHHHHHHhCC
Confidence            358889999999998877654       579999999875321      11122 568899998887766554    333


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      ...++|++||....++.+                        ....|+.+|...+.+++.++.+.   ++.+++++|+.+
T Consensus       128 ~~~~iv~~sS~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i  183 (254)
T TIGR02415       128 HGGKIINAASIAGHEGNP------------------------ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIV  183 (254)
T ss_pred             CCeEEEEecchhhcCCCC------------------------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcc
Confidence            236899999976444322                        23479999999999998887664   799999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CCcE-EEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SGRY-ICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~~y-~~~~  223 (293)
                      ..+....    ....... ..+..... ........-....+...+|+++++..++.....  .|.+ .++|
T Consensus       184 ~t~~~~~----~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  249 (254)
T TIGR02415       184 KTPMWEE----IDEETSE-IAGKPIGE-GFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDG  249 (254)
T ss_pred             cChhhhh----hhhhhhh-cccCchHH-HHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecC
Confidence            5543111    0000000 00000000 000000000012367889999999999987543  3545 4443

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=98.96  E-value=1.6e-08  Score=81.53  Aligned_cols=155  Identities=19%  Similarity=0.203  Sum_probs=105.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh-----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT-----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~-----~~   76 (293)
                      .++.++.+|++|.+++.++++       .+|++||+|+.....      ..++. .+++.|+.++.++++++.     +.
T Consensus        48 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  126 (239)
T TIGR01831        48 GNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWD-IVIHTNLDGFYNVIHPCTMPMIRAR  126 (239)
T ss_pred             CeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhhc
Confidence            468899999999998877654       479999999865321      11223 678899999999988752     23


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..+||++||...+++.+                        ....|+.+|...+.+.+.++.++   |++++.++|+.
T Consensus       127 ~-~~~iv~vsS~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~  181 (239)
T TIGR01831       127 Q-GGRIITLASVSGVMGNR------------------------GQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGL  181 (239)
T ss_pred             C-CeEEEEEcchhhccCCC------------------------CCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEcc
Confidence            3 46899999976554322                        22479999999988888876653   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +.++....    ......... ..   ++          ..-+...+|++++++.++...
T Consensus       182 v~t~~~~~----~~~~~~~~~-~~---~~----------~~~~~~~~~va~~~~~l~~~~  223 (239)
T TIGR01831       182 IDTEMLAE----VEHDLDEAL-KT---VP----------MNRMGQPAEVASLAGFLMSDG  223 (239)
T ss_pred             Cccccchh----hhHHHHHHH-hc---CC----------CCCCCCHHHHHHHHHHHcCch
Confidence            87664321    111111111 10   11          112456899999999998754

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08643 acetoin reductase; Validated

Probab=98.95  E-value=5e-09  Score=85.48  Aligned_cols=120  Identities=18%  Similarity=0.208  Sum_probs=86.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-CC----ccccchhHHHHHHHHHHHHHhc----CCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-DD----PETDMIKPAIQGVVNVLKACTK----TKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-~~----~~~~~~~~n~~~~~~l~~~~~~----~~~   78 (293)
                      .++.++++|+++++.+.++++       ++|+|||+||...... .+    ..+..++.|+.++..+++++..    .+.
T Consensus        51 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  130 (256)
T PRK08643         51 GKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH  130 (256)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence            367889999999998877664       5899999998753211 11    1125678899998877766643    221


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..++|++||....++.+                        ....|+.+|...+.+++.++.+   .|++++.++|+.+.
T Consensus       131 ~~~iv~~sS~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~  186 (256)
T PRK08643        131 GGKIINATSQAGVVGNP------------------------ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVK  186 (256)
T ss_pred             CCEEEEECccccccCCC------------------------CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCc
Confidence            35899999976443221                        2347999999999999888764   48999999999887


Q ss_pred             CCC
Q 035985          156 GPS  158 (293)
Q Consensus       156 G~~  158 (293)
                      ++.
T Consensus       187 t~~  189 (256)
T PRK08643        187 TPM  189 (256)
T ss_pred             Chh
Confidence            753

>PRK07109 short chain dehydrogenase; Provisional

Probab=98.95  E-value=1.9e-08  Score=85.21  Aligned_cols=154  Identities=21%  Similarity=0.207  Sum_probs=101.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--C-C--ccccchhHHHHHHHHH----HHHHhcCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--D-D--PETDMIKPAIQGVVNV----LKACTKTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~-~--~~~~~~~~n~~~~~~l----~~~~~~~~~   78 (293)
                      .++.++.+|++|++++.++++       .+|++||+|+......  . .  ..+..++.|+.+..++    +..+++.+ 
T Consensus        57 ~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-  135 (334)
T PRK07109         57 GEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-  135 (334)
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            368889999999998887754       6899999998643211  0 1  1125677776666554    44445555 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-----CCceEEEEccCC
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-----NNIDLITVIPSL  153 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-----~~~~~~ilR~~~  153 (293)
                      ..+||++||...+.+.                        .....|+.+|...+.+.+.++.+     .++.+++++|+.
T Consensus       136 ~g~iV~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~  191 (334)
T PRK07109        136 RGAIIQVGSALAYRSI------------------------PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPA  191 (334)
T ss_pred             CcEEEEeCChhhccCC------------------------CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCC
Confidence            5789999998643211                        12357999999999888877654     269999999998


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +-.+...        .....+ +..      .     .....+...+|+|++++.++.++
T Consensus       192 v~T~~~~--------~~~~~~-~~~------~-----~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        192 VNTPQFD--------WARSRL-PVE------P-----QPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             ccCchhh--------hhhhhc-ccc------c-----cCCCCCCCHHHHHHHHHHHHhCC
Confidence            8655311        111110 000      0     00234567999999999999875

>PRK07063 short chain dehydrogenase; Provisional

Probab=98.95  E-value=1.8e-08  Score=82.43  Aligned_cols=117  Identities=20%  Similarity=0.229  Sum_probs=87.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++++|++|++++.++++       .+|++||+||.....      ..+.. ..++.|+.++..+++++.    +.+
T Consensus        58 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~  136 (260)
T PRK07063         58 ARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWR-RCFAVDLDGAWNGCRAVLPGMVERG  136 (260)
T ss_pred             ceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHH-HHHHhhhHHHHHHHHHHHHHHHhhC
Confidence            458889999999998887765       689999999964311      11222 668889999988888765    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..++|++||.....+.                        .....|+.+|...+.+++.++.+.   |+++..++|+.+
T Consensus       137 -~g~iv~isS~~~~~~~------------------------~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v  191 (260)
T PRK07063        137 -RGSIVNIASTHAFKII------------------------PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYI  191 (260)
T ss_pred             -CeEEEEECChhhccCC------------------------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCc
Confidence             4689999997532211                        123479999999999999988764   799999999988


Q ss_pred             cCC
Q 035985          155 SGP  157 (293)
Q Consensus       155 ~G~  157 (293)
                      -.+
T Consensus       192 ~t~  194 (260)
T PRK07063        192 ETQ  194 (260)
T ss_pred             cCh
Confidence            654

>PRK08589 short chain dehydrogenase; Validated

Probab=98.94  E-value=1.7e-08  Score=83.18  Aligned_cols=118  Identities=23%  Similarity=0.265  Sum_probs=85.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC--CC-CCc---cccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF--SS-DDP---ETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~--~~-~~~---~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++.+|+++++++.++++       .+|++||+||....  .. ..+   .+..++.|+.++..+++++.    +.+
T Consensus        54 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  133 (272)
T PRK08589         54 GKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG  133 (272)
T ss_pred             CeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            358899999999988876654       48999999987531  11 111   12566788888877766654    333


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                        .++|++||.....+.                        .....|+.+|...+.+++.++.+.   |++++.+.|+.|
T Consensus       134 --g~iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v  187 (272)
T PRK08589        134 --GSIINTSSFSGQAAD------------------------LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTI  187 (272)
T ss_pred             --CEEEEeCchhhcCCC------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcc
Confidence              589999997633211                        123479999999999999987654   799999999998


Q ss_pred             cCCC
Q 035985          155 SGPS  158 (293)
Q Consensus       155 ~G~~  158 (293)
                      ..+.
T Consensus       188 ~T~~  191 (272)
T PRK08589        188 ETPL  191 (272)
T ss_pred             cCch
Confidence            7653

>PRK12742 oxidoreductase; Provisional

Probab=98.94  E-value=2.5e-08  Score=80.34  Aligned_cols=156  Identities=18%  Similarity=0.179  Sum_probs=103.8

Q ss_pred             CeEEEecCCCCCcchhhhhc---CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC-CCccEEEEe
Q 035985           16 ELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT-KTVKRVILT   85 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~   85 (293)
                      ++.++.+|++|.+.+.++++   .+|++||+||.....      ..+.. ..++.|+.++..++..+... ....++|++
T Consensus        52 ~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i  130 (237)
T PRK12742         52 GATAVQTDSADRDAVIDVVRKSGALDILVVNAGIAVFGDALELDADDID-RLFKINIHAPYHASVEAARQMPEGGRIIII  130 (237)
T ss_pred             CCeEEecCCCCHHHHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHH-HHHhHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence            46788899999888777664   489999999875311      11223 67889999998887665543 214689999


Q ss_pred             cccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCCCCC
Q 035985           86 SSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSLTPD  162 (293)
Q Consensus        86 SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~  162 (293)
                      ||.....        .               +..+...|+.+|...|.+++.++.+.   ++++++++|+.+..+.....
T Consensus       131 sS~~~~~--------~---------------~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~  187 (237)
T PRK12742        131 GSVNGDR--------M---------------PVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN  187 (237)
T ss_pred             ecccccc--------C---------------CCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc
Confidence            9964211        0               11234589999999999999887653   79999999998876542211


Q ss_pred             CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          163 IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                          .. ....+...   ..          ..-+...+|+++++..++...
T Consensus       188 ----~~-~~~~~~~~---~~----------~~~~~~p~~~a~~~~~l~s~~  220 (237)
T PRK12742        188 ----GP-MKDMMHSF---MA----------IKRHGRPEEVAGMVAWLAGPE  220 (237)
T ss_pred             ----cH-HHHHHHhc---CC----------CCCCCCHHHHHHHHHHHcCcc
Confidence                01 11111111   00          112467899999999888754

>PRK07677 short chain dehydrogenase; Provisional

Probab=98.94  E-value=2.9e-08  Score=80.83  Aligned_cols=160  Identities=16%  Similarity=0.117  Sum_probs=103.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++++|++|++++.++++       .+|+|||+||.....      ..+.. .+++.|+.++.++++++.+    .+
T Consensus        50 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  128 (252)
T PRK07677         50 GQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWN-SVIDIVLNGTFYCSQAVGKYWIEKG  128 (252)
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHH-HHHhHhhHHHHHHHHHHHHHHHhcC
Confidence            468899999999988877653       579999999854211      01122 6789999999999988843    22


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh----CCceEEEEccCC
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE----NNIDLITVIPSL  153 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~----~~~~~~ilR~~~  153 (293)
                      ...++|++||.....+                        ......|+.+|...+.+++.++.+    +|+++..++|+.
T Consensus       129 ~~g~ii~isS~~~~~~------------------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~  184 (252)
T PRK07677        129 IKGNIINMVATYAWDA------------------------GPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGP  184 (252)
T ss_pred             CCEEEEEEcChhhccC------------------------CCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecc
Confidence            1358999998742110                        011247999999999999987665    379999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +.++........ .....+.+.... .            ..-+...+|+++++..++...
T Consensus       185 v~~~~~~~~~~~-~~~~~~~~~~~~-~------------~~~~~~~~~va~~~~~l~~~~  230 (252)
T PRK07677        185 IERTGGADKLWE-SEEAAKRTIQSV-P------------LGRLGTPEEIAGLAYFLLSDE  230 (252)
T ss_pred             cccccccccccC-CHHHHHHHhccC-C------------CCCCCCHHHHHHHHHHHcCcc
Confidence            875432111000 011111111111 0            112567899999988887653

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=98.94  E-value=2.4e-08  Score=81.33  Aligned_cols=159  Identities=19%  Similarity=0.192  Sum_probs=105.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++..+++|++|.+++.++++       ++|++||+||.....      ..+.. ..+++|+.++..+++++...    +
T Consensus        57 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~  135 (253)
T PRK08993         57 RRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWD-DVMNLNIKSVFFMSQAAAKHFIAQG  135 (253)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHH-HHHhhhhHHHHHHHHHHHHHHHhCC
Confidence            357889999999988877764       589999999975321      11233 77889999999888876532    2


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                      .-.++|++||...+.+..                        ....|+.+|...+.+++.++.+   .|+++..++|+.+
T Consensus       136 ~~g~iv~isS~~~~~~~~------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v  191 (253)
T PRK08993        136 NGGKIINIASMLSFQGGI------------------------RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYM  191 (253)
T ss_pred             CCeEEEEECchhhccCCC------------------------CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcc
Confidence            125899999976332111                        1237999999999999988766   4899999999998


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      -.+.... .... ......... .  ++.          .-+.-.+|+++.++.++...
T Consensus       192 ~T~~~~~-~~~~-~~~~~~~~~-~--~p~----------~r~~~p~eva~~~~~l~s~~  235 (253)
T PRK08993        192 ATNNTQQ-LRAD-EQRSAEILD-R--IPA----------GRWGLPSDLMGPVVFLASSA  235 (253)
T ss_pred             cCcchhh-hccc-hHHHHHHHh-c--CCC----------CCCcCHHHHHHHHHHHhCcc
Confidence            6653211 0000 001111111 1  110          12556899999999998754

>PRK06172 short chain dehydrogenase; Provisional

Probab=98.93  E-value=2e-08  Score=81.80  Aligned_cols=169  Identities=21%  Similarity=0.201  Sum_probs=109.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .++..+.+|++|.+++.++++       .+|+|||+|+.....       .++.. ..++.|+.+...+++++.    +.
T Consensus        56 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~  134 (253)
T PRK06172         56 GEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFD-AIMGVNVKGVWLCMKYQIPLMLAQ  134 (253)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhc
Confidence            468899999999988877765       469999999864211       11222 567899999877766443    34


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..++|++||...+.+.                        .....|+.+|...+.+++.++.++   ++++.++.|+.
T Consensus       135 ~-~~~ii~~sS~~~~~~~------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~  189 (253)
T PRK06172        135 G-GGAIVNTASVAGLGAA------------------------PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAV  189 (253)
T ss_pred             C-CcEEEEECchhhccCC------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCC
Confidence            4 5789999997643321                        123589999999999999988765   79999999998


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE-EEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY-ICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y-~~~~  223 (293)
                      +-.+........ .............             ..-+...+|+++.++.++....  ..|.+ .++|
T Consensus       190 v~t~~~~~~~~~-~~~~~~~~~~~~~-------------~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dg  248 (253)
T PRK06172        190 IDTDMFRRAYEA-DPRKAEFAAAMHP-------------VGRIGKVEEVASAVLYLCSDGASFTTGHALMVDG  248 (253)
T ss_pred             ccChhhhhhccc-ChHHHHHHhccCC-------------CCCccCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence            865532211000 0111111111110             1224579999999999887542  34544 4444

>PRK06139 short chain dehydrogenase; Provisional

Probab=98.93  E-value=2.7e-08  Score=84.01  Aligned_cols=155  Identities=19%  Similarity=0.229  Sum_probs=105.2

Q ss_pred             CCeEEEecCCCCCcchhhhh-------cCCCEEEEecccCCCCC--CCc---cccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPI-------SRSDIVFHVATPVNFSS--DDP---ETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~~~--~~~---~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++.++.+|++|++++.+++       ..+|++||+||......  ..+   .+..++.|+.++.++++++.    +.+ 
T Consensus        56 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-  134 (330)
T PRK06139         56 AEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-  134 (330)
T ss_pred             CcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-
Confidence            35778899999999888776       36899999998653211  111   12578899999988877663    344 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh----CCceEEEEccCCc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE----NNIDLITVIPSLM  154 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~----~~~~~~ilR~~~v  154 (293)
                      ..++|++||...+.+.+                        ....|+.+|...+.+.+.++.+    .++.++.+.|+.+
T Consensus       135 ~g~iV~isS~~~~~~~p------------------------~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v  190 (330)
T PRK06139        135 HGIFINMISLGGFAAQP------------------------YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFM  190 (330)
T ss_pred             CCEEEEEcChhhcCCCC------------------------CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCc
Confidence            46899999875332111                        2347999999988888777654    2799999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      ..+......        . ..+...           .....+...+|+|++++.++.++.
T Consensus       191 ~T~~~~~~~--------~-~~~~~~-----------~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        191 DTPGFRHGA--------N-YTGRRL-----------TPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             cCccccccc--------c-cccccc-----------cCCCCCCCHHHHHHHHHHHHhCCC
Confidence            877532210        0 001000           012346789999999999998764

>PRK07478 short chain dehydrogenase; Provisional

Probab=98.92  E-value=5e-08  Score=79.51  Aligned_cols=159  Identities=21%  Similarity=0.198  Sum_probs=103.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-C------CCccccchhHHHHHHHHHHHH----HhcC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-S------DDPETDMIKPAIQGVVNVLKA----CTKT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-~------~~~~~~~~~~n~~~~~~l~~~----~~~~   76 (293)
                      .++.++.+|+++++++.++++       .+|++||+||..... .      ++.. ..++.|+.+...++++    .++.
T Consensus        55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~-~~~~~N~~~~~~~~~~~~~~l~~~  133 (254)
T PRK07478         55 GEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWR-ETLATNLTSAFLGAKHQIPAMLAR  133 (254)
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhc
Confidence            368889999999998877765       689999999974311 0      1122 6788999877766554    3444


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..++|++||...+. .                      .......|+.+|...+.+++.++.+.   |+++++++|+.
T Consensus       134 ~-~~~iv~~sS~~~~~-~----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~  189 (254)
T PRK07478        134 G-GGSLIFTSTFVGHT-A----------------------GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGG  189 (254)
T ss_pred             C-CceEEEEechHhhc-c----------------------CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCc
Confidence            4 57899999975321 0                      11123589999999999999887764   79999999998


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +-.+...... .. ......+....      .       ...+...+|+++.++.++...
T Consensus       190 v~t~~~~~~~-~~-~~~~~~~~~~~------~-------~~~~~~~~~va~~~~~l~s~~  234 (254)
T PRK07478        190 TDTPMGRAMG-DT-PEALAFVAGLH------A-------LKRMAQPEEIAQAALFLASDA  234 (254)
T ss_pred             ccCccccccc-CC-HHHHHHHHhcC------C-------CCCCcCHHHHHHHHHHHcCch
Confidence            8655221110 00 11111111100      0       122456999999999988754

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.92  E-value=1.4e-08  Score=77.88  Aligned_cols=178  Identities=19%  Similarity=0.120  Sum_probs=121.2

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ..++++++|.....-+...+.++..++-+++...    +.. .+..+|-+...+..+++.+.+ +++|+|+|-.. +. -
T Consensus        96 ~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfg----n~~-~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d-~~-~  167 (283)
T KOG4288|consen   96 TYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFG----NII-LMDRINGTANINAVKAAAKAG-VPRFVYISAHD-FG-L  167 (283)
T ss_pred             cccchhhccccccCcchhhhcCCcccHHHhcCcc----chH-HHHHhccHhhHHHHHHHHHcC-CceEEEEEhhh-cC-C
Confidence            4789999999888778888888888888887543    222 677788888889999999999 99999998643 21 1


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccH-------
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSV-------  167 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~-------  167 (293)
                      +                     + .-...|-.+|.++|.-+...   +..+-+++||+.+||...-......+       
T Consensus       168 ~---------------------~-~i~rGY~~gKR~AE~Ell~~---~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl  222 (283)
T KOG4288|consen  168 P---------------------P-LIPRGYIEGKREAEAELLKK---FRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPL  222 (283)
T ss_pred             C---------------------C-ccchhhhccchHHHHHHHHh---cCCCceeeccceeecccccCcccccHHhhhhhH
Confidence            1                     1 11237999999999877553   36788999999999984433322211       


Q ss_pred             HHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHH
Q 035985          168 ALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNK  237 (293)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~  237 (293)
                      .+..+........++..+     +-..+-+.++++|.+.+.++.++.-.|+       +++.|+.+...+
T Consensus       223 ~~~~~~a~k~~~kLp~lg-----~l~~ppvnve~VA~aal~ai~dp~f~Gv-------v~i~eI~~~a~k  280 (283)
T KOG4288|consen  223 EMVLKFALKPLNKLPLLG-----PLLAPPVNVESVALAALKAIEDPDFKGV-------VTIEEIKKAAHK  280 (283)
T ss_pred             HHHHHhhhchhhcCcccc-----cccCCCcCHHHHHHHHHHhccCCCcCce-------eeHHHHHHHHHH
Confidence            112222221111233322     3357789999999999999998865454       455666554443

>PRK08226 short chain dehydrogenase; Provisional

Probab=98.91  E-value=2.7e-08  Score=81.45  Aligned_cols=162  Identities=25%  Similarity=0.243  Sum_probs=105.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCcc---ccchhHHHHHHHHHHHHHhc----CCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDPE---TDMIKPAIQGVVNVLKACTK----TKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~~---~~~~~~n~~~~~~l~~~~~~----~~~   78 (293)
                      .++.++++|+++++++.++++       .+|+|||+|+......  ..+.   +..++.|+.++..+++++..    .+ 
T Consensus        54 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-  132 (263)
T PRK08226         54 HRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-  132 (263)
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-
Confidence            367889999999998877764       5799999999753211  1111   24688899999998887653    33 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..++|++||......                       +......|+.+|...+.+++.++.+.   +++++.++|+.+.
T Consensus       133 ~~~iv~isS~~~~~~-----------------------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~  189 (263)
T PRK08226        133 DGRIVMMSSVTGDMV-----------------------ADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVR  189 (263)
T ss_pred             CcEEEEECcHHhccc-----------------------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccc
Confidence            568999998642110                       01123479999999999999888654   7999999999998


Q ss_pred             CCCCCCC----CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPD----IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ++.....    .+.........+....   +          ...+...+|+++++..++...
T Consensus       190 t~~~~~~~~~~~~~~~~~~~~~~~~~~---p----------~~~~~~~~~va~~~~~l~~~~  238 (263)
T PRK08226        190 TPMAESIARQSNPEDPESVLTEMAKAI---P----------LRRLADPLEVGELAAFLASDE  238 (263)
T ss_pred             CHHHHhhhhhccCCCcHHHHHHHhccC---C----------CCCCCCHHHHHHHHHHHcCch
Confidence            7632110    0001111111111111   0          122467899999988887643

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=98.90  E-value=6.2e-08  Score=79.30  Aligned_cols=159  Identities=19%  Similarity=0.150  Sum_probs=102.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHH----HHhcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLK----ACTKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~----~~~~~~   77 (293)
                      .++.++.+|++|.+++.++++       .+|++||+|+......      ... +..++.|+.+...+++    .+.+.+
T Consensus        57 ~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~~~~~~l~~~~~~~  135 (261)
T PRK08936         57 GEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDW-NKVINTNLTGAFLGSREAIKYFVEHD  135 (261)
T ss_pred             CeEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            357789999999998777654       5899999999753211      112 2567889887765554    444443


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      .-.++|++||.....                        +..+...|+.+|...+.+.+.++.+.   ++++++++|+.+
T Consensus       136 ~~g~iv~~sS~~~~~------------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v  191 (261)
T PRK08936        136 IKGNIINMSSVHEQI------------------------PWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAI  191 (261)
T ss_pred             CCcEEEEEccccccC------------------------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcC
Confidence            236899999964221                        11233589999998888888776543   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      -.+........  ......+....   +          ..-+...+|+++.+..++...
T Consensus       192 ~t~~~~~~~~~--~~~~~~~~~~~---~----------~~~~~~~~~va~~~~~l~s~~  235 (261)
T PRK08936        192 NTPINAEKFAD--PKQRADVESMI---P----------MGYIGKPEEIAAVAAWLASSE  235 (261)
T ss_pred             CCCccccccCC--HHHHHHHHhcC---C----------CCCCcCHHHHHHHHHHHcCcc
Confidence            87743221111  11111111111   1          122556899999999988754

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=98.90  E-value=3.5e-08  Score=80.28  Aligned_cols=159  Identities=19%  Similarity=0.240  Sum_probs=104.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++.+|++|.+++.++++       .+|++||+||.....      ..+.. ..++.|+.++..+++++..    .+
T Consensus        55 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~-~~~~vN~~~~~~l~~~~~~~~~~~~  133 (251)
T PRK12481         55 RKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWD-DVININQKTVFFLSQAVAKQFVKQG  133 (251)
T ss_pred             CeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHH-HHheeCcHHHHHHHHHHHHHHHHcC
Confidence            468889999999998887764       589999999975321      11223 6788999998888776643    22


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                      .-.++|++||...+.+..                        ....|+.+|...+.+++.++.+   +|+++..++|+.+
T Consensus       134 ~~g~ii~isS~~~~~~~~------------------------~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v  189 (251)
T PRK12481        134 NGGKIINIASMLSFQGGI------------------------RVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYM  189 (251)
T ss_pred             CCCEEEEeCChhhcCCCC------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCC
Confidence            125899999976432211                        1237999999999999988774   4899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      -.+.... .... ......+...   ++          ...+...+|+++++..++...
T Consensus       190 ~t~~~~~-~~~~-~~~~~~~~~~---~p----------~~~~~~peeva~~~~~L~s~~  233 (251)
T PRK12481        190 ATDNTAA-LRAD-TARNEAILER---IP----------ASRWGTPDDLAGPAIFLSSSA  233 (251)
T ss_pred             ccCchhh-cccC-hHHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHhCcc
Confidence            6542111 0000 0011111110   11          112567899999999988753

>PRK05872 short chain dehydrogenase; Provisional

Probab=98.89  E-value=2.5e-08  Score=83.19  Aligned_cols=159  Identities=20%  Similarity=0.142  Sum_probs=104.4

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC---CCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT---KTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~   79 (293)
                      .+..+.+|++|.+++.++++       .+|+|||+||.....      .++. +..+++|+.++.++++++...   . .
T Consensus        58 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~-~~~~~vn~~g~~~l~~~~~~~~~~~-~  135 (296)
T PRK05872         58 RVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAF-RRVIDVNLLGVFHTVRATLPALIER-R  135 (296)
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHc-C
Confidence            46667799999988877653       589999999975321      1112 267889999999998887532   2 3


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      .+||++||...+.+.                        .....|+.+|...+.+++.++.+   .|+.++++.|+.+..
T Consensus       136 g~iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T  191 (296)
T PRK05872        136 GYVLQVSSLAAFAAA------------------------PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDT  191 (296)
T ss_pred             CEEEEEeCHhhcCCC------------------------CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccc
Confidence            589999997643221                        12348999999999999887654   489999999998866


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +........ ...+ ..+.+.. ..+          ...++..+|++++++.++...
T Consensus       192 ~~~~~~~~~-~~~~-~~~~~~~-~~p----------~~~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        192 DLVRDADAD-LPAF-RELRARL-PWP----------LRRTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             hhhhhcccc-chhH-HHHHhhC-CCc----------ccCCCCHHHHHHHHHHHHhcC
Confidence            532211100 0111 1111110 000          123567999999999998764

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=98.89  E-value=4.6e-08  Score=90.22  Aligned_cols=116  Identities=22%  Similarity=0.200  Sum_probs=83.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCc---cccchhHHHHHHHHHHHHH----hcCCCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDP---ETDMIKPAIQGVVNVLKAC----TKTKTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~---~~~~~~~n~~~~~~l~~~~----~~~~~~   79 (293)
                      .+..+++|++|++++.++++       ++|+|||+||......  ...   ....++.|+.+...+++.+    ++.+..
T Consensus       466 ~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~  545 (676)
T TIGR02632       466 RAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLG  545 (676)
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            57789999999998887775       6899999999753211  111   1255677888776665444    333312


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      .+||++||...+++.+                        ....|+.+|...+.+++.++.+.   |+++..++|+.|+
T Consensus       546 g~IV~iSS~~a~~~~~------------------------~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~  600 (676)
T TIGR02632       546 GNIVFIASKNAVYAGK------------------------NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL  600 (676)
T ss_pred             CEEEEEeChhhcCCCC------------------------CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence            5899999976444321                        23589999999999999987763   7999999999887

>PRK05867 short chain dehydrogenase; Provisional

Probab=98.89  E-value=6.3e-08  Score=78.87  Aligned_cols=159  Identities=18%  Similarity=0.187  Sum_probs=104.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--C---CccccchhHHHHHHHHHHHHHhc----CCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--D---DPETDMIKPAIQGVVNVLKACTK----TKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~---~~~~~~~~~n~~~~~~l~~~~~~----~~~   78 (293)
                      .++..+++|++|++++.++++       .+|++||+||......  .   +..+..++.|+.++..+++++..    .++
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  137 (253)
T PRK05867         58 GKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQ  137 (253)
T ss_pred             CeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC
Confidence            367889999999998877664       6899999999753211  0   11125678999999888887742    221


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      -.++|++||.......                      .......|+.+|...+.+++.++.+.   |+++..++|+.+-
T Consensus       138 ~g~iv~~sS~~~~~~~----------------------~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~  195 (253)
T PRK05867        138 GGVIINTASMSGHIIN----------------------VPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYIL  195 (253)
T ss_pred             CcEEEEECcHHhcCCC----------------------CCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCC
Confidence            2479999886421100                      00122479999999999999987654   8999999999986


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+....    . ......+...   .+          ..-+...+|+|++++.++...
T Consensus       196 t~~~~~----~-~~~~~~~~~~---~~----------~~r~~~p~~va~~~~~L~s~~  235 (253)
T PRK05867        196 TELVEP----Y-TEYQPLWEPK---IP----------LGRLGRPEELAGLYLYLASEA  235 (253)
T ss_pred             Cccccc----c-hHHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHcCcc
Confidence            553211    1 1111111111   01          112567899999999988754

>PRK07576 short chain dehydrogenase; Provisional

Probab=98.89  E-value=2.4e-08  Score=81.90  Aligned_cols=170  Identities=19%  Similarity=0.175  Sum_probs=107.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC--CCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT--KTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~   79 (293)
                      .++.++.+|+++++++.++++       .+|+|||+|+.....      ..+.. ..++.|+.++.++++++...  ++-
T Consensus        58 ~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~g~~~l~~~~~~~l~~~~  136 (264)
T PRK07576         58 PEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFK-TVVDIDLLGTFNVLKAAYPLLRRPG  136 (264)
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhCC
Confidence            357888999999988877664       479999999754211      11122 56779999999999887642  112


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .++|++||.....+                        ......|+.+|...+.+++.++.+.   +++++.++|+.+.+
T Consensus       137 g~iv~iss~~~~~~------------------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~  192 (264)
T PRK07576        137 ASIIQISAPQAFVP------------------------MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAG  192 (264)
T ss_pred             CEEEEECChhhccC------------------------CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccC
Confidence            58999999753221                        1123589999999999999887653   79999999998875


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE-EEec
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY-ICCA  223 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y-~~~~  223 (293)
                      .......... ......+...   ++          ...+...+|++++++.++..+.  ..|.+ .+.|
T Consensus       193 t~~~~~~~~~-~~~~~~~~~~---~~----------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~g  248 (264)
T PRK07576        193 TEGMARLAPS-PELQAAVAQS---VP----------LKRNGTKQDIANAALFLASDMASYITGVVLPVDG  248 (264)
T ss_pred             cHHHhhcccC-HHHHHHHHhc---CC----------CCCCCCHHHHHHHHHHHcChhhcCccCCEEEECC
Confidence            3211100000 0011111110   11          1235678999999999997533  24544 4433

>PRK07832 short chain dehydrogenase; Provisional

Probab=98.86  E-value=1.9e-08  Score=82.80  Aligned_cols=117  Identities=19%  Similarity=0.219  Sum_probs=83.9

Q ss_pred             eEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCCc
Q 035985           17 LKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKTV   79 (293)
Q Consensus        17 v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~   79 (293)
                      +.++.+|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++..+++++.    +.+..
T Consensus        52 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~l~~~~~~  130 (272)
T PRK07832         52 PEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWR-RMVDVNLMGPIHVIETFVPPMVAAGRG  130 (272)
T ss_pred             ceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhCCCC
Confidence            4567899999988776654       4799999998753211      1122 678899999999999864    22224


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      .++|++||.....+.                        .....|+.+|...+.+.+.++.+   .++++++++|+.+.+
T Consensus       131 g~ii~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t  186 (272)
T PRK07832        131 GHLVNVSSAAGLVAL------------------------PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKT  186 (272)
T ss_pred             cEEEEEccccccCCC------------------------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccC
Confidence            689999997532211                        12247999999888887776643   489999999999987


Q ss_pred             CC
Q 035985          157 PS  158 (293)
Q Consensus       157 ~~  158 (293)
                      +.
T Consensus       187 ~~  188 (272)
T PRK07832        187 PL  188 (272)
T ss_pred             cc
Confidence            74

>PRK07578 short chain dehydrogenase; Provisional

Probab=98.86  E-value=3.1e-08  Score=77.63  Aligned_cols=149  Identities=21%  Similarity=0.178  Sum_probs=102.0

Q ss_pred             EEecCCCCCcchhhhhc---CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC--CCccEEEEecc
Q 035985           19 IFRADLTDEASFDAPIS---RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT--KTVKRVILTSS   87 (293)
Q Consensus        19 ~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS   87 (293)
                      .+++|++|+++++++++   ++|+|||+||.....      ..+.. ..++.|+.++.++++++...  + ..+|+++||
T Consensus        35 ~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~iss  112 (199)
T PRK07578         35 DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFN-VGLQSKLMGQVNLVLIGQHYLND-GGSFTLTSG  112 (199)
T ss_pred             ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcc
Confidence            56789999998888776   689999999964321      11122 56778999999999887642  2 357999998


Q ss_pred             cchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh--CCceEEEEccCCccCCCCCCCCCc
Q 035985           88 AAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE--NNIDLITVIPSLMSGPSLTPDIPS  165 (293)
Q Consensus        88 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~  165 (293)
                      .....+                        ......|+.+|...+.+.+.++.+  .|+++..+.|+.+-.+.       
T Consensus       113 ~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~-------  161 (199)
T PRK07578        113 ILSDEP------------------------IPGGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESL-------  161 (199)
T ss_pred             cccCCC------------------------CCCchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCch-------
Confidence            653211                        112348999999999999988775  48999999998773221       


Q ss_pred             cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcE
Q 035985          166 SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRY  219 (293)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y  219 (293)
                        ...     +.  .+   .       ...++..+|+|+.+..+++....+.++
T Consensus       162 --~~~-----~~--~~---~-------~~~~~~~~~~a~~~~~~~~~~~~g~~~  196 (199)
T PRK07578        162 --EKY-----GP--FF---P-------GFEPVPAARVALAYVRSVEGAQTGEVY  196 (199)
T ss_pred             --hhh-----hh--cC---C-------CCCCCCHHHHHHHHHHHhccceeeEEe
Confidence              000     00  01   1       123578999999999998865444344

>PRK07831 short chain dehydrogenase; Provisional

Probab=98.86  E-value=6.2e-08  Score=79.34  Aligned_cols=157  Identities=19%  Similarity=0.162  Sum_probs=104.3

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~   78 (293)
                      ++..+++|+++++.+.++++       .+|+|||+||.....      ..+.. ..+..|+.+...+++++..    .+.
T Consensus        70 ~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~  148 (262)
T PRK07831         70 RVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWS-RVLDVTLTGTFRATRAALRYMRARGH  148 (262)
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence            58889999999988877664       579999999964311      11122 5677899999888877653    221


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      -.++|++||.....                        +..+...|+.+|...+.+++.++.+   +++++..++|+.+.
T Consensus       149 ~g~iv~~ss~~~~~------------------------~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~  204 (262)
T PRK07831        149 GGVIVNNASVLGWR------------------------AQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAM  204 (262)
T ss_pred             CcEEEEeCchhhcC------------------------CCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCcc
Confidence            35788888864221                        1112347999999999999998866   48999999999998


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+......   .......+..... +            .-+...+|++++++.++...
T Consensus       205 t~~~~~~~---~~~~~~~~~~~~~-~------------~r~~~p~~va~~~~~l~s~~  246 (262)
T PRK07831        205 HPFLAKVT---SAELLDELAAREA-F------------GRAAEPWEVANVIAFLASDY  246 (262)
T ss_pred             Cccccccc---CHHHHHHHHhcCC-C------------CCCcCHHHHHHHHHHHcCch
Confidence            77432111   1111122211111 1            12455899999999988754

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.86  E-value=1.4e-07  Score=70.00  Aligned_cols=166  Identities=19%  Similarity=0.176  Sum_probs=115.2

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++++.++.|+.|+.++.+.+.+.|+||..-+...   .+..    .........+++..+..+ +.|++.+++++..+-.
T Consensus        41 ~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~---~~~~----~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id  112 (211)
T COG2910          41 QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGA---SDND----ELHSKSIEALIEALKGAG-VPRLLVVGGAGSLEID  112 (211)
T ss_pred             ccceeecccccChhhhHhhhcCCceEEEeccCCC---CChh----HHHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEc
Confidence            5789999999999999999999999998776532   1121    122333667888888888 8999999988765543


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      ...   ..  .++         +.-|...|...+..+|. +..+.....++||.+-|+..|-|++......         
T Consensus       113 ~g~---rL--vD~---------p~fP~ey~~~A~~~ae~-L~~Lr~~~~l~WTfvSPaa~f~PGerTg~yr---------  168 (211)
T COG2910         113 EGT---RL--VDT---------PDFPAEYKPEALAQAEF-LDSLRAEKSLDWTFVSPAAFFEPGERTGNYR---------  168 (211)
T ss_pred             CCc---ee--ecC---------CCCchhHHHHHHHHHHH-HHHHhhccCcceEEeCcHHhcCCccccCceE---------
Confidence            321   11  111         34455677788888874 4455555579999999999999977654221         


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cE
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RY  219 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y  219 (293)
                      .|+...+....       --++|...|.|-+++.-++++.... +|
T Consensus       169 lggD~ll~n~~-------G~SrIS~aDYAiA~lDe~E~~~h~rqRf  207 (211)
T COG2910         169 LGGDQLLVNAK-------GESRISYADYAIAVLDELEKPQHIRQRF  207 (211)
T ss_pred             eccceEEEcCC-------CceeeeHHHHHHHHHHHHhcccccceee
Confidence            24444443332       3678999999999999999886533 44

>PRK05866 short chain dehydrogenase; Provisional

Probab=98.85  E-value=2.5e-08  Score=82.97  Aligned_cols=147  Identities=16%  Similarity=0.160  Sum_probs=101.9

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--------CCccccchhHHHHHHHHHHHHHh----cC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--------DDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .+.++++|++|.+++.++++       .+|+|||+||......        .+.. ..++.|+.+...+++++.    +.
T Consensus        90 ~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~  168 (293)
T PRK05866         90 DAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVE-RTMVLNYYAPLRLIRGLAPGMLER  168 (293)
T ss_pred             cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            57889999999998887776       6899999998753211        1112 567889999888777653    55


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..++|++||.+.+.+.                       ......|+.+|...+.+++.++.+.   ++++++++|+.
T Consensus       169 ~-~g~iv~isS~~~~~~~-----------------------~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~  224 (293)
T PRK05866        169 G-DGHIINVATWGVLSEA-----------------------SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPL  224 (293)
T ss_pred             C-CcEEEEECChhhcCCC-----------------------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCc
Confidence            5 6799999997522110                       0122479999999999988886654   89999999997


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +-.+....               . .   ...       ....+..+++|+.++.++.+.
T Consensus       225 v~T~~~~~---------------~-~---~~~-------~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        225 VATPMIAP---------------T-K---AYD-------GLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             ccCccccc---------------c-c---ccc-------CCCCCCHHHHHHHHHHHHhcC
Confidence            65442110               0 0   000       122356899999999999864

>PRK06940 short chain dehydrogenase; Provisional

Probab=98.85  E-value=5.4e-08  Score=80.27  Aligned_cols=183  Identities=12%  Similarity=0.112  Sum_probs=106.3

Q ss_pred             CeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcC-CCccEEEEeccc
Q 035985           16 ELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT-KTVKRVILTSSA   88 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~   88 (293)
                      ++.++++|++|++++.++++      .+|++||+||.... ..++. .+++.|+.++.++++++... ..-.++|++||.
T Consensus        50 ~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li~nAG~~~~-~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~  127 (275)
T PRK06940         50 DVSTQEVDVSSRESVKALAATAQTLGPVTGLVHTAGVSPS-QASPE-AILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ  127 (275)
T ss_pred             eEEEEEeecCCHHHHHHHHHHHHhcCCCCEEEECCCcCCc-hhhHH-HHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence            57889999999998877764      58999999997532 23344 88999999999999887643 101346777776


Q ss_pred             chhcccccCC-CCccccCCCCCchh-hh---c-cCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCC
Q 035985           89 AAVSINAQNV-TGLVMDEKNWTDVE-FL---S-SEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSL  159 (293)
Q Consensus        89 ~~~~~~~~~~-~~~~~~E~~~~~~~-~~---~-~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~  159 (293)
                      .......... ....+......... ..   + ....+...|+.+|...+.+.+.++.+.   |+++..+.|+.+-.+..
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~  207 (275)
T PRK06940        128 SGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLA  207 (275)
T ss_pred             ccccCcccchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccc
Confidence            5333210000 00000000000000 00   0 000134579999999999998877653   79999999998876632


Q ss_pred             CCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          160 TPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ..............+....   +          ..-+...+|+|++++.++...
T Consensus       208 ~~~~~~~~~~~~~~~~~~~---p----------~~r~~~peeia~~~~fL~s~~  248 (275)
T PRK06940        208 QDELNGPRGDGYRNMFAKS---P----------AGRPGTPDEIAALAEFLMGPR  248 (275)
T ss_pred             hhhhcCCchHHHHHHhhhC---C----------cccCCCHHHHHHHHHHHcCcc
Confidence            1110000000111111110   0          112567899999999988643

>PRK08278 short chain dehydrogenase; Provisional

Probab=98.84  E-value=1.6e-07  Score=77.41  Aligned_cols=164  Identities=18%  Similarity=0.207  Sum_probs=106.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCc---cccchhHHHHHHHHHHHHHhcC---CCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDP---ETDMIKPAIQGVVNVLKACTKT---KTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~---~~~~~~~n~~~~~~l~~~~~~~---~~~   79 (293)
                      .++.++++|+++++.+.++++       ++|+|||+||......  ..+   .+..++.|+.++.++++++...   .+-
T Consensus        62 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~  141 (273)
T PRK08278         62 GQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSEN  141 (273)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCC
Confidence            368889999999998877765       6899999999753211  111   1257789999999999988632   113


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .++|++||.....+.                      ...+...|+.+|...|.+++.++.+.   +++++.+.|+.+..
T Consensus       142 g~iv~iss~~~~~~~----------------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~  199 (273)
T PRK08278        142 PHILTLSPPLNLDPK----------------------WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIA  199 (273)
T ss_pred             CEEEEECCchhcccc----------------------ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccc
Confidence            578888875311100                      01234689999999999999988765   79999999984322


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcEEEec
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRYICCA  223 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y~~~~  223 (293)
                      ..       .    .....+....            ...+...+|+++.++.++....  ..|.+++.+
T Consensus       200 t~-------~----~~~~~~~~~~------------~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~~~  245 (273)
T PRK08278        200 TA-------A----VRNLLGGDEA------------MRRSRTPEIMADAAYEILSRPAREFTGNFLIDE  245 (273)
T ss_pred             cH-------H----HHhccccccc------------ccccCCHHHHHHHHHHHhcCccccceeEEEecc
Confidence            11       0    0101111100            1234568999999999987643  344454443

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.84  E-value=3.3e-07  Score=75.46  Aligned_cols=177  Identities=19%  Similarity=0.144  Sum_probs=125.8

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++.+|+.++..+..++++.|.++++.+... ...    ...........+..+.+. .+ +++++++|...+    
T Consensus        42 ~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~~~----~~~~~~~~~~~~~a~~a~-~~-~~~~~~~s~~~~----  110 (275)
T COG0702          42 GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-GSD----AFRAVQVTAVVRAAEAAG-AG-VKHGVSLSVLGA----  110 (275)
T ss_pred             CCcEEEEeccCCHhHHHHHhccccEEEEEecccc-ccc----chhHHHHHHHHHHHHHhc-CC-ceEEEEeccCCC----
Confidence            4799999999999999999999999999988654 211    123344444555555555 44 788999887642    


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                                            .......|..+|..+|..+..    .|++++++|++.+|......     +  .....
T Consensus       111 ----------------------~~~~~~~~~~~~~~~e~~l~~----sg~~~t~lr~~~~~~~~~~~-----~--~~~~~  157 (275)
T COG0702         111 ----------------------DAASPSALARAKAAVEAALRS----SGIPYTTLRRAAFYLGAGAA-----F--IEAAE  157 (275)
T ss_pred             ----------------------CCCCccHHHHHHHHHHHHHHh----cCCCeEEEecCeeeeccchh-----H--HHHHH
Confidence                                  111235899999999988844    48999999977776654321     1  22333


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEEe-ccCCCHHHHHHHHHHhCCC
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYICC-AVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~~-~~~~t~~e~~~~i~~~~~~  241 (293)
                      ......+...      .+....+..+|++..+..++..+.. +..|.++ .+..+..++.+.+....++
T Consensus       158 ~~~~~~~~~~------~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr  220 (275)
T COG0702         158 AAGLPVIPRG------IGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIGR  220 (275)
T ss_pred             hhCCceecCC------CCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHHHhCC
Confidence            3333333332      2368899999999999999987754 4578664 4689999999999999885

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=98.82  E-value=5e-08  Score=78.19  Aligned_cols=152  Identities=23%  Similarity=0.239  Sum_probs=106.0

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-----CCCccccchhHHHHHHHHHHHHH----hcCCCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-----SDDPETDMIKPAIQGVVNVLKAC----TKTKTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~   79 (293)
                      .++++.+|+++++++.++.+       .+|++||+||.....     ..+..+++++.|+.+...+..+.    .+.+ -
T Consensus        57 ~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~  135 (265)
T COG0300          57 EVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-A  135 (265)
T ss_pred             eEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence            47889999999998888764       599999999986422     11122378899988876665554    4555 5


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .++|.++|...+.+                        ..-.+.|+.||...-.+.+.+..+.   |+.++.+-|+.+..
T Consensus       136 G~IiNI~S~ag~~p------------------------~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T  191 (265)
T COG0300         136 GHIINIGSAAGLIP------------------------TPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRT  191 (265)
T ss_pred             ceEEEEechhhcCC------------------------CcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccc
Confidence            69999999864332                        1223589999999988877776654   79999999998866


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ......             +... .....       ..-++..+|+|+..+.++...
T Consensus       192 ~f~~~~-------------~~~~-~~~~~-------~~~~~~~~~va~~~~~~l~~~  227 (265)
T COG0300         192 EFFDAK-------------GSDV-YLLSP-------GELVLSPEDVAEAALKALEKG  227 (265)
T ss_pred             cccccc-------------cccc-ccccc-------hhhccCHHHHHHHHHHHHhcC
Confidence            543210             0000 00000       255778999999999999865

>PRK05854 short chain dehydrogenase; Provisional

Probab=98.82  E-value=2.7e-08  Score=83.62  Aligned_cols=130  Identities=16%  Similarity=0.021  Sum_probs=90.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC----CCCccccchhHHHHHHHHHHHHHhc---CCCcc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS----SDDPETDMIKPAIQGVVNVLKACTK---TKTVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~   80 (293)
                      .++.++++|++|.+++.++++       .+|++||+||.....    ..+..+..+.+|+.+...+.+.+..   .+ ..
T Consensus        65 ~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~  143 (313)
T PRK05854         65 AKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RA  143 (313)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CC
Confidence            368899999999998877654       489999999975421    1122236788999998877776652   23 35


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-----CCceEEEEccCCcc
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-----NNIDLITVIPSLMS  155 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-----~~~~~~ilR~~~v~  155 (293)
                      ++|++||....++....   ..++++.         ...+...|+.+|...+.+.+.++++     .++.+..+.|+.+-
T Consensus       144 riv~vsS~~~~~~~~~~---~~~~~~~---------~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~  211 (313)
T PRK05854        144 RVTSQSSIAARRGAINW---DDLNWER---------SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAP  211 (313)
T ss_pred             CeEEEechhhcCCCcCc---ccccccc---------cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceec
Confidence            89999998644432111   1222222         2344568999999999999988753     36999999999886


Q ss_pred             CC
Q 035985          156 GP  157 (293)
Q Consensus       156 G~  157 (293)
                      .+
T Consensus       212 T~  213 (313)
T PRK05854        212 TN  213 (313)
T ss_pred             cC
Confidence            54

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.82  E-value=1.5e-07  Score=76.86  Aligned_cols=154  Identities=16%  Similarity=0.095  Sum_probs=101.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC---CC--ccccchhHHHHHHHHHHHHH----hcCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS---DD--PETDMIKPAIQGVVNVLKAC----TKTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~---~~--~~~~~~~~n~~~~~~l~~~~----~~~~~   78 (293)
                      .++.++++|++|.+++.+++.       .+|+|||+|+......   ..  ..+..++.|+.+...+.+++    ++.+ 
T Consensus        68 ~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-  146 (256)
T PRK12859         68 VKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-  146 (256)
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-
Confidence            357889999999998877764       4799999998653211   11  11256888999888775444    3333 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..+||++||.....                        +..+...|+.+|...+.+++.++.+   .+++++.++|+.+-
T Consensus       147 ~g~iv~isS~~~~~------------------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~  202 (256)
T PRK12859        147 GGRIINMTSGQFQG------------------------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTD  202 (256)
T ss_pred             CeEEEEEcccccCC------------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEcccc
Confidence            46999999975321                        1123458999999999999888765   48999999999875


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+...       ......+...   .+          ...+...+|+++++..++...
T Consensus       203 t~~~~-------~~~~~~~~~~---~~----------~~~~~~~~d~a~~~~~l~s~~  240 (256)
T PRK12859        203 TGWMT-------EEIKQGLLPM---FP----------FGRIGEPKDAARLIKFLASEE  240 (256)
T ss_pred             CCCCC-------HHHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHhCcc
Confidence            54211       1111111110   00          122456899999998887653

>PRK06953 short chain dehydrogenase; Provisional

Probab=98.81  E-value=6.4e-08  Score=77.19  Aligned_cols=120  Identities=18%  Similarity=0.150  Sum_probs=87.0

Q ss_pred             CeEEEecCCCCCcchhhhh---c--CCCEEEEecccCCCC--------CCCccccchhHHHHHHHHHHHHHhcC--CCcc
Q 035985           16 ELKIFRADLTDEASFDAPI---S--RSDIVFHVATPVNFS--------SDDPETDMIKPAIQGVVNVLKACTKT--KTVK   80 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~---~--~~d~Vih~a~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~   80 (293)
                      +++++.+|+++.+.+.+++   .  .+|+|||+++.....        ..++. ..++.|+.++.++++++...  ..-.
T Consensus        45 ~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~g  123 (222)
T PRK06953         45 GAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFD-AVMHTNVLGPMQLLPILLPLVEAAGG  123 (222)
T ss_pred             cceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHH-HHHhhhhhhHHHHHHHHHHhhhccCC
Confidence            4678999999999888764   2  489999999875211        11223 68899999999999888642  1124


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-CceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-NIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~  157 (293)
                      ++|++||....++..                     +..+...|+.+|...+.+++.++.++ +++++.++|+.+..+
T Consensus       124 ~iv~isS~~~~~~~~---------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~  180 (222)
T PRK06953        124 VLAVLSSRMGSIGDA---------------------TGTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTD  180 (222)
T ss_pred             eEEEEcCcccccccc---------------------cCCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence            789998875443321                     11122369999999999999887765 789999999988655

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.81  E-value=8.8e-08  Score=78.33  Aligned_cols=158  Identities=15%  Similarity=0.128  Sum_probs=98.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC------C------CCCccccchhHHHHHHHHHHHHH--
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF------S------SDDPETDMIKPAIQGVVNVLKAC--   73 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~------~------~~~~~~~~~~~n~~~~~~l~~~~--   73 (293)
                      .++.++++|++|++++.++++       .+|++||+|+....      .      ..... ..++.|+.+...+.+.+  
T Consensus        59 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~  137 (260)
T PRK08416         59 IKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLN-NIYTATVNAFVVGAQEAAK  137 (260)
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHH-HHHhhhhHHHHHHHHHHHH
Confidence            368899999999988877664       58999999975321      0      01111 45666776665554443  


Q ss_pred             --hcCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEE
Q 035985           74 --TKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLIT  148 (293)
Q Consensus        74 --~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~i  148 (293)
                        ++.+ ..++|++||......                        ......|+.+|...+.+++.++.++   |+++..
T Consensus       138 ~~~~~~-~g~iv~isS~~~~~~------------------------~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~  192 (260)
T PRK08416        138 RMEKVG-GGSIISLSSTGNLVY------------------------IENYAGHGTSKAAVETMVKYAATELGEKNIRVNA  192 (260)
T ss_pred             hhhccC-CEEEEEEeccccccC------------------------CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEE
Confidence              3434 468999999752211                        1122479999999999999988765   899999


Q ss_pred             EccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          149 VIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       149 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +.|+.+-.+.... ... ............   +          ..-+...+|++.+++.++...
T Consensus       193 v~PG~i~T~~~~~-~~~-~~~~~~~~~~~~---~----------~~r~~~p~~va~~~~~l~~~~  242 (260)
T PRK08416        193 VSGGPIDTDALKA-FTN-YEEVKAKTEELS---P----------LNRMGQPEDLAGACLFLCSEK  242 (260)
T ss_pred             EeeCcccChhhhh-ccC-CHHHHHHHHhcC---C----------CCCCCCHHHHHHHHHHHcChh
Confidence            9998875442110 000 011111111100   0          112567999999999988754

>PRK09072 short chain dehydrogenase; Provisional

Probab=98.80  E-value=7.8e-08  Score=78.79  Aligned_cols=157  Identities=19%  Similarity=0.186  Sum_probs=105.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CCC
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~~   78 (293)
                      .++.++.+|++|++.+.++++      .+|+|||+||......      .+. ...++.|+.++.++++.+..    .+ 
T Consensus        53 ~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~n~~g~~~l~~~~~~~~~~~~-  130 (263)
T PRK09072         53 GRHRWVVADLTSEAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAI-ERLLALNLTAPMQLTRALLPLLRAQP-  130 (263)
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHH-HHHHhhhhHHHHHHHHHHHHHHHhcC-
Confidence            478899999999988776654      5899999998754211      111 25777999999998888753    23 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..++|++||.....+..                        ....|+.+|...+.+++.++.++   ++.++.+.|+.+.
T Consensus       131 ~~~iv~isS~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~  186 (263)
T PRK09072        131 SAMVVNVGSTFGSIGYP------------------------GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATR  186 (263)
T ss_pred             CCEEEEecChhhCcCCC------------------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccc
Confidence            46899998875333211                        12479999999998888887653   7999999998775


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEE
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYI  220 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~  220 (293)
                      .+....        ...       ......       ...+..++|+|+.++.++++.. .++|.
T Consensus       187 t~~~~~--------~~~-------~~~~~~-------~~~~~~~~~va~~i~~~~~~~~-~~~~~  228 (263)
T PRK09072        187 TAMNSE--------AVQ-------ALNRAL-------GNAMDDPEDVAAAVLQAIEKER-AERWL  228 (263)
T ss_pred             ccchhh--------hcc-------cccccc-------cCCCCCHHHHHHHHHHHHhCCC-CEEec
Confidence            542110        000       000000       1235678999999999998763 23443

>PRK05855 short chain dehydrogenase; Validated

Probab=98.80  E-value=4.6e-08  Score=89.39  Aligned_cols=118  Identities=19%  Similarity=0.210  Sum_probs=87.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++.+|++|++++.++++       .+|++||+||......      ++.. ..+++|+.++.++++++.    +.+
T Consensus       364 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~g~~~~~~~~~~~~~~~~  442 (582)
T PRK05855        364 AVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWD-RVLDVNLWGVIHGCRLFGRQMVERG  442 (582)
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            368899999999998887765       4899999999854211      1122 667799999998887653    333


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                      .-.+||++||..++.+.                        .....|+.+|...+.+++.++.+   .|++++++.|+.|
T Consensus       443 ~~g~iv~~sS~~~~~~~------------------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v  498 (582)
T PRK05855        443 TGGHIVNVASAAAYAPS------------------------RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFV  498 (582)
T ss_pred             CCcEEEEECChhhccCC------------------------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCC
Confidence            12589999998643211                        12358999999999998887765   3899999999988


Q ss_pred             cCC
Q 035985          155 SGP  157 (293)
Q Consensus       155 ~G~  157 (293)
                      -.+
T Consensus       499 ~t~  501 (582)
T PRK05855        499 DTN  501 (582)
T ss_pred             ccc
Confidence            554

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=98.80  E-value=2.7e-08  Score=81.68  Aligned_cols=114  Identities=18%  Similarity=0.221  Sum_probs=85.2

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC---------------CCCccccchhHHHHHHHHHHHHH
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS---------------SDDPETDMIKPAIQGVVNVLKAC   73 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~---------------~~~~~~~~~~~n~~~~~~l~~~~   73 (293)
                      ++.++++|++|++++.++++       .+|+|||+||.....               .++.. ..++.|+.++..+++++
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~  128 (266)
T PRK06171         50 NYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFD-KMFNINQKGVFLMSQAV  128 (266)
T ss_pred             ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHH-HHHhhhchhHHHHHHHH
Confidence            57889999999998877664       579999999864211               01112 57889999999998887


Q ss_pred             hcC----CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceE
Q 035985           74 TKT----KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDL  146 (293)
Q Consensus        74 ~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~  146 (293)
                      ...    + ..++|++||.....+.                        .....|+.+|...+.+++.++.+   .|+++
T Consensus       129 ~~~~~~~~-~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v  183 (266)
T PRK06171        129 ARQMVKQH-DGVIVNMSSEAGLEGS------------------------EGQSCYAATKAALNSFTRSWAKELGKHNIRV  183 (266)
T ss_pred             HHHHHhcC-CcEEEEEccccccCCC------------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            643    3 3589999997633221                        12358999999999999988765   38999


Q ss_pred             EEEccCCcc
Q 035985          147 ITVIPSLMS  155 (293)
Q Consensus       147 ~ilR~~~v~  155 (293)
                      .+++|+.+-
T Consensus       184 ~~v~pG~~~  192 (266)
T PRK06171        184 VGVAPGILE  192 (266)
T ss_pred             EEEeccccc
Confidence            999999874

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.79  E-value=2.6e-08  Score=76.18  Aligned_cols=114  Identities=18%  Similarity=0.224  Sum_probs=85.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcCCCccE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKTKTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~   81 (293)
                      .++.++.+|+++++.+.++++       .+|.|||+|+.....      ..+.. .+++.|+.++.++++++++.+ .++
T Consensus        53 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~  130 (180)
T smart00822       53 AEVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFA-AVLAPKVDGAWNLHELTRDLP-LDF  130 (180)
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHH-HhhchHhHHHHHHHHHhccCC-cce
Confidence            367789999999888777654       369999999864311      11223 678899999999999998876 789


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCcc
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMS  155 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~  155 (293)
                      +|++||....++..                        ....|+.+|...+.+++... ..+++++.+.|+.+-
T Consensus       131 ii~~ss~~~~~~~~------------------------~~~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~  179 (180)
T smart00822      131 FVLFSSVAGVLGNP------------------------GQANYAAANAFLDALAAHRR-ARGLPATSINWGAWA  179 (180)
T ss_pred             EEEEccHHHhcCCC------------------------CchhhHHHHHHHHHHHHHHH-hcCCceEEEeecccc
Confidence            99999976544321                        12479999999999996655 458999988887653

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.79  E-value=1e-07  Score=84.33  Aligned_cols=115  Identities=18%  Similarity=0.122  Sum_probs=85.0

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcCC---Cc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKTK---TV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~   79 (293)
                      +...+.+|++|.+++.++++       .+|+|||+|+.....      ..... ..++.|+.++.++++++....   +-
T Consensus       257 ~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~-~~~~~n~~g~~~l~~~~~~~~~~~~~  335 (450)
T PRK08261        257 GGTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWD-SVLAVNLLAPLRITEALLAAGALGDG  335 (450)
T ss_pred             CCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHhhhhcCC
Confidence            34678899999988777654       589999999975421      11222 678899999999999887632   13


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      .+||++||...+.+..                        ....|+.+|...+.+++.++.+   .++++..+.|+.+-
T Consensus       336 g~iv~~SS~~~~~g~~------------------------~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~  390 (450)
T PRK08261        336 GRIVGVSSISGIAGNR------------------------GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIE  390 (450)
T ss_pred             CEEEEECChhhcCCCC------------------------CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCc
Confidence            6899999976443322                        2248999999888888877654   38999999999764

>PRK07023 short chain dehydrogenase; Provisional

Probab=98.78  E-value=2e-08  Score=81.26  Aligned_cols=116  Identities=17%  Similarity=0.175  Sum_probs=83.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-----------CCCEEEEecccCCCC--C-----CCccccchhHHHHHHHHHHHHHh--
Q 035985           15 GELKIFRADLTDEASFDAPIS-----------RSDIVFHVATPVNFS--S-----DDPETDMIKPAIQGVVNVLKACT--   74 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-----------~~d~Vih~a~~~~~~--~-----~~~~~~~~~~n~~~~~~l~~~~~--   74 (293)
                      .++.++++|++|.+++.+++.           .+|++||+|+.....  .     ++.. ..+..|+.+...+++.+.  
T Consensus        45 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~  123 (243)
T PRK07023         45 ERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIA-RAVGLNVAAPLMLTAALAQA  123 (243)
T ss_pred             CeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHH-HHeeeeehHHHHHHHHHHHH
Confidence            368889999999998877432           479999999875321  0     1122 667889988666655544  


Q ss_pred             --cCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh--CCceEEEEc
Q 035985           75 --KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE--NNIDLITVI  150 (293)
Q Consensus        75 --~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~--~~~~~~ilR  150 (293)
                        +.+ ..++|++||.....                        +..+...|+.+|...|.+++.++.+  .++++.+++
T Consensus       124 ~~~~~-~~~iv~isS~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~  178 (243)
T PRK07023        124 ASDAA-ERRILHISSGAARN------------------------AYAGWSVYCATKAALDHHARAVALDANRALRIVSLA  178 (243)
T ss_pred             hhccC-CCEEEEEeChhhcC------------------------CCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEec
Confidence              334 57999999975322                        1123458999999999999988764  489999999


Q ss_pred             cCCccC
Q 035985          151 PSLMSG  156 (293)
Q Consensus       151 ~~~v~G  156 (293)
                      |+.+-.
T Consensus       179 pg~~~t  184 (243)
T PRK07023        179 PGVVDT  184 (243)
T ss_pred             CCcccc
Confidence            998744

>PRK06483 dihydromonapterin reductase; Provisional

Probab=98.77  E-value=2.9e-07  Score=74.11  Aligned_cols=164  Identities=16%  Similarity=0.096  Sum_probs=103.3

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-CCC----ccccchhHHHHHHHHHHHHHhcC----C-C
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-SDD----PETDMIKPAIQGVVNVLKACTKT----K-T   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-~~~----~~~~~~~~n~~~~~~l~~~~~~~----~-~   78 (293)
                      ++.++.+|++|++++.++++       .+|++||+||..... ..+    ..+..++.|+.++..+.+++...    + .
T Consensus        47 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~  126 (236)
T PRK06483         47 GAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHA  126 (236)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCC
Confidence            47889999999988776653       489999999864311 111    11267788888887766655432    1 0


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccC
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSG  156 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G  156 (293)
                      ..++|++||.....+                        ......|+.+|...+.+++.++.+.  ++++..++|+.+.-
T Consensus       127 ~g~iv~~ss~~~~~~------------------------~~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~  182 (236)
T PRK06483        127 ASDIIHITDYVVEKG------------------------SDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILF  182 (236)
T ss_pred             CceEEEEcchhhccC------------------------CCCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceec
Confidence            358999998642111                        1123479999999999999998875  58999999998743


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEe
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICC  222 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~  222 (293)
                      .....      .......... ..+           .+ +...+|+++++..++......| .+.++
T Consensus       183 ~~~~~------~~~~~~~~~~-~~~-----------~~-~~~~~~va~~~~~l~~~~~~~G~~i~vd  230 (236)
T PRK06483        183 NEGDD------AAYRQKALAK-SLL-----------KI-EPGEEEIIDLVDYLLTSCYVTGRSLPVD  230 (236)
T ss_pred             CCCCC------HHHHHHHhcc-Ccc-----------cc-CCCHHHHHHHHHHHhcCCCcCCcEEEeC
Confidence            21110      1111111111 111           11 3458999999999887544444 33443

>PRK06924 short chain dehydrogenase; Provisional

Probab=98.76  E-value=5.5e-08  Score=79.05  Aligned_cols=166  Identities=17%  Similarity=0.079  Sum_probs=100.2

Q ss_pred             CCeEEEecCCCCCcchhhhhcCC-----------CEEEEecccCCCC--C-----CCccccchhHHHHHHHHHHHH----
Q 035985           15 GELKIFRADLTDEASFDAPISRS-----------DIVFHVATPVNFS--S-----DDPETDMIKPAIQGVVNVLKA----   72 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~-----------d~Vih~a~~~~~~--~-----~~~~~~~~~~n~~~~~~l~~~----   72 (293)
                      .+++++++|++|++++.++++.+           .++||+||.....  .     .+.. ..++.|+.+...+++.    
T Consensus        48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~  126 (251)
T PRK06924         48 SNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELI-TNVHLNLLAPMILTSTFMKH  126 (251)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHH-HHhccceehHHHHHHHHHHH
Confidence            46889999999999888777521           2788998864311  1     1112 4566687775555544    


Q ss_pred             HhcCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-----CCceEE
Q 035985           73 CTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-----NNIDLI  147 (293)
Q Consensus        73 ~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-----~~~~~~  147 (293)
                      +++.+..++||++||.....                        +..+...|+.+|...+.+++.++.+     .++++.
T Consensus       127 ~~~~~~~~~iv~~sS~~~~~------------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~  182 (251)
T PRK06924        127 TKDWKVDKRVINISSGAAKN------------------------PYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIV  182 (251)
T ss_pred             HhccCCCceEEEecchhhcC------------------------CCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEE
Confidence            44433246899999975211                        2223468999999999999988755     368999


Q ss_pred             EEccCCccCCCCCCC---CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc-CCCCCcE
Q 035985          148 TVIPSLMSGPSLTPD---IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK-ESASGRY  219 (293)
Q Consensus       148 ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~-~~~~~~y  219 (293)
                      .++|+.+-.+.....   ........... ..      ...       ..-+..++|+|+.++.++.. ....|.+
T Consensus       183 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~------~~~-------~~~~~~~~dva~~~~~l~~~~~~~~G~~  244 (251)
T PRK06924        183 AFSPGVMDTNMQAQIRSSSKEDFTNLDRF-IT------LKE-------EGKLLSPEYVAKALRNLLETEDFPNGEV  244 (251)
T ss_pred             EecCCccccHhHHHHHhcCcccchHHHHH-HH------Hhh-------cCCcCCHHHHHHHHHHHHhcccCCCCCE
Confidence            999997754421100   00000000000 00      000       11257799999999999886 3334443

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.74  E-value=2.4e-07  Score=75.37  Aligned_cols=159  Identities=11%  Similarity=0.035  Sum_probs=103.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-----C-----CCCccccchhHHHHHHHHHHHHHhcC-
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-----S-----SDDPETDMIKPAIQGVVNVLKACTKT-   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-----~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-   76 (293)
                      .++..+++|++|++++.++++       .+|++||+||....     .     .++.. ..++.|+.+...+++++... 
T Consensus        55 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~-~~~~in~~~~~~l~~~~~~~~  133 (252)
T PRK06079         55 EEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYA-LAQDISAYSLIAVAKYARPLL  133 (252)
T ss_pred             CceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHH-HHhCcccHHHHHHHHHHHHhc
Confidence            357889999999988877653       58999999986431     0     01122 56778998888888776542 


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      .+-.++|++||.....+                        ......|+.+|...+.+++.++.+.   |+++..+.|+.
T Consensus       134 ~~~g~Iv~iss~~~~~~------------------------~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~  189 (252)
T PRK06079        134 NPGASIVTLTYFGSERA------------------------IPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGA  189 (252)
T ss_pred             ccCceEEEEeccCcccc------------------------CCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCc
Confidence            11258999998652211                        0123479999999999999988753   89999999998


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      |-.+...... . ...+........   +          ..-+...+|+++++..++...
T Consensus       190 v~T~~~~~~~-~-~~~~~~~~~~~~---p----------~~r~~~pedva~~~~~l~s~~  234 (252)
T PRK06079        190 VKTLAVTGIK-G-HKDLLKESDSRT---V----------DGVGVTIEEVGNTAAFLLSDL  234 (252)
T ss_pred             ccccccccCC-C-hHHHHHHHHhcC---c----------ccCCCCHHHHHHHHHHHhCcc
Confidence            8655321100 0 011111111111   1          112566899999999988754

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=98.73  E-value=6.3e-08  Score=79.29  Aligned_cols=119  Identities=18%  Similarity=0.145  Sum_probs=86.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC--CC-C--------CccccchhHHHHHHHHHHHHHhcC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF--SS-D--------DPETDMIKPAIQGVVNVLKACTKT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~--~~-~--------~~~~~~~~~n~~~~~~l~~~~~~~   76 (293)
                      .++..+++|++|.+++.++++       .+|++||+||....  .. .        ... ..++.|+.++..+++++...
T Consensus        51 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~~  129 (262)
T TIGR03325        51 DAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFD-EVFHINVKGYLLAVKAALPA  129 (262)
T ss_pred             CceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHH-HhheeecHhHHHHHHHHHHH
Confidence            358889999999987776654       57999999986421  10 0        122 67889999999999888643


Q ss_pred             C--CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccC
Q 035985           77 K--TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPS  152 (293)
Q Consensus        77 ~--~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~  152 (293)
                      -  .-.++|++||...+.+.                        .....|+.+|...+.+++.++.+.  .+++..+.|+
T Consensus       130 ~~~~~g~iv~~sS~~~~~~~------------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG  185 (262)
T TIGR03325       130 LVASRGSVIFTISNAGFYPN------------------------GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPG  185 (262)
T ss_pred             HhhcCCCEEEEeccceecCC------------------------CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecC
Confidence            1  12478888886533211                        122479999999999999998875  3889999999


Q ss_pred             CccCCC
Q 035985          153 LMSGPS  158 (293)
Q Consensus       153 ~v~G~~  158 (293)
                      .+..+-
T Consensus       186 ~i~t~~  191 (262)
T TIGR03325       186 GMSSDL  191 (262)
T ss_pred             CCcCCC
Confidence            987653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.72  E-value=3.3e-08  Score=79.67  Aligned_cols=153  Identities=20%  Similarity=0.194  Sum_probs=101.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC----CCccccchhHHHHHHHHHHHHHhcC-CCccEE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS----DDPETDMIKPAIQGVVNVLKACTKT-KTVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~   82 (293)
                      .+++++++|+++++++.++++       .+|.+||+++......    .... ..++.|+.+...+++..... .+-.+|
T Consensus        53 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~~i  131 (238)
T PRK05786         53 GNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLE-EMLTNHIKIPLYAVNASLRFLKEGSSI  131 (238)
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHH-HHHHHhchHHHHHHHHHHHHHhcCCEE
Confidence            368899999999998877654       4699999998643111    1112 45678888887777766543 112579


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSL  159 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~  159 (293)
                      |++||....++                       +..+...|+.+|...+.+++.++.+.   +++++++||++++++..
T Consensus       132 v~~ss~~~~~~-----------------------~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~  188 (238)
T PRK05786        132 VLVSSMSGIYK-----------------------ASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFE  188 (238)
T ss_pred             EEEecchhccc-----------------------CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC
Confidence            99998753221                       11123479999999998888887653   89999999999998642


Q ss_pred             CCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          160 TPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ...      . ..   .    +..        ....++..+|+++.++.++..+
T Consensus       189 ~~~------~-~~---~----~~~--------~~~~~~~~~~va~~~~~~~~~~  220 (238)
T PRK05786        189 PER------N-WK---K----LRK--------LGDDMAPPEDFAKVIIWLLTDE  220 (238)
T ss_pred             chh------h-hh---h----hcc--------ccCCCCCHHHHHHHHHHHhccc
Confidence            110      0 00   0    000        0123466899999999998753

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.71  E-value=4.2e-08  Score=72.12  Aligned_cols=117  Identities=16%  Similarity=0.201  Sum_probs=91.7

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ..+..+..|+...+.+...++++|+.|-+-|.+.... ..+ ..+++.-+....++++|++.| |++|+.+||.++    
T Consensus        62 k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTRgka-Gad-gfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GA----  134 (238)
T KOG4039|consen   62 KVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTRGKA-GAD-GFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGA----  134 (238)
T ss_pred             ceeeeEEechHHHHHHHhhhcCCceEEEeeccccccc-ccC-ceEeechHHHHHHHHHHHhCC-CeEEEEEeccCC----
Confidence            4677888999998889999999999999888765332 233 778888888899999999999 999999999863    


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI  163 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~  163 (293)
                                            .+...-.|...|-+.|+-+.++.-   -.++|+||+.+.|.......
T Consensus       135 ----------------------d~sSrFlY~k~KGEvE~~v~eL~F---~~~~i~RPG~ll~~R~esr~  178 (238)
T KOG4039|consen  135 ----------------------DPSSRFLYMKMKGEVERDVIELDF---KHIIILRPGPLLGERTESRQ  178 (238)
T ss_pred             ----------------------Ccccceeeeeccchhhhhhhhccc---cEEEEecCcceecccccccc
Confidence                                  112234799999999988866542   26899999999998766543

>PRK08177 short chain dehydrogenase; Provisional

Probab=98.70  E-value=8.3e-08  Score=76.72  Aligned_cols=122  Identities=16%  Similarity=0.138  Sum_probs=84.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-----CCCEEEEecccCCCCC--------CCccccchhHHHHHHHHHHHHHhcC--CCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-----RSDIVFHVATPVNFSS--------DDPETDMIKPAIQGVVNVLKACTKT--KTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-----~~d~Vih~a~~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~   79 (293)
                      .++.++.+|++|++++.++++     ++|+|||+||......        .+. ...+..|+.++..+++++...  ...
T Consensus        45 ~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~  123 (225)
T PRK08177         45 PGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEI-GQLFLTNAIAPIRLARRLLGQVRPGQ  123 (225)
T ss_pred             cccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHH-hhheeeeeeHHHHHHHHHHHhhhhcC
Confidence            467888999999988877665     5899999998753211        112 256778888888888877533  113


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .+++++||.....+..                     +..+...|+.+|...+.+++.++.++   ++.+..++|+.+-.
T Consensus       124 ~~iv~~ss~~g~~~~~---------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t  182 (225)
T PRK08177        124 GVLAFMSSQLGSVELP---------------------DGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKT  182 (225)
T ss_pred             CEEEEEccCccccccC---------------------CCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceec
Confidence            5788888753111100                     11223479999999999999987663   68999999998855


Q ss_pred             CC
Q 035985          157 PS  158 (293)
Q Consensus       157 ~~  158 (293)
                      +.
T Consensus       183 ~~  184 (225)
T PRK08177        183 DM  184 (225)
T ss_pred             CC
Confidence            43

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=98.70  E-value=8.8e-08  Score=78.48  Aligned_cols=119  Identities=19%  Similarity=0.135  Sum_probs=85.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC--CC-CCc-------cccchhHHHHHHHHHHHHHhcC-
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF--SS-DDP-------ETDMIKPAIQGVVNVLKACTKT-   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~--~~-~~~-------~~~~~~~n~~~~~~l~~~~~~~-   76 (293)
                      .++.++++|++|++++.++++       .+|++||+||....  .. ..+       .+..++.|+.++..+++++... 
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  131 (263)
T PRK06200         52 DHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPAL  131 (263)
T ss_pred             CcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHH
Confidence            357889999999988877654       58999999996431  11 111       1245778999988888777532 


Q ss_pred             -CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCC
Q 035985           77 -KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSL  153 (293)
Q Consensus        77 -~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~  153 (293)
                       .+-.++|++||...+.+.                        .....|+.+|...+.+++.++.+.  ++++..+.|+.
T Consensus       132 ~~~~g~iv~~sS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~  187 (263)
T PRK06200        132 KASGGSMIFTLSNSSFYPG------------------------GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGG  187 (263)
T ss_pred             HhcCCEEEEECChhhcCCC------------------------CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCc
Confidence             112589999997643321                        123479999999999999988764  58999999998


Q ss_pred             ccCC
Q 035985          154 MSGP  157 (293)
Q Consensus       154 v~G~  157 (293)
                      +..+
T Consensus       188 i~t~  191 (263)
T PRK06200        188 TVTD  191 (263)
T ss_pred             cccC
Confidence            8655

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.70  E-value=1e-07  Score=88.45  Aligned_cols=147  Identities=20%  Similarity=0.235  Sum_probs=104.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-----C---CCccccchhHHHHHHHHHHHHH----hc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-----S---DDPETDMIKPAIQGVVNVLKAC----TK   75 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-----~---~~~~~~~~~~n~~~~~~l~~~~----~~   75 (293)
                      .++.++.+|++|.+++.++++       ++|++||+||.....     .   ++.. ..+..|+.++.++++++    ++
T Consensus       420 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~  498 (657)
T PRK07201        420 GTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYE-RTMAVNYFGAVRLILGLLPHMRE  498 (657)
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhhh
Confidence            468899999999998887765       589999999964211     0   1223 67889999988876665    34


Q ss_pred             CCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccC
Q 035985           76 TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPS  152 (293)
Q Consensus        76 ~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~  152 (293)
                      .+ ..+||++||.+.+.+.                        .....|+.+|...+.+++.++.+.   ++++++++|+
T Consensus       499 ~~-~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg  553 (657)
T PRK07201        499 RR-FGHVVNVSSIGVQTNA------------------------PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMP  553 (657)
T ss_pred             cC-CCEEEEECChhhcCCC------------------------CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECC
Confidence            45 6799999998643211                        123479999999999999887653   8999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .|..+...+..              .  .   .       ....+..+++|+.++..+...
T Consensus       554 ~v~T~~~~~~~--------------~--~---~-------~~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        554 LVRTPMIAPTK--------------R--Y---N-------NVPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             cCcccccCccc--------------c--c---c-------CCCCCCHHHHHHHHHHHHHhC
Confidence            98765422110              0  0   0       122456899999999987653

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=98.70  E-value=1e-06  Score=72.31  Aligned_cols=156  Identities=19%  Similarity=0.156  Sum_probs=98.6

Q ss_pred             CeEEEecCCCCCcch----hhhh-------cCCCEEEEecccCCCCC---CCc-------------cccchhHHHHHHHH
Q 035985           16 ELKIFRADLTDEASF----DAPI-------SRSDIVFHVATPVNFSS---DDP-------------ETDMIKPAIQGVVN   68 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~----~~~~-------~~~d~Vih~a~~~~~~~---~~~-------------~~~~~~~n~~~~~~   68 (293)
                      ++..+.+|++|.+.+    .+++       .++|+|||+||......   .+.             ....++.|+.++..
T Consensus        53 ~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~  132 (267)
T TIGR02685        53 SAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYF  132 (267)
T ss_pred             ceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHH
Confidence            466789999999754    3332       36899999999643110   010             11558899999988


Q ss_pred             HHHHHhcCC---------CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHH
Q 035985           69 VLKACTKTK---------TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFA  139 (293)
Q Consensus        69 l~~~~~~~~---------~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~  139 (293)
                      +++++....         +..++|++||.....                        +..+...|+.+|...+.+++.++
T Consensus       133 l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~------------------------~~~~~~~Y~asK~a~~~~~~~la  188 (267)
T TIGR02685       133 LIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQ------------------------PLLGFTMYTMAKHALEGLTRSAA  188 (267)
T ss_pred             HHHHHHHHhhhcccccCCCCeEEEEehhhhccC------------------------CCcccchhHHHHHHHHHHHHHHH
Confidence            887654221         123677777753210                        11234589999999999999987


Q ss_pred             Hh---CCceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          140 QE---NNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       140 ~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+   .|+++++++|+.+..+...+      ......+... .  +.         ...+...+|++++++.++...
T Consensus       189 ~e~~~~gi~v~~v~PG~~~~~~~~~------~~~~~~~~~~-~--~~---------~~~~~~~~~va~~~~~l~~~~  247 (267)
T TIGR02685       189 LELAPLQIRVNGVAPGLSLLPDAMP------FEVQEDYRRK-V--PL---------GQREASAEQIADVVIFLVSPK  247 (267)
T ss_pred             HHHhhhCeEEEEEecCCccCccccc------hhHHHHHHHh-C--CC---------CcCCCCHHHHHHHHHHHhCcc
Confidence            76   48999999999886553211      1111111111 1  11         112356899999999988754

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08703 short chain dehydrogenase; Provisional

Probab=98.67  E-value=1.5e-07  Score=75.99  Aligned_cols=147  Identities=18%  Similarity=0.153  Sum_probs=97.3

Q ss_pred             CeEEEecCCCCC--cchhhhh--------cCCCEEEEecccCCC-C--CCCcc---ccchhHHHHHHHHHHHHHhc----
Q 035985           16 ELKIFRADLTDE--ASFDAPI--------SRSDIVFHVATPVNF-S--SDDPE---TDMIKPAIQGVVNVLKACTK----   75 (293)
Q Consensus        16 ~v~~v~~Dl~d~--~~~~~~~--------~~~d~Vih~a~~~~~-~--~~~~~---~~~~~~n~~~~~~l~~~~~~----   75 (293)
                      .+..+.+|+++.  +.+.+++        ..+|+|||+||.... .  .....   ...++.|+.++.++++++..    
T Consensus        57 ~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~  136 (239)
T PRK08703         57 EPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQ  136 (239)
T ss_pred             CcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence            567788999763  3344332        468999999996421 1  11111   14678999998888877743    


Q ss_pred             CCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC----CceEEEEcc
Q 035985           76 TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN----NIDLITVIP  151 (293)
Q Consensus        76 ~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~----~~~~~ilR~  151 (293)
                      .+ ..++|++||.....                        +......|+.+|...+.+++.++.+.    ++++++++|
T Consensus       137 ~~-~~~iv~~ss~~~~~------------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~p  191 (239)
T PRK08703        137 SP-DASVIFVGESHGET------------------------PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVP  191 (239)
T ss_pred             CC-CCEEEEEecccccc------------------------CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEec
Confidence            33 46899999864221                        11123479999999999999887764    589999999


Q ss_pred             CCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc
Q 035985          152 SLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK  212 (293)
Q Consensus       152 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~  212 (293)
                      +.|.++......           .+..              .......+|++.++..++..
T Consensus       192 G~v~t~~~~~~~-----------~~~~--------------~~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        192 GPINSPQRIKSH-----------PGEA--------------KSERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             CcccCccccccC-----------CCCC--------------ccccCCHHHHHHHHHHHhCc
Confidence            999887532110           0000              11234688999999998874

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.66  E-value=4.5e-07  Score=74.16  Aligned_cols=158  Identities=14%  Similarity=0.048  Sum_probs=101.1

Q ss_pred             eEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CC--C--ccccchhHHHHHHHHHHHHHhcC-CC
Q 035985           17 LKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SD--D--PETDMIKPAIQGVVNVLKACTKT-KT   78 (293)
Q Consensus        17 v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~--~--~~~~~~~~n~~~~~~l~~~~~~~-~~   78 (293)
                      ...+++|++|++++.++++       .+|++||+||.....      ..  +  ..+..+++|+.+...+++++... .+
T Consensus        58 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~  137 (260)
T PRK06997         58 DLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD  137 (260)
T ss_pred             cceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence            4568899999998887764       589999999875321      00  1  11256788999998888776542 11


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      -.++|++||.....+                        ......|+.+|...+.+.+.++.+.   |+++..+.|+.+-
T Consensus       138 ~g~Ii~iss~~~~~~------------------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~  193 (260)
T PRK06997        138 DASLLTLSYLGAERV------------------------VPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIK  193 (260)
T ss_pred             CceEEEEeccccccC------------------------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccc
Confidence            358999998653211                        0122479999999999999988753   7999999999885


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+-... ... .......+...   .+          ..-+...+|+++++..++...
T Consensus       194 T~~~~~-~~~-~~~~~~~~~~~---~p----------~~r~~~pedva~~~~~l~s~~  236 (260)
T PRK06997        194 TLAASG-IKD-FGKILDFVESN---AP----------LRRNVTIEEVGNVAAFLLSDL  236 (260)
T ss_pred             cchhcc-ccc-hhhHHHHHHhc---Cc----------ccccCCHHHHHHHHHHHhCcc
Confidence            532110 000 01111111111   01          112467899999999998753

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.66  E-value=5.5e-07  Score=74.10  Aligned_cols=167  Identities=14%  Similarity=0.111  Sum_probs=104.9

Q ss_pred             eEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC----------CCCccccchhHHHHHHHHHHHHHhcC-CC
Q 035985           17 LKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS----------SDDPETDMIKPAIQGVVNVLKACTKT-KT   78 (293)
Q Consensus        17 v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~   78 (293)
                      ...+++|++|++++.++++       .+|++||+||.....          ..+.. ..+..|+.++..+++++... .+
T Consensus        59 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~-~~~~vn~~~~~~l~~~~~~~m~~  137 (271)
T PRK06505         59 DFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFS-RTMVISCFSFTEIAKRAAKLMPD  137 (271)
T ss_pred             ceEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHH-HHHhhhhhhHHHHHHHHHHhhcc
Confidence            4578999999998877653       589999999964310          11122 66788999988888766532 11


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      -.++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..|.|+.+-
T Consensus       138 ~G~Iv~isS~~~~~~~------------------------~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~  193 (271)
T PRK06505        138 GGSMLTLTYGGSTRVM------------------------PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVR  193 (271)
T ss_pred             CceEEEEcCCCccccC------------------------CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcc
Confidence            2589999987532111                        122479999999999999988764   7999999999886


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE-EEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY-ICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y-~~~~  223 (293)
                      .+.... ... ........... .++            .-+...+|++++++.++....  ..|.. .++|
T Consensus       194 T~~~~~-~~~-~~~~~~~~~~~-~p~------------~r~~~peeva~~~~fL~s~~~~~itG~~i~vdg  249 (271)
T PRK06505        194 TLAGAG-IGD-ARAIFSYQQRN-SPL------------RRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDS  249 (271)
T ss_pred             cccccc-Ccc-hHHHHHHHhhc-CCc------------cccCCHHHHHHHHHHHhCccccccCceEEeecC
Confidence            653211 000 00111111111 111            113568999999999887533  23433 4544

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.65  E-value=1.6e-07  Score=76.73  Aligned_cols=160  Identities=12%  Similarity=0.013  Sum_probs=100.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC----C-C-C-Cc--cccchhHHHHHHHHHHHHHhcC-C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF----S-S-D-DP--ETDMIKPAIQGVVNVLKACTKT-K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~----~-~-~-~~--~~~~~~~n~~~~~~l~~~~~~~-~   77 (293)
                      .++..+++|++|++++.++++       .+|++||+|+....    . . . +.  ....++.|+.+...+++++... .
T Consensus        59 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~  138 (257)
T PRK08594         59 QESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMT  138 (257)
T ss_pred             CceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcc
Confidence            468889999999998877663       48999999986431    0 0 0 11  1145677888887777666532 1


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      +-.++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..+.|+.+
T Consensus       139 ~~g~Iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v  194 (257)
T PRK08594        139 EGGSIVTLTYLGGERVV------------------------QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPI  194 (257)
T ss_pred             cCceEEEEcccCCccCC------------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcc
Confidence            12589999997532111                        122479999999999999887654   799999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      -.+.... ... .......+.. .  .+          ..-+...+|++++++.++...
T Consensus       195 ~T~~~~~-~~~-~~~~~~~~~~-~--~p----------~~r~~~p~~va~~~~~l~s~~  238 (257)
T PRK08594        195 RTLSAKG-VGG-FNSILKEIEE-R--AP----------LRRTTTQEEVGDTAAFLFSDL  238 (257)
T ss_pred             cCHhHhh-hcc-ccHHHHHHhh-c--CC----------ccccCCHHHHHHHHHHHcCcc
Confidence            6542110 000 0000111110 0  00          122456899999999988754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=98.65  E-value=2.9e-07  Score=75.18  Aligned_cols=159  Identities=12%  Similarity=0.088  Sum_probs=102.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-----CCC----CccccchhHHHHHHHHHHHHHhcC-CC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-----SSD----DPETDMIKPAIQGVVNVLKACTKT-KT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-----~~~----~~~~~~~~~n~~~~~~l~~~~~~~-~~   78 (293)
                      .+.++++|++|++++.++++       .+|++||+||....     ...    +..+..++.|+.++..+++++... .+
T Consensus        60 ~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~  139 (258)
T PRK07370         60 PSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE  139 (258)
T ss_pred             cceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh
Confidence            46788999999998877664       58999999996421     110    111267888999988888776532 11


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      -.++|++||.....+                        ......|+.+|...+.+.+.++.+.   |+++..+.|+.+-
T Consensus       140 ~g~Iv~isS~~~~~~------------------------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~  195 (258)
T PRK07370        140 GGSIVTLTYLGGVRA------------------------IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIR  195 (258)
T ss_pred             CCeEEEEeccccccC------------------------CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCccc
Confidence            258999999652211                        1123479999999999999988764   7999999999886


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+.... ... .......+...   .+          ..-+...+|++.++..++...
T Consensus       196 T~~~~~-~~~-~~~~~~~~~~~---~p----------~~r~~~~~dva~~~~fl~s~~  238 (258)
T PRK07370        196 TLASSA-VGG-ILDMIHHVEEK---AP----------LRRTVTQTEVGNTAAFLLSDL  238 (258)
T ss_pred             Cchhhc-ccc-chhhhhhhhhc---CC----------cCcCCCHHHHHHHHHHHhChh
Confidence            542110 000 00111111110   00          122556899999999988754

>PRK08339 short chain dehydrogenase; Provisional

Probab=98.64  E-value=2.1e-07  Score=76.24  Aligned_cols=117  Identities=18%  Similarity=0.206  Sum_probs=84.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHH----hcCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKAC----TKTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~   78 (293)
                      .++.++++|++|++++.++++      .+|++||+||.....      .++.. ..++.|+.+...+++++    ++.+ 
T Consensus        58 ~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~l~~m~~~~-  135 (263)
T PRK08339         58 VDVSYIVADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWE-GAVKLLLYPAVYLTRALVPAMERKG-  135 (263)
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            368899999999998887765      589999999864311      11222 66778877766655544    4444 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..+.|+.+-
T Consensus       136 ~g~Ii~isS~~~~~~~------------------------~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~  191 (263)
T PRK08339        136 FGRIIYSTSVAIKEPI------------------------PNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIR  191 (263)
T ss_pred             CCEEEEEcCccccCCC------------------------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCc
Confidence            5789999997632111                        112479999999999999887764   7999999999885


Q ss_pred             CC
Q 035985          156 GP  157 (293)
Q Consensus       156 G~  157 (293)
                      .+
T Consensus       192 T~  193 (263)
T PRK08339        192 TD  193 (263)
T ss_pred             cH
Confidence            54

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=98.64  E-value=2.5e-07  Score=75.03  Aligned_cols=148  Identities=18%  Similarity=0.192  Sum_probs=97.4

Q ss_pred             CCeEEEecCCC--CCcchhhh-------hcCCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHh----
Q 035985           15 GELKIFRADLT--DEASFDAP-------ISRSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACT----   74 (293)
Q Consensus        15 ~~v~~v~~Dl~--d~~~~~~~-------~~~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----   74 (293)
                      .++.++.+|++  +.+.+.++       +..+|+|||+|+.....       ..... ..++.|+.++.++++++.    
T Consensus        62 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~-~~~~~n~~g~~~~~~~~~~~l~  140 (247)
T PRK08945         62 PQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQ-DVMQVNVNATFMLTQALLPLLL  140 (247)
T ss_pred             CCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHH-HHHHHccHHHHHHHHHHHHHHH
Confidence            35778888886  44444433       33689999999864311       11122 678899999888887764    


Q ss_pred             cCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEcc
Q 035985           75 KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIP  151 (293)
Q Consensus        75 ~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~  151 (293)
                      +.+ .++||++||.....+.                        .....|+.+|...+.+++.++.+.   ++++++++|
T Consensus       141 ~~~-~~~iv~~ss~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~p  195 (247)
T PRK08945        141 KSP-AASLVFTSSSVGRQGR------------------------ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINP  195 (247)
T ss_pred             hCC-CCEEEEEccHhhcCCC------------------------CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEec
Confidence            445 6899999997533221                        123479999999999998887655   688999999


Q ss_pred             CCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          152 SLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       152 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +.+-.+.....           ....       .       ...+...+|++..+..++...
T Consensus       196 g~v~t~~~~~~-----------~~~~-------~-------~~~~~~~~~~~~~~~~~~~~~  232 (247)
T PRK08945        196 GGTRTAMRASA-----------FPGE-------D-------PQKLKTPEDIMPLYLYLMGDD  232 (247)
T ss_pred             CCccCcchhhh-----------cCcc-------c-------ccCCCCHHHHHHHHHHHhCcc
Confidence            87754421100           0000       0       122456899999999987654

>PRK06484 short chain dehydrogenase; Validated

Probab=98.63  E-value=3.1e-07  Score=82.86  Aligned_cols=117  Identities=17%  Similarity=0.194  Sum_probs=86.1

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC--------CCCCccccchhHHHHHHHHHHHHHhcC----
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF--------SSDDPETDMIKPAIQGVVNVLKACTKT----   76 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~----   76 (293)
                      ++.++++|++|++++.++++       .+|++||+||....        ...+.. .+++.|+.++..+++++...    
T Consensus        52 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~  130 (520)
T PRK06484         52 DHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFA-RLQAINLTGAYLVAREALRLMIEQ  130 (520)
T ss_pred             ceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhc
Confidence            57789999999998877664       58999999986321        111122 67889999999888877643    


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      +.-.++|++||.....+.+                        ....|+.+|...+.+++.++.+.   +++++.+.|+.
T Consensus       131 ~~g~~iv~isS~~~~~~~~------------------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~  186 (520)
T PRK06484        131 GHGAAIVNVASGAGLVALP------------------------KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGY  186 (520)
T ss_pred             CCCCeEEEECCcccCCCCC------------------------CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCC
Confidence            3123899999976432211                        12479999999999999887653   79999999998


Q ss_pred             ccCC
Q 035985          154 MSGP  157 (293)
Q Consensus       154 v~G~  157 (293)
                      +-.+
T Consensus       187 v~t~  190 (520)
T PRK06484        187 VRTQ  190 (520)
T ss_pred             cCch
Confidence            8554

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.63  E-value=7.1e-07  Score=73.05  Aligned_cols=159  Identities=13%  Similarity=0.031  Sum_probs=99.6

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CC-Cc---cccchhHHHHHHHHHHHHHhcC--
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SD-DP---ETDMIKPAIQGVVNVLKACTKT--   76 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~-~~---~~~~~~~n~~~~~~l~~~~~~~--   76 (293)
                      ....+++|++|++++.++++       ++|++||+||.....      .. .+   ....++.|+.+...+.+++...  
T Consensus        57 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~  136 (261)
T PRK08690         57 SELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMR  136 (261)
T ss_pred             CceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhh
Confidence            45678999999998887763       589999999975321      01 11   1144567888877777654321  


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                      ++-.++|++||.....+.                        .....|+.+|...+.+.+.++.+   +|+++..+.|+.
T Consensus       137 ~~~g~Iv~iss~~~~~~~------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~  192 (261)
T PRK08690        137 GRNSAIVALSYLGAVRAI------------------------PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGP  192 (261)
T ss_pred             hcCcEEEEEcccccccCC------------------------CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCc
Confidence            112579999987532211                        12347999999999998887654   489999999998


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +-.+.... ... .......+... .+            ..-+...+|+|+++..++...
T Consensus       193 v~T~~~~~-~~~-~~~~~~~~~~~-~p------------~~r~~~peevA~~v~~l~s~~  237 (261)
T PRK08690        193 IKTLAASG-IAD-FGKLLGHVAAH-NP------------LRRNVTIEEVGNTAAFLLSDL  237 (261)
T ss_pred             ccchhhhc-CCc-hHHHHHHHhhc-CC------------CCCCCCHHHHHHHHHHHhCcc
Confidence            86542111 000 01111111111 11            112566899999999999854

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=98.62  E-value=9.8e-07  Score=70.98  Aligned_cols=164  Identities=13%  Similarity=0.119  Sum_probs=105.7

Q ss_pred             CCeEEEecCCCCCcchhhhh---cCCCEEEEecccCCCCC---C------C--ccccchhHHHHHHHHHHHHHhc----C
Q 035985           15 GELKIFRADLTDEASFDAPI---SRSDIVFHVATPVNFSS---D------D--PETDMIKPAIQGVVNVLKACTK----T   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~---~~~d~Vih~a~~~~~~~---~------~--~~~~~~~~n~~~~~~l~~~~~~----~   76 (293)
                      +++.++++|+++.++++++.   .++|+|||+||......   .      +  .....+..|+.+...+++.+..    .
T Consensus        43 ~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~  122 (235)
T PRK09009         43 DNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS  122 (235)
T ss_pred             CceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc
Confidence            46889999999998776654   47899999999864211   0      0  0114577888888777766643    2


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-----CCceEEEEcc
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-----NNIDLITVIP  151 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-----~~~~~~ilR~  151 (293)
                      + ..+++++||....           +.+.          +..+...|+.+|...+.+++.++.+     .++.+..+.|
T Consensus       123 ~-~~~i~~iss~~~~-----------~~~~----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~P  180 (235)
T PRK09009        123 E-SAKFAVISAKVGS-----------ISDN----------RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHP  180 (235)
T ss_pred             C-CceEEEEeecccc-----------cccC----------CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcc
Confidence            3 4689998874311           0100          1112348999999999999988765     3788999999


Q ss_pred             CCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE-EEeccC
Q 035985          152 SLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY-ICCAVN  225 (293)
Q Consensus       152 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y-~~~~~~  225 (293)
                      +.+-.+....        +.    . .  .+          ...+...+|+++.++.++....  ..|.+ .+.|..
T Consensus       181 G~v~t~~~~~--------~~----~-~--~~----------~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~  232 (235)
T PRK09009        181 GTTDTALSKP--------FQ----Q-N--VP----------KGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGET  232 (235)
T ss_pred             cceecCCCcc--------hh----h-c--cc----------cCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCcC
Confidence            9876553211        00    0 0  00          1224679999999999987653  34544 445543

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.61  E-value=2.2e-07  Score=75.12  Aligned_cols=114  Identities=21%  Similarity=0.144  Sum_probs=81.4

Q ss_pred             CeEEEecCCCCCcchhhhh-------cCCCEEEEecccCCCCCCC-----ccccchhHHHHHHHHHHHHHh----cCCCc
Q 035985           16 ELKIFRADLTDEASFDAPI-------SRSDIVFHVATPVNFSSDD-----PETDMIKPAIQGVVNVLKACT----KTKTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~----~~~~~   79 (293)
                      ++.++++|++|.+++.+++       .++|++||.||.......+     .....+++|+.|+..+.+++.    +.+ -
T Consensus        64 ~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~  142 (282)
T KOG1205|consen   64 KVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-D  142 (282)
T ss_pred             ccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-C
Confidence            5999999999999888665       3799999999987411111     112578899999888877764    444 4


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEE----EEccCCc
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLI----TVIPSLM  154 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~----ilR~~~v  154 (293)
                      .|+|.+||+....+.+                        ..+.|+.||.+.+.+...+..+..-..+    ++-||.|
T Consensus       143 GhIVvisSiaG~~~~P------------------------~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V  197 (282)
T KOG1205|consen  143 GHIVVISSIAGKMPLP------------------------FRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPI  197 (282)
T ss_pred             CeEEEEeccccccCCC------------------------cccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCce
Confidence            7999999986433221                        2238999999999999999887632222    3556554

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.60  E-value=8.1e-07  Score=72.58  Aligned_cols=158  Identities=12%  Similarity=0.082  Sum_probs=101.7

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC----------CCCCccccchhHHHHHHHHHHHHHhcC-C
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF----------SSDDPETDMIKPAIQGVVNVLKACTKT-K   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~   77 (293)
                      .+.++++|++|.+++.++++       .+|++||+||....          +.++.. ..+++|+.+...+++++... .
T Consensus        61 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~-~~~~vN~~~~~~~~~~~~p~m~  139 (258)
T PRK07533         61 APIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFA-LAMDVSCHSFIRMARLAEPLMT  139 (258)
T ss_pred             cceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHH-HHHhhhhHHHHHHHHHHHHHhc
Confidence            45678999999998877653       58999999986431          011122 67889999999988876532 1


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      +-.++|++||.....+                        ......|+.+|...+.+.+.++.+.   |+++..+.|+.+
T Consensus       140 ~~g~Ii~iss~~~~~~------------------------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v  195 (258)
T PRK07533        140 NGGSLLTMSYYGAEKV------------------------VENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPL  195 (258)
T ss_pred             cCCEEEEEeccccccC------------------------CccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCc
Confidence            1247899988642110                        0122479999999999999887653   799999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      -.+-.... .. ...........   .+          ..-+...+|++.+++.++...
T Consensus       196 ~T~~~~~~-~~-~~~~~~~~~~~---~p----------~~r~~~p~dva~~~~~L~s~~  239 (258)
T PRK07533        196 KTRAASGI-DD-FDALLEDAAER---AP----------LRRLVDIDDVGAVAAFLASDA  239 (258)
T ss_pred             CChhhhcc-CC-cHHHHHHHHhc---CC----------cCCCCCHHHHHHHHHHHhChh
Confidence            65432110 00 01111111111   11          112567899999999988753

>PRK05599 hypothetical protein; Provisional

Probab=98.59  E-value=2.1e-06  Score=69.58  Aligned_cols=155  Identities=14%  Similarity=0.126  Sum_probs=99.4

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--C-Cc--cccchhHHHHHHHHHHHH----HhcCCCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--D-DP--ETDMIKPAIQGVVNVLKA----CTKTKTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~-~~--~~~~~~~n~~~~~~l~~~----~~~~~~~   79 (293)
                      .+.++++|++|+++++++++       ++|++||+||......  . +.  ..+....|+.+...++..    ..+.+.-
T Consensus        50 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~  129 (246)
T PRK05599         50 SVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAP  129 (246)
T ss_pred             ceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCC
Confidence            47889999999998876653       5899999999753211  0 11  113455677776655443    3333213


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .++|++||.....+.                        .....|+.+|...+.+.+.++.+.   +++++.+.|+.+..
T Consensus       130 g~Iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T  185 (246)
T PRK05599        130 AAIVAFSSIAGWRAR------------------------RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIG  185 (246)
T ss_pred             CEEEEEeccccccCC------------------------cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccc
Confidence            589999997532211                        122479999999999999887763   78999999998865


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEe
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICC  222 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~  222 (293)
                      +...               +...     .       .. ....+|+|+.++.++........+...
T Consensus       186 ~~~~---------------~~~~-----~-------~~-~~~pe~~a~~~~~~~~~~~~~~~~~~~  223 (246)
T PRK05599        186 SMTT---------------GMKP-----A-------PM-SVYPRDVAAAVVSAITSSKRSTTLWIP  223 (246)
T ss_pred             hhhc---------------CCCC-----C-------CC-CCCHHHHHHHHHHHHhcCCCCceEEeC
Confidence            4211               0000     0       00 135899999999999876544444443

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.59  E-value=2e-07  Score=78.08  Aligned_cols=113  Identities=17%  Similarity=0.163  Sum_probs=82.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC------
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT------   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~------   76 (293)
                      .++.++.+|++|.+.+.++++      .+|+|||+||.....      ..+.. ..++.|+.++.++++++...      
T Consensus        62 ~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~-~~~~vn~~g~~~l~~~~~~~~~~~~~  140 (306)
T PRK07792         62 AKAVAVAGDISQRATADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWD-AVIAVHLRGHFLLTRNAAAYWRAKAK  140 (306)
T ss_pred             CeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhhHHHHHHHHHHHHHHHhhc
Confidence            468889999999988877664      589999999976421      11222 67889999999998876421      


Q ss_pred             --C--CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEE
Q 035985           77 --K--TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITV  149 (293)
Q Consensus        77 --~--~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~il  149 (293)
                        +  .-.++|++||.....+..                        ....|+.+|...+.+++.++.+   +|+++..+
T Consensus       141 ~~~~~~~g~iv~isS~~~~~~~~------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i  196 (306)
T PRK07792        141 AAGGPVYGRIVNTSSEAGLVGPV------------------------GQANYGAAKAGITALTLSAARALGRYGVRANAI  196 (306)
T ss_pred             ccCCCCCcEEEEECCcccccCCC------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence              0  014899999975332211                        2247999999999999888765   48999999


Q ss_pred             ccC
Q 035985          150 IPS  152 (293)
Q Consensus       150 R~~  152 (293)
                      .|+
T Consensus       197 ~Pg  199 (306)
T PRK07792        197 CPR  199 (306)
T ss_pred             CCC
Confidence            886

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.58  E-value=9.6e-07  Score=72.26  Aligned_cols=159  Identities=15%  Similarity=0.076  Sum_probs=100.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------C-Cc---cccchhHHHHHHHHHHHHHhcC-
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------D-DP---ETDMIKPAIQGVVNVLKACTKT-   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~-~~---~~~~~~~n~~~~~~l~~~~~~~-   76 (293)
                      +.+..+.+|++|+++++++++       .+|++||+||......      . ..   ....++.|+.+...+.+++... 
T Consensus        56 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~  135 (262)
T PRK07984         56 GSDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML  135 (262)
T ss_pred             CCceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence            356788999999998887763       4799999998643110      0 01   1145677888887777765421 


Q ss_pred             -CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccC
Q 035985           77 -KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPS  152 (293)
Q Consensus        77 -~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~  152 (293)
                       + -.++|++||.....+                        ......|+.+|...+.+++.++.+.   ++++..+-|+
T Consensus       136 ~~-~g~Iv~iss~~~~~~------------------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG  190 (262)
T PRK07984        136 NP-GSALLTLSYLGAERA------------------------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAG  190 (262)
T ss_pred             cC-CcEEEEEecCCCCCC------------------------CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecC
Confidence             2 257999988652111                        0112479999999999999988753   7999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+-.+... .... ...........   .+          ..-+...+|++.+++.++...
T Consensus       191 ~v~T~~~~-~~~~-~~~~~~~~~~~---~p----------~~r~~~pedva~~~~~L~s~~  236 (262)
T PRK07984        191 PIRTLAAS-GIKD-FRKMLAHCEAV---TP----------IRRTVTIEDVGNSAAFLCSDL  236 (262)
T ss_pred             cccchHHh-cCCc-hHHHHHHHHHc---CC----------CcCCCCHHHHHHHHHHHcCcc
Confidence            88553211 0001 11111111111   00          122467899999999988753

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=98.56  E-value=2.3e-07  Score=75.70  Aligned_cols=118  Identities=15%  Similarity=0.131  Sum_probs=82.6

Q ss_pred             CeEEEecCCCCCcchhhhhcC-----------CCEEEEecccCCCC---C---CC--ccccchhHHHHHHHHHHHHHhcC
Q 035985           16 ELKIFRADLTDEASFDAPISR-----------SDIVFHVATPVNFS---S---DD--PETDMIKPAIQGVVNVLKACTKT   76 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~-----------~d~Vih~a~~~~~~---~---~~--~~~~~~~~n~~~~~~l~~~~~~~   76 (293)
                      ++.++.+|++|++++.++++.           .|++||+||.....   .   .+  ..+..+++|+.++..+.+++...
T Consensus        56 ~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~  135 (256)
T TIGR01500        56 RVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKA  135 (256)
T ss_pred             eEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            578899999999988776641           26899999864211   1   11  11267889999987777665432


Q ss_pred             -----CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEE
Q 035985           77 -----KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLIT  148 (293)
Q Consensus        77 -----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~i  148 (293)
                           +.-.++|++||.....+.                        .....|+.+|...+.+++.++.+.   ++.++.
T Consensus       136 l~~~~~~~~~iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~  191 (256)
T TIGR01500       136 FKDSPGLNRTVVNISSLCAIQPF------------------------KGWALYCAGKAARDMLFQVLALEEKNPNVRVLN  191 (256)
T ss_pred             HhhcCCCCCEEEEECCHHhCCCC------------------------CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence                 212589999997532211                        123479999999999999887653   799999


Q ss_pred             EccCCccCC
Q 035985          149 VIPSLMSGP  157 (293)
Q Consensus       149 lR~~~v~G~  157 (293)
                      +.|+.+-.+
T Consensus       192 v~PG~v~T~  200 (256)
T TIGR01500       192 YAPGVLDTD  200 (256)
T ss_pred             ecCCcccch
Confidence            999988543

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=98.55  E-value=1.1e-06  Score=74.02  Aligned_cols=193  Identities=11%  Similarity=0.047  Sum_probs=106.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC----CC--ccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS----DD--PETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~----~~--~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++.+|++|.+++.++++       ++|++||+||......    .+  ..+..+++|+.+...+++++.    +.+
T Consensus        53 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~  132 (314)
T TIGR01289        53 DSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSP  132 (314)
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCC
Confidence            357888999999988776653       5899999999643110    01  112578899999877766543    332


Q ss_pred             -CccEEEEecccchhcccccCCCCccccCCC-------CCch-h-hhccCCCCCchhHHHHHHHHHHHHHHHHh----CC
Q 035985           78 -TVKRVILTSSAAAVSINAQNVTGLVMDEKN-------WTDV-E-FLSSEKPPTWGYAASKTLAERAACKFAQE----NN  143 (293)
Q Consensus        78 -~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~-------~~~~-~-~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~----~~  143 (293)
                       ...++|++||..............+.+.++       +... . ....+..+...|+.||.....+.+.++++    .+
T Consensus       133 ~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g  212 (314)
T TIGR01289       133 NKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETG  212 (314)
T ss_pred             CCCCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCC
Confidence             136999999986432110000000000000       0000 0 00002234467999999988888877654    37


Q ss_pred             ceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcEEE
Q 035985          144 IDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRYIC  221 (293)
Q Consensus       144 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y~~  221 (293)
                      +.++.++|+.|...............+......  . .           ...+...++.++.++.++....  .+|.|..
T Consensus       213 i~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~--~-~-----------~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       213 ITFASLYPGCIADTGLFREHVPLFRTLFPPFQK--Y-I-----------TKGYVSEEEAGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             eEEEEecCCcccCCcccccccHHHHHHHHHHHH--H-H-----------hccccchhhhhhhhHHhhcCcccCCCceeee
Confidence            999999999986433221111111111111000  0 0           0114568888888888776532  3456643

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=98.55  E-value=6e-08  Score=59.76  Aligned_cols=54  Identities=22%  Similarity=0.355  Sum_probs=33.4

Q ss_pred             HHHhCCCCCCCCCCCCCCcc--cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          235 LNKRFPEYKVPTDFGDFPSE--AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       235 i~~~~~~~~~~~~~~~~~~~--~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +.++.|+ +++..+.+...+  ..++.|++|+++ |||+|+++|+++++.+.+|.+++
T Consensus         2 ~e~vtG~-~i~~~~~~rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~n   58 (62)
T PF13950_consen    2 FEKVTGK-KIPVEYAPRRPGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKN   58 (62)
T ss_dssp             HHHHHTS----EEEE---TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHS
T ss_pred             cHHHHCC-CCCceECCCCCCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHC
Confidence            4555563 566665554444  788999999998 99999999999999999999886

...

>PRK07062 short chain dehydrogenase; Provisional

Probab=98.55  E-value=5.6e-07  Score=73.81  Aligned_cols=116  Identities=19%  Similarity=0.194  Sum_probs=81.7

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~   78 (293)
                      ++..+.+|++|.+++.++++       .+|++||+||......      .+.. ..++.|+.+...+++++    ++.+ 
T Consensus        60 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~-  137 (265)
T PRK07062         60 RLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWR-DELELKYFSVINPTRAFLPLLRASA-  137 (265)
T ss_pred             eEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhccC-
Confidence            57789999999988876653       5799999999753111      1122 55677877766665544    4444 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..++|++||.....+.                        .....|+.+|...+.+++.++.+   .|++++.++|+.+-
T Consensus       138 ~g~iv~isS~~~~~~~------------------------~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~  193 (265)
T PRK07062        138 AASIVCVNSLLALQPE------------------------PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVE  193 (265)
T ss_pred             CcEEEEeccccccCCC------------------------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence            4689999997532211                        12247999999999888877665   38999999999886


Q ss_pred             CC
Q 035985          156 GP  157 (293)
Q Consensus       156 G~  157 (293)
                      .+
T Consensus       194 t~  195 (265)
T PRK07062        194 SG  195 (265)
T ss_pred             cc
Confidence            55

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.55  E-value=1.5e-06  Score=71.13  Aligned_cols=157  Identities=12%  Similarity=0.083  Sum_probs=100.1

Q ss_pred             eEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-----C-----CCCccccchhHHHHHHHHHHHHHhcC-CC
Q 035985           17 LKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-----S-----SDDPETDMIKPAIQGVVNVLKACTKT-KT   78 (293)
Q Consensus        17 v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-----~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~   78 (293)
                      ..++++|++|+++++++++       .+|++||.|+....     .     ..+.. ..++.|+.+...+++++... .+
T Consensus        60 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~-~~~~vn~~~~~~~~~~~~~~m~~  138 (260)
T PRK06603         60 NFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFH-NSLHISCYSLLELSRSAEALMHD  138 (260)
T ss_pred             ceEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHH-HHHHHHHHHHHHHHHHHHhhhcc
Confidence            3467899999998887764       58999999986421     0     01122 57888999988888766422 11


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      -.++|++||.....+.                        .....|+.+|...+.+.+.++.+   +|+++..+.|+.+-
T Consensus       139 ~G~Iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~  194 (260)
T PRK06603        139 GGSIVTLTYYGAEKVI------------------------PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIK  194 (260)
T ss_pred             CceEEEEecCccccCC------------------------CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCc
Confidence            2589999986532110                        11247999999999999988775   37999999999886


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+.... .... ......+...   .+          ..-+...+|++++++.++...
T Consensus       195 T~~~~~-~~~~-~~~~~~~~~~---~p----------~~r~~~pedva~~~~~L~s~~  237 (260)
T PRK06603        195 TLASSA-IGDF-STMLKSHAAT---AP----------LKRNTTQEDVGGAAVYLFSEL  237 (260)
T ss_pred             chhhhc-CCCc-HHHHHHHHhc---CC----------cCCCCCHHHHHHHHHHHhCcc
Confidence            542110 0000 1111111111   11          112466899999999998753

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=98.54  E-value=4.2e-07  Score=74.27  Aligned_cols=118  Identities=17%  Similarity=0.132  Sum_probs=80.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC----CCCcc---ccchhHHHHHHHHHHH----HHh-c
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS----SDDPE---TDMIKPAIQGVVNVLK----ACT-K   75 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~----~~~~~---~~~~~~n~~~~~~l~~----~~~-~   75 (293)
                      .++.++++|++|++++.++++       .+|+|||+||.....    .....   .+.+..|+.+...+..    ... +
T Consensus        48 ~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~  127 (259)
T PRK08340         48 GEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEK  127 (259)
T ss_pred             CCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhc
Confidence            368889999999998877763       589999999964311    01111   1334556665544433    332 2


Q ss_pred             CCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccC
Q 035985           76 TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPS  152 (293)
Q Consensus        76 ~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~  152 (293)
                      .+ ..+||++||.....                        +..+...|+.+|...+.+.+.++.++   |+++..+.|+
T Consensus       128 ~~-~g~iv~isS~~~~~------------------------~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG  182 (259)
T PRK08340        128 KM-KGVLVYLSSVSVKE------------------------PMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLG  182 (259)
T ss_pred             CC-CCEEEEEeCcccCC------------------------CCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccC
Confidence            23 46899999975321                        11223589999999999999988765   7999999999


Q ss_pred             CccCC
Q 035985          153 LMSGP  157 (293)
Q Consensus       153 ~v~G~  157 (293)
                      .+-.+
T Consensus       183 ~v~t~  187 (259)
T PRK08340        183 SFDTP  187 (259)
T ss_pred             cccCc
Confidence            87555

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.52  E-value=4e-07  Score=74.94  Aligned_cols=169  Identities=17%  Similarity=0.103  Sum_probs=106.7

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-----C-----CCCccccchhHHHHHHHHHHHHHhcC-C
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-----S-----SDDPETDMIKPAIQGVVNVLKACTKT-K   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-----~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~   77 (293)
                      .+..+++|++|+++++++++       .+|++||+||....     .     .++. +..+++|+.++..+++++... .
T Consensus        61 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~-~~~~~vN~~~~~~l~~~~~~~~~  139 (272)
T PRK08159         61 AFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNF-TMTMDISVYSFTAVAQRAEKLMT  139 (272)
T ss_pred             CceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHH-HHHHhHHHHHHHHHHHHHHHhcC
Confidence            45678999999998887754       48999999986531     0     1112 267889999999998877643 1


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      +-.++|++||.....                        +......|+.+|...+.+++.++.+.   ++++..+.|+.+
T Consensus       140 ~~g~Iv~iss~~~~~------------------------~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v  195 (272)
T PRK08159        140 DGGSILTLTYYGAEK------------------------VMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPI  195 (272)
T ss_pred             CCceEEEEecccccc------------------------CCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCc
Confidence            125899998864211                        11122479999999999999887764   799999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE-EEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY-ICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y-~~~~~  224 (293)
                      -.+.... ... .......... .  .+.          .-+...+|+|++++.++....  ..|.. .++|.
T Consensus       196 ~T~~~~~-~~~-~~~~~~~~~~-~--~p~----------~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG  253 (272)
T PRK08159        196 KTLAASG-IGD-FRYILKWNEY-N--APL----------RRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSG  253 (272)
T ss_pred             CCHHHhc-CCc-chHHHHHHHh-C--Ccc----------cccCCHHHHHHHHHHHhCccccCccceEEEECCC
Confidence            6532110 000 0000010000 1  111          124668999999999987543  34544 55443

>PLN00015 protochlorophyllide reductase

Probab=98.51  E-value=1.8e-06  Score=72.50  Aligned_cols=143  Identities=13%  Similarity=0.086  Sum_probs=84.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC--C----CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS--S----DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~--~----~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++++|++|.+++.++++       .+|++||+||.....  .    .+..+..+++|+.++..+++++.    +.+
T Consensus        47 ~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~  126 (308)
T PLN00015         47 DSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSD  126 (308)
T ss_pred             CeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence            357888999999998877653       589999999874311  1    11112678899999877766543    322


Q ss_pred             C-ccEEEEecccchhcccccCCCCccccCCC----------CCchh-hhccCCCCCchhHHHHHHHHHHHHHHHHh----
Q 035985           78 T-VKRVILTSSAAAVSINAQNVTGLVMDEKN----------WTDVE-FLSSEKPPTWGYAASKTLAERAACKFAQE----  141 (293)
Q Consensus        78 ~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~----------~~~~~-~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~----  141 (293)
                      . ..++|++||................+-+.          ..... .......+...|+.||...+.+.+.++++    
T Consensus       127 ~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~  206 (308)
T PLN00015        127 YPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEE  206 (308)
T ss_pred             CCCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhccc
Confidence            0 25899999975321100000000000000          00000 00001123457999999977777777664    


Q ss_pred             CCceEEEEccCCccCC
Q 035985          142 NNIDLITVIPSLMSGP  157 (293)
Q Consensus       142 ~~~~~~ilR~~~v~G~  157 (293)
                      .|+.++.+.|+.|...
T Consensus       207 ~gi~v~~v~PG~v~~t  222 (308)
T PLN00015        207 TGITFASLYPGCIATT  222 (308)
T ss_pred             CCeEEEEecCCcccCc
Confidence            3799999999999644

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.51  E-value=5.5e-07  Score=74.20  Aligned_cols=156  Identities=12%  Similarity=0.102  Sum_probs=99.9

Q ss_pred             EEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-----C-----CCCccccchhHHHHHHHHHHHHHhcC-CCc
Q 035985           18 KIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-----S-----SDDPETDMIKPAIQGVVNVLKACTKT-KTV   79 (293)
Q Consensus        18 ~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-----~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~   79 (293)
                      ..+++|++|.+++.++++       .+|++||+||....     .     .++. +..+++|+.+...+.+++... ..-
T Consensus        58 ~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~p~m~~~  136 (274)
T PRK08415         58 YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAF-NIAMEISVYSLIELTRALLPLLNDG  136 (274)
T ss_pred             eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHH-HHHhhhhhHHHHHHHHHHHHHhccC
Confidence            578999999998877653       58999999996421     0     0112 267889999998888776532 112


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..+.|+.+-.
T Consensus       137 g~Iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T  192 (274)
T PRK08415        137 ASVLTLSYLGGVKYV------------------------PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKT  192 (274)
T ss_pred             CcEEEEecCCCccCC------------------------CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccc
Confidence            589999986522111                        112479999999999999988753   79999999998865


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +.... ... ......... ..  .+.          .-+...+|++++++.++...
T Consensus       193 ~~~~~-~~~-~~~~~~~~~-~~--~pl----------~r~~~pedva~~v~fL~s~~  234 (274)
T PRK08415        193 LAASG-IGD-FRMILKWNE-IN--APL----------KKNVSIEEVGNSGMYLLSDL  234 (274)
T ss_pred             HHHhc-cch-hhHHhhhhh-hh--Cch----------hccCCHHHHHHHHHHHhhhh
Confidence            42110 000 000000000 00  111          12466899999999988753

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.50  E-value=1.6e-07  Score=72.25  Aligned_cols=112  Identities=19%  Similarity=0.252  Sum_probs=77.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC---CCc--cccchhHHHHHHHHHHHHHhcCCCccEE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS---DDP--ETDMIKPAIQGVVNVLKACTKTKTVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~---~~~--~~~~~~~n~~~~~~l~~~~~~~~~~~~~   82 (293)
                      .++.++.+|++|++++.+++.       .++.|||+|+......   .++  ....+..-+.++.+|.++..... ++.|
T Consensus        53 ~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~  131 (181)
T PF08659_consen   53 ARVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFF  131 (181)
T ss_dssp             -EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEE
T ss_pred             CceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeE
Confidence            478999999999999988874       4689999999864221   111  12556677999999999998877 8999


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPS  152 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~  152 (293)
                      |.+||...+.|...+                        ..|+..-...+.+....... +.+++.+.-+
T Consensus       132 i~~SSis~~~G~~gq------------------------~~YaaAN~~lda~a~~~~~~-g~~~~sI~wg  176 (181)
T PF08659_consen  132 ILFSSISSLLGGPGQ------------------------SAYAAANAFLDALARQRRSR-GLPAVSINWG  176 (181)
T ss_dssp             EEEEEHHHHTT-TTB------------------------HHHHHHHHHHHHHHHHHHHT-TSEEEEEEE-
T ss_pred             EEECChhHhccCcch------------------------HhHHHHHHHHHHHHHHHHhC-CCCEEEEEcc
Confidence            999999877765543                        48999999999888876554 8998888654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.49  E-value=1.2e-06  Score=70.87  Aligned_cols=128  Identities=18%  Similarity=0.193  Sum_probs=91.0

Q ss_pred             ccccchhcccCCCCeEEEecCCCCCcchhhhhc---------CCCEEEEecccCCCCC-------CCccccchhHHHHHH
Q 035985            3 KKISPLIALQELGELKIFRADLTDEASFDAPIS---------RSDIVFHVATPVNFSS-------DDPETDMIKPAIQGV   66 (293)
Q Consensus         3 ~~~~~l~~~~~~~~v~~v~~Dl~d~~~~~~~~~---------~~d~Vih~a~~~~~~~-------~~~~~~~~~~n~~~~   66 (293)
                      +.++.|+.....++...++.|++++++++++.+         +.=.|||+||......       ++.. ...+.|+.|+
T Consensus        64 ~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~-~~l~vNllG~  142 (322)
T KOG1610|consen   64 EGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYR-KVLNVNLLGT  142 (322)
T ss_pred             chHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHH-HHHhhhhhhH
Confidence            444555554434789999999999999998864         4689999999653111       2233 6788898887


Q ss_pred             HHHHHH----HhcCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-
Q 035985           67 VNVLKA----CTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-  141 (293)
Q Consensus        67 ~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-  141 (293)
                      ..+..+    .+++.  .|+|++||...   ..                     +.....+|+.||...|.+...+.++ 
T Consensus       143 irvT~~~lpLlr~ar--GRvVnvsS~~G---R~---------------------~~p~~g~Y~~SK~aVeaf~D~lR~EL  196 (322)
T KOG1610|consen  143 IRVTKAFLPLLRRAR--GRVVNVSSVLG---RV---------------------ALPALGPYCVSKFAVEAFSDSLRREL  196 (322)
T ss_pred             HHHHHHHHHHHHhcc--CeEEEeccccc---Cc---------------------cCcccccchhhHHHHHHHHHHHHHHH
Confidence            666554    45554  69999999752   11                     1223468999999999888877655 


Q ss_pred             --CCceEEEEccCCccCCC
Q 035985          142 --NNIDLITVIPSLMSGPS  158 (293)
Q Consensus       142 --~~~~~~ilR~~~v~G~~  158 (293)
                        +|+++.++-|+ +|-..
T Consensus       197 ~~fGV~VsiiePG-~f~T~  214 (322)
T KOG1610|consen  197 RPFGVKVSIIEPG-FFKTN  214 (322)
T ss_pred             HhcCcEEEEeccC-ccccc
Confidence              49999999999 44443

>PRK05884 short chain dehydrogenase; Provisional

Probab=98.48  E-value=1e-06  Score=70.24  Aligned_cols=112  Identities=14%  Similarity=0.108  Sum_probs=83.2

Q ss_pred             CeEEEecCCCCCcchhhhhc----CCCEEEEecccCCC-----------CCCCccccchhHHHHHHHHHHHHHhcC-CCc
Q 035985           16 ELKIFRADLTDEASFDAPIS----RSDIVFHVATPVNF-----------SSDDPETDMIKPAIQGVVNVLKACTKT-KTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~----~~d~Vih~a~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~   79 (293)
                      ++.++++|++|++++.++++    .+|++||+|+....           ...+.. ..++.|+.++..+++++... .+-
T Consensus        45 ~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~-~~~~~N~~~~~~~~~~~~~~~~~~  123 (223)
T PRK05884         45 DVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWR-NALDATVLSAVLTVQSVGDHLRSG  123 (223)
T ss_pred             cCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHH-HHHHHHHHHHHHHHHHHHHHhhcC
Confidence            46788999999998888775    58999999874210           111223 77889999999999887642 112


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      .++|++||.. .   +                        ....|+.+|...+.+++.++.+   .|+++..+.|+.+-.
T Consensus       124 g~Iv~isS~~-~---~------------------------~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t  175 (223)
T PRK05884        124 GSIISVVPEN-P---P------------------------AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQ  175 (223)
T ss_pred             CeEEEEecCC-C---C------------------------CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCc
Confidence            5899998853 0   0                        1247999999999999988775   379999999998753

>PRK06125 short chain dehydrogenase; Provisional

Probab=98.48  E-value=1.1e-06  Score=71.77  Aligned_cols=117  Identities=9%  Similarity=0.072  Sum_probs=84.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc---CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCCCccE
Q 035985           15 GELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTKTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~   81 (293)
                      .++.++.+|++|++++.++++   .+|++||+||......      ++.. ..++.|+.+...+++++    ++.+ ..+
T Consensus        57 ~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~-~g~  134 (259)
T PRK06125         57 VDVAVHALDLSSPEAREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWR-AGWELKVFGYIDLTRLAYPRMKARG-SGV  134 (259)
T ss_pred             CceEEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC-CcE
Confidence            357889999999998877765   5899999998653211      1122 56788999988888766    3333 358


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGP  157 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~  157 (293)
                      +|++||.....                        +......|+.+|...+.+++.++.+   .|++++.+.|+.+-.+
T Consensus       135 iv~iss~~~~~------------------------~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~  189 (259)
T PRK06125        135 IVNVIGAAGEN------------------------PDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD  189 (259)
T ss_pred             EEEecCccccC------------------------CCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence            99998864211                        1112347899999999999988654   3899999999988655

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.45  E-value=4.3e-06  Score=68.19  Aligned_cols=169  Identities=16%  Similarity=0.076  Sum_probs=104.2

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CC-Ccc--ccchhHHHHHHHHHHHHHhcC-CC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SD-DPE--TDMIKPAIQGVVNVLKACTKT-KT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~-~~~--~~~~~~n~~~~~~l~~~~~~~-~~   78 (293)
                      ++.++++|++|++++.++++       .+|++||+||.....      .. +..  ...+++|+.+...+++++... .+
T Consensus        58 ~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~  137 (256)
T PRK07889         58 PAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE  137 (256)
T ss_pred             CCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc
Confidence            57789999999998877653       589999999875310      01 111  146789999988887776532 11


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      -.++|++|+.. ..+                        ......|+.+|...+.+.+.++.+   .|+++..+.|+.+-
T Consensus       138 ~g~Iv~is~~~-~~~------------------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~  192 (256)
T PRK07889        138 GGSIVGLDFDA-TVA------------------------WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIR  192 (256)
T ss_pred             CceEEEEeecc-ccc------------------------CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCccc
Confidence            24788887542 110                        011246899999999999988765   37999999999886


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE-EEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY-ICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y-~~~~  223 (293)
                      .+.... ... .......+... .++           .+.+...+|+|++++.++....  ..|.+ .++|
T Consensus       193 T~~~~~-~~~-~~~~~~~~~~~-~p~-----------~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdg  249 (256)
T PRK07889        193 TLAAKA-IPG-FELLEEGWDER-APL-----------GWDVKDPTPVARAVVALLSDWFPATTGEIVHVDG  249 (256)
T ss_pred             Chhhhc-ccC-cHHHHHHHHhc-Ccc-----------ccccCCHHHHHHHHHHHhCcccccccceEEEEcC
Confidence            543211 000 01111111111 000           1235678999999999887543  23443 4544

>PRK07791 short chain dehydrogenase; Provisional

Probab=98.45  E-value=6.4e-07  Score=74.32  Aligned_cols=165  Identities=17%  Similarity=0.168  Sum_probs=104.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++.+|++|.+++.++++       .+|++||+||.....      ..+.. ..+++|+.++..+++++..    ..
T Consensus        64 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~  142 (286)
T PRK07791         64 GEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWD-AVIAVHLKGHFATLRHAAAYWRAES  142 (286)
T ss_pred             CceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHccHHHHHHHHHHHHHHHHhc
Confidence            357889999999988776653       589999999975321      11122 6788999999888877642    11


Q ss_pred             -----CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEE
Q 035985           78 -----TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITV  149 (293)
Q Consensus        78 -----~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~il  149 (293)
                           ...+||++||.....+.+                        ....|+.+|...+.+.+.++.+   .|+++..|
T Consensus       143 ~~~~~~~g~Iv~isS~~~~~~~~------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v  198 (286)
T PRK07791        143 KAGRAVDARIINTSSGAGLQGSV------------------------GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAI  198 (286)
T ss_pred             ccCCCCCcEEEEeCchhhCcCCC------------------------CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEE
Confidence                 014899999976433211                        1247999999999999888765   48999999


Q ss_pred             ccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE-EEecc
Q 035985          150 IPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY-ICCAV  224 (293)
Q Consensus       150 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y-~~~~~  224 (293)
                      .|+ +..+.    .....    ........           .+...+...+|++++++.++....  ..|.+ .++|.
T Consensus       199 ~Pg-~~T~~----~~~~~----~~~~~~~~-----------~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG  256 (286)
T PRK07791        199 APA-ARTRM----TETVF----AEMMAKPE-----------EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGG  256 (286)
T ss_pred             CCC-CCCCc----chhhH----HHHHhcCc-----------ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCC
Confidence            997 42111    00111    11111100           111234569999999999886532  34544 55443

>PLN02780 ketoreductase/ oxidoreductase

Probab=98.41  E-value=1.3e-06  Score=73.50  Aligned_cols=119  Identities=20%  Similarity=0.239  Sum_probs=81.0

Q ss_pred             CeEEEecCCCC--Ccchh---hhhc--CCCEEEEecccCCCC---C-CCc---cccchhHHHHHHHHHHHHHh----cCC
Q 035985           16 ELKIFRADLTD--EASFD---APIS--RSDIVFHVATPVNFS---S-DDP---ETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        16 ~v~~v~~Dl~d--~~~~~---~~~~--~~d~Vih~a~~~~~~---~-~~~---~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      ++..+.+|+++  .+.+.   +.+.  ++|++||+||.....   . +..   .+..+++|+.++..+++++.    +.+
T Consensus       105 ~~~~~~~Dl~~~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~  184 (320)
T PLN02780        105 QIKTVVVDFSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK  184 (320)
T ss_pred             EEEEEEEECCCCcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Confidence            57778899985  22222   3333  356999999975311   1 111   12578899999988888764    344


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..++|++||........                      ......|+.+|...+.+.+.++.+.   |++++++.|+.+
T Consensus       185 -~g~IV~iSS~a~~~~~~----------------------~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v  241 (320)
T PLN02780        185 -KGAIINIGSGAAIVIPS----------------------DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYV  241 (320)
T ss_pred             -CcEEEEEechhhccCCC----------------------CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCce
Confidence             57899999976432110                      0113589999999999999987664   799999999988


Q ss_pred             cCC
Q 035985          155 SGP  157 (293)
Q Consensus       155 ~G~  157 (293)
                      -.+
T Consensus       242 ~T~  244 (320)
T PLN02780        242 ATK  244 (320)
T ss_pred             ecC
Confidence            544

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.35  E-value=2e-06  Score=65.17  Aligned_cols=102  Identities=23%  Similarity=0.191  Sum_probs=78.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCCC-----CccccchhHHHHHHHHHHHHHhcCCCccEE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSD-----DPETDMIKPAIQGVVNVLKACTKTKTVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   82 (293)
                      .+++++++|++++++++++++       .+|++||+||.......     +..+.+++.|+.+...+.+++...+ -.++
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~i  130 (167)
T PF00106_consen   52 AKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKI  130 (167)
T ss_dssp             SEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccce
Confidence            578999999999998887764       58999999998752211     1113788899999999999888744 6799


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE  141 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~  141 (293)
                      |++||.....+.+                        ....|+.+|...+.+++.++++
T Consensus       131 v~~sS~~~~~~~~------------------------~~~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  131 VNISSIAGVRGSP------------------------GMSAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             EEEEEGGGTSSST------------------------TBHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecchhhccCCC------------------------CChhHHHHHHHHHHHHHHHHHh
Confidence            9999986443221                        2358999999999999998876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12367 short chain dehydrogenase; Provisional

Probab=98.30  E-value=1e-05  Score=65.53  Aligned_cols=138  Identities=12%  Similarity=0.106  Sum_probs=87.1

Q ss_pred             EEEecCCCCCcchhhhhcCCCEEEEecccCCCC---CCCccccchhHHHHHHHHHHHHHhcC------CCccEEEEeccc
Q 035985           18 KIFRADLTDEASFDAPISRSDIVFHVATPVNFS---SDDPETDMIKPAIQGVVNVLKACTKT------KTVKRVILTSSA   88 (293)
Q Consensus        18 ~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~SS~   88 (293)
                      ..+.+|++|.+++.+.+.++|++||+||.....   .++.. ..+++|+.++..+++++...      +.-..++..||.
T Consensus        61 ~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~  139 (245)
T PRK12367         61 EWIKWECGKEESLDKQLASLDVLILNHGINPGGRQDPENIN-KALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSE  139 (245)
T ss_pred             eEEEeeCCCHHHHHHhcCCCCEEEECCccCCcCCCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecc
Confidence            578899999999998888999999999974321   12233 77899999999999876532      101234444443


Q ss_pred             chhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHH---HHHHH---hCCceEEEEccCCccCCCCCCC
Q 035985           89 AAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAA---CKFAQ---ENNIDLITVIPSLMSGPSLTPD  162 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~---~~~~~---~~~~~~~ilR~~~v~G~~~~~~  162 (293)
                      ....                        + .....|+.+|...+.+.   .+++.   ..++.+..+.|+.+-.+.    
T Consensus       140 a~~~------------------------~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~----  190 (245)
T PRK12367        140 AEIQ------------------------P-ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSEL----  190 (245)
T ss_pred             cccC------------------------C-CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCccccc----
Confidence            2111                        0 01246999999976433   22221   236777777776542110    


Q ss_pred             CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          163 IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                                   .        .        ...+..+|+|+.++.++.+.+
T Consensus       191 -------------~--------~--------~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        191 -------------N--------P--------IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             -------------C--------c--------cCCCCHHHHHHHHHHHHhcCC
Confidence                         0        0        113558999999999887653

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=98.29  E-value=1.2e-05  Score=69.46  Aligned_cols=139  Identities=13%  Similarity=0.058  Sum_probs=87.1

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCC---CccccchhHHHHHHHHHHHHHhc----CCC---ccEEEEe
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSD---DPETDMIKPAIQGVVNVLKACTK----TKT---VKRVILT   85 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~----~~~---~~~~v~~   85 (293)
                      ++..+.+|++|.+.+.+.+.++|++||+||.......   +.. ..+++|+.++.++++++..    .+.   -..+|.+
T Consensus       225 ~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~-~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~  303 (406)
T PRK07424        225 PVKTLHWQVGQEAALAELLEKVDILIINHGINVHGERTPEAIN-KSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNT  303 (406)
T ss_pred             CeEEEEeeCCCHHHHHHHhCCCCEEEECCCcCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence            4678899999999999999999999999987532211   223 7789999999999988753    220   1234555


Q ss_pred             cccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCc
Q 035985           86 SSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPS  165 (293)
Q Consensus        86 SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~  165 (293)
                      |++. ..                        + .....|+.+|...+.+..-.....++.+..+.|+    +.....   
T Consensus       304 Ssa~-~~------------------------~-~~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~g----p~~t~~---  350 (406)
T PRK07424        304 SEAE-VN------------------------P-AFSPLYELSKRALGDLVTLRRLDAPCVVRKLILG----PFKSNL---  350 (406)
T ss_pred             cccc-cc------------------------C-CCchHHHHHHHHHHHHHHHHHhCCCCceEEEEeC----CCcCCC---
Confidence            4421 11                        1 0123699999999887643222234434443333    221110   


Q ss_pred             cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          166 SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                                         .       ....+..+|+|+.++.+++.++
T Consensus       351 -------------------~-------~~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        351 -------------------N-------PIGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             -------------------C-------cCCCCCHHHHHHHHHHHHHCCC
Confidence                               0       1123568999999999997653

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=98.29  E-value=8.5e-07  Score=71.66  Aligned_cols=169  Identities=21%  Similarity=0.176  Sum_probs=106.5

Q ss_pred             CeEEEecCCCCCcchhhhh--------cCCCEEEEecccCCC--CCCC-------ccccchhHHHHHHHHHHHHHhcC-C
Q 035985           16 ELKIFRADLTDEASFDAPI--------SRSDIVFHVATPVNF--SSDD-------PETDMIKPAIQGVVNVLKACTKT-K   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~--------~~~d~Vih~a~~~~~--~~~~-------~~~~~~~~n~~~~~~l~~~~~~~-~   77 (293)
                      +..++++|+++++++.+++        ..+|++||+++....  ....       .....++.|+.+...+++++... .
T Consensus        45 ~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (241)
T PF13561_consen   45 GAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMK  124 (241)
T ss_dssp             TSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3557999999998877764        468999999987643  0111       11267778888888888777432 1


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh----CCceEEEEccCC
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE----NNIDLITVIPSL  153 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~----~~~~~~ilR~~~  153 (293)
                      +-.++|++||.....                        +......|+.+|...+.+++.++.+    +|+++..|.|+.
T Consensus       125 ~~gsii~iss~~~~~------------------------~~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~  180 (241)
T PF13561_consen  125 KGGSIINISSIAAQR------------------------PMPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGP  180 (241)
T ss_dssp             HEEEEEEEEEGGGTS------------------------BSTTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESS
T ss_pred             hCCCcccccchhhcc------------------------cCccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccc
Confidence            125799999875321                        1112348999999999999987653    489999999998


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC--CCCCcE-EEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE--SASGRY-ICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~--~~~~~y-~~~~  223 (293)
                      +-.+.....  .....+.......   .+          ..-+...+|+|.+++.++...  ...|.. .++|
T Consensus       181 i~t~~~~~~--~~~~~~~~~~~~~---~p----------l~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDG  238 (241)
T PF13561_consen  181 IETPMTERI--PGNEEFLEELKKR---IP----------LGRLGTPEEVANAVLFLASDAASYITGQVIPVDG  238 (241)
T ss_dssp             BSSHHHHHH--HTHHHHHHHHHHH---ST----------TSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred             eeccchhcc--ccccchhhhhhhh---hc----------cCCCcCHHHHHHHHHHHhCccccCccCCeEEECC
Confidence            865421000  0011111111111   11          122567999999999999865  334543 4543

...

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.24  E-value=3.5e-06  Score=64.94  Aligned_cols=179  Identities=18%  Similarity=0.123  Sum_probs=108.1

Q ss_pred             cchhcccCCCCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCCCCccccchhHHHHHHHHH----HHHHh
Q 035985            6 SPLIALQELGELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNV----LKACT   74 (293)
Q Consensus         6 ~~l~~~~~~~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l----~~~~~   74 (293)
                      ..|+.......+.++++|+++..+++++++       .+|++||-||...+.  +.+ .+..+|+.|..+-    +....
T Consensus        46 akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~dk--d~e-~Ti~vNLtgvin~T~~alpyMd  122 (261)
T KOG4169|consen   46 AKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILDDK--DWE-RTINVNLTGVINGTQLALPYMD  122 (261)
T ss_pred             HHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEcccccccch--hHH-Hhhccchhhhhhhhhhhhhhhh
Confidence            345554444689999999999988888875       489999999987632  444 8888887765554    44443


Q ss_pred             cC--CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHH-----HhCCceEE
Q 035985           75 KT--KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFA-----QENNIDLI  147 (293)
Q Consensus        75 ~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~-----~~~~~~~~  147 (293)
                      +.  |+-.-+|.+||....++.                        .....|+.+|.-.-.+.++++     ++.|+++.
T Consensus       123 k~~gG~GGiIvNmsSv~GL~P~------------------------p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~  178 (261)
T KOG4169|consen  123 KKQGGKGGIIVNMSSVAGLDPM------------------------PVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFN  178 (261)
T ss_pred             hhcCCCCcEEEEeccccccCcc------------------------ccchhhhhcccceeeeehhhhhhhhHhhcCEEEE
Confidence            33  334579999997533221                        223479999987666655533     34599999


Q ss_pred             EEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEec
Q 035985          148 TVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCA  223 (293)
Q Consensus       148 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~  223 (293)
                      .+.|+.+--.            +...+......+...+-..+.=....--...+++..++.+++.+..+.+|.++.
T Consensus       179 avCPG~t~t~------------l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~~NGaiw~v~~  242 (261)
T KOG4169|consen  179 AVCPGFTRTD------------LAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEYPKNGAIWKVDS  242 (261)
T ss_pred             EECCCcchHH------------HHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhhccCCcEEEEec
Confidence            9988854211            111111110000000000000001122347789999999999977777887643

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.23  E-value=5.3e-06  Score=85.74  Aligned_cols=117  Identities=21%  Similarity=0.219  Sum_probs=91.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcCCCccEE
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKTKTVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   82 (293)
                      ..+.++.+|++|.+++.+++.      ++|+|||.||.....      ..+.. ..++.|+.|+.++++++.... .++|
T Consensus      2094 ~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~-~v~~~nv~G~~~Ll~al~~~~-~~~I 2171 (2582)
T TIGR02813      2094 ASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFN-AVYGTKVDGLLSLLAALNAEN-IKLL 2171 (2582)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHhC-CCeE
Confidence            468899999999998887764      489999999975321      11233 689999999999999998766 6789


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-CceEEEEccCCccCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-NIDLITVIPSLMSGP  157 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~  157 (293)
                      |++||....++...                        ...|+.+|.....+.+.++.++ +++++.+.++.+-|.
T Consensus      2172 V~~SSvag~~G~~g------------------------qs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2172 ALFSSAAGFYGNTG------------------------QSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             EEEechhhcCCCCC------------------------cHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            99999876655432                        2479999999998888887765 688899998876543

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK08303 short chain dehydrogenase; Provisional

Probab=98.20  E-value=1.3e-05  Score=67.02  Aligned_cols=118  Identities=16%  Similarity=0.073  Sum_probs=80.4

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEec-ccCC-----CC-----CCCccccchhHHHHHHHHHHHHHhc--
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVA-TPVN-----FS-----SDDPETDMIKPAIQGVVNVLKACTK--   75 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a-~~~~-----~~-----~~~~~~~~~~~n~~~~~~l~~~~~~--   75 (293)
                      ++.++++|++|+++++++++       .+|++||+| +...     ..     ..+.. +.++.|+.+...+++++..  
T Consensus        68 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~lp~m  146 (305)
T PRK08303         68 RGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGL-RMLRLAIDTHLITSHFALPLL  146 (305)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHH-HHHHHhhHHHHHHHHHHHHHh
Confidence            57789999999998877653       589999999 6321     00     01112 4567788888777766643  


Q ss_pred             --CCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEc
Q 035985           76 --TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVI  150 (293)
Q Consensus        76 --~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR  150 (293)
                        .+ -.++|++||....+...                     .......|+.+|.....+.+.++.+.   |+++..|.
T Consensus       147 ~~~~-~g~IV~isS~~~~~~~~---------------------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~  204 (305)
T PRK08303        147 IRRP-GGLVVEITDGTAEYNAT---------------------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALT  204 (305)
T ss_pred             hhCC-CcEEEEECCccccccCc---------------------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEec
Confidence              22 35899999864222110                     00112469999999999998887754   79999999


Q ss_pred             cCCccC
Q 035985          151 PSLMSG  156 (293)
Q Consensus       151 ~~~v~G  156 (293)
                      |+.+-.
T Consensus       205 PG~v~T  210 (305)
T PRK08303        205 PGWLRS  210 (305)
T ss_pred             CCcccc
Confidence            987744

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.18  E-value=9.6e-06  Score=65.43  Aligned_cols=150  Identities=18%  Similarity=0.127  Sum_probs=102.2

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC----C-CCCccccchhHHHHHHHHHHH----HHhcCCCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF----S-SDDPETDMIKPAIQGVVNVLK----ACTKTKTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~----~-~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~   79 (293)
                      .+....+|+++++++.+..+       ++|++||.||....    . .++..+.++++|+.+.....+    ...+.. -
T Consensus        87 ~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~  165 (300)
T KOG1201|consen   87 EAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-N  165 (300)
T ss_pred             ceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-C
Confidence            68899999999997776653       68999999998751    1 111223788899888766554    444544 4


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh------CCceEEEEccCC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE------NNIDLITVIPSL  153 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~------~~~~~~ilR~~~  153 (293)
                      .++|.++|.....+.+.                        ...|+.||..+..+.+.+..+      .|++.+.+-|+.
T Consensus       166 GHIV~IaS~aG~~g~~g------------------------l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~  221 (300)
T KOG1201|consen  166 GHIVTIASVAGLFGPAG------------------------LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYF  221 (300)
T ss_pred             ceEEEehhhhcccCCcc------------------------chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeee
Confidence            69999999875543332                        348999999998777776533      268888888876


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA  215 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~  215 (293)
                      += .+.-              .+ ....         ....+.+..+.+|+.++.++..+..
T Consensus       222 i~-Tgmf--------------~~-~~~~---------~~l~P~L~p~~va~~Iv~ai~~n~~  258 (300)
T KOG1201|consen  222 IN-TGMF--------------DG-ATPF---------PTLAPLLEPEYVAKRIVEAILTNQA  258 (300)
T ss_pred             cc-cccc--------------CC-CCCC---------ccccCCCCHHHHHHHHHHHHHcCCc
Confidence            53 2110              11 1111         1136778899999999998876654

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=98.17  E-value=1.6e-05  Score=59.83  Aligned_cols=155  Identities=21%  Similarity=0.256  Sum_probs=98.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC-----
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT-----   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~-----   76 (293)
                      .+...+.+|++++.++...++       .++++++|||...+.      .+++. +....|+.|+..+.+++.+.     
T Consensus        62 ~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd-~vi~vNL~gvfl~tqaa~r~~~~~~  140 (256)
T KOG1200|consen   62 GDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWD-SVIAVNLTGVFLVTQAAVRAMVMNQ  140 (256)
T ss_pred             CccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHH-HHHHhhchhhHHHHHHHHHHHHHhc
Confidence            456778999999987776554       589999999987532      23444 78889999998888877644     


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHH----HHHHHHHHHhCCceEEEEccC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLA----ERAACKFAQENNIDLITVIPS  152 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~----E~~~~~~~~~~~~~~~ilR~~  152 (293)
                      ++.-++|.+||.-..-++..                        .+.|+.+|.-.    ..+.++.+++ ++++.++-|+
T Consensus       141 ~~~~sIiNvsSIVGkiGN~G------------------------QtnYAAsK~GvIgftktaArEla~k-nIrvN~VlPG  195 (256)
T KOG1200|consen  141 QQGLSIINVSSIVGKIGNFG------------------------QTNYAASKGGVIGFTKTAARELARK-NIRVNVVLPG  195 (256)
T ss_pred             CCCceEEeehhhhccccccc------------------------chhhhhhcCceeeeeHHHHHHHhhc-CceEeEeccc
Confidence            11248999999732222222                        23677776543    2333444444 8999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK  212 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~  212 (293)
                      .|-.|--..    ..+.+...+.+..+ +            .-+-..+|+|..+..+...
T Consensus       196 FI~tpMT~~----mp~~v~~ki~~~iP-m------------gr~G~~EevA~~V~fLAS~  238 (256)
T KOG1200|consen  196 FIATPMTEA----MPPKVLDKILGMIP-M------------GRLGEAEEVANLVLFLASD  238 (256)
T ss_pred             cccChhhhh----cCHHHHHHHHccCC-c------------cccCCHHHHHHHHHHHhcc
Confidence            886653221    11223333333221 1            2234488999988887743

>PRK08862 short chain dehydrogenase; Provisional

Probab=98.15  E-value=2e-05  Score=63.06  Aligned_cols=116  Identities=16%  Similarity=0.184  Sum_probs=78.2

Q ss_pred             CCeEEEecCCCCCcchhhhh-------c-CCCEEEEecccCCCC---CCCcc---ccchhHHHHHHHHHHHHH----hcC
Q 035985           15 GELKIFRADLTDEASFDAPI-------S-RSDIVFHVATPVNFS---SDDPE---TDMIKPAIQGVVNVLKAC----TKT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~-------~-~~d~Vih~a~~~~~~---~~~~~---~~~~~~n~~~~~~l~~~~----~~~   76 (293)
                      .++..+.+|++|++++.+++       . .+|++||+||.....   .+.+.   .+.+..|+.+...+++.+    ++.
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~  133 (227)
T PRK08862         54 DNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKR  133 (227)
T ss_pred             CCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            35778889999999887665       3 689999999753211   11111   134556766666555443    333


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                      ++-..+|++||... .  +                        +...|+.+|...+.+.+.++.+   .++++..+.|+.
T Consensus       134 ~~~g~Iv~isS~~~-~--~------------------------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~  186 (227)
T PRK08862        134 NKKGVIVNVISHDD-H--Q------------------------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSI  186 (227)
T ss_pred             CCCceEEEEecCCC-C--C------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCc
Confidence            21358999998531 1  0                        1247999999999999988775   479999999998


Q ss_pred             ccCC
Q 035985          154 MSGP  157 (293)
Q Consensus       154 v~G~  157 (293)
                      +-.+
T Consensus       187 i~t~  190 (227)
T PRK08862        187 FSAN  190 (227)
T ss_pred             CcCC
Confidence            7655

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.13  E-value=6.2e-06  Score=68.85  Aligned_cols=127  Identities=12%  Similarity=0.073  Sum_probs=90.1

Q ss_pred             EecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccccCCC
Q 035985           20 FRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVT   99 (293)
Q Consensus        20 v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~   99 (293)
                      ...+.+|+.++.+.++++|+||++||.......... +.+..|+..+.++++++++++ ++++|+++|-.+ ....... 
T Consensus        60 ~v~~~td~~~~~~~l~gaDvVVitaG~~~~~~~tR~-dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPv-dv~~~~~-  135 (321)
T PTZ00325         60 KVTGYADGELWEKALRGADLVLICAGVPRKPGMTRD-DLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPV-NSTVPIA-  135 (321)
T ss_pred             eEEEecCCCchHHHhCCCCEEEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcH-HHHHHHH-
Confidence            345666666667889999999999998654333344 789999999999999999999 999999999752 2111000 


Q ss_pred             CccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCC
Q 035985          100 GLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLT  160 (293)
Q Consensus       100 ~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~  160 (293)
                      ...+.+..         ..+|...||.+-+..-++-...++..++....++ ++|+|.+.+
T Consensus       136 ~~~~~~~s---------g~p~~~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        136 AETLKKAG---------VYDPRKLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             Hhhhhhcc---------CCChhheeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            00011222         4456667887767777777777888788887777 778898765

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=98.06  E-value=7.9e-05  Score=60.98  Aligned_cols=164  Identities=16%  Similarity=0.211  Sum_probs=102.4

Q ss_pred             CCeEEEecCCCCCcchhhhh--------cCCCEEEEecccCCCC-------CCCccccchhHHHHH-HHHHHHHHhcC--
Q 035985           15 GELKIFRADLTDEASFDAPI--------SRSDIVFHVATPVNFS-------SDDPETDMIKPAIQG-VVNVLKACTKT--   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~--------~~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~-~~~l~~~~~~~--   76 (293)
                      +++..+.+|+++.+.+++++        .++|++|+.||.....       .+.++ ..+++|+.| ...+..++...  
T Consensus        60 ~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d-~~~~~Nl~G~~~~~~~~a~~~~~  138 (270)
T KOG0725|consen   60 GKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFD-KIMATNLRGSAFCLKQAARPMLK  138 (270)
T ss_pred             CeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHH-HHHhhhchhHHHHHHHHHHHHHH
Confidence            46899999999987666554        3589999999976422       12233 778889995 55555555422  


Q ss_pred             -CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccC
Q 035985           77 -KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPS  152 (293)
Q Consensus        77 -~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~  152 (293)
                       ++-..++++||...+....                       .+...|+.+|...+++.+.++.+.   |+++..+-|+
T Consensus       139 ~~~gg~I~~~ss~~~~~~~~-----------------------~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG  195 (270)
T KOG0725|consen  139 KSKGGSIVNISSVAGVGPGP-----------------------GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPG  195 (270)
T ss_pred             hcCCceEEEEeccccccCCC-----------------------CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecC
Confidence             1145788888875322111                       111589999999999999987654   8999999999


Q ss_pred             CccCCCCCCCCC-ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          153 LMSGPSLTPDIP-SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       153 ~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .|..+....... .....+.... .....++.          -.+.-.+|++..+..++...
T Consensus       196 ~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~p~----------gr~g~~~eva~~~~fla~~~  246 (270)
T KOG0725|consen  196 LVKTSLRAAGLDDGEMEEFKEAT-DSKGAVPL----------GRVGTPEEVAEAAAFLASDD  246 (270)
T ss_pred             cEeCCccccccccchhhHHhhhh-cccccccc----------CCccCHHHHHHhHHhhcCcc
Confidence            888876111110 1111111110 01111111          12455899999988887764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.03  E-value=9.3e-05  Score=61.69  Aligned_cols=134  Identities=16%  Similarity=0.120  Sum_probs=91.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC---CCccccchhHHHHHHHHHHHH----HhcCCCcc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS---DDPETDMIKPAIQGVVNVLKA----CTKTKTVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~---~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~   80 (293)
                      .++.++++|+++.+++.+..+       ..|+.|+.||......   .+..+..+.+|..|...|.+.    +++.. ..
T Consensus        86 ~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~  164 (314)
T KOG1208|consen   86 QKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PS  164 (314)
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CC
Confidence            578889999999998877653       5799999999875221   232347888998887666554    44544 37


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccC-CCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSE-KPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~-~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~  157 (293)
                      |+|++||.. . +...+- .....|..         . ......|+.||.....+..+++++.  |+.+..+.|+.+..+
T Consensus       165 RIV~vsS~~-~-~~~~~~-~~l~~~~~---------~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~  232 (314)
T KOG1208|consen  165 RIVNVSSIL-G-GGKIDL-KDLSGEKA---------KLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTT  232 (314)
T ss_pred             CEEEEcCcc-c-cCccch-hhccchhc---------cCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccc
Confidence            999999975 2 111100 01111221         1 1222359999999999999998876  699999999999887


Q ss_pred             CCCC
Q 035985          158 SLTP  161 (293)
Q Consensus       158 ~~~~  161 (293)
                      .-..
T Consensus       233 ~l~r  236 (314)
T KOG1208|consen  233 GLSR  236 (314)
T ss_pred             ceec
Confidence            5433

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.00  E-value=3e-05  Score=59.92  Aligned_cols=122  Identities=16%  Similarity=0.149  Sum_probs=82.1

Q ss_pred             CCCCeEEEecCCCCCcchhhhhc---------CCCEEEEecccCC-CCC-----CCccccchhHHHHHHHHHHHHH----
Q 035985           13 ELGELKIFRADLTDEASFDAPIS---------RSDIVFHVATPVN-FSS-----DDPETDMIKPAIQGVVNVLKAC----   73 (293)
Q Consensus        13 ~~~~v~~v~~Dl~d~~~~~~~~~---------~~d~Vih~a~~~~-~~~-----~~~~~~~~~~n~~~~~~l~~~~----   73 (293)
                      .++++++++.|+++.+++.++++         +.+++++.||... +..     +...-+.+++|+.++..+.++.    
T Consensus        52 ~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLL  131 (249)
T KOG1611|consen   52 SDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLL  131 (249)
T ss_pred             cCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHH
Confidence            34899999999999988777653         6799999999753 111     1111267888888776665543    


Q ss_pred             hcCC----------CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-
Q 035985           74 TKTK----------TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-  142 (293)
Q Consensus        74 ~~~~----------~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-  142 (293)
                      ++..          ....+|++||.+.-  ...                   ....+...|..||.+.-.+.+.++-+. 
T Consensus       132 kkaas~~~gd~~s~~raaIinisS~~~s--~~~-------------------~~~~~~~AYrmSKaAlN~f~ksls~dL~  190 (249)
T KOG1611|consen  132 KKAASKVSGDGLSVSRAAIINISSSAGS--IGG-------------------FRPGGLSAYRMSKAALNMFAKSLSVDLK  190 (249)
T ss_pred             HHHhhcccCCcccccceeEEEeeccccc--cCC-------------------CCCcchhhhHhhHHHHHHHHHHhhhhhc
Confidence            2221          01268889987521  110                   033456799999999999998887553 


Q ss_pred             --CceEEEEccCCcc
Q 035985          143 --NIDLITVIPSLMS  155 (293)
Q Consensus       143 --~~~~~ilR~~~v~  155 (293)
                        ++-++.+.|++|-
T Consensus       191 ~~~ilv~sihPGwV~  205 (249)
T KOG1611|consen  191 DDHILVVSIHPGWVQ  205 (249)
T ss_pred             CCcEEEEEecCCeEE
Confidence              5667788888774

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=97.92  E-value=8.1e-05  Score=62.04  Aligned_cols=137  Identities=18%  Similarity=0.076  Sum_probs=85.4

Q ss_pred             CCCEEEEecccCC--------CCCCCccccchhHHHHHHHHHHHHHhcC--CCccEEEEecccchhcccccCCCCccccC
Q 035985           36 RSDIVFHVATPVN--------FSSDDPETDMIKPAIQGVVNVLKACTKT--KTVKRVILTSSAAAVSINAQNVTGLVMDE  105 (293)
Q Consensus        36 ~~d~Vih~a~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~E  105 (293)
                      .+|++||+||...        .+..+.. ..+++|+.+...+++++...  . -.++|++||.....+.           
T Consensus       120 ~iDiLVnNAG~~~~~~~~~~~~~~e~~~-~~~~vN~~~~~~l~~~~~p~m~~-~G~II~isS~a~~~~~-----------  186 (303)
T PLN02730        120 SIDILVHSLANGPEVTKPLLETSRKGYL-AAISASSYSFVSLLQHFGPIMNP-GGASISLTYIASERII-----------  186 (303)
T ss_pred             CCCEEEECCCccccCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhc-CCEEEEEechhhcCCC-----------
Confidence            5899999996421        1111223 77889999998888776543  1 1589999987532111           


Q ss_pred             CCCCchhhhccCCCCC-chhHHHHHHHHHHHHHHHHh----CCceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCccc
Q 035985          106 KNWTDVEFLSSEKPPT-WGYAASKTLAERAACKFAQE----NNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL  180 (293)
Q Consensus       106 ~~~~~~~~~~~~~~p~-~~Y~~~K~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  180 (293)
                                   ... ..|+.+|...+.+.+.++.+    .|+++..|-|+.+-.+.... ... .......... .. 
T Consensus       187 -------------p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~-~~~-~~~~~~~~~~-~~-  249 (303)
T PLN02730        187 -------------PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA-IGF-IDDMIEYSYA-NA-  249 (303)
T ss_pred             -------------CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc-ccc-cHHHHHHHHh-cC-
Confidence                         112 26999999999999998875    36899999999886543211 100 0111111111 10 


Q ss_pred             ccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       181 ~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                       +.          .-+...+|++.+++.++...
T Consensus       250 -pl----------~r~~~peevA~~~~fLaS~~  271 (303)
T PLN02730        250 -PL----------QKELTADEVGNAAAFLASPL  271 (303)
T ss_pred             -CC----------CCCcCHHHHHHHHHHHhCcc
Confidence             10          12456899999999998743

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.90  E-value=0.00055  Score=58.46  Aligned_cols=163  Identities=19%  Similarity=0.095  Sum_probs=88.9

Q ss_pred             CCeEEEecCCCCCcc-hhhhhc----CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccc
Q 035985           15 GELKIFRADLTDEAS-FDAPIS----RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAA   89 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~-~~~~~~----~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~   89 (293)
                      .+...+..|.....+ +..+..    ...+++-+++-..... +.. .-..+.-.|++|+++||+.+| ++|||++||++
T Consensus       127 ~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~~~~ggrp~~e-d~~-~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~  203 (411)
T KOG1203|consen  127 LGLQNVEADVVTAIDILKKLVEAVPKGVVIVIKGAGGRPEEE-DIV-TPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIG  203 (411)
T ss_pred             cccceeeeccccccchhhhhhhhccccceeEEecccCCCCcc-cCC-CcceecHHHHHHHHHHHHHhC-CceEEEEEeec
Confidence            345556655544433 333332    2345555554433221 112 335677889999999999999 99999998865


Q ss_pred             hhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHH
Q 035985           90 AVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVAL  169 (293)
Q Consensus        90 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~  169 (293)
                      .   ...       +...|.        ......+-.+|..+|.++    ++.|++++|||++...-.........    
T Consensus       204 ~---~~~-------~~~~~~--------~~~~~~~~~~k~~~e~~~----~~Sgl~ytiIR~g~~~~~~~~~~~~~----  257 (411)
T KOG1203|consen  204 G---TKF-------NQPPNI--------LLLNGLVLKAKLKAEKFL----QDSGLPYTIIRPGGLEQDTGGQREVV----  257 (411)
T ss_pred             C---ccc-------CCCchh--------hhhhhhhhHHHHhHHHHH----HhcCCCcEEEeccccccCCCCcceec----
Confidence            2   111       111100        000113346777777665    45699999999997654322111000    


Q ss_pred             HHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC
Q 035985          170 AATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG  217 (293)
Q Consensus       170 ~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~  217 (293)
                          +.+.......       ++.--.+.-.|+|+..+.++.++....
T Consensus       258 ----~~~~~~~~~~-------~~~~~~i~r~~vael~~~all~~~~~~  294 (411)
T KOG1203|consen  258 ----VDDEKELLTV-------DGGAYSISRLDVAELVAKALLNEAATF  294 (411)
T ss_pred             ----ccCccccccc-------cccceeeehhhHHHHHHHHHhhhhhcc
Confidence                0111111111       111125678899999999988776543

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.88  E-value=3.9e-05  Score=62.26  Aligned_cols=156  Identities=21%  Similarity=0.219  Sum_probs=102.0

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCC------CCCCCccccchhHHHHHHHHHHHHHhcC----CC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVN------FSSDDPETDMIKPAIQGVVNVLKACTKT----KT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~   78 (293)
                      .|.+..+|+.|.+++..+++       .+|.+|+|||..-      .+.+.. +..+++|..++.+++.++...    .+
T Consensus        85 ~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v-~~~m~vNylgt~~v~~~~~~~mk~~~~  163 (331)
T KOG1210|consen   85 DVSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVV-EKLMDVNYLGTVNVAKAAARAMKKREH  163 (331)
T ss_pred             eeeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHH-HHHHHhhhhhhHHHHHHHHHHhhcccc
Confidence            36688899999988777664       3799999999752      111122 367889999999998877533    21


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..+++.+||..+.++-.                        ..+.|..+|.....+.....++   +++.++..-|+.+-
T Consensus       164 ~g~I~~vsS~~a~~~i~------------------------GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~  219 (331)
T KOG1210|consen  164 LGRIILVSSQLAMLGIY------------------------GYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTL  219 (331)
T ss_pred             CcEEEEehhhhhhcCcc------------------------cccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCC
Confidence            33899999987665433                        2347778887777666665544   38899999999988


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .|+-.... ..-+...+++.                +.-+.+..+++|.+++.-+...
T Consensus       220 tpGfE~En-~tkP~~t~ii~----------------g~ss~~~~e~~a~~~~~~~~rg  260 (331)
T KOG1210|consen  220 TPGFEREN-KTKPEETKIIE----------------GGSSVIKCEEMAKAIVKGMKRG  260 (331)
T ss_pred             CCcccccc-ccCchheeeec----------------CCCCCcCHHHHHHHHHhHHhhc
Confidence            88644321 11111111111                1233467889999988877654

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.87  E-value=6.3e-05  Score=57.25  Aligned_cols=118  Identities=15%  Similarity=0.182  Sum_probs=83.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCC---CC-CCCc---cccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVN---FS-SDDP---ETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~---~~-~~~~---~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      +.+.-.++|+.|.++++++++       ..+++||+||...   .. .++.   .++....|+.++..|..+..    +.
T Consensus        50 p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q  129 (245)
T COG3967          50 PEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ  129 (245)
T ss_pred             cchheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC
Confidence            688999999999997777653       5799999999863   11 1111   12556788888888776654    33


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + -..+|.+||.-+.-+                        ......|+.+|+....+...+.++.   ++++.=+-|+.
T Consensus       130 ~-~a~IInVSSGLafvP------------------------m~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~  184 (245)
T COG3967         130 P-EATIINVSSGLAFVP------------------------MASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPL  184 (245)
T ss_pred             C-CceEEEeccccccCc------------------------ccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCc
Confidence            3 467999999753221                        1122379999999998887777654   67888888888


Q ss_pred             ccCC
Q 035985          154 MSGP  157 (293)
Q Consensus       154 v~G~  157 (293)
                      |--+
T Consensus       185 V~t~  188 (245)
T COG3967         185 VDTT  188 (245)
T ss_pred             eecC
Confidence            7654

>PLN00106 malate dehydrogenase

Probab=97.82  E-value=1.8e-05  Score=66.21  Aligned_cols=122  Identities=14%  Similarity=0.088  Sum_probs=86.7

Q ss_pred             CCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccccCCCCcc
Q 035985           23 DLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLV  102 (293)
Q Consensus        23 Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  102 (293)
                      ++.+..++.+.++++|+|||+||.......... +.+..|...++++++.+++++ .+.+|+++|--+-...+...  ..
T Consensus        73 ~~~~~~d~~~~l~~aDiVVitAG~~~~~g~~R~-dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t--~~  148 (323)
T PLN00106         73 GFLGDDQLGDALKGADLVIIPAGVPRKPGMTRD-DLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAA--EV  148 (323)
T ss_pred             EEeCCCCHHHHcCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHH--HH
Confidence            444455677889999999999998754333444 889999999999999999999 88999988754210000000  01


Q ss_pred             ccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCC
Q 035985          103 MDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPS  158 (293)
Q Consensus       103 ~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~  158 (293)
                      +...+         ..+|...||.+++..+++-..+++..+++...++-. |+|.+
T Consensus       149 ~~~~s---------~~p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~~-ViGeH  194 (323)
T PLN00106        149 LKKAG---------VYDPKKLFGVTTLDVVRANTFVAEKKGLDPADVDVP-VVGGH  194 (323)
T ss_pred             HHHcC---------CCCcceEEEEecchHHHHHHHHHHHhCCChhheEEE-EEEeC
Confidence            11222         445667899999999999999999989887777544 56655

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=97.59  E-value=0.00042  Score=56.24  Aligned_cols=115  Identities=24%  Similarity=0.247  Sum_probs=80.7

Q ss_pred             CeEEEecCCCC-Ccchhhhhc-------CCCEEEEecccCCC--CC-----CCccccchhHHHHHHHHHHHHHhcCCCcc
Q 035985           16 ELKIFRADLTD-EASFDAPIS-------RSDIVFHVATPVNF--SS-----DDPETDMIKPAIQGVVNVLKACTKTKTVK   80 (293)
Q Consensus        16 ~v~~v~~Dl~d-~~~~~~~~~-------~~d~Vih~a~~~~~--~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~   80 (293)
                      .+.+...|+++ .+++..+++       ++|++||+||....  ..     +.. +..+..|+.+...+.+++...-.-+
T Consensus        58 ~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~~~n~~g~~~~~~~~~~~~~~~  136 (251)
T COG1028          58 RAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDW-DRVIDVNLLGAFLLTRAALPLMKKQ  136 (251)
T ss_pred             cEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHH-HHHHHHhHHHHHHHHHHHHHhhhhC
Confidence            57778899998 776665553       48999999997532  11     122 3788899998888887444332112


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ++|++||.... ....                       ....|+.+|...+.+.+.++.+   .|+.++.+-|+.+-
T Consensus       137 ~Iv~isS~~~~-~~~~-----------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         137 RIVNISSVAGL-GGPP-----------------------GQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             eEEEECCchhc-CCCC-----------------------CcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence            99999997532 1110                       0258999999999998888754   47999999999544

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.37  E-value=0.00085  Score=55.93  Aligned_cols=138  Identities=14%  Similarity=0.032  Sum_probs=84.7

Q ss_pred             CCCEEEEecccCCC---C-----CCCccccchhHHHHHHHHHHHHHhcC-CCccEEEEecccchhcccccCCCCccccCC
Q 035985           36 RSDIVFHVATPVNF---S-----SDDPETDMIKPAIQGVVNVLKACTKT-KTVKRVILTSSAAAVSINAQNVTGLVMDEK  106 (293)
Q Consensus        36 ~~d~Vih~a~~~~~---~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~  106 (293)
                      ++|++||+||....   .     .++.. ..+++|+.+...+++++... ..-.++|++||.....+.+           
T Consensus       119 ~lDvLVnNAG~~~~~~~~~~~~~~e~~~-~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~p-----------  186 (299)
T PRK06300        119 HIDILVHSLANSPEISKPLLETSRKGYL-AALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAVP-----------  186 (299)
T ss_pred             CCcEEEECCCcCcccCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcCC-----------
Confidence            58999999975321   1     11223 67889999999998877643 1124788888865321111           


Q ss_pred             CCCchhhhccCCCCC-chhHHHHHHHHHHHHHHHHh----CCceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccc
Q 035985          107 NWTDVEFLSSEKPPT-WGYAASKTLAERAACKFAQE----NNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLL  181 (293)
Q Consensus       107 ~~~~~~~~~~~~~p~-~~Y~~~K~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  181 (293)
                                   .. ..|+.+|...+.+.+.++.+    +|+++..|.|+.+-.+.... .. ............ .  
T Consensus       187 -------------~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~-~~-~~~~~~~~~~~~-~--  248 (299)
T PRK06300        187 -------------GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKA-IG-FIERMVDYYQDW-A--  248 (299)
T ss_pred             -------------CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhc-cc-ccHHHHHHHHhc-C--
Confidence                         11 26999999999999988765    37999999999876543210 00 001111111111 0  


Q ss_pred             cccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          182 NGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       182 ~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +.          ..+...+|++.+++.++...
T Consensus       249 p~----------~r~~~peevA~~v~~L~s~~  270 (299)
T PRK06300        249 PL----------PEPMEAEQVGAAAAFLVSPL  270 (299)
T ss_pred             CC----------CCCcCHHHHHHHHHHHhCcc
Confidence            11          12356899999999988753

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.35  E-value=0.0004  Score=53.87  Aligned_cols=95  Identities=19%  Similarity=0.196  Sum_probs=66.4

Q ss_pred             CCCEEEEecccCCCC------C--CCccccchhHHHHHHHHHHHHHhcC----CCccEEEEecccchhcccccCCCCccc
Q 035985           36 RSDIVFHVATPVNFS------S--DDPETDMIKPAIQGVVNVLKACTKT----KTVKRVILTSSAAAVSINAQNVTGLVM  103 (293)
Q Consensus        36 ~~d~Vih~a~~~~~~------~--~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~~  103 (293)
                      +-|+|||.||.....      .  .+....++..|+.+...+...+...    +-.+-+|++||..++-           
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~-----------  150 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR-----------  150 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc-----------
Confidence            469999999976311      1  1112378889988887776655432    1136799999987432           


Q ss_pred             cCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCc
Q 035985          104 DEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLM  154 (293)
Q Consensus       104 ~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v  154 (293)
                                   +......|+.+|++.+.+++.++.+.  ++.++.++|+.+
T Consensus       151 -------------p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvv  190 (253)
T KOG1204|consen  151 -------------PFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVV  190 (253)
T ss_pred             -------------cccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcc
Confidence                         11223489999999999999987654  788889999865

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.20  E-value=0.00039  Score=53.37  Aligned_cols=116  Identities=21%  Similarity=0.213  Sum_probs=80.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc--------CCCEEEEecccCC-CC-CCC---ccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS--------RSDIVFHVATPVN-FS-SDD---PETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--------~~d~Vih~a~~~~-~~-~~~---~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++...+.|+++++.+.++..        ..|+++|.||... .+ .+.   ..+..+++|+-|..++.++..    +.+
T Consensus        52 ~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK  131 (289)
T KOG1209|consen   52 FGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK  131 (289)
T ss_pred             hCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc
Confidence            478899999999998876643        4799999999753 11 111   113778889888777666554    333


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                        ..+|+++|...+-+                        ....+.|..+|++...+.+.+.-+   .|++++.+-++.|
T Consensus       132 --GtIVnvgSl~~~vp------------------------fpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv  185 (289)
T KOG1209|consen  132 --GTIVNVGSLAGVVP------------------------FPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGV  185 (289)
T ss_pred             --ceEEEecceeEEec------------------------cchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccce
Confidence              58999999864321                        123358999999999888776533   3788887777765


Q ss_pred             cC
Q 035985          155 SG  156 (293)
Q Consensus       155 ~G  156 (293)
                      --
T Consensus       186 ~T  187 (289)
T KOG1209|consen  186 AT  187 (289)
T ss_pred             ec
Confidence            43

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.08  E-value=0.00025  Score=52.35  Aligned_cols=162  Identities=21%  Similarity=0.234  Sum_probs=96.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCC------------CCCCCccccchhHHHHHHHHHHHHHh-
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVN------------FSSDDPETDMIKPAIQGVVNVLKACT-   74 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~------------~~~~~~~~~~~~~n~~~~~~l~~~~~-   74 (293)
                      .++.+...|++..+++..++.       ..|+.++|||...            ...++.. ...++|+.|+.|+++... 
T Consensus        55 ~~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfq-rvidvn~~gtfnvirl~ag  133 (260)
T KOG1199|consen   55 GKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQ-RVIDVNVLGTFNVIRLGAG  133 (260)
T ss_pred             CceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhh-heeeeeeeeeeeeeeehhh
Confidence            478999999999998887764       5799999998642            1112233 567789999999987553 


Q ss_pred             --------cCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---C
Q 035985           75 --------KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---N  143 (293)
Q Consensus        75 --------~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~  143 (293)
                              +.|.-..+|.+.|..++-++..+                        ..|..+|...-.+..-.++..   |
T Consensus       134 lmg~nepdq~gqrgviintasvaafdgq~gq------------------------aaysaskgaivgmtlpiardla~~g  189 (260)
T KOG1199|consen  134 LMGENEPDQNGQRGVIINTASVAAFDGQTGQ------------------------AAYSASKGAIVGMTLPIARDLAGDG  189 (260)
T ss_pred             hhcCCCCCCCCcceEEEeeceeeeecCccch------------------------hhhhcccCceEeeechhhhhcccCc
Confidence                    11212346777776644443322                        368788776554444444332   8


Q ss_pred             ceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC
Q 035985          144 IDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG  217 (293)
Q Consensus       144 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~  217 (293)
                      ++++.+-|+.+ +...-    ...+.-++......++++..           .-|..+.+..+-.+++++.-+|
T Consensus       190 ir~~tiapglf-~tpll----sslpekv~~fla~~ipfpsr-----------lg~p~eyahlvqaiienp~lng  247 (260)
T KOG1199|consen  190 IRFNTIAPGLF-DTPLL----SSLPEKVKSFLAQLIPFPSR-----------LGHPHEYAHLVQAIIENPYLNG  247 (260)
T ss_pred             eEEEeeccccc-CChhh----hhhhHHHHHHHHHhCCCchh-----------cCChHHHHHHHHHHHhCcccCC
Confidence            99998888754 33211    11122122222222223221           2346667778888888887555

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.95  E-value=0.0021  Score=54.09  Aligned_cols=114  Identities=13%  Similarity=0.135  Sum_probs=81.3

Q ss_pred             hhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCC-ccEEEEecccchhcccccCCCCccccCCCCC
Q 035985           31 DAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKT-VKRVILTSSAAAVSINAQNVTGLVMDEKNWT  109 (293)
Q Consensus        31 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  109 (293)
                      .+.++++|+||.+||.......+-. +.+..|+.-.+.+.....+..+ -..+|.+|--.-+...       .+...+  
T Consensus        73 ~~~~~daDivvitaG~~~k~g~tR~-dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~-------~~~k~s--  142 (322)
T cd01338          73 NVAFKDADWALLVGAKPRGPGMERA-DLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNAL-------IAMKNA--  142 (322)
T ss_pred             HHHhCCCCEEEEeCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHH-------HHHHHc--
Confidence            4667799999999998654434444 7899999999999999988872 4456665532100000       000110  


Q ss_pred             chhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCC
Q 035985          110 DVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLT  160 (293)
Q Consensus       110 ~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~  160 (293)
                            ...++...|+.+++..+++...+++..+++...+|..+|||++..
T Consensus       143 ------g~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~  187 (322)
T cd01338         143 ------PDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP  187 (322)
T ss_pred             ------CCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence                  013345689999999999999999999999999999999999854

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.72  E-value=0.0005  Score=51.00  Aligned_cols=159  Identities=14%  Similarity=0.112  Sum_probs=100.5

Q ss_pred             CeEEEecCCCCCcchhhhhc---CCCEEEEecccCCC------CCCCccccchhHHHHHHHHHHHHHhc----CCCccEE
Q 035985           16 ELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNF------SSDDPETDMIKPAIQGVVNVLKACTK----TKTVKRV   82 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~   82 (293)
                      .+.++++|+++-+.+.+++-   -+|..++.||..-.      ..++.+ ..|+.|+.+..++.+...+    .+....+
T Consensus        54 ~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fD-r~F~VNvravi~v~Q~var~lv~R~~~GaI  132 (245)
T KOG1207|consen   54 LIIPIVGDLSAWEALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFD-RTFAVNVRAVILVAQLVARNLVDRQIKGAI  132 (245)
T ss_pred             ceeeeEecccHHHHHHHhhcccCchhhhhccchhhhcchHHHHhHHhhc-ceeeeeeeeeeeHHHHHHHhhhhccCCceE
Confidence            38999999999887777765   46999999986521      112334 6788898888877776332    2213469


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSL  159 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~  159 (293)
                      |.+||.+..         .++               .-.+.|+.+|.+...+.+.++-+.   ++++..+-|..+.-.-.
T Consensus       133 VNvSSqas~---------R~~---------------~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG  188 (245)
T KOG1207|consen  133 VNVSSQASI---------RPL---------------DNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMG  188 (245)
T ss_pred             EEecchhcc---------ccc---------------CCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEeccc
Confidence            999997532         112               233589999999998887777654   57888888887765422


Q ss_pred             CCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          160 TPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      ......  +.-.+.+...   ++.          --|.-++.++.++..++....
T Consensus       189 ~dnWSD--P~K~k~mL~r---iPl----------~rFaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  189 RDNWSD--PDKKKKMLDR---IPL----------KRFAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             ccccCC--chhccchhhh---Cch----------hhhhHHHHHHhhheeeeecCc
Confidence            211100  0000000000   111          236779999999988887643

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=96.41  E-value=0.01  Score=50.01  Aligned_cols=99  Identities=11%  Similarity=0.103  Sum_probs=61.6

Q ss_pred             CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHh----cCCCccEEEEecccchhcccccCCCCccccCCCCCch
Q 035985           36 RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACT----KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDV  111 (293)
Q Consensus        36 ~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~  111 (293)
                      +++.+|.+-|..+............+.-.-+..|+++..    +.+ .+++|.++|....                    
T Consensus       203 ~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~-~K~~vIvTSfn~~--------------------  261 (410)
T PF08732_consen  203 DIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTG-NKKLVIVTSFNNN--------------------  261 (410)
T ss_pred             hhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCC-CceEEEEEecCcc--------------------
Confidence            456777777766533221110111222222344555544    666 8999999986521                    


Q ss_pred             hhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCC
Q 035985          112 EFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLT  160 (293)
Q Consensus       112 ~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~  160 (293)
                           ......+|.++|...|+-+.......=-..+|+|||.+.|.+..
T Consensus       262 -----~~s~~f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~  305 (410)
T PF08732_consen  262 -----AISSMFPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGS  305 (410)
T ss_pred             -----hhhhhhhhhHHHHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence                 11234589999999999988765431236899999999998766

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=95.55  E-value=0.08  Score=43.48  Aligned_cols=132  Identities=20%  Similarity=0.188  Sum_probs=84.2

Q ss_pred             cccccchhcccCC---CCeEEEecCCCCCcc----hhhhhc--CCCEEEEecccCCCCCCC----c---cccchhHHHHH
Q 035985            2 QKKISPLIALQEL---GELKIFRADLTDEAS----FDAPIS--RSDIVFHVATPVNFSSDD----P---ETDMIKPAIQG   65 (293)
Q Consensus         2 ~~~~~~l~~~~~~---~~v~~v~~Dl~d~~~----~~~~~~--~~d~Vih~a~~~~~~~~~----~---~~~~~~~n~~~   65 (293)
                      ++|++.+++....   -.+..+..|+++++.    +.+.+.  ++.++||++|...+....    +   ......+|+.+
T Consensus        83 ~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~  162 (312)
T KOG1014|consen   83 QEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILS  162 (312)
T ss_pred             HHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecch
Confidence            4566666543222   348889999999875    334444  478899999987522111    1   12556677776


Q ss_pred             HHHHHHHH----hcCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh
Q 035985           66 VVNVLKAC----TKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE  141 (293)
Q Consensus        66 ~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~  141 (293)
                      +..+.+..    .+.+ -..+|++||....-                        +.+-.+.|+.+|...+.+...+.++
T Consensus       163 ~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~------------------------p~p~~s~ysasK~~v~~~S~~L~~E  217 (312)
T KOG1014|consen  163 VTLLTQLILPGMVERK-KGIIVNIGSFAGLI------------------------PTPLLSVYSASKAFVDFFSRCLQKE  217 (312)
T ss_pred             HHHHHHHhhhhhhcCC-CceEEEeccccccc------------------------cChhHHHHHHHHHHHHHHHHHHHHH
Confidence            55554443    3333 45799999975322                        1122358999999988888777666


Q ss_pred             C---CceEEEEccCCccCCC
Q 035985          142 N---NIDLITVIPSLMSGPS  158 (293)
Q Consensus       142 ~---~~~~~ilR~~~v~G~~  158 (293)
                      +   |+.+-.+-|..|-+..
T Consensus       218 y~~~gI~Vq~v~p~~VaTkm  237 (312)
T KOG1014|consen  218 YESKGIFVQSVIPYLVATKM  237 (312)
T ss_pred             HHhcCeEEEEeehhheeccc
Confidence            5   7888888887776653

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=95.36  E-value=0.05  Score=45.97  Aligned_cols=122  Identities=13%  Similarity=0.122  Sum_probs=71.4

Q ss_pred             CCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCC-CccEEEEecccchhcccccCCCCc
Q 035985           23 DLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTK-TVKRVILTSSAAAVSINAQNVTGL  101 (293)
Q Consensus        23 Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~  101 (293)
                      |+....++.+.++++|+|||+||.......+.. +.++.|+.-.+.+.....+.. +-..+|.+|.-.-+..       .
T Consensus        65 ~~~~~~~~~~~l~~aDiVI~tAG~~~~~~~~R~-~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t-------~  136 (325)
T cd01336          65 SVVATTDPEEAFKDVDVAILVGAMPRKEGMERK-DLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNA-------L  136 (325)
T ss_pred             CceecCCHHHHhCCCCEEEEeCCcCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHH-------H
Confidence            333355677889999999999998764434445 889999999999988888873 2334555553210100       0


Q ss_pred             cccCCCCCchhhhccCCCC-CchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCC
Q 035985          102 VMDEKNWTDVEFLSSEKPP-TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTP  161 (293)
Q Consensus       102 ~~~E~~~~~~~~~~~~~~p-~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~  161 (293)
                      .+.+.+         ...| ...=..+.+..-++-..+++..+++...++-..|+|.+...
T Consensus       137 ~~~k~~---------~~~~~~~ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~s  188 (325)
T cd01336         137 ILLKYA---------PSIPKENFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSST  188 (325)
T ss_pred             HHHHHc---------CCCCHHHEEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCCC
Confidence            111111         0011 11112234444555555666667777777666677876553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.27  E-value=0.022  Score=49.47  Aligned_cols=54  Identities=22%  Similarity=0.310  Sum_probs=40.5

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSS   87 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS   87 (293)
                      .++..++.|+.|.+++.++++++|+||||+++.       .          ...++++|.+.|  .++|-+|.
T Consensus        46 ~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~-------~----------~~~v~~~~i~~g--~~yvD~~~   99 (386)
T PF03435_consen   46 DRVEAVQVDVNDPESLAELLRGCDVVINCAGPF-------F----------GEPVARACIEAG--VHYVDTSY   99 (386)
T ss_dssp             TTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG-------G----------HHHHHHHHHHHT---EEEESS-
T ss_pred             cceeEEEEecCCHHHHHHHHhcCCEEEECCccc-------h----------hHHHHHHHHHhC--CCeeccch
Confidence            689999999999999999999999999999863       1          346888888887  36777443

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd00704 MDH Malate dehydrogenase

Probab=94.90  E-value=0.095  Score=44.20  Aligned_cols=128  Identities=16%  Similarity=0.154  Sum_probs=74.2

Q ss_pred             eEEEecCCCCC-----------cchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcC-CCccEEEE
Q 035985           17 LKIFRADLTDE-----------ASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT-KTVKRVIL   84 (293)
Q Consensus        17 v~~v~~Dl~d~-----------~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~   84 (293)
                      .+-...|+.|.           ....+.++++|+|||+||.......+-. +.+..|+.-.+.+.....+. ++-..++.
T Consensus        46 ~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~-dll~~N~~i~~~i~~~i~~~~~~~~iiiv  124 (323)
T cd00704          46 LEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERA-DLLRKNAKIFKEQGEALNKVAKPTVKVLV  124 (323)
T ss_pred             cceeeeehhhhcccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHH-HHHHHhHHHHHHHHHHHHHhCCCCeEEEE
Confidence            45555566665           3456778899999999998764444444 78999999999999999888 33445555


Q ss_pred             ecccchhcccccCCCCccccCCCCCchhhhccC-CCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCC
Q 035985           85 TSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSE-KPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTP  161 (293)
Q Consensus        85 ~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~-~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~  161 (293)
                      +|--.-+..       ..+-+.+         . .++....+.+.+..-++-...++..+++..-+.-..|+|.+...
T Consensus       125 vsNPvD~~t-------~~~~k~s---------g~~p~~~vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s  186 (323)
T cd00704         125 VGNPANTNA-------LIALKNA---------PNLPPKNFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHSNT  186 (323)
T ss_pred             eCCcHHHHH-------HHHHHHc---------CCCCHHHEEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEecccCc
Confidence            543110000       0000000         1 01222334455555555555566656655544444577876543

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=94.89  E-value=0.28  Score=38.61  Aligned_cols=33  Identities=21%  Similarity=0.261  Sum_probs=27.0

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVN   48 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~   48 (293)
                      .-.++++|+++.+++.++|.       +.|.++|+.+..+
T Consensus        57 s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~   96 (259)
T COG0623          57 SDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAP   96 (259)
T ss_pred             CCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCC
Confidence            34678999999998888774       5899999998654

>PRK05086 malate dehydrogenase; Provisional

Probab=94.33  E-value=0.14  Score=43.05  Aligned_cols=59  Identities=19%  Similarity=0.128  Sum_probs=47.8

Q ss_pred             cchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEeccc
Q 035985           28 ASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSA   88 (293)
Q Consensus        28 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~   88 (293)
                      +++.+.++++|+||.++|..+....... +.+..|.....++++++.+.+ .+++|.+.|-
T Consensus        61 ~d~~~~l~~~DiVIitaG~~~~~~~~R~-dll~~N~~i~~~ii~~i~~~~-~~~ivivvsN  119 (312)
T PRK05086         61 EDPTPALEGADVVLISAGVARKPGMDRS-DLFNVNAGIVKNLVEKVAKTC-PKACIGIITN  119 (312)
T ss_pred             CCHHHHcCCCCEEEEcCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhC-CCeEEEEccC
Confidence            3456777899999999998764434445 789999999999999999998 7888887764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=94.29  E-value=0.058  Score=46.27  Aligned_cols=53  Identities=34%  Similarity=0.479  Sum_probs=43.1

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      ++++..+.|+.|.+++.+++++.|+||+++....                 ..+++++|.+.| + ++|=+|
T Consensus        47 ~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~-----------------~~~i~ka~i~~g-v-~yvDts   99 (389)
T COG1748          47 GKVEALQVDAADVDALVALIKDFDLVINAAPPFV-----------------DLTILKACIKTG-V-DYVDTS   99 (389)
T ss_pred             ccceeEEecccChHHHHHHHhcCCEEEEeCCchh-----------------hHHHHHHHHHhC-C-CEEEcc
Confidence            4899999999999999999999999999996421                 236888898888 4 566544

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=94.23  E-value=0.18  Score=42.62  Aligned_cols=129  Identities=16%  Similarity=0.134  Sum_probs=76.1

Q ss_pred             eEEEecCCCCCc-----------chhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcC-CCccEEEE
Q 035985           17 LKIFRADLTDEA-----------SFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT-KTVKRVIL   84 (293)
Q Consensus        17 v~~v~~Dl~d~~-----------~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~   84 (293)
                      ..-+..|+.|..           ...+.++++|+|||+||.......+.. +.+..|+.-.+.+.....+. ++-..+|.
T Consensus        45 a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~-~ll~~N~~i~k~i~~~i~~~~~~~~iiiv  123 (324)
T TIGR01758        45 LEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERR-DLLSKNVKIFKEQGRALDKLAKKDCKVLV  123 (324)
T ss_pred             cceeEeehhcccchhcCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence            555666777765           345778899999999998654333344 78899999999999999988 33445666


Q ss_pred             ecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCC
Q 035985           85 TSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTP  161 (293)
Q Consensus        85 ~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~  161 (293)
                      +|--.-+...       .+.+...        -..+...=..+.+..-++-...++..+++...++-..|+|.+...
T Consensus       124 vsNPvDv~t~-------v~~~~sg--------~~~~~vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s  185 (324)
T TIGR01758       124 VGNPANTNAL-------VLSNYAP--------SIPPKNFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHSST  185 (324)
T ss_pred             eCCcHHHHHH-------HHHHHcC--------CCCcceEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCCCC
Confidence            5532100000       0000000        001111112234445555555666667777777666788876554

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=92.61  E-value=0.31  Score=38.99  Aligned_cols=125  Identities=16%  Similarity=0.172  Sum_probs=77.3

Q ss_pred             CCeEEEecCCCCCcchhhhh-------cCCCEEEEecccCCCCC--------------------------------CCcc
Q 035985           15 GELKIFRADLTDEASFDAPI-------SRSDIVFHVATPVNFSS--------------------------------DDPE   55 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~~~--------------------------------~~~~   55 (293)
                      -.++++.+|+++-.++.++.       +..|.|+-.||......                                .|..
T Consensus        61 i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~l  140 (341)
T KOG1478|consen   61 IEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGL  140 (341)
T ss_pred             eEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccch
Confidence            46899999999988776664       46799999888653211                                1222


Q ss_pred             ccchhHHHHHHHHHHHHHhc---CCCccEEEEecccchhcccccCCCCcccc-CCCCCchhhhccCCCCCchhHHHHHHH
Q 035985           56 TDMIKPAIQGVVNVLKACTK---TKTVKRVILTSSAAAVSINAQNVTGLVMD-EKNWTDVEFLSSEKPPTWGYAASKTLA  131 (293)
Q Consensus        56 ~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~SS~~~~~~~~~~~~~~~~~-E~~~~~~~~~~~~~~p~~~Y~~~K~~~  131 (293)
                      ..+++.||-|..-+++....   ++....+|.+||..+  ..      ..++ |+-      +  ......+|..||.+.
T Consensus       141 g~iFetnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a--~k------k~lsleD~------q--~~kg~~pY~sSKrl~  204 (341)
T KOG1478|consen  141 GEIFETNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMA--RK------KNLSLEDF------Q--HSKGKEPYSSSKRLT  204 (341)
T ss_pred             hhHhhhcccchhhhHhhhhhHhhcCCCCeEEEEeeccc--cc------ccCCHHHH------h--hhcCCCCcchhHHHH
Confidence            36788899888777665432   222348999999742  11      1122 111      0  222335899999999


Q ss_pred             HHHHHHHHHh---CCceEEEEccCCcc
Q 035985          132 ERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus       132 E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      .-+-....+.   .|+...++.|+...
T Consensus       205 DlLh~A~~~~~~~~g~~qyvv~pg~~t  231 (341)
T KOG1478|consen  205 DLLHVALNRNFKPLGINQYVVQPGIFT  231 (341)
T ss_pred             HHHHHHHhccccccchhhhcccCceee
Confidence            8655544433   25666666666543

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=90.90  E-value=0.38  Score=40.41  Aligned_cols=34  Identities=26%  Similarity=0.415  Sum_probs=30.2

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCC
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNF   49 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~   49 (293)
                      ...++.+|.+|++++.+..+++-+|+||+|+...
T Consensus        63 ~~~i~i~D~~n~~Sl~emak~~~vivN~vGPyR~   96 (423)
T KOG2733|consen   63 SSVILIADSANEASLDEMAKQARVIVNCVGPYRF   96 (423)
T ss_pred             cceEEEecCCCHHHHHHHHhhhEEEEecccccee
Confidence            3448889999999999999999999999998753

>PRK08309 short chain dehydrogenase; Provisional

Probab=90.64  E-value=0.3  Score=37.30  Aligned_cols=56  Identities=11%  Similarity=0.140  Sum_probs=41.5

Q ss_pred             CCeEEEecCCCCCcchhhhhcC-------CCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCcc----EEE
Q 035985           15 GELKIFRADLTDEASFDAPISR-------SDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVK----RVI   83 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~-------~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~v   83 (293)
                      .++..+.+|+.|++++.+++++       +|.+|+.+                 .+.++.++..+|++.+ ++    +|+
T Consensus        47 ~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~v-----------------h~~~~~~~~~~~~~~g-v~~~~~~~~  108 (177)
T PRK08309         47 ESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWI-----------------HSSAKDALSVVCRELD-GSSETYRLF  108 (177)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEec-----------------cccchhhHHHHHHHHc-cCCCCceEE
Confidence            4688899999999988887753       45555443                 3345678999999999 88    888


Q ss_pred             Eeccc
Q 035985           84 LTSSA   88 (293)
Q Consensus        84 ~~SS~   88 (293)
                      ++=+.
T Consensus       109 h~~gs  113 (177)
T PRK08309        109 HVLGS  113 (177)
T ss_pred             EEeCC
Confidence            86543

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=88.94  E-value=1.2  Score=32.56  Aligned_cols=55  Identities=18%  Similarity=0.129  Sum_probs=40.7

Q ss_pred             hhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           31 DAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        31 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      .+.++++|+||.+||.......... +.++.|..-.+.+.+...+.++-..++.+|
T Consensus        64 ~~~~~~aDivvitag~~~~~g~sR~-~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   64 YEALKDADIVVITAGVPRKPGMSRL-DLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             GGGGTTESEEEETTSTSSSTTSSHH-HHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             ccccccccEEEEeccccccccccHH-HHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            4566789999999998654434444 788999999999999999887334455543

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=87.59  E-value=9.5  Score=33.10  Aligned_cols=32  Identities=16%  Similarity=0.085  Sum_probs=26.3

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPV   47 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~   47 (293)
                      .+..+.+|+++++.+.++++       ++|++||.+|..
T Consensus       104 ~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        104 YAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            46778999999988776653       589999999876

>PRK06720 hypothetical protein; Provisional

Probab=87.18  E-value=1.7  Score=32.86  Aligned_cols=34  Identities=26%  Similarity=0.404  Sum_probs=26.8

Q ss_pred             CCeEEEecCCCCCcchhhhh-------cCCCEEEEecccCC
Q 035985           15 GELKIFRADLTDEASFDAPI-------SRSDIVFHVATPVN   48 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~   48 (293)
                      ..+.++.+|+++.+.+.+++       .++|++||+||...
T Consensus        65 ~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~  105 (169)
T PRK06720         65 GEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYK  105 (169)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence            35678899999998777654       36899999999753

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=84.96  E-value=2.8  Score=34.21  Aligned_cols=59  Identities=14%  Similarity=0.106  Sum_probs=45.3

Q ss_pred             CcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           27 EASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        27 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      ++.++++++++|+|+--||...-+.-.-+ +.+++|..-.++|..++.+.-+-..+.++|
T Consensus        87 ~~~L~~al~~advVvIPAGVPRKPGMTRD-DLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen   87 ADGLENALKGADVVVIPAGVPRKPGMTRD-DLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             hhHHHHHhcCCCEEEecCCCCCCCCCcHH-HhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            45788899999999999998764433344 889999999999999998886334444544

>cd05295 MDH_like Malate dehydrogenase-like

Probab=83.35  E-value=1.8  Score=38.18  Aligned_cols=117  Identities=12%  Similarity=0.084  Sum_probs=70.3

Q ss_pred             hhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCC-ccEEEEecccchhcccccCCCCccccCCCCC
Q 035985           31 DAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKT-VKRVILTSSAAAVSINAQNVTGLVMDEKNWT  109 (293)
Q Consensus        31 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  109 (293)
                      .+.++++|+||-+||.......+-. +....|..-.+.+.++..+... -.+++.+.|-- +-...     ..+....+ 
T Consensus       194 ~ea~~daDvvIitag~prk~G~~R~-DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNP-vD~~t-----~i~~k~ap-  265 (452)
T cd05295         194 DVAFKDAHVIVLLDDFLIKEGEDLE-GCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTF-LNLKT-----SILIKYAP-  265 (452)
T ss_pred             HHHhCCCCEEEECCCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCc-HHHHH-----HHHHHHcC-
Confidence            4667789999999998654434444 7899999999999999988873 14555544321 00000     00000000 


Q ss_pred             chhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC
Q 035985          110 DVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD  162 (293)
Q Consensus       110 ~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~  162 (293)
                             ..++....+.+.+..-++....++..+++...|+-..|+|.+....
T Consensus       266 -------giP~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~sq  311 (452)
T cd05295         266 -------SIPRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGGNT  311 (452)
T ss_pred             -------CCCHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCCce
Confidence                   1112234455556655666666777788877777777888766543

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=81.92  E-value=4.3  Score=34.09  Aligned_cols=118  Identities=14%  Similarity=0.066  Sum_probs=68.2

Q ss_pred             hhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccccCCCCccccCCCCC
Q 035985           30 FDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWT  109 (293)
Q Consensus        30 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  109 (293)
                      +.+.++++|+||-+||........-. +.+..|..-.+.+++...+.++-..++.+|--.-+..       ..+++-.+.
T Consensus        62 ~y~~~~daDivvitaG~~~k~g~tR~-dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~-------~i~t~~~~~  133 (310)
T cd01337          62 LKKALKGADVVVIPAGVPRKPGMTRD-DLFNINAGIVRDLATAVAKACPKALILIISNPVNSTV-------PIAAEVLKK  133 (310)
T ss_pred             hHHhcCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHH-------HHHHHHHHH
Confidence            45678899999999998654434445 8899999999999999998874344555443210000       000110000


Q ss_pred             chhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCC-CCC
Q 035985          110 DVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPS-LTP  161 (293)
Q Consensus       110 ~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~-~~~  161 (293)
                      .     ....+....|.+-+..-++-...++..+++..-++ ++|+|.+ ...
T Consensus       134 ~-----s~~p~~rviG~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeHsGds  180 (310)
T cd01337         134 A-----GVYDPKRLFGVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGHSGVT  180 (310)
T ss_pred             h-----cCCCHHHEEeeechHHHHHHHHHHHHhCcCHHHEE-EEEEecCCCCc
Confidence            0     01111123333335555666666666677666666 6788887 444

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=80.93  E-value=1.7  Score=42.59  Aligned_cols=32  Identities=19%  Similarity=0.294  Sum_probs=28.6

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEeccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATP   46 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~   46 (293)
                      ++++.++.|++|.+++.++++++|+||.+...
T Consensus       627 ~~~~~v~lDv~D~e~L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        627 ENAEAVQLDVSDSESLLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             CCCceEEeecCCHHHHHHhhcCCCEEEECCCc
Confidence            46888999999999999999999999999864

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=80.42  E-value=5.1  Score=33.93  Aligned_cols=115  Identities=15%  Similarity=0.135  Sum_probs=68.6

Q ss_pred             hhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCC-ccEEEEecccchhcccccCCCCccccCCCCC
Q 035985           31 DAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKT-VKRVILTSSAAAVSINAQNVTGLVMDEKNWT  109 (293)
Q Consensus        31 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~  109 (293)
                      .+.++++|+||.+||.......+-. +.+..|....+.+...+.+..+ -..++.+|--.-+..       ....+.++ 
T Consensus        74 ~~~~~daDvVVitAG~~~k~g~tR~-dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t-------~v~~k~s~-  144 (323)
T TIGR01759        74 EEAFKDVDAALLVGAFPRKPGMERA-DLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNA-------LIASKNAP-  144 (323)
T ss_pred             HHHhCCCCEEEEeCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHH-------HHHHHHcC-
Confidence            4567789999999998654434445 8899999999999999999873 344555542110000       00000000 


Q ss_pred             chhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCC
Q 035985          110 DVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTP  161 (293)
Q Consensus       110 ~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~  161 (293)
                             ...+....|.+.+..-++-...++..+++...++-..|+|.+...
T Consensus       145 -------g~p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~s  189 (323)
T TIGR01759       145 -------DIPPKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSNT  189 (323)
T ss_pred             -------CCCHHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCCc
Confidence                   001112334455666666666666667777767666688876543

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PF08338 DUF1731: Domain of unknown function (DUF1731); InterPro: IPR013549 This domain of unknown function appears towards the C terminus of proteins of the NAD dependent epimerase/dehydratase family (IPR001509 from INTERPRO) in bacteria, eukaryotes and archaea

Probab=80.09  E-value=2  Score=24.82  Aligned_cols=29  Identities=31%  Similarity=0.590  Sum_probs=17.5

Q ss_pred             cccccchHHHHhcCCcccc-CHHHHHHHHH
Q 035985          255 AKLILSSEKLISEGFCFKY-GIEDIYDQTV  283 (293)
Q Consensus       255 ~~~~~d~~k~~~lG~~~~~-~~~~~i~~~i  283 (293)
                      .+.+..+.|+.+.||+.++ ++++++++.+
T Consensus        19 ~~q~v~P~kL~~~GF~F~~p~l~~AL~~ll   48 (48)
T PF08338_consen   19 ASQRVSPKKLLEAGFQFRYPTLEEALRDLL   48 (48)
T ss_dssp             -EEEE--HHHHHTT---S-SSHHHHHHH--
T ss_pred             CCCeecChHHHHCCCcccCCCHHHHHhccC
Confidence            5677888999999999998 8999988753

Many of the proteins in which it is found are involved in cell-division inhibition. ; PDB: 3OH8_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	293
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		1e-140
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		8e-64
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		9e-52
1y1p_A	342	X-Ray Structure Of Aldehyde Reductase With Nadph Le		3e-16
1ujm_A	342	Crystal Structure Of Aldehyde Reductase 2 From Spor		9e-16

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score =  493 bits (1270), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 228/293 (77%), Positives = 269/293 (91%)
Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           NQKK+S L+ LQELG+LKIFRADLTDE SF+API+  D VFHVATPV+F+S+DPE DMIK
Sbjct: 45  NQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIK 104
Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PAIQGVVNV+KACT+ K+VKRVILTSSAAAV+IN  + TGLV+DEKNWTD+EFL+S KPP
Sbjct: 105 PAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPP 164
Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           TWGY ASKTLAE+AA KFA+ENNIDLITVIP+LM+G SLT D+PSS+ LA +LITGN+FL
Sbjct: 165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFL 224
Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
           +NG+KGMQMLSGS+SI+HVEDVCRAHIF+AEKESASGRYICCA NTSVPELAKFL+KR+P
Sbjct: 225 INGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYP 284
Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           +YKVPTDFGDFP ++KLI+SSEKL+ EGF FKYGIE+IYD++VEY K KG+L+
Sbjct: 285 QYKVPTDFGDFPPKSKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLLQ 337

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score =  240 bits (612), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 124/294 (42%), Positives = 185/294 (62%), Gaps = 11/294 (3%)
Query: 1   NQKKISPLIALQEL-GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
           N KK+  L+ L +    L +++ADL DE SFD  I     VFHVATP++F S DPE ++I
Sbjct: 41  NVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVI 100
Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           KP I+G++ ++K+C   KTV+R++ TSSA  V+I    +   V DE  W+D+EF  ++K 
Sbjct: 101 KPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLP--VYDESCWSDMEFCRAKKM 158
Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
             W Y  SKTLAE+AA K+A+ENNID IT+IP+L+ GP +   +P S+  A + ITGN+ 
Sbjct: 159 TAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA 218
Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
             + ++  Q +       H++D+C AHI+L E   A GRYIC + +  + +LAK L +++
Sbjct: 219 HYSIIRQGQFV-------HLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKY 271
Query: 240 PEYKVPTDFGDFPSEAK-LILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
           PEY +PT+F       K +  SS+KL   GF FKY +ED++   V+  + KG+L
Sbjct: 272 PEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLL 325

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score =  200 bits (508), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 106/279 (37%), Positives = 162/279 (58%), Gaps = 12/279 (4%)
Query: 16  ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTK 75
           +L  F ADL++  SF A I     +FH A+P++F+  +PE  + K  + G + +LKAC  
Sbjct: 54  KLHFFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVN 113
Query: 76  TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAA 135
           +KTVKR I TSS +AVS N ++    V+DE +W+DV+ L S KP  W YA SKTLAE+A 
Sbjct: 114 SKTVKRFIYTSSGSAVSFNGKDKD--VLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAV 171
Query: 136 CKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSIS 195
            +F ++N ID++T+I   + G  + P +P S+  A  L+ G        K  Q+      
Sbjct: 172 LEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLG--------KKEQIGVTRFH 223
Query: 196 ISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPT--DFGDFPS 253
           + HV+DV RAHI+L E     GRY C      + E+++ L+ ++PEY++ T  +  +   
Sbjct: 224 MVHVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKG 283
Query: 254 EAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
                L+++KL+  GF FKY IED++D  ++  K KG L
Sbjct: 284 ARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL 322

>pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 13/153 (8%)
Query: 23  DLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRV 82
           D+  + ++D  I  +  V H+A+ V+FS+   E  ++ PAI G +N L+A   T +VKR 
Sbjct: 70  DMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDE--VVTPAIGGTLNALRAAAATPSVKRF 127
Query: 83  ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFL--------SSEKPPTWGYAASKTLAERA 134
           +LTSS  +  I   NV G+ +DEK+W ++E +        S  +   W YAASKT AE A
Sbjct: 128 VLTSSTVSALIPKPNVEGIYLDEKSW-NLESIDKAKTLPESDPQKSLWVYAASKTEAELA 186
Query: 135 ACKFAQEN--NIDLITVIPSLMSGPSLTPDIPS 165
           A KF  EN  +  L  V+P+   G    P+  S
Sbjct: 187 AWKFMDENKPHFTLNAVLPNYTIGTIFDPETQS 219

>pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 23  DLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRV 82
           D   + ++D  I  +  V H+A+ V+FS+   E  ++ PAI G +N L+A   T +VKR 
Sbjct: 70  DXLKQGAYDEVIKGAAGVAHIASVVSFSNKYDE--VVTPAIGGTLNALRAAAATPSVKRF 127
Query: 83  ILTSSAAAVSINAQNVTGLVMDEKNWT-----DVEFLSSEKPPT--WGYAASKTLAERAA 135
           +LTSS  +  I   NV G+ +DEK+W        + L    P    W YAASKT AE AA
Sbjct: 128 VLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAA 187
Query: 136 CKFAQEN--NIDLITVIPSLMSGPSLTPD 162
            KF  EN  +  L  V+P+   G    P+
Sbjct: 188 WKFXDENKPHFTLNAVLPNYTIGTIFDPE 216

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	293
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-142
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-127
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-127
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	2e-97
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	3e-46
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	2e-42
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	1e-17
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	4e-17
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	5e-17
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	1e-14
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	6e-14
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	2e-12
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-12
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	8e-12
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	1e-11
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-11
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	2e-10
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	2e-10
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	2e-10
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	7e-10
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	8e-09
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-08
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	3e-08
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	5e-08
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	5e-08
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-07
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	4e-07
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	5e-07
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	7e-07
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	1e-06
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	3e-06
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	7e-06
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	3e-05
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	5e-05
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	6e-05
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	7e-05
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	8e-05
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	9e-05
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	3e-04
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	8e-04

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  402 bits (1036), Expect = e-142
 Identities = 228/293 (77%), Positives = 269/293 (91%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIK 60
           NQKK+S L+ LQELG+LKIFRADLTDE SF+API+  D VFHVATPV+F+S+DPE DMIK
Sbjct: 45  NQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIK 104

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
           PAIQGVVNV+KACT+ K+VKRVILTSSAAAV+IN  + TGLV+DEKNWTD+EFL+S KPP
Sbjct: 105 PAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPP 164

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           TWGY ASKTLAE+AA KFA+ENNIDLITVIP+LM+G SLT D+PSS+ LA +LITGN+FL
Sbjct: 165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFL 224

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP 240
           +NG+KGMQMLSGS+SI+HVEDVCRAHIF+AEKESASGRYICCA NTSVPELAKFL+KR+P
Sbjct: 225 INGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYP 284

Query: 241 EYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           +YKVPTDFGDFP ++KLI+SSEKL+ EGF FKYGIE+IYD++VEY K KG+L+
Sbjct: 285 QYKVPTDFGDFPPKSKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLLQ 337

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  364 bits (936), Expect = e-127
 Identities = 124/295 (42%), Positives = 184/295 (62%), Gaps = 11/295 (3%)

Query: 1   NQKKISPLIAL-QELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
           N KK+  L+ L +    L +++ADL DE SFD  I     VFHVATP++F S DPE ++I
Sbjct: 41  NVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVI 100

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           KP I+G++ ++K+C   KTV+R++ TSSA  V+I        V DE  W+D+EF  ++K 
Sbjct: 101 KPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ--LPVYDESCWSDMEFCRAKKM 158

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
             W Y  SKTLAE+AA K+A+ENNID IT+IP+L+ GP +   +P S+  A + ITGN+ 
Sbjct: 159 TAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA 218

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
             + ++  Q +       H++D+C AHI+L E   A GRYIC + +  + +LAK L +++
Sbjct: 219 HYSIIRQGQFV-------HLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKY 271

Query: 240 PEYKVPTDFGDFPSEAKLI-LSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK 293
           PEY +PT+F       K +  SS+KL   GF FKY +ED++   V+  + KG+L 
Sbjct: 272 PEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLP 326

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  363 bits (933), Expect = e-127
 Identities = 109/295 (36%), Positives = 167/295 (56%), Gaps = 13/295 (4%)

Query: 1   NQKKISPLIALQELGE-LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
            ++ +S L  L    E L  F ADL++  SF A I     +FH A+P++F+  +PE  + 
Sbjct: 38  RKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVT 97

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           K  + G + +LKAC  +KTVKR I TSS +AVS N ++    V+DE +W+DV+ L S KP
Sbjct: 98  KRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD--KDVLDESDWSDVDLLRSVKP 155

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF 179
             W YA SKTLAE+A  +F ++N ID++T+I   + G  + P +P S+  A  L+ G   
Sbjct: 156 FGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKK- 214

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
                   Q+      + HV+DV RAHI+L E     GRY C      + E+++ L+ ++
Sbjct: 215 -------EQIGVTRFHMVHVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKY 267

Query: 240 PEYKVPT--DFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML 292
           PEY++ T  +  +        L+++KL+  GF FKY IED++D  ++  K KG L
Sbjct: 268 PEYQILTVDELKEIKGARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL 322

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  289 bits (741), Expect = 2e-97
 Identities = 76/303 (25%), Positives = 113/303 (37%), Gaps = 24/303 (7%)

Query: 1   NQKKISPLIALQELGEL-KIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
               +      +  G        D+  + ++D  I  +  V H+A+ V+F   +   +++
Sbjct: 47  KLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSF--SNKYDEVV 104

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
            PAI G +N L+A   T +VKR +LTSS  +  I   NV G+ +DEK+W       ++  
Sbjct: 105 TPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL 164

Query: 120 PT-------WGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSGPSLTPDIP--SSVA 168
           P        W YAASKT AE AA KF  EN  +  L  V+P+   G    P+    S+  
Sbjct: 165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSG 224

Query: 169 LAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICCAVNTS 227
              +L  G       +     L          D+   H+           R    A    
Sbjct: 225 WMMSLFNGE------VSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFD 278

Query: 228 VPELAKFLNKRFPEYKVPTDF---GDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVE 284
              +     K +P    P DF   G   S+     S E L S G      IE+     V 
Sbjct: 279 WNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVG 338

Query: 285 YLK 287
              
Sbjct: 339 SET 341

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  157 bits (400), Expect = 3e-46
 Identities = 50/318 (15%), Positives = 102/318 (32%), Gaps = 54/318 (16%)

Query: 6   SPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQG 65
           S +  L  L   +   A++ D A  +  +   D V   A          + + +  A+  
Sbjct: 48  SQIQRLAYLE-PECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQ-EEVASALGQ 105

Query: 66  VVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYA 125
                 AC + + V R++   SA A+    ++  GL   E  + D     S       Y 
Sbjct: 106 TNPFYAACLQAR-VPRILYVGSAYAM---PRHPQGLPGHEGLFYD-----SLPSGKSSYV 156

Query: 126 ASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI-PSSVALAATLITGNDFLLNGL 184
             K   +  A + A+   + ++  IP ++ G     DI P++  +   +  G        
Sbjct: 157 LCKWALDEQAREQARNG-LPVVIGIPGMVLGE---LDIGPTTGRVITAIGNG-------- 204

Query: 185 KGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPE----LAKFLNKRFP 240
           +    ++G  ++    +  R  +   E+     RY+    N  + +    +A+ L +  P
Sbjct: 205 EMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAP 264

Query: 241 EYKVPT-------DFGDFPS-----------------EAKLILSSEKLISE-GFCFKYGI 275
              +           G                          L   K   E GF     +
Sbjct: 265 -QPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTAL 323

Query: 276 EDIYDQTVEYLKTKGMLK 293
           +D   + +++ +  G   
Sbjct: 324 DDTLLRAIDWFRDNGYFN 341

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  144 bits (366), Expect = 2e-42
 Identities = 33/207 (15%), Positives = 61/207 (29%), Gaps = 36/207 (17%)

Query: 17  LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT 76
           LK+ +AD++           +D V     P     ++P+  +    I+  + ++    K 
Sbjct: 48  LKVKKADVSSLDEVCEVCKGADAVISAFNPG---WNNPD--IYDETIKVYLTIIDGVKKA 102

Query: 77  KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAAC 136
             V R ++   A ++ I                 +  + S + P       K L E    
Sbjct: 103 G-VNRFLMVGGAGSLFIA--------------PGLRLMDSGEVPENILPGVKALGEFYLN 147

Query: 137 KFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISI 196
              +E  ID +   P+    P +                G D ++  + G   +      
Sbjct: 148 FLMKEKEIDWVFFSPAADMRPGVRT---------GRYRLGKDDMIVDIVGNSHI------ 192

Query: 197 SHVEDVCRAHIFLAEKESASGRYICCA 223
             VED   A I   E            
Sbjct: 193 -SVEDYAAAMIDELEHPKHHQERFTIG 218

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 80.6 bits (200), Expect = 1e-17
 Identities = 50/296 (16%), Positives = 94/296 (31%), Gaps = 67/296 (22%)

Query: 18  KIFRADLTDEASFDAPISRSDIVFHVA--TPVNFSSDDPETDMIKPAIQGVVNVLKACTK 75
           ++ +ADL  +   D  +  ++ V+H+A    V   +++P+    +  +     +L+A  K
Sbjct: 46  RLVKADLAADDIKDY-LKGAEEVWHIAANPDVRIGAENPDEI-YRNNVLATYRLLEAMRK 103

Query: 76  TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAA 135
              V R++ TS++            +   E   T          P   Y ASK   E   
Sbjct: 104 AG-VSRIVFTSTSTVYGEAKV----IPTPEDYPTH---------PISLYGASKLACEALI 149

Query: 136 CKFAQENNIDLI-----TVIPSLMSGPSLTPDIPSSVALAATL------ITGN-----DF 179
             +    ++         VI     G   T  +     +          I GN      +
Sbjct: 150 ESYCHTFDMQAWIYRFANVI-----GRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSY 204

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRY-ICCAVNTSVPELAKFLNKR 238
           +                 ++ D   A +F    +     + I       V  +A+ + + 
Sbjct: 205 I-----------------YISDCVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEE 247

Query: 239 F-----PEYKVPTDF--GDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLK 287
                   +        GD P    ++LS EKL   G+  +Y  E+     V  L 
Sbjct: 248 LGLSPRFRFTGGDRGWKGDVP---VMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLV 300

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 78.9 bits (195), Expect = 4e-17
 Identities = 45/287 (15%), Positives = 104/287 (36%), Gaps = 33/287 (11%)

Query: 17  LKIFRADLTDEASFDAPISRS--DIVFHVATPVNF-SSDDPETDMIKPAIQGVVNVLKAC 73
           +K    D+++    D  + +   D +FH+A  ++     DP     K  + G  N+L+A 
Sbjct: 41  IKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAY-KVNMNGTYNILEAA 99

Query: 74  TKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAER 133
            + + V++V++ S+               +     T          P   +  +K  AE 
Sbjct: 100 KQHR-VEKVVIPSTIGVFGPETPK---NKVPSITITR---------PRTMFGVTKIAAEL 146

Query: 134 AACKFAQENNIDLITVIPSLMSGPSLTPDIPSS---VALAATLITGNDFLLNGLKGMQML 190
               + ++  +D+ ++    +      P   ++   V +    +    +        + L
Sbjct: 147 LGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYL-APNRAL 205

Query: 191 SGSISISHVEDVCRAHIFLAEKESASGR----YICCAVNTSVPELAKFLNKRFPEYKV-- 244
                + ++ D  +A + L E +         Y   A   +  EL   + +R PE+++  
Sbjct: 206 P----MMYMPDALKALVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEY 261

Query: 245 -PTDFGDFPSEAKLILSSEKLISE-GFCFKYGIEDIYDQTVEYLKTK 289
                    +     L S +  +E GF  +Y ++   D  ++++  K
Sbjct: 262 KEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEK 308

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 79.3 bits (196), Expect = 5e-17
 Identities = 46/244 (18%), Positives = 88/244 (36%), Gaps = 32/244 (13%)

Query: 11  LQELGELKIFRADLTDEASFDAPISRSDIVFHVATP--VNFSSDDPETDMIKPAIQGVVN 68
           + +   ++     +TD+A   +     D VFH+AT      S  DP  D  +      + 
Sbjct: 74  VPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLAD-HENNTLTTLK 132

Query: 69  VLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASK 128
           + +     K +K+V+ +++  +++           D+   T+   + S       Y+ SK
Sbjct: 133 LYERLKHFKRLKKVVYSAAGCSIA-------EKTFDDAKATEETDIVSLHNNDSPYSMSK 185

Query: 129 TLAERAACKFAQENNIDLITVI--------PSLMSGPSLTPDIPSSVALA------ATLI 174
              E  +  + +++ +   TV         P  + G       P++V            +
Sbjct: 186 IFGEFYSVYYHKQHQLP--TVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKAL 243

Query: 175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRY-ICCAVNTSVPELAK 233
            G    L    G+     +     VEDV    I  A   +  G Y I     TS+ +LA 
Sbjct: 244 KGMPLPLEN-GGVA----TRDFIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLAT 298

Query: 234 FLNK 237
            +N+
Sbjct: 299 KINE 302

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 71.8 bits (177), Expect = 1e-14
 Identities = 44/295 (14%), Positives = 87/295 (29%), Gaps = 70/295 (23%)

Query: 18  KIFRADLTDEASFDAPISRSDIVFHVA--TPVNFSSDDPETDMIKPAIQGVVNVLKACTK 75
           +   +D T E   +  ++  D V H+A          +   +          N+  AC +
Sbjct: 45  EYRVSDYTLEDLINQ-LNDVDAVVHLAATRGSQGKISEFHDN-----EILTQNLYDACYE 98

Query: 76  TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAA 135
              +  ++  S+ +A S      T L  +EK             P   Y  SK   E   
Sbjct: 99  NN-ISNIVYASTISAYSDE----TSLPWNEKELPL---------PDLMYGVSKLACEHIG 144

Query: 136 CKFAQENNIDLI-----TVIPSLMSGPSLTPD--IPSSVALAAT----LITGN-----DF 179
             ++++  + +       +      G +   +  I      A       +  N     +F
Sbjct: 145 NIYSRKKGLCIKNLRFAHLY-----GFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREF 199

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRY-ICCAVNTSVPELAKFLNKR 238
           L                 + +D  ++ I+  ++E  SG + I      +  E+A  +N  
Sbjct: 200 L-----------------YAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNA 242

Query: 239 F-----PEYKVPTDFGDFPSEAKLILSSEKLISE-GFCFKYGIEDIYDQTVEYLK 287
           F        K P             + S K      F   Y      ++    ++
Sbjct: 243 FGNKDNLLVKNPNANEGIH---SSYMDSSKAKELLDFSTDYNFATAVEEIHLLMR 294

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 69.9 bits (172), Expect = 6e-14
 Identities = 48/306 (15%), Positives = 90/306 (29%), Gaps = 76/306 (24%)

Query: 18  KIFRADLTDEASFDAPISRSDIVFHVA--TPVNFSSDDPETDMIKPAIQGVVNVLKACTK 75
           ++   DL D +       + D+VFH A    V  S+ +P        +    NVL+   +
Sbjct: 46  ELHVRDLKDYSWGAG--IKGDVVFHFAANPEVRLSTTEPIVH-FNENVVATFNVLEWARQ 102

Query: 76  TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAA 135
           T  V+ V+  SS+            +   E+             P   Y A+K   E   
Sbjct: 103 TG-VRTVVFASSSTVYGDADV----IPTPEEEPYK---------PISVYGAAKAAGEVMC 148

Query: 136 CKFAQENNIDLI-----TVIPSLMSGPSLTPDIPSSVALAATL------ITGN-----DF 179
             +A+   +  +      V+     GP L   +     +          + G+      +
Sbjct: 149 ATYARLFGVRCLAVRYANVV-----GPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSY 203

Query: 180 LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRY-----ICCAVNTSVPELAKF 234
           L                 +V D   A +   +K            +       V ++A+ 
Sbjct: 204 L-----------------YVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQI 246

Query: 235 LNKRF-----PEYKVPTDF-----GDFPSEAKLILSSEKLISE-GFCFKYGIEDIYDQTV 283
           + +             T       GD      + L+  KL+   G+       +   +T 
Sbjct: 247 VAEVLGLRPEIRLVPSTPDGRGWPGDVK---YMTLAVTKLMKLTGWRPTMTSAEAVKKTA 303

Query: 284 EYLKTK 289
           E L  +
Sbjct: 304 EDLAKE 309

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 65.7 bits (160), Expect = 2e-12
 Identities = 33/242 (13%), Positives = 73/242 (30%), Gaps = 48/242 (19%)

Query: 10  ALQELGELKIFRAD-LTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVN 68
            L    +  IF     T E   ++ + ++D + H+A       +  +   +   +  + +
Sbjct: 19  DLTSTTDHHIFEVHRQTKEEELESALLKADFIVHLAGVN--RPEHDKEFSLG-NVSYLDH 75

Query: 69  VLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASK 128
           VL   T+      ++L+SS  A   N                             Y  SK
Sbjct: 76  VLDILTRNTKKPAILLSSSIQATQDNP----------------------------YGESK 107

Query: 129 TLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKG-- 186
              E+   ++A+E    +       + G    P+  S +A          F     +   
Sbjct: 108 LQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIAT---------FCYKIARNEE 158

Query: 187 --MQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC---CAVNTSVPELAKFLNKRFPE 241
             +   +  +++++V+D+        E        +         ++ E+   L K    
Sbjct: 159 IQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQS 218

Query: 242 YK 243
             
Sbjct: 219 RL 220

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 64.6 bits (158), Expect = 2e-12
 Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 16/132 (12%)

Query: 18  KIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTK 77
           +I   DL D  +    +   D + H+      S + P  D+++  I G  N+ +A     
Sbjct: 45  EIVACDLADAQAVHDLVKDCDGIIHLGGV---SVERPWNDILQANIIGAYNLYEAARNLG 101

Query: 78  TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACK 137
              R++  SS   +    +      +D +             P   Y  SK   E  A  
Sbjct: 102 -KPRIVFASSNHTIGYYPRTTR---IDTEVPRR---------PDSLYGLSKCFGEDLASL 148

Query: 138 FAQENNIDLITV 149
           +  + +I+ + +
Sbjct: 149 YYHKFDIETLNI 160

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 63.3 bits (155), Expect = 8e-12
 Identities = 65/299 (21%), Positives = 106/299 (35%), Gaps = 65/299 (21%)

Query: 18  KIFRADLTDEASFDAPIS--RSDIVFHVA--TPVNFSSDDPETDMIKPAIQGVVNVLKAC 73
             FR DL D+   +      R   V H A    V  S +DP  D  +  + G +N+L+AC
Sbjct: 46  PFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDF-EVNLLGGLNLLEAC 104

Query: 74  TKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAER 133
            +   V++++  S+  A+        G   +E         +    P   YAASK   E 
Sbjct: 105 RQYG-VEKLVFASTGGAIYGE--VPEGERAEE---------TWPPRPKSPYAASKAAFEH 152

Query: 134 AACKFAQENNIDLITVIPSL----MSGPSLTPDIPSSV-ALAATLITGNDFLLNGLKGMQ 188
               + Q   +    V   L    + GP   P   + V A+ A  +              
Sbjct: 153 YLSVYGQSYGLK--WVS--LRYGNVYGPRQDPHGEAGVVAIFAERVLKGL---------- 198

Query: 189 MLSGSISIS---------------HVEDVCRAHIFLAEKESASGRY-ICCAVNTSVPEL- 231
                +++                +V DV  AH  LA   S  G Y +      +  E+ 
Sbjct: 199 ----PVTLYARKTPGDEGCVRDYVYVGDVAEAHA-LAL-FSLEGIYNVGTGEGHTTREVL 252

Query: 232 ---AKFLNKRFPEYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLK 287
              A+   K       P   GD     + +LS  KL++ G+  K G ++    TV++ +
Sbjct: 253 MAVAEAAGKAPEVQPAPPRPGD-L--ERSVLSPLKLMAHGWRPKVGFQEGIRLTVDHFR 308

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 63.8 bits (155), Expect = 1e-11
 Identities = 28/215 (13%), Positives = 55/215 (25%), Gaps = 19/215 (8%)

Query: 17  LKIFRADLT------DEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVL 70
           L++   D +      D+  +       D++   A  VN     P  ++  P + G   ++
Sbjct: 142 LEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA---FPYHELFGPNVAGTAELI 198

Query: 71  KACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTL 130
           +    TK  K     S+A   +  A   +    D          + +     GY  SK  
Sbjct: 199 RIALTTKL-KPFTYVSTADVGA--AIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWA 255

Query: 131 AERAACKFAQENNIDLITVIPSLMSGPSLTPD-------IPSSVALAATLITGNDFLLNG 183
            E    +      + +      ++   +           +   V                
Sbjct: 256 GEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEP 315

Query: 184 LKGMQMLSGSISISHVEDVCRAHIFLAEKESASGR 218
                          V  V  A   L  + + S  
Sbjct: 316 DSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSL 350

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 62.8 bits (152), Expect = 2e-11
 Identities = 39/254 (15%), Positives = 75/254 (29%), Gaps = 20/254 (7%)

Query: 6   SPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQG 65
               A  E   +   + D++D     A +S    V HV      +    + +  +   + 
Sbjct: 39  RTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQ-ENCEANSKM 97

Query: 66  VVNVLKACTKT-KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGY 124
             NVL A       +K + L +         ++   +   +  +T  E L   K   + Y
Sbjct: 98  FRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYT--EDLPRLKYMNFYY 155

Query: 125 AASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTP--DIPSSVALAATLI--TGNDFL 180
                + E       ++  +      P  + G S     ++  ++ + A +    G    
Sbjct: 156 DLEDIMLEEV----EKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLR 211

Query: 181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSV------PELAKF 234
             G K      G    S  + +   HI+ A    A       +             LA+ 
Sbjct: 212 FTGCKA--AWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQ 269

Query: 235 LNKRFPEYKVPTDF 248
                 EY+   D 
Sbjct: 270 FGVECGEYEEGVDL 283

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 59.5 bits (145), Expect = 2e-10
 Identities = 56/312 (17%), Positives = 89/312 (28%), Gaps = 85/312 (27%)

Query: 10  ALQELGELKIFRADLTDEASFDAPISRSDI--VFHVATPVNFSSDDPETDMIKPA---IQ 64
            L  +  L +    +TD    +          V H A     +  DP+ D  + A   +Q
Sbjct: 60  VLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAA----AYKDPD-DWAEDAATNVQ 114

Query: 65  GVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTG----LVMDEKNWTDVEFLSSEKPP 120
           G +NV KA +K   VKR++   +A           G    + +            S   P
Sbjct: 115 GSINVAKAASKAG-VKRLLNFQTAL--------CYGRPATVPIPI---------DSPTAP 156

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVI--------PSLMSGPSLTPDIP--SSVALA 170
              Y  SKT  E            D+  V         P L  GP     IP       A
Sbjct: 157 FTSYGISKTAGEAFLMMS------DVPVVSLRLANVTGPRLAIGP-----IPTFYKRLKA 205

Query: 171 ATLITGN----DFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRY-ICCAVN 225
                 +    DFL                  + D         ++   +G + +     
Sbjct: 206 GQKCFCSDTVRDFL-----------------DMSDFLAIADLSLQEGRPTGVFNVSTGEG 248

Query: 226 TSVPELAKFLNK------RFPEYKVPTDFGDFPSEAKLILSSEKLISE-GFCFKYGIEDI 278
            S+ E+   +          P   V     D      ++L   K  +E G+  K   +D 
Sbjct: 249 HSIKEVFDVVLDYVGATLAEPVPVVAPGADD-V--PSVVLDPSKTETEFGWKAKVDFKDT 305

Query: 279 YDQTVEYLKTKG 290
               + +    G
Sbjct: 306 ITGQLAWYDKYG 317

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 59.6 bits (145), Expect = 2e-10
 Identities = 52/302 (17%), Positives = 92/302 (30%), Gaps = 64/302 (21%)

Query: 10  ALQELGELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFSSDDPETDMIKPA---IQ 64
            L++   L      + D A  +  I   + D V H A     S  DP+ D          
Sbjct: 61  HLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA----SYKDPD-DWYNDTLTNCV 115

Query: 65  GVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGY 124
           G  NV++A  K   V R +   +A              +   +  +        P    Y
Sbjct: 116 GGSNVVQAAKKNN-VGRFVYFQTALCY---GVKPIQQPVRLDHPRN--------PANSSY 163

Query: 125 AASKTLAERAACKFAQENNIDLI-----TVIPSLMSGPSLTPD-IPSSVALAATLITGND 178
           A SK+  E     + + + +D +      V+     GP      +P              
Sbjct: 164 AISKSANE----DYLEYSGLDFVTFRLANVV-----GPRNVSGPLPI------------- 201

Query: 179 FLLNGLKGMQMLSGSIS--ISHVEDVCRAHIFLAEKESASGRY-ICCAVNTSVPELAKFL 235
           F     +G +            V+D+ RA +  A      G Y      + ++ EL   +
Sbjct: 202 FFQRLSEGKKCFVTKARRDFVFVKDLARATV-RAVDGVGHGAYHFSSGTDVAIKELYDAV 260

Query: 236 NK----RFPEYKVPTDF--GDFPSEAKLILSSEKLISE-GFCFKYGIEDIYDQTVEYLKT 288
            +             +    D PS   ++L   + I + G      +++     V Y + 
Sbjct: 261 VEAMALPSYPEPEIRELGPDDAPS---ILLDPSRTIQDFGKIEFTPLKETVAAAVAYFRE 317

Query: 289 KG 290
            G
Sbjct: 318 YG 319

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 16/132 (12%)

Query: 18  KIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTK 77
           +  + DL D  + +A ++  D + H+      S + P   +++  I G+ N+ +A     
Sbjct: 46  ECVQCDLADANAVNAMVAGCDGIVHLGG---ISVEKPFEQILQGNIIGLYNLYEAARAHG 102

Query: 78  TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACK 137
              R++  SS   +    Q      +                P   Y  SK   E  A  
Sbjct: 103 -QPRIVFASSNHTIGYYPQ---TERLGPDVPAR---------PDGLYGVSKCFGENLARM 149

Query: 138 FAQENNIDLITV 149
           +  +   +   V
Sbjct: 150 YFDKFGQETALV 161

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 58.1 bits (141), Expect = 7e-10
 Identities = 55/270 (20%), Positives = 97/270 (35%), Gaps = 46/270 (17%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVA--TPVNFSSDDPETDM 58
           N  ++  L++ ++    K  + D+ +    +   +  D V H A    V  S +DP T  
Sbjct: 67  NLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITS- 125

Query: 59  IKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEK 118
               I G +N+L A    K V+     +S++    +     GL   E             
Sbjct: 126 NATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDH----PGLPKVEDTIGK-------- 172

Query: 119 PPTWGYAASKTLAERAACKFAQENNIDLI-----TVIPSLMSGPSLTPDIPSSVALA--- 170
            P   YA +K + E  A  F++      I      V      G    P+   +  +    
Sbjct: 173 -PLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVF-----GRRQDPNGAYAAVIPKWT 226

Query: 171 ATLITGNDFLLNGLKGMQMLSGSIS--ISHVEDVCRAHIFLAEKES-ASGR-Y-ICCAVN 225
           +++I G+D  +NG        G  S    ++E+  +A++  A     A  + Y I     
Sbjct: 227 SSMIQGDDVYING-------DGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGR 279

Query: 226 TSVPELA----KFLNKRFPEYKVPTDFGDF 251
           TS+ +L       L +    Y     + DF
Sbjct: 280 TSLNQLFFALRDGLAENGVSYHREPVYRDF 309

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 54.9 bits (132), Expect = 8e-09
 Identities = 54/310 (17%), Positives = 93/310 (30%), Gaps = 57/310 (18%)

Query: 17  LKIFRADLTDEASFDAPISRS--DIVFHVA--TPVNFSSDDP-ETDMIKPAIQGVVNVLK 71
           ++    D+ D+      I     +IVFH+A    V  S  +P ET      + G V +L+
Sbjct: 59  MQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVET--YSTNVMGTVYLLE 116

Query: 72  ACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLA 131
           A      VK V+  +S                      +      +      Y+ SK  A
Sbjct: 117 AIRHVGGVKAVVNITSDKCYDNKEWI-------WGYRENEAMGGYDP-----YSNSKGCA 164

Query: 132 ERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDF----LLNGLKGM 187
           E     +                           +   A  +I G D+    ++  +   
Sbjct: 165 ELVTSSYRNSFFNP----------ANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRA 214

Query: 188 QMLSGSISIS---------HVEDVCRAHIFLAEKESASGRYICCAVN--------TSVPE 230
              S  + I          HV +    ++ LA+K    G       N        T V  
Sbjct: 215 FEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKN 274

Query: 231 LAKFLNKRFPE-YKVPTDFGDFPSEAK-LILSSEKLISE-GFCFKYGIEDIYDQTVE--- 284
           + + + K + E      D    P EA  L L   K   + G+  ++ +    +  V    
Sbjct: 275 IVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHK 334

Query: 285 -YLKTKGMLK 293
            +L    M +
Sbjct: 335 NWLSGTDMHE 344

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 44/306 (14%), Positives = 88/306 (28%), Gaps = 51/306 (16%)

Query: 5   ISPLIALQELGELKIFRADLTDEASFDAPIS-RSDIVFHVAT-PVNFSSDDPETDMIKPA 62
             P       G +    ADL+     +  +  R D++FH+A      +  D +    +  
Sbjct: 54  FQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGY-RIN 112

Query: 63  IQGVVNVLKAC----TKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEK 118
           + G   +  A      K     RV+ TSS A               ++  T         
Sbjct: 113 LDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPI----PDEFHTT-------- 160

Query: 119 PPTWGYAASKTLAERAACKFAQENNIDLITV-IPSLMSGPSLTPDIPSSVA--LAATLIT 175
            P   Y   K + E     +++    D I + +P++   P       S     +    + 
Sbjct: 161 -PLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLV 219

Query: 176 GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGR----YICCAVNTSVPEL 231
           G + +L   + ++        +         I  A  +              ++ +V E 
Sbjct: 220 GQEAVLPVPESIRH-----WHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQ 274

Query: 232 AKFLNK---RFPEYKVPTDFGDFPSEAKLILSS----------EKLISEGFCFKYGIEDI 278
            + L K         +  +  +       +              +L   GF  +   E+I
Sbjct: 275 IEALRKVAGEKAVALIRREPNEM---IMRMCEGWAPGFEAKRAREL---GFTAESSFEEI 328

Query: 279 YDQTVE 284
               +E
Sbjct: 329 IQVHIE 334

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 43/309 (13%), Positives = 91/309 (29%), Gaps = 71/309 (22%)

Query: 11  LQELGELKIFRADLTDEASFDAPISRS--DIVFHVATPVNF-SSDDPETDMIKPAIQGVV 67
              +        +  D    +  +       ++ +A  ++  +  +P        +  + 
Sbjct: 41  TDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFA-WDLNMNSLF 99

Query: 68  NVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP--PTWGYA 125
           +VL      K +K++   SS A                   T  E         P+  Y 
Sbjct: 100 HVLNLAKAKK-IKKIFWPSSIAVFGPT--------------TPKENTPQYTIMEPSTVYG 144

Query: 126 ASKTLAERAACKFAQENNIDLI-----TVIPSLMSGPSL-----TPDIPSSVALAATLIT 175
            SK   ER    +     +D+       +I       S      T D   +V +    I 
Sbjct: 145 ISKQAGERWCEYYHNIYGVDVRSIRYPGLI-----SWSTPPGGGTTDY--AVDIFYKAIA 197

Query: 176 GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGR----YICCAVNTSVPEL 231
              +        +M      + +++D   A I + +      +    Y   A++ +  E+
Sbjct: 198 DKKYECFLSSETKM-----PMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEI 252

Query: 232 AKFLNKRFPEYKV--------------PTDFGDFPSEAKLILSSEKLISEGFCFKYGIED 277
           A  + K  PE+ +              P    D  S+A+            +   + +E 
Sbjct: 253 ANEIKKHIPEFTITYEPDFRQKIADSWPASIDD--SQAREDW--------DWKHTFDLES 302

Query: 278 IYDQTVEYL 286
           +    +E+L
Sbjct: 303 MTKDMIEHL 311

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 52.7 bits (127), Expect = 5e-08
 Identities = 44/296 (14%), Positives = 84/296 (28%), Gaps = 60/296 (20%)

Query: 19  IFRADLTDEASFDAPISRSDIVFHVA----TPVNFSSDDPETDMIKPAIQGVVNVLKACT 74
           + + D   +          + +FH      T            M+    Q    +L  C 
Sbjct: 98  MDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTE--WDGKY---MMDNNYQYSKELLHYCL 152

Query: 75  KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERA 134
           + +     +  SSAA          G      +         EKP    +  SK L +  
Sbjct: 153 ERE--IPFLYASSAA--------TYG---GRTSDFIES-REYEKPLN-VFGYSKFLFDEY 197

Query: 135 ACKFAQENNIDLI-----TVIPSLMSGPSLTPDIP-SSVA---LAATLITGNDFLLNGLK 185
             +   E N  ++      V      GP        +SVA           +  L  G  
Sbjct: 198 VRQILPEANSQIVGFRYFNVY-----GPREGHKGSMASVAFHLNTQLNNGESPKLFEG-- 250

Query: 186 GMQMLSGSIS---ISHVEDVCRAHIFLAEKESASGRY-ICCAVNTSVPELAKFLNKRFPE 241
                S +     + +V DV   +++  E    SG + +      S   +A        +
Sbjct: 251 -----SENFKRDFV-YVGDVADVNLWFLENG-VSGIFNLGTGRAESFQAVADATLAYHKK 303

Query: 242 YKVPTDFGDFPSEAKLI------LSSEKLISEGFCF-KYGIEDIYDQTVEYLKTKG 290
            ++  ++  FP + K             L + G+      + +   + + +L    
Sbjct: 304 GQI--EYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA 357

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 52.2 bits (126), Expect = 5e-08
 Identities = 45/295 (15%), Positives = 85/295 (28%), Gaps = 58/295 (19%)

Query: 19  IFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETD---MIKPAIQGVVNVLKACTK 75
           + + D   +          + +FH        S   E D   M+    Q    +L  C +
Sbjct: 51  MDKEDFLIQIMAGEEFGDVEAIFHEGAC----SSTTEWDGKYMMDNNYQYSKELLHYCLE 106

Query: 76  TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAA 135
            +     +  SSAA          G      +          + P   Y  SK L +   
Sbjct: 107 REI--PFLYASSAA--------TYG---GRTSDFIES--REYEKPLNVYGYSKFLFDEYV 151

Query: 136 CKFAQENNIDLI-----TVIPSLMSGPSLTPDIP-SSVA---LAATLITGNDFLLNGLKG 186
            +   E N  ++      V      GP        +SVA           +  L  G   
Sbjct: 152 RQILPEANSQIVGFRYFNV-----YGPREGHKGSMASVAFHLNTQLNNGESPKLFEG--- 203

Query: 187 MQMLSGSIS---ISHVEDVCRAHIFLAEKESASGRY-ICCAVNTSVPELAKFLNKRFPEY 242
               S +     + +V DV   +++  E    SG + +      S   +A        + 
Sbjct: 204 ----SENFKRDFV-YVGDVADVNLWFLENG-VSGIFNLGTGRAESFQAVADATLAYHKKG 257

Query: 243 KVPTDFGDFPSEAK------LILSSEKLISEGFCF-KYGIEDIYDQTVEYLKTKG 290
           ++  ++  FP + K             L + G+      + +   + + +L    
Sbjct: 258 QI--EYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA 310

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 50.4 bits (120), Expect = 1e-07
 Identities = 32/202 (15%), Positives = 62/202 (30%), Gaps = 39/202 (19%)

Query: 17  LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT 76
           + I + D+ D    D  +S  ++V         S D+ E       +  + +++     T
Sbjct: 44  INILQKDIFDLTLSD--LSDQNVVVDAY---GISPDEAEKH-----VTSLDHLISVLNGT 93

Query: 77  KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAAC 136
               R+++   AA++ I+    T           +      +   +   A     +    
Sbjct: 94  V-SPRLLVVGGAASLQIDEDGNT-----------LLESKGLREAPYYPTARAQAKQLEHL 141

Query: 137 KFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISI 196
           K + +       + PS M  P                  G D LL G  G   +S     
Sbjct: 142 K-SHQAEFSWTYISPSAMFEPG---------ERTGDYQIGKDHLLFGSDGNSFIS----- 186

Query: 197 SHVEDVCRAHIFLAEKESASGR 218
             +ED   A +   E+ +    
Sbjct: 187 --MEDYAIAVLDEIERPNHLNE 206

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 49.5 bits (119), Expect = 4e-07
 Identities = 44/256 (17%), Positives = 79/256 (30%), Gaps = 67/256 (26%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATP--VNFSSDDPETDM 58
                       E   L++   DL+D            +V+H+A+   V  S   P   +
Sbjct: 44  PMIPPEGTGKFLEKPVLELEERDLSD----------VRLVYHLASHKSVPRSFKQPLDYL 93

Query: 59  IKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLS-SE 117
               +    ++L  CT    V +V++ S+          V G           + L   E
Sbjct: 94  D--NVDSGRHLLALCTSVG-VPKVVVGSTCE--------VYG---------QADTLPTPE 133

Query: 118 KPPTWG---YAASKTLAERAACKFAQENNIDLITVI-PSLMSGPSLTPDIPSSVALAATL 173
             P      YAASK   E  A    + +    + ++    + GP   PD     AL   L
Sbjct: 134 DSPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD-----ALVPRL 188

Query: 174 ITGNDFLLNGLKGMQMLSG-SISI----------SHVEDVCRAHIFLAEKESASGRY-IC 221
                          +L+   + +          +++ DV    + LA +          
Sbjct: 189 CA------------NLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRP-LPSVVNFG 235

Query: 222 CAVNTSVPELAKFLNK 237
              + SV ++ + L  
Sbjct: 236 SGQSLSVNDVIRILQA 251

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 51/252 (20%), Positives = 95/252 (37%), Gaps = 42/252 (16%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVA--TPVNFSSDDPETDM 58
           N  ++  L++ ++         D+ D  + +  +   D V H A    V  S  DP T  
Sbjct: 65  NLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITT- 123

Query: 59  IKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEK 118
               I G +N+L A    + V+     +S++    +      L   E+N  +        
Sbjct: 124 NATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDH----PALPKVEENIGN-------- 170

Query: 119 PPTWGYAASKTLAERAACKFAQENNIDLI-----TVIPSLMSGPSLTPDIPSSVAL---A 170
            P   YA +K + E  A  +A+      I      V      G    P+   +  +    
Sbjct: 171 -PLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVF-----GRRQDPNGAYAAVIPKWT 224

Query: 171 ATLITGNDFLLNGLKGMQMLSGSIS--ISHVEDVCRAHIFLA-EKESASGR-Y-ICCAVN 225
           A ++ G+D  +NG        G  S    ++++V + +I  A  K+SA    Y +     
Sbjct: 225 AAMLKGDDVYING-------DGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDR 277

Query: 226 TSVPELAKFLNK 237
           T++ EL+ ++  
Sbjct: 278 TTLNELSGYIYD 289

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 49.0 bits (117), Expect = 7e-07
 Identities = 50/269 (18%), Positives = 96/269 (35%), Gaps = 37/269 (13%)

Query: 11  LQELGELKIFRADLTDEASFDAP-ISRSDIVFH---VATPVNFSSDDPETDMIKPAIQGV 66
           L +   +  F  D+T    +    + + D++     +ATP  +          +   +  
Sbjct: 65  LVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRV--FELDFEAN 122

Query: 67  VNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVE--FLSSEKPPTWGY 124
           + ++++  K    K ++  S++         V G+  DE+   D           P W Y
Sbjct: 123 LPIVRSAVKYG--KHLVFPSTSE--------VYGMCADEQFDPDASALTYGPINKPRWIY 172

Query: 125 AASKTLAERAACKFAQEN-NIDLI----TVIPSLMSGPSLTPDIPSSVA-LAATLITGND 178
           A SK L +R    +  E  N  L      + P L S  +        V      ++ G +
Sbjct: 173 ACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEN 232

Query: 179 FLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRYICC---AVNTSVPELAK 233
             L    G Q      + ++V+D   A + + E  +  A+G+         N SV ELA 
Sbjct: 233 ISLVD-GGSQ----KRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELAN 287

Query: 234 FLNKRFPEYKVPTDFGDFPSEAKLILSSE 262
            + +         ++ D     KL+ ++ 
Sbjct: 288 KMLELA---AEFPEYADSAKRVKLVETTS 313

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 37/279 (13%), Positives = 71/279 (25%), Gaps = 65/279 (23%)

Query: 20  FRADLTDEASFDA-PISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKT 78
             AD+T   +  +    R +I+ +      +S +          ++G+ N L A      
Sbjct: 46  LIADVTRPDTLASIVHLRPEILVYCVAASEYSDEHYR----LSYVEGLRNTLSALEGAP- 100

Query: 79  VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKF 138
           ++ V   SS               +DE          +              AE      
Sbjct: 101 LQHVFFVSSTGV----YGQEVEEWLDE---------DTPPIAKDFSGKRMLEAEALL--- 144

Query: 139 AQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGS---IS 195
                     +  S + GP                  G   ++   +  +         +
Sbjct: 145 ---AAYSSTILRFSGIYGP------------------GRLRMIRQAQTPEQWPARNAWTN 183

Query: 196 ISHVEDVCRAHIFLAEKESASGR---YICCAVNTS-----VPELAKFLNKRFPEYKVPTD 247
             H +D      +L ++ S +     YI            +  LA            P  
Sbjct: 184 RIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQG-----IAYPAG 238

Query: 248 FGDFPSEAKLILSSEKLISEGFCFKY-----GIEDIYDQ 281
                   K  LS+ +L++ G+   Y     G   +   
Sbjct: 239 ATPPVQGNK-KLSNARLLASGYQLIYPDYVSGYGALLAA 276

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 54/291 (18%), Positives = 99/291 (34%), Gaps = 60/291 (20%)

Query: 18  KIFRADLTDEASFDAPISRS-DIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT 76
           ++  AD+ +            D +FH A   + +  + E  M K   Q  +N+L+     
Sbjct: 71  EVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVM-KTNYQAFLNLLEIARSK 129

Query: 77  KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAAC 136
           K   +VI  SSA         V G   + K    V    +E P    Y  SK   +    
Sbjct: 130 K--AKVIYASSAG--------VYG---NTKAPNVVG--KNESPEN-VYGFSKLCMDEFV- 172

Query: 137 KFAQENNIDLI-----TVIPSLMSGPSLTPDIP-SSVA--LAATLITGNDFLLNGLKGMQ 188
             +  N+   +      V      GP        +S+   LA   +   +  L    G Q
Sbjct: 173 -LSHSNDNVQVGLRYFNVY-----GPREFYKEKTASMVLQLALGAMAFKEVKLFE-FGEQ 225

Query: 189 MLSGSISIS----HVEDVCRAHIFLAEKESASGRY-ICCAVNTSVPELAKFLNKRFPEYK 243
                        ++EDV +A++   + +  SG Y +  +   S  E+   L +   ++K
Sbjct: 226 --------LRDFVYIEDVIQANVKAMKAQ-KSGVYNVGYSQARSYNEIVSILKEHLGDFK 276

Query: 244 VPTDFGDFP-------SEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLK 287
           V   +   P       ++A +  +   L    +   Y +E      + ++ 
Sbjct: 277 VT--YIKNPYAFFQKHTQAHIEPTILDL---DYTPLYDLESGIKDYLPHIH 322

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 45.0 bits (107), Expect = 7e-06
 Identities = 15/92 (16%), Positives = 28/92 (30%), Gaps = 9/92 (9%)

Query: 17  LKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT 76
             +   D+   A  D  ++  D V  +    N               +G  N++ A    
Sbjct: 48  AHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN-DLSPTTVMS-----EGARNIVAAMKAH 101

Query: 77  KTVKRVILTSSAAAV--SINAQNVTGLVMDEK 106
             V +V+  +SA  +            V D+ 
Sbjct: 102 G-VDKVVACTSAFLLWDPTKVPPRLQAVTDDH 132

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 41/316 (12%), Positives = 86/316 (27%), Gaps = 62/316 (19%)

Query: 16  ELKIFRADLTDEASFDAPISRSDI--VFHVA--TPVNFSSDDPETDMIKPA------IQG 65
            ++++  D+ D           +   V H        +S  D      +        + G
Sbjct: 78  SIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRS----RAVYTQHNNVIG 133

Query: 66  VVNVLKACTKTKTVKRVILTSSAAA-----VSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
            +NVL A  +      ++   +        + I    +T   +     TD      +   
Sbjct: 134 TLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYIT---ITHNGRTDTLPYPKQ--A 188

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
           +  Y  SK           +   I    +   ++ G            +   L    D+ 
Sbjct: 189 SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDE-----TEMHEELRNRLDY- 242

Query: 181 LNGLKG-------MQMLSG-SISI----------SHVEDVCRAHIFLAEKESASGRYICC 222
            + + G       +Q   G  +++            + D  +         + +G +   
Sbjct: 243 -DAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEF--R 299

Query: 223 AVN-----TSVPELAKFLNKRFPEYKVPTDFGDFPS------EAKLILSSEKLISEGFCF 271
             N      SV ELA  + K   +  +       P+      E        KL+  G   
Sbjct: 300 VFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEP 359

Query: 272 KYGIEDIYDQTVEYLK 287
            Y  + + D  + +  
Sbjct: 360 HYLSDSLLDSLLNFAV 375

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 23/144 (15%), Positives = 54/144 (37%), Gaps = 29/144 (20%)

Query: 18  KIFRADLTDEASFDAP-ISRSDIVFH---VATPVNFSSDDPETDMIKPAIQGVVNVLKAC 73
                D++  + +    + + D+V     +ATP+ ++ +       +   +  + +++ C
Sbjct: 48  HFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRV--FELDFEENLRIIRYC 105

Query: 74  TKTKTVKRVILTSSAAAVS-------INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAA 126
            K +  KR+I  S+    S                  DE +   +  +     P W Y+ 
Sbjct: 106 VKYR--KRIIFPST----SEVYGMCSDKYF-------DEDHSNLI--VGPVNKPRWIYSV 150

Query: 127 SKTLAERAACKFAQENNIDLITVI 150
           SK L +R    + ++  +   T+ 
Sbjct: 151 SKQLLDRVIWAYGEKEGLQ-FTLF 173

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 28/168 (16%), Positives = 48/168 (28%), Gaps = 21/168 (12%)

Query: 12  QELGELKIFRADLTDEASFDAPISRSDIVFHVATPV---NFSSDDPETDMIKPAIQGVVN 68
           +++   +    DL    +        D VF++A  +    F   +    M         N
Sbjct: 69  EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIM-YNNTMISFN 127

Query: 69  VLKACTKTKTVKRVILTSSAAA---VSINAQNVTGLVMDEKNWTDVEFLSSEKP--PTWG 123
           +++A      +KR    SSA               L       +D        P  P   
Sbjct: 128 MIEAARING-IKRFFYASSACIYPEFKQLETTNVSL-----KESDAW------PAEPQDA 175

Query: 124 YAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAA 171
           +   K   E     + ++  I+        + GP  T       A AA
Sbjct: 176 FGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAA 223

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 42.8 bits (101), Expect = 7e-05
 Identities = 15/95 (15%), Positives = 28/95 (29%), Gaps = 25/95 (26%)

Query: 198 HVEDVCRAHIFLAEKESASGRYICCAVNTSVPE----------LAKFLNK----RFPEYK 243
            ++D+   +         SG      +N   P           LA  +++    + P   
Sbjct: 341 AIDDLTDIYYRAIVDAQISG-----PINAVAPNPVSNADMTKILATSMHRPAFIQIPSLG 395

Query: 244 VPTDFGDFPSEAKLILSS-----EKLISEGFCFKY 273
                G      +L L+S       L +    F+Y
Sbjct: 396 PKILLGSQ-GAEELALASQRTAPAALENLSHTFRY 429

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 46/247 (18%), Positives = 91/247 (36%), Gaps = 37/247 (14%)

Query: 34  ISRSDIVFH---VATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA 90
           + + D+V     +ATP+ ++ + P   + +   +  + +++ C K +  KR+I  S++  
Sbjct: 380 VKKCDVVLPLVAIATPIEYTRN-P-LRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEV 435

Query: 91  VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVI 150
                   +    DE +   +  +     P W Y+ SK L +R    + ++  +      
Sbjct: 436 YG----MCSDKYFDEDHSNLI--VGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFR 489

Query: 151 PSLMSGPSL----TPDIPSSVALAATLITGNDFLLNGLKG--MQMLSGSI---SISHVED 201
           P    GP L       I SS A+          +LN ++G  ++++ G       + + D
Sbjct: 490 PFNWMGPRLDNLNAARIGSSRAIT-------QLILNLVEGSPIKLIDGGKQKRCFTDIRD 542

Query: 202 VCRA--HIFLAEKESASGRYICC---AVNTSVPELAKFLNKRFPEYKVPTDFGDFPSEAK 256
              A   I         G  I         S+ EL + L   F ++ +      FP  A 
Sbjct: 543 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL---RHHFPPFAG 599

Query: 257 LILSSEK 263
             +    
Sbjct: 600 FRVVESS 606

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 33/211 (15%), Positives = 64/211 (30%), Gaps = 57/211 (27%)

Query: 11  LQELGELKIFRADLT-DEASFDAPISRSDIVFHVATPVNFSSDDPET-DMIKPAIQGVVN 68
           + +   +K    D+          +   D + +V+             D+      G V 
Sbjct: 37  VPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSG---SGGKSLLKVDL-----YGAVK 88

Query: 69  VLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASK 128
           +++A  K + VKR IL S+  +            +  + W    F          Y  +K
Sbjct: 89  LMQAAEKAE-VKRFILLSTIFS------------LQPEKWIGAGF-----DALKDYYIAK 130

Query: 129 TLAERAACKFAQENNIDLITVIPS-LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGM 187
             A+       +E N+D   + P  L    +                TG   + +     
Sbjct: 131 HFADLYL---TKETNLDYTIIQPGALTEEEA----------------TGLIDINDE---- 167

Query: 188 QMLSGSISISHVEDVCRAHIFLAEKESASGR 218
             +S S +   + DV      L   + + G+
Sbjct: 168 --VSASNT---IGDVADTIKELVMTDHSIGK 193

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 5/91 (5%)

Query: 17  LKIFRADLTDEASFDAPISRSDIVFHVAT--PVNFSSDDPETDMIKPAIQGVVNVLKACT 74
           ++ F  D+ D    +  +   DI  H A    V  +  +P  + IK  I G  NV+ AC 
Sbjct: 72  MRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNP-LECIKTNIMGASNVINACL 130

Query: 75  KTKTVKRVILTSSAAAVS-INAQNVTGLVMD 104
           K   + +VI  S+  A + IN    T L  D
Sbjct: 131 KNA-ISQVIALSTDKAANPINLYGATKLCSD 160

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 47/301 (15%), Positives = 107/301 (35%), Gaps = 74/301 (24%)

Query: 18  KIFRADLTDEASFDAPISRSDIVFHVA---TPVNFSSDDPETDMIKPAIQGVVNVLKACT 74
           ++   D+ +    +      D ++H+A   +P N+  +  +T  +K    G +N+L    
Sbjct: 78  ELINHDVVEPLYIEV-----DQIYHLASPASPPNYMYNPIKT--LKTNTIGTLNMLGLAK 130

Query: 75  KTKTVKRVILTSSA---AAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLA 131
           +     R++L S++       ++ Q+       E  W  V    +   P   Y   K +A
Sbjct: 131 RVG--ARLLLASTSEVYGDPEVHPQS-------EDYWGHV----NPIGPRACYDEGKRVA 177

Query: 132 ERAACKFAQENNIDLITVIPSLMS--GPSLTPD----IPSSVALAATLITGNDFLLNGLK 185
           E     + ++  ++    +  + +  GP +  +    + + +  A   + G    + G  
Sbjct: 178 ETMCYAYMKQEGVE--VRVARIFNTFGPRMHMNDGRVVSNFILQA---LQGEPLTVYG-S 231

Query: 186 GMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVN------TSVPELAKFLNKRF 239
           G Q    + +  +V D+    + L     +S       VN       ++ E A+ + K  
Sbjct: 232 GSQ----TRAFQYVSDLVNGLVALMNSNVSS------PVNLGNPEEHTILEFAQLI-KNL 280

Query: 240 PEYKVPTDFGDFPSE-----------AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKT 288
                   F     +           AKL+L        G+     +E+  ++ + Y + 
Sbjct: 281 VGSGSEIQFLSEAQDDPQKRKPDIKKAKLML--------GWEPVVPLEEGLNKAIHYFRK 332

Query: 289 K 289
           +
Sbjct: 333 E 333

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	293
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.98
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.98
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.98
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.97
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.97
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.97
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.95
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.95
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.95
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.94
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.94
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.93
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.93
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.92
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.92
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.92
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.92
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.91
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.91
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.89
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.88
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.88
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.87
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.86
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.84
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.83
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.83
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.82
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.8
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.78
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.76
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.76
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.75
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.75
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.72
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.71
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.71
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.7
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.69
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.69
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.65
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.64
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.64
1spx_A	278	Short-chain reductase family member (5L265); paral	99.62
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.6
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.58
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.58
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.58
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.57
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.57
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.56
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.56
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.56
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.56
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.55
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.55
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.54
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.54
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.54
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.54
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.54
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.53
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.53
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.53
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.52
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.52
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.52
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.52
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.52
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.52
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.51
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.51
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.51
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.5
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.5
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.5
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.5
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.5
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.5
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.5
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.49
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.49
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.48
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.48
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.48
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.48
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.48
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.48
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.48
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.48
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.47
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.47
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.47
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.47
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.46
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.46
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.46
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.46
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.46
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.46
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.46
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.46
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.45
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.45
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.45
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.45
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.45
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.44
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.44
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.44
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.44
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.44
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.44
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.44
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.43
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.43
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.43
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.42
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.42
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.42
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.42
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.42
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.42
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.42
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.42
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.42
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.42
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.41
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.41
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.41
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.41
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.41
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.41
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.41
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.41
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.4
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.4
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.4
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.4
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.4
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.4
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.4
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.4
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.4
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.4
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.39
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.39
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.39
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.39
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.39
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.39
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.39
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.38
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.38
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.38
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.38
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.38
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.37
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.37
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.37
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.37
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.37
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.37
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.37
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.36
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.36
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.36
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.36
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.36
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.36
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.36
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.35
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.35
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.35
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.35
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.35
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.35
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.35
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.34
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.34
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.34
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.34
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.34
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.34
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.33
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.33
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.33
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.33
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.32
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.32
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.32
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.32
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.32
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.32
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.31
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.31
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.31
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.3
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.3
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.3
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.3
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.29
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.29
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.29
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.28
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.27
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.27
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.27
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.27
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.27
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.26
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.25
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.25
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.25
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.25
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.25
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.25
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.24
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.24
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.23
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.22
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.22
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.2
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.19
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.19
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.19
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.19
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.17
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.15
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.15
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.15
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.14
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.13
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.12
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.11
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.09
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.06
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.05
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.04
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.02
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	98.99
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.99
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	98.98
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.97
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	98.96
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	98.92
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.88
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	98.84
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	98.83
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	98.81
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	98.69
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	98.65
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	98.58
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	98.49
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.4
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.34
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.03
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.87
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	97.85
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.8
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.8
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	97.75
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.67
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	96.85
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	96.76
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	96.65
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	96.29
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	96.04
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	94.75
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	94.1
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	92.41
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	91.7
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	90.16
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	88.37
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	85.54
2jyc_A	160	Uncharacterized protein C6ORF130; macro domain, A1	85.37
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	83.65
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	83.09
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	82.97
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	82.73
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	81.85
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	81.72
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	80.5
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	80.39

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=3.6e-39  Score=272.71  Aligned_cols=278  Identities=77%  Similarity=1.241  Sum_probs=198.6

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++++++++|++|++.+.++++++|+|||+|+.......++..++++.|+.++.+++++|++.+.+++|||+||.+++++.
T Consensus        59 ~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~  138 (338)
T 2rh8_A           59 GDLKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTIN  138 (338)
T ss_dssp             SCEEEEECCTTTSSSSHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHH
T ss_pred             CcEEEEecCCCChHHHHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecC
Confidence            46899999999999999999999999999997643323443258999999999999999988448999999998756543


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCC-CchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPP-TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p-~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                      .......+++|+.|....+.. +..| .+.|+.+|..+|.+++.+++++|++++++||++||||+........+..+...
T Consensus       139 ~~~~~~~~~~E~~~~~~~~~~-~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~  217 (338)
T 2rh8_A          139 QLDGTGLVVDEKNWTDIEFLT-SAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSL  217 (338)
T ss_dssp             HHTCSCCCCCTTTTTCC--------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHH
T ss_pred             CcCCCCcccChhhccchhhcc-ccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHH
Confidence            321101267888754432110 1122 23699999999999999887779999999999999998765433333333333


Q ss_pred             HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 035985          174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPS  253 (293)
Q Consensus       174 ~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~  253 (293)
                      +.+....+....+.+..++.++|+|++|+|++++.+++++..+++|++++..+|++|+++.+.+.++...+|..+.+.+.
T Consensus       218 ~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~~~~~~~~~  297 (338)
T 2rh8_A          218 ITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPP  297 (338)
T ss_dssp             HHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCCCCCTTSCS
T ss_pred             HcCCccccccccccccccCcccEEEHHHHHHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCCc
Confidence            44543322111111101234589999999999999998766667898877779999999999999875555544433322


Q ss_pred             ccccccchHHHHhcCCccccCHHHHHHHHHHHHHHcCCCC
Q 035985          254 EAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK  293 (293)
Q Consensus       254 ~~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~~~~  293 (293)
                      .....+|++|+++|||+|+++++++|+++++|+++.|++|
T Consensus       298 ~~~~~~d~~k~~~lG~~p~~~l~~gl~~~~~~~~~~~~~~  337 (338)
T 2rh8_A          298 KSKLIISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLLQ  337 (338)
T ss_dssp             SCSCCCCCHHHHHHTCCCSCCHHHHHHHHHHHHHHTTCC-
T ss_pred             CcceeechHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            2347899999966999999999999999999999998875

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=1.1e-38  Score=270.52  Aligned_cols=255  Identities=16%  Similarity=0.204  Sum_probs=202.7

Q ss_pred             CCCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccc
Q 035985           14 LGELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAA   89 (293)
Q Consensus        14 ~~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~   89 (293)
                      .++++++++|++|++.+.+++++  +|+|||+|+.....  ..++. .+++.|+.++.+++++|++.+ +++|||+||.+
T Consensus        74 ~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~  151 (346)
T 4egb_A           74 HPNYYFVKGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPI-PFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDE  151 (346)
T ss_dssp             CTTEEEEECCTTCHHHHHHHHHHHTCCEEEECCCCC---------C-HHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGG
T ss_pred             CCCeEEEEcCCCCHHHHHHHHhhcCCCEEEECCcccchhhhhhCHH-HHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchH
Confidence            36899999999999999999986  99999999986522  23455 889999999999999999998 99999999997


Q ss_pred             hhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHH
Q 035985           90 AVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVAL  169 (293)
Q Consensus        90 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~  169 (293)
                       +|+.....  .+++|++         +..|.+.|+.+|..+|.+++.++++++++++++||+++||++..+.  ..+..
T Consensus       152 -vy~~~~~~--~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~  217 (346)
T 4egb_A          152 -VYGSLGKT--GRFTEET---------PLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE--KLIPL  217 (346)
T ss_dssp             -GGCCCCSS--CCBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT--SHHHH
T ss_pred             -HhCCCCcC--CCcCCCC---------CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc--chHHH
Confidence             55544322  5788988         7788899999999999999999988899999999999999987543  34444


Q ss_pred             HHHH-HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCC
Q 035985          170 AATL-ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTD  247 (293)
Q Consensus       170 ~~~~-~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~  247 (293)
                      ++.. ..+....+.+.+     +..++|+|++|+|++++.+++.+..+++|++ +++.+|+.|+++.+++.+|.......
T Consensus       218 ~~~~~~~~~~~~~~~~~-----~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  292 (346)
T 4egb_A          218 MVTNALEGKKLPLYGDG-----LNVRDWLHVTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIE  292 (346)
T ss_dssp             HHHHHHTTCCCEEETTS-----CCEECEEEHHHHHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCE
T ss_pred             HHHHHHcCCCceeeCCC-----CeEEeeEEHHHHHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCccccc
Confidence            4444 455554444332     3468999999999999999998877779977 56789999999999999985322122


Q ss_pred             CCC-CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          248 FGD-FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       248 ~~~-~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +.. .+.. ....+|++|+++ |||+|+++++++|+++++|++++
T Consensus       293 ~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  337 (346)
T 4egb_A          293 YVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKN  337 (346)
T ss_dssp             EECC--CCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCCCcceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence            111 1111 556799999997 99999999999999999999986

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=4.4e-38  Score=263.02  Aligned_cols=251  Identities=14%  Similarity=0.144  Sum_probs=203.3

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccc
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINA   95 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~   95 (293)
                      +++++.+|++ ++++.++++++|+|||+|+.....  ++. ..++.|+.++.+++++|++.+ +++|||+||.+ +|+..
T Consensus        43 ~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~--~~~-~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~-vyg~~  116 (311)
T 3m2p_A           43 DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ--GKI-SEFHDNEILTQNLYDACYENN-ISNIVYASTIS-AYSDE  116 (311)
T ss_dssp             CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS--SCG-GGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGG-GCCCG
T ss_pred             ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC--ChH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHH-HhCCC
Confidence            7899999999 999999999999999999987644  555 889999999999999999998 99999999987 56544


Q ss_pred             cCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH-
Q 035985           96 QNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI-  174 (293)
Q Consensus        96 ~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-  174 (293)
                      ..   .+++|++         +..|.+.|+.+|..+|++++.++.+.+++++++||+++||++..+.  ..+..++..+ 
T Consensus       117 ~~---~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~  182 (311)
T 3m2p_A          117 TS---LPWNEKE---------LPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN--YMINRFFRQAF  182 (311)
T ss_dssp             GG---CSBCTTS---------CCCCSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C--CHHHHHHHHHH
T ss_pred             CC---CCCCCCC---------CCCCCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC--CHHHHHHHHHH
Confidence            32   5788887         7788899999999999999999998899999999999999987653  3445554444 


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCC-CC-C
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDF-GD-F  251 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~-~~-~  251 (293)
                      .+....+.+.+     +..++|+|++|+|++++.+++++..+++|++ +++.+|++|+++.+++.+|... +... +. .
T Consensus       183 ~~~~~~~~g~~-----~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~  256 (311)
T 3m2p_A          183 HGEQLTLHANS-----VAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKD-NLLVKNPNA  256 (311)
T ss_dssp             TCCCEEESSBC-----CCCEEEEEHHHHHHHHHHHTTCTTCCEEEEECCSCEECHHHHHHHHHHHTTCTT-CEEECSSSB
T ss_pred             cCCCeEEecCC-----CeEEceEEHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCC-cceecCCCC
Confidence            45555444333     4579999999999999999998876779977 6788999999999999998532 2221 11 1


Q ss_pred             Ccc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcCCC
Q 035985          252 PSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKGML  292 (293)
Q Consensus       252 ~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~~~  292 (293)
                      ... ....+|++|+++ |||+|+++++++|+++++|+++.+-.
T Consensus       257 ~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~  299 (311)
T 3m2p_A          257 NEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDDV  299 (311)
T ss_dssp             CCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC----
T ss_pred             CCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhcccC
Confidence            112 678899999998 99999999999999999999987654

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=2.9e-38  Score=267.00  Aligned_cols=269  Identities=43%  Similarity=0.790  Sum_probs=202.2

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccc
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINA   95 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~   95 (293)
                      +++++++|++|++++.++++++|+|||+|+.......++...+++.|+.++.+++++|++.+.+++|||+||.+++|+..
T Consensus        57 ~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~  136 (337)
T 2c29_D           57 HLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQE  136 (337)
T ss_dssp             HEEEEECCTTSTTTTHHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSS
T ss_pred             eEEEEEcCCCCHHHHHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCC
Confidence            58899999999999999999999999999876433233332578999999999999999875578999999987676543


Q ss_pred             cCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHHh
Q 035985           96 QNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLIT  175 (293)
Q Consensus        96 ~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~  175 (293)
                      ...  .+++|+.|....+......|.+.|+.+|..+|.+++.++++++++++++||++||||+........+......+.
T Consensus       137 ~~~--~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~  214 (337)
T 2c29_D          137 HQL--PVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPIT  214 (337)
T ss_dssp             SCC--SEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHH
T ss_pred             CCC--cccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHc
Confidence            322  467888765433211111255689999999999999988767999999999999999865443222222212233


Q ss_pred             CCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCCCCCcc-
Q 035985          176 GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPSE-  254 (293)
Q Consensus       176 ~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~-  254 (293)
                      +....+....       ...|+|++|+|++++.+++++..+++|++++..+|++|+++.+.+.++...++..+.+.... 
T Consensus       215 g~~~~~~~~~-------~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~  287 (337)
T 2c29_D          215 GNEAHYSIIR-------QGQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENL  287 (337)
T ss_dssp             TCGGGHHHHT-------EEEEEEHHHHHHHHHHHHHCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCCSCCTTCCTTC
T ss_pred             CCCccccccC-------CCCEEEHHHHHHHHHHHhcCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCcccCCC
Confidence            4332221111       24599999999999999987666678888777799999999999998755555444332222 


Q ss_pred             cccccchHHHHhcCCccccCHHHHHHHHHHHHHHcCCCC
Q 035985          255 AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK  293 (293)
Q Consensus       255 ~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~~~~  293 (293)
                      ....+|++|+++|||+|+++++++++++++|+++.|+++
T Consensus       288 ~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~  326 (337)
T 2c29_D          288 KSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLP  326 (337)
T ss_dssp             CCCEECCHHHHHHTCCCCCCHHHHHHHHHHHHHHTTSSC
T ss_pred             ccccccHHHHHHcCCCcCCCHHHHHHHHHHHHHHcCCCC
Confidence            556789999966999999999999999999999998875

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=1.4e-37  Score=261.24  Aligned_cols=265  Identities=37%  Similarity=0.670  Sum_probs=196.7

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcC-CCccEEEEecccchhccc
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT-KTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~   94 (293)
                      +++++.+|++|++++.++++++|+|||+|+.......++...+++.|+.++.+++++|++. + +++|||+||.+++++.
T Consensus        54 ~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~  132 (322)
T 2p4h_X           54 KLHFFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFN  132 (322)
T ss_dssp             HEEECCCCTTCGGGGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCS
T ss_pred             ceEEEecCCCCHHHHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccC
Confidence            5788999999999999999999999999976533323333258999999999999999988 6 8999999998766654


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCc-hhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTW-GYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~-~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                      ....  .+++|+.|....+.. +..|.. .|+.+|..+|.+++++++.++++++++||+++||+.........+..+...
T Consensus       133 ~~~~--~~~~e~~~~~~~~~~-~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~  209 (322)
T 2p4h_X          133 GKDK--DVLDESDWSDVDLLR-SVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVL  209 (322)
T ss_dssp             SSCC--SEECTTCCCCHHHHH-HHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHH
T ss_pred             CCCC--eecCCccccchhhhc-ccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHH
Confidence            3222  467887754432210 112333 699999999999999888789999999999999998654332222222233


Q ss_pred             HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCCC--CCCC
Q 035985          174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTD--FGDF  251 (293)
Q Consensus       174 ~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~--~~~~  251 (293)
                      +.+....+.. .       .++|+|++|+|++++.+++.+...|.|+++++.+|++|+++.+.+.++...+|..  +...
T Consensus       210 ~~g~~~~~~~-~-------~~~~i~v~Dva~a~~~~~~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~  281 (322)
T 2p4h_X          210 VLGKKEQIGV-T-------RFHMVHVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEI  281 (322)
T ss_dssp             HHSCGGGCCE-E-------EEEEEEHHHHHHHHHHHHHSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTC
T ss_pred             HhCCCccCcC-C-------CcCEEEHHHHHHHHHHHhhCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCCCCccccCC
Confidence            4454332222 1       3589999999999999998765556788878889999999999998875455443  2222


Q ss_pred             CcccccccchHHHHhcCCccccCHHHHHHHHHHHHHHcCCC
Q 035985          252 PSEAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML  292 (293)
Q Consensus       252 ~~~~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~~~  292 (293)
                      .......+|++|+++|||+|+++++++++++++|++++|+|
T Consensus       282 ~~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~~~~  322 (322)
T 2p4h_X          282 KGARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL  322 (322)
T ss_dssp             CCEECCEECCHHHHHTTCCCCCCHHHHHHHHHHHHHHHTCC
T ss_pred             CCCcceecccHHHHHhCCccCCCHHHHHHHHHHHHHhcCCC
Confidence            22245778999996699999999999999999999998875

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=5.5e-38  Score=266.77  Aligned_cols=255  Identities=18%  Similarity=0.209  Sum_probs=203.0

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++++|++|++.+.++++++|+|||+|+....  ...++. ..++.|+.++.+++++|++.+ +++|||+||.+ +|
T Consensus        79 ~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~-vy  155 (351)
T 3ruf_A           79 SRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPI-TTNATNITGFLNILHAAKNAQ-VQSFTYAASSS-TY  155 (351)
T ss_dssp             TTEEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGG-GG
T ss_pred             CceEEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHH-hc
Confidence            47999999999999999999999999999997541  122344 788999999999999999998 99999999997 55


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC--ccHHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP--SSVALA  170 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~--~~~~~~  170 (293)
                      +....   .+++|+.         +..|.+.|+.+|..+|++++.++++++++++++||+++||++..+...  ..+..+
T Consensus       156 g~~~~---~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~  223 (351)
T 3ruf_A          156 GDHPA---LPKVEEN---------IGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKW  223 (351)
T ss_dssp             TTCCC---SSBCTTC---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHH
T ss_pred             CCCCC---CCCccCC---------CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHH
Confidence            54432   5788887         678889999999999999999998889999999999999998765422  344444


Q ss_pred             HH-HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc--CCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCC-
Q 035985          171 AT-LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK--ESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVP-  245 (293)
Q Consensus       171 ~~-~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~--~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~-  245 (293)
                      +. ...+....+.+.+     +..++|+|++|+|++++.++..  ...+++||+ +++.+|++|+++.+++.+|..... 
T Consensus       224 ~~~~~~~~~~~~~g~g-----~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~  298 (351)
T 3ruf_A          224 TAAMLKGDDVYINGDG-----ETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHID  298 (351)
T ss_dssp             HHHHHHTCCCEEESSS-----CCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-
T ss_pred             HHHHHcCCCcEEeCCC-----CeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccc
Confidence            44 4455555444433     4468999999999999999887  335668977 678999999999999998852211 


Q ss_pred             ---CCCCCC-Ccc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          246 ---TDFGDF-PSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       246 ---~~~~~~-~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                         ..+... +.. ....+|++|+++ |||+|+++++++|+++++|++++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  348 (351)
T 3ruf_A          299 KLSIKYREFRSGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRF  348 (351)
T ss_dssp             ----EEECCCTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             cccccccCCCCCccceeeeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence               111111 111 567899999998 99999999999999999999874

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=6.9e-37  Score=256.02  Aligned_cols=250  Identities=18%  Similarity=0.221  Sum_probs=197.0

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      .+++++.+|++| +.+.++++++|+|||+|+...  ....++. ..++.|+.++.++++++++.+ +++|||+||.+ +|
T Consensus        43 ~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~~~~~~~-~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~-vy  118 (313)
T 3ehe_A           43 EAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVRIGAENPD-EIYRNNVLATYRLLEAMRKAG-VSRIVFTSTST-VY  118 (313)
T ss_dssp             TTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC-CCCCHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGG-GG
T ss_pred             CCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChhhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchH-Hh
Confidence            478999999999 999999999999999999653  2334455 889999999999999999988 89999999987 55


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHH-
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAA-  171 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~-  171 (293)
                      +....   .+++|+.         +..|.+.|+.+|..+|.+++.++.+++++++++||+++||++...   ..+..++ 
T Consensus       119 g~~~~---~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~---~~~~~~~~  183 (313)
T 3ehe_A          119 GEAKV---IPTPEDY---------PTHPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH---GVIYDFIM  183 (313)
T ss_dssp             CSCSS---SSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC---SHHHHHHH
T ss_pred             CcCCC---CCCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc---ChHHHHHH
Confidence            54432   5788887         677889999999999999999999899999999999999998754   3343333 


Q ss_pred             HHHhCCc-ccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCC
Q 035985          172 TLITGND-FLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFG  249 (293)
Q Consensus       172 ~~~~~~~-~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~  249 (293)
                      ....+.. ..+.+.+     +..++|+|++|+|++++.+++....+++||+ +++++|++|+++.+++.+|.. .+..+.
T Consensus       184 ~~~~~~~~~~~~~~g-----~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~  257 (313)
T 3ehe_A          184 KLKRNPEELEILGNG-----EQNKSYIYISDCVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLS-PRFRFT  257 (313)
T ss_dssp             HHHHCTTEEEESTTS-----CCEECCEEHHHHHHHHHHHTTCCSSEEEEECCCSCCEEHHHHHHHHHHHTTCC-CEEEEC
T ss_pred             HHHcCCCceEEeCCC-----CeEEeEEEHHHHHHHHHHHhccCCCCceEEECCCCCeeHHHHHHHHHHHhCCC-CceEEC
Confidence            3344423 2233322     3468999999999999999996556678977 668999999999999999853 222211


Q ss_pred             C----CCcc-cccccchHHHHhcCCccccCHHHHHHHHHHHHHHc
Q 035985          250 D----FPSE-AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       250 ~----~~~~-~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      .    .... ....+|++|+++|||+|+++++++|+++++|++++
T Consensus       258 ~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~  302 (313)
T 3ehe_A          258 GGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRMAVRDLVED  302 (313)
T ss_dssp             ------------CCBCCHHHHHHTCCCSCCHHHHHHHHHHHHHHH
T ss_pred             CCccCCccccceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHhC
Confidence            1    1111 45679999998899999999999999999999875

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=2.6e-36  Score=252.37  Aligned_cols=250  Identities=20%  Similarity=0.218  Sum_probs=194.6

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      .+++++.+|++|++ +.+++++ |+|||+|+...  ....++. ..++.|+.++.+++++|++.+ +++|||+||.+ +|
T Consensus        43 ~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~-vy  117 (312)
T 3ko8_A           43 PSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRLSTTEPI-VHFNENVVATFNVLEWARQTG-VRTVVFASSST-VY  117 (312)
T ss_dssp             TTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSGGGSCHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGG-GG
T ss_pred             CCceEEECccccHH-HHhhcCC-CEEEECCCCCCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHH-Hh
Confidence            57899999999999 9988888 99999999653  2223444 788999999999999999988 89999999997 55


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHH-
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAA-  171 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~-  171 (293)
                      +....   .+++|+.         +..|.+.|+.+|..+|.+++.++.+++++++++||+++|||+...   ..+..++ 
T Consensus       118 g~~~~---~~~~e~~---------~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~---~~~~~~~~  182 (312)
T 3ko8_A          118 GDADV---IPTPEEE---------PYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH---GVIYDFIM  182 (312)
T ss_dssp             CSCSS---SSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS---SHHHHHHH
T ss_pred             CCCCC---CCCCCCC---------CCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC---ChHHHHHH
Confidence            54432   5788887         677889999999999999999998889999999999999998654   2333343 


Q ss_pred             HHHhCCcc-cccccccccccCCCCcceeHHhHHHHHHHhhcc----CCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCC
Q 035985          172 TLITGNDF-LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK----ESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVP  245 (293)
Q Consensus       172 ~~~~~~~~-~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~----~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~  245 (293)
                      ....+... .+.+.+     +..++|+|++|+|++++.++++    ...+++|++ +++.+|+.|+++.+.+.+|... +
T Consensus       183 ~~~~~~~~~~~~~~g-----~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~  256 (312)
T 3ko8_A          183 KLRRNPNVLEVLGDG-----TQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRP-E  256 (312)
T ss_dssp             HHHHCTTEEEEC---------CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCC-E
T ss_pred             HHHhCCCCeEEcCCC-----CeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCC-c
Confidence            33344232 232222     3368999999999999999987    334568877 5688999999999999987432 1


Q ss_pred             CCC-CC------CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcC
Q 035985          246 TDF-GD------FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       246 ~~~-~~------~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      ... +.      .+.. ....+|++|+++ |||+|+++++++|+++++|++++|
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~  310 (312)
T 3ko8_A          257 IRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKEL  310 (312)
T ss_dssp             EEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred             eeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence            111 11      1112 557899999976 999999999999999999999875

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.4e-36  Score=257.68  Aligned_cols=253  Identities=15%  Similarity=0.182  Sum_probs=200.8

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++.+|++|++.+.++++++|+|||+|+.......... .+++.|+.++.+++++|++.+ +++|||+||.+ +|+.
T Consensus        56 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~-vyg~  132 (347)
T 4id9_A           56 TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWAPADRD-RMFAVNVEGTRRLLDAASAAG-VRRFVFASSGE-VYPE  132 (347)
T ss_dssp             SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCSSGGGHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGG-GTTT
T ss_pred             CCccEEecCcCCHHHHHHHHhCCCEEEECCcccCcchhhHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHH-HhCC
Confidence            46889999999999999999999999999998764433334 889999999999999999988 99999999997 5554


Q ss_pred             c-cCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCcc-------------CCCCC
Q 035985           95 A-QNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMS-------------GPSLT  160 (293)
Q Consensus        95 ~-~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~-------------G~~~~  160 (293)
                      . ...  .+++|++         +..|.+.|+.+|..+|++++.++++++++++++||+++|             ||+..
T Consensus       133 ~~~~~--~~~~E~~---------~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~  201 (347)
T 4id9_A          133 NRPEF--LPVTEDH---------PLCPNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFF  201 (347)
T ss_dssp             TSCSS--SSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHB
T ss_pred             CCCCC--CCcCCCC---------CCCCCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcc
Confidence            2 222  5788887         777889999999999999999999889999999999999             76533


Q ss_pred             CC---------CCccHHHHHHHH-hCCcccccccccccccCCCCcc----eeHHhHHHHHHHhhccC-CCCCcEEE-ecc
Q 035985          161 PD---------IPSSVALAATLI-TGNDFLLNGLKGMQMLSGSISI----SHVEDVCRAHIFLAEKE-SASGRYIC-CAV  224 (293)
Q Consensus       161 ~~---------~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~----v~v~D~a~~~~~~~~~~-~~~~~y~~-~~~  224 (293)
                      ..         ....+..++... .+....+.+.+     +..++|    +|++|+|++++.+++++ ..+++|++ +++
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~  276 (347)
T 4id9_A          202 LRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARN-----ENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADE  276 (347)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEEC-----TTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSS
T ss_pred             cccccccccccchhHHHHHHHHHHcCCCeEEeCCC-----CcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCC
Confidence            21         113344444444 44443343322     346889    99999999999999987 45679977 678


Q ss_pred             CCCHHHHHHHHHHhCCCCCCCCC-CCCCCcccccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          225 NTSVPELAKFLNKRFPEYKVPTD-FGDFPSEAKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       225 ~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      .+|+.|+++.+++.+|.. .+.. .+..+  ....+|++|+++ |||+|+++++++|+++++|++++
T Consensus       277 ~~s~~e~~~~i~~~~g~~-~~~~~~p~~~--~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  340 (347)
T 4id9_A          277 PADFAALLPKIAALTGLP-IVTVDFPGDG--VYYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQR  340 (347)
T ss_dssp             CEEHHHHHHHHHHHHCCC-EEEEECSSCC--CBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHhCCC-CceeeCCCcc--cccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence            899999999999999852 2211 11111  367899999998 99999999999999999999875

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=3.6e-36  Score=256.56  Aligned_cols=248  Identities=17%  Similarity=0.120  Sum_probs=198.1

Q ss_pred             CCeEEEecCCCCCcchhhh-hcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcc
Q 035985           15 GELKIFRADLTDEASFDAP-ISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSI   93 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~-~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~   93 (293)
                      .+++++.+|++|++.+.++ ..++|+|||+|+.......++. ..++.|+.++.+++++|++.+ ++ |||+||.+ +|+
T Consensus        68 ~~~~~~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~-~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~-vyg  143 (362)
T 3sxp_A           68 FKGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQE-LVMKTNYQAFLNLLEIARSKK-AK-VIYASSAG-VYG  143 (362)
T ss_dssp             CCSEEEECCTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHH-HHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGG-GGC
T ss_pred             cCceEEECCCCCHHHHHHhhccCCCEEEECCccCCccccCHH-HHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHH-HhC
Confidence            4689999999999999998 7899999999997665445565 889999999999999999988 76 99999987 665


Q ss_pred             cccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC--ccHHHHH
Q 035985           94 NAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP--SSVALAA  171 (293)
Q Consensus        94 ~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~--~~~~~~~  171 (293)
                      ...    .+++|++         +..|.+.|+.+|..+|.+++.++.+  ++++++||+++|||+......  ..+..++
T Consensus       144 ~~~----~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~  208 (362)
T 3sxp_A          144 NTK----APNVVGK---------NESPENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLA  208 (362)
T ss_dssp             SCC----SSBCTTS---------CCCCSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHH
T ss_pred             CCC----CCCCCCC---------CCCCCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHH
Confidence            443    3688887         7788899999999999999988765  899999999999998764321  3344444


Q ss_pred             H-HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCC
Q 035985          172 T-LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFG  249 (293)
Q Consensus       172 ~-~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~  249 (293)
                      . ...+....+.+.+     +..++|+|++|+|++++.+++.+..+ +|++ +++.+|++|+++.+++.+|  +.+....
T Consensus       209 ~~~~~~~~~~~~~~g-----~~~~~~i~v~Dva~ai~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g--~~~~~~~  280 (362)
T 3sxp_A          209 LGAMAFKEVKLFEFG-----EQLRDFVYIEDVIQANVKAMKAQKSG-VYNVGYSQARSYNEIVSILKEHLG--DFKVTYI  280 (362)
T ss_dssp             HHHHTTSEEECSGGG-----CCEEECEEHHHHHHHHHHHTTCSSCE-EEEESCSCEEEHHHHHHHHHHHHC--CCEEECC
T ss_pred             HHHHhCCCeEEECCC-----CeEEccEEHHHHHHHHHHHHhcCCCC-EEEeCCCCCccHHHHHHHHHHHcC--CCceEEC
Confidence            4 3445554443332     34689999999999999999987654 9977 6788999999999999998  3332222


Q ss_pred             CCC--cc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          250 DFP--SE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       250 ~~~--~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +.+  .. ....+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       281 ~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  324 (362)
T 3sxp_A          281 KNPYAFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAI  324 (362)
T ss_dssp             C-------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC
T ss_pred             CCCCcCcccceecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            222  12 667899999976 99999999999999999999764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.4e-36  Score=254.53  Aligned_cols=257  Identities=16%  Similarity=0.119  Sum_probs=198.0

Q ss_pred             CeEEEecCCCCCcchhhhhcC--CCEEEEecccCC---CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           16 ELKIFRADLTDEASFDAPISR--SDIVFHVATPVN---FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      +++++++|++|++.+.+++++  +|+|||+|+...   ....++. .+++.|+.++.+++++|++.+ +++|||+||.+ 
T Consensus        39 ~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~-~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~-  115 (319)
T 4b8w_A           39 FVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNL-DFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTC-  115 (319)
T ss_dssp             ECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHH-HHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGG-
T ss_pred             ccCceecccCCHHHHHHHHhhcCCCEEEECceecccccccccCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchh-
Confidence            355568999999999999986  999999999854   2234455 789999999999999999998 99999999997 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCc-hhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC--CccH
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTW-GYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI--PSSV  167 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~-~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~--~~~~  167 (293)
                      +|+....   .+++|+++...     +..|.+ .|+.+|..+|++++.++++++++++++||+++|||+..+..  ...+
T Consensus       116 vyg~~~~---~~~~E~~~~~~-----~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~  187 (319)
T 4b8w_A          116 IFPDKTT---YPIDETMIHNG-----PPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVL  187 (319)
T ss_dssp             GSCSSCC---SSBCGGGGGBS-----CCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHH
T ss_pred             hcCCCCC---CCccccccccC-----CCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCcccccc
Confidence            5654432   57788753221     334555 69999999999999999888999999999999999876432  2234


Q ss_pred             HHHHH-----HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CCcEEE-eccCCCHHHHHHHHHHhC
Q 035985          168 ALAAT-----LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SGRYIC-CAVNTSVPELAKFLNKRF  239 (293)
Q Consensus       168 ~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~~y~~-~~~~~t~~e~~~~i~~~~  239 (293)
                      ..++.     ...+....+.+.+     +..++|+|++|+|++++.++.++..  +++|++ +++.+|+.|+++.+.+.+
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~  262 (319)
T 4b8w_A          188 PGLIHKVHLAKSSGSALTVWGTG-----NPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAM  262 (319)
T ss_dssp             HHHHHHHHHHHHHTCCEEEESCS-----CCEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhccCCceEEeCCC-----CeeEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHh
Confidence            43333     3455555444433     3468999999999999999987433  347866 678999999999999999


Q ss_pred             CCCCCCCCCCCCC-cc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          240 PEYKVPTDFGDFP-SE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       240 ~~~~~~~~~~~~~-~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      |. +.+..+.+.. .. ....+|++|+++ |||.|.++++++|+++++|++++
T Consensus       263 g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~  314 (319)
T 4b8w_A          263 DF-HGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDN  314 (319)
T ss_dssp             TC-CSCEEEETTSCCCCSCCCBCCHHHHHHCTTCCCCCHHHHHHHHHHHHHHS
T ss_pred             CC-CCcEEeCCCCCcCcccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence            84 2232222211 11 456799999998 99999999999999999999986

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=5.9e-36  Score=253.30  Aligned_cols=260  Identities=18%  Similarity=0.172  Sum_probs=200.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      .+++++.+|++|++++.++++  ++|+|||+|+....  ....+. +.++.|+.++.++++++++.+ +++||++||.+ 
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~-  131 (341)
T 3enk_A           55 KTPAFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPI-EYYRNNLDSLLSLLRVMRERA-VKRIVFSSSAT-  131 (341)
T ss_dssp             CCCEEECCCTTCHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGG-
T ss_pred             CCceEEEeecCCHHHHHHHHhccCCcEEEECccccccCccccChH-HHHHHHHHHHHHHHHHHHhCC-CCEEEEEecce-
Confidence            478999999999999999998  89999999997642  122344 778899999999999999998 89999999987 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCC-ceEEEEccCCccCCCCCC------C-
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENN-IDLITVIPSLMSGPSLTP------D-  162 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~-~~~~ilR~~~v~G~~~~~------~-  162 (293)
                      +|+....   .+++|+.         +..|.+.|+.+|..+|.+++.++.+++ ++++++||+++||++...      . 
T Consensus       132 ~~g~~~~---~~~~e~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~  199 (341)
T 3enk_A          132 VYGVPER---SPIDETF---------PLSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAG  199 (341)
T ss_dssp             GBCSCSS---SSBCTTS---------CCBCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSS
T ss_pred             EecCCCC---CCCCCCC---------CCCCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCccc
Confidence            5654432   5788887         667889999999999999999988875 999999999999996521      1 


Q ss_pred             -CCccHHHHHHHHhCCcccccccc-c--ccccCCCCcceeHHhHHHHHHHhhcc---CCCCCcEEE-eccCCCHHHHHHH
Q 035985          163 -IPSSVALAATLITGNDFLLNGLK-G--MQMLSGSISISHVEDVCRAHIFLAEK---ESASGRYIC-CAVNTSVPELAKF  234 (293)
Q Consensus       163 -~~~~~~~~~~~~~~~~~~~~~~~-g--~~~~~~~~~~v~v~D~a~~~~~~~~~---~~~~~~y~~-~~~~~t~~e~~~~  234 (293)
                       ...++..+.....+....+...+ +  ..+++..++|+|++|+|++++.+++.   ...+++||+ +++.+|++|+++.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~  279 (341)
T 3enk_A          200 IPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRA  279 (341)
T ss_dssp             SCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHH
T ss_pred             CccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHH
Confidence             12344555555555433332111 0  00113468999999999999999986   245678987 6789999999999


Q ss_pred             HHHhCCCCCCCCCCCC-CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcC
Q 035985          235 LNKRFPEYKVPTDFGD-FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       235 i~~~~~~~~~~~~~~~-~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      +++.+|. +.+....+ .+.. ....+|++|+++ |||+|+++++++|+++++|++++.
T Consensus       280 i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~  337 (341)
T 3enk_A          280 FEKASGR-AVPYELVARRPGDVAECYANPAAAAETIGWKAERDLERMCADHWRWQENNP  337 (341)
T ss_dssp             HHHHHCS-CCCEEEECCCTTCCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHST
T ss_pred             HHHHhCC-CcceeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcC
Confidence            9999885 33322221 2222 567899999997 999999999999999999999874

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=1.1e-35  Score=251.11  Aligned_cols=253  Identities=19%  Similarity=0.232  Sum_probs=197.7

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++.+|++|++.+.+++.++|+|||+|+.....  ..++. .+++.|+.++.+++++|++.+ +++|||+||.+ +|
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~-~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~-vy  131 (337)
T 1r6d_A           55 PRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGAS-VFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQ-VY  131 (337)
T ss_dssp             TTEEEEECCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGG-GG
T ss_pred             CCeEEEEcCCCCHHHHHHHhcCCCEEEECCCccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEecchH-Hh
Confidence            579999999999999999999999999999975421  12344 789999999999999999998 89999999997 55


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAAT  172 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~  172 (293)
                      +....   .+++|+.         +..|.+.|+.+|..+|.+++.++.+++++++++||+++||++..+.  ..+..++.
T Consensus       132 g~~~~---~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~--~~~~~~~~  197 (337)
T 1r6d_A          132 GSIDS---GSWTESS---------PLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE--KLIPLFVT  197 (337)
T ss_dssp             CCCSS---SCBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT--SHHHHHHH
T ss_pred             CCCCC---CCCCCCC---------CCCCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC--ChHHHHHH
Confidence            54322   4678887         6677889999999999999999888899999999999999986532  33444443


Q ss_pred             -HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCC-C
Q 035985          173 -LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDF-G  249 (293)
Q Consensus       173 -~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~-~  249 (293)
                       ...+....+...+     +..++|+|++|+|++++.+++.+..+++|++ +++.+|++|+++.+.+.+|.......+ .
T Consensus       198 ~~~~~~~~~~~~~~-----~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~  272 (337)
T 1r6d_A          198 NLLDGGTLPLYGDG-----ANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVA  272 (337)
T ss_dssp             HHHTTCCEEEETTS-----CCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEEC
T ss_pred             HHhcCCCcEEeCCC-----CeeEeeEeHHHHHHHHHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecC
Confidence             3445444433322     3358999999999999999987666678977 567899999999999998853111111 1


Q ss_pred             CCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          250 DFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       250 ~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      ..+.. ....+|++|+++ |||+|+++++++|+++++|++++
T Consensus       273 ~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  314 (337)
T 1r6d_A          273 DRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN  314 (337)
T ss_dssp             CCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             CCCCCcceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhc
Confidence            11111 345689999997 99999999999999999999875

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=2.7e-35  Score=248.72  Aligned_cols=254  Identities=17%  Similarity=0.193  Sum_probs=196.8

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++.+|++|++.+.+++.++|+|||+|+....  ...++. .+++.|+.++.+++++|.+.+..++|||+||.+ +|
T Consensus        54 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~-vy  131 (336)
T 2hun_A           54 PRYTFVKGDVADYELVKELVRKVDGVVHLAAESHVDRSISSPE-IFLHSNVIGTYTLLESIRRENPEVRFVHVSTDE-VY  131 (336)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHTCSEEEECCCCCCHHHHHHCTH-HHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGG-GG
T ss_pred             CceEEEEcCCCCHHHHHHHhhCCCEEEECCCCcChhhhhhCHH-HHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHH-HH
Confidence            57999999999999999999999999999997541  112344 789999999999999999886237999999997 55


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAAT  172 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~  172 (293)
                      +....   .+++|++         +..|.+.|+.+|..+|.+++.++.+++++++++||+++||++..+.  ..+..++.
T Consensus       132 g~~~~---~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~--~~~~~~~~  197 (336)
T 2hun_A          132 GDILK---GSFTEND---------RLMPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE--KLIPKTII  197 (336)
T ss_dssp             CCCSS---SCBCTTB---------CCCCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT--SHHHHHHH
T ss_pred             CCCCC---CCcCCCC---------CCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC--chHHHHHH
Confidence            54322   4678886         6677889999999999999999988899999999999999986432  33444443


Q ss_pred             -HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCC-C
Q 035985          173 -LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDF-G  249 (293)
Q Consensus       173 -~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~-~  249 (293)
                       ...+....+.+.+     +..++|+|++|+|++++.+++.+..+++|++ ++..+|++|+++.+++.+|.......+ .
T Consensus       198 ~~~~~~~~~~~~~~-----~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~  272 (336)
T 2hun_A          198 RASLGLKIPIYGTG-----KNVRDWLYVEDHVRAIELVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVE  272 (336)
T ss_dssp             HHHTTCCEEEETC--------CEEEEEHHHHHHHHHHHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEEC
T ss_pred             HHHcCCCceEeCCC-----CceeeeEEHHHHHHHHHHHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccC
Confidence             3445444443322     3368999999999999999987666678977 557899999999999999853211111 1


Q ss_pred             CCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          250 DFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       250 ~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      ..+.. ....+|++|+++ |||+|+++++++|+++++|++++
T Consensus       273 ~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  314 (336)
T 2hun_A          273 DRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKN  314 (336)
T ss_dssp             CCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHT
T ss_pred             CCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence            11111 346789999998 99999999999999999999875

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=4.9e-36  Score=250.60  Aligned_cols=255  Identities=22%  Similarity=0.253  Sum_probs=196.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      .+++++++|++|++++.++++  ++|+|||+|+....  ...++. ..++.|+.++.+++++|++.+ +++||++||.+.
T Consensus        43 ~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~-~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~  120 (311)
T 2p5y_A           43 KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPV-LDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGA  120 (311)
T ss_dssp             TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHH
T ss_pred             cCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChh
Confidence            367899999999999999998  89999999987541  112344 788999999999999999988 899999999833


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC-CccHHH
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI-PSSVAL  169 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~-~~~~~~  169 (293)
                      +|+.....  .+++|+.         +..|.+.|+.+|..+|.+++.++++++++++++||+++|||+..... ...+..
T Consensus       121 ~~g~~~~~--~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~  189 (311)
T 2p5y_A          121 IYGEVPEG--ERAEETW---------PPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAI  189 (311)
T ss_dssp             HHCCCCTT--CCBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHH
T ss_pred             hcCCCCCC--CCcCCCC---------CCCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHH
Confidence            66541111  4677876         56678899999999999999998878999999999999999875432 223444


Q ss_pred             HHHH-HhCCcccccc----cccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCC
Q 035985          170 AATL-ITGNDFLLNG----LKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYK  243 (293)
Q Consensus       170 ~~~~-~~~~~~~~~~----~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~  243 (293)
                      ++.. ..+.+..+..    .+|    +..++|+|++|+|++++.+++.+  +++|++ +++.+|++|+++.+++.+|.. 
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~g----~~~~~~i~v~Dva~a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-  262 (311)
T 2p5y_A          190 FAERVLKGLPVTLYARKTPGDE----GCVRDYVYVGDVAEAHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGKA-  262 (311)
T ss_dssp             HHHHHHHTCCEEEECSSSTTSC----CCEECEEEHHHHHHHHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTCC-
T ss_pred             HHHHHHcCCCcEEEecccCCCC----CeEEeeEEHHHHHHHHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCCC-
Confidence            4433 3454443330    121    23589999999999999999865  678977 678899999999999998742 


Q ss_pred             CCCC-CCCCCcc-cccccchHHHHhcCCccccCHHHHHHHHHHHHHHc
Q 035985          244 VPTD-FGDFPSE-AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       244 ~~~~-~~~~~~~-~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      .+.. .+..+.. ....+|++|+++|||+|+++++++++++++|++++
T Consensus       263 ~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~~  310 (311)
T 2p5y_A          263 PEVQPAPPRPGDLERSVLSPLKLMAHGWRPKVGFQEGIRLTVDHFRGA  310 (311)
T ss_dssp             CCEEEECCCTTCCSBCCBCCHHHHTTTCCCSSCHHHHHHHHHHHHHTC
T ss_pred             CCceeCCCCccchhhccCCHHHHHHCCCCCCCCHHHHHHHHHHHHHhh
Confidence            2221 1111112 56789999998899999999999999999999863

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=2e-36  Score=253.02  Aligned_cols=252  Identities=15%  Similarity=0.153  Sum_probs=196.1

Q ss_pred             CeEEEecCCCCCcchhhhhc--CCCEEEEecccCCCC-CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           16 ELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFS-SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      +++++.+|++|++++.++++  ++|+|||+|+..... ..++. ..++.|+.++.+++++|++.+ +++|||+||.+ +|
T Consensus        46 ~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~-~~  122 (312)
T 2yy7_A           46 SGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPA-FAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIA-VF  122 (312)
T ss_dssp             SSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGG-GC
T ss_pred             CCceEEecCCCHHHHHHHHhhcCCCEEEECCccCCCchhhChH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHH-Hh
Confidence            57899999999999999998  899999999975321 12344 789999999999999999988 89999999997 55


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC---ccHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP---SSVAL  169 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~---~~~~~  169 (293)
                      +.....  .+++|+.         +..|.+.|+.+|..+|.+++.++++++++++++||+++||+...+...   .....
T Consensus       123 ~~~~~~--~~~~e~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~  191 (312)
T 2yy7_A          123 GPTTPK--ENTPQYT---------IMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDI  191 (312)
T ss_dssp             CTTSCS--SSBCSSC---------BCCCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHH
T ss_pred             CCCCCC--CCccccC---------cCCCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHH
Confidence            443222  4567776         667888999999999999999988779999999999999987544321   23444


Q ss_pred             HHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC----CCcEEEeccCCCHHHHHHHHHHhCCCCCCC
Q 035985          170 AATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA----SGRYICCAVNTSVPELAKFLNKRFPEYKVP  245 (293)
Q Consensus       170 ~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~----~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~  245 (293)
                      +...+.++...+...+     +..++|+|++|+|++++.+++++..    +++||++++.+|++|+++.+.+.+|...++
T Consensus       192 ~~~~~~~~~~~~~~~~-----~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~~~i~  266 (312)
T 2yy7_A          192 FYKAIADKKYECFLSS-----ETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTIT  266 (312)
T ss_dssp             HHHHHHTSEEEESSCT-----TCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCTTCEEE
T ss_pred             HHHHHcCCCeEEecCC-----CceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCCCCceE
Confidence            5555556554443322     4479999999999999999987643    368988778899999999999999843332


Q ss_pred             CCCCCCCcc----cccccchHHHHh-cCCccccCHHHHHHHHHHHHH
Q 035985          246 TDFGDFPSE----AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLK  287 (293)
Q Consensus       246 ~~~~~~~~~----~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~  287 (293)
                      .. +.....    ....+|++|+++ |||+|+++++++|+++++|++
T Consensus       267 ~~-~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~k  312 (312)
T 2yy7_A          267 YE-PDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHLS  312 (312)
T ss_dssp             EC-CCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred             ec-cCccccccccccccCCHHHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence            11 111111    235689999998 999999999999999999984

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=1.9e-35  Score=251.22  Aligned_cols=254  Identities=19%  Similarity=0.219  Sum_probs=197.7

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++.+|++|++++.++++++|+|||+|+....  ...++. ..++.|+.++.+++++|++.+ +++|||+||.+ +|
T Consensus        81 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~-~~  157 (352)
T 1sb8_A           81 SNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPI-TSNATNIDGFLNMLIAARDAK-VQSFTYAASSS-TY  157 (352)
T ss_dssp             TTEEEEECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGG-GG
T ss_pred             CceEEEECCCCCHHHHHHHhcCCCEEEECCcccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHH-hc
Confidence            47899999999999999999999999999997541  112344 788999999999999999988 89999999998 45


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC--CccHHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI--PSSVALA  170 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~--~~~~~~~  170 (293)
                      +....   .+++|++         +..|.+.|+.+|..+|.+++.++.+.+++++++||+++||++.....  ...+..+
T Consensus       158 ~~~~~---~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~  225 (352)
T 1sb8_A          158 GDHPG---LPKVEDT---------IGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKW  225 (352)
T ss_dssp             TTCCC---SSBCTTC---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHH
T ss_pred             CCCCC---CCCCCCC---------CCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHH
Confidence            43322   4678887         66788899999999999999998877999999999999999875431  1334444


Q ss_pred             H-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc--CCCCCcEEE-eccCCCHHHHHHHHHHhC---CCCC
Q 035985          171 A-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK--ESASGRYIC-CAVNTSVPELAKFLNKRF---PEYK  243 (293)
Q Consensus       171 ~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~--~~~~~~y~~-~~~~~t~~e~~~~i~~~~---~~~~  243 (293)
                      + ....+.+..+.+.+     +..++|+|++|+|++++.++..  ...+++|++ +++.+|++|+++.+++.+   |.. 
T Consensus       226 ~~~~~~~~~~~~~g~g-----~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~-  299 (352)
T 1sb8_A          226 TSSMIQGDDVYINGDG-----ETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVS-  299 (352)
T ss_dssp             HHHHHHTCCCEEESSS-----CCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCC-
T ss_pred             HHHHHCCCCcEEeCCC-----CceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCC-
Confidence            3 33455554443322     3468999999999999998876  234668977 578999999999999998   642 


Q ss_pred             CC--CCCCCC-Ccc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          244 VP--TDFGDF-PSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       244 ~~--~~~~~~-~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      .+  ..+... +.. ....+|++|+++ |||+|+++++++|+++++|++++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  350 (352)
T 1sb8_A          300 YHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF  350 (352)
T ss_dssp             CCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCceecCCCccchhhccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            22  111111 111 456789999997 99999999999999999999864

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=3.8e-35  Score=247.18  Aligned_cols=258  Identities=19%  Similarity=0.242  Sum_probs=197.6

Q ss_pred             CeEEEecCCCCCcchhhhhc--CCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           16 ELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      +++++.+|++|++.+.++++  ++|+|||+|+.....  ..++. .+++.|+.++.+++++|++.+ +++|||+||.+ +
T Consensus        45 ~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~-~  121 (330)
T 2c20_A           45 GAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPL-QYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAA-T  121 (330)
T ss_dssp             TSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCHHHHHHSHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGG-G
T ss_pred             CcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCccccccCHH-HHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCce-e
Confidence            68999999999999999998  899999999975421  12344 788999999999999999988 89999999987 5


Q ss_pred             cccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC-------CC
Q 035985           92 SINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD-------IP  164 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-------~~  164 (293)
                      |+....   .+++|++         +..|.+.|+.+|..+|.+++.++++++++++++||+++||++....       ..
T Consensus       122 ~~~~~~---~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~  189 (330)
T 2c20_A          122 YGEVDV---DLITEET---------MTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPET  189 (330)
T ss_dssp             GCSCSS---SSBCTTS---------CCCCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCC
T ss_pred             eCCCCC---CCCCcCC---------CCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCcccccccccc
Confidence            554322   5788887         6677889999999999999999988899999999999999974321       12


Q ss_pred             ccHHHHHHHHhCCc--ccccccc-cccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEE-eccCCCHHHHHHHHHH
Q 035985          165 SSVALAATLITGND--FLLNGLK-GMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYIC-CAVNTSVPELAKFLNK  237 (293)
Q Consensus       165 ~~~~~~~~~~~~~~--~~~~~~~-g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~-~~~~~t~~e~~~~i~~  237 (293)
                      .++..+.....+..  ..+.+.. ...+.+..++|+|++|+|++++.+++++.   .+++||+ +++.+|++|+++.+++
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~  269 (330)
T 2c20_A          190 HLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVRE  269 (330)
T ss_dssp             SHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHH
T ss_pred             chHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHH
Confidence            34455555444432  2222210 00011346899999999999999997643   2468977 5688999999999999


Q ss_pred             hCCCCCCCCCCCC-CCcc-cccccchHHHHh-cCCcccc-CHHHHHHHHHHHHHHc
Q 035985          238 RFPEYKVPTDFGD-FPSE-AKLILSSEKLIS-EGFCFKY-GIEDIYDQTVEYLKTK  289 (293)
Q Consensus       238 ~~~~~~~~~~~~~-~~~~-~~~~~d~~k~~~-lG~~~~~-~~~~~i~~~i~~~~~~  289 (293)
                      .+|. +++....+ .+.. ....+|++|+++ |||+|++ +++++++++++|++++
T Consensus       270 ~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~  324 (330)
T 2c20_A          270 VTNH-EIPAEVAPRRAGDPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQ  324 (330)
T ss_dssp             HTTS-CCCEEEECCCSSCCSEECBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHC
T ss_pred             HhCC-CCceeeCCCCCCcccccccCHHHHHHHhCCCCccCCHHHHHHHHHHHHHHh
Confidence            9984 33322111 1111 467899999987 9999999 9999999999999886

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=4.5e-35  Score=245.80  Aligned_cols=252  Identities=18%  Similarity=0.206  Sum_probs=194.6

Q ss_pred             CeEEEecCCCCCcchhhhhcC--CCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           16 ELKIFRADLTDEASFDAPISR--SDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      +++++.+|++|++.+.+++++  +|+|||+|+....  ...++. ..++.|+.++.+++++|++.+++++|||+||.+ +
T Consensus        52 ~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~-v  129 (321)
T 2pk3_A           52 NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKK-GTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSE-E  129 (321)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTCHH-HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGG-G
T ss_pred             eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccchhhhhhcHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHH-h
Confidence            578999999999999999985  9999999997642  123444 789999999999999998762389999999997 4


Q ss_pred             ccccc-CCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHH
Q 035985           92 SINAQ-NVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALA  170 (293)
Q Consensus        92 ~~~~~-~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~  170 (293)
                      |+... ..  .+++|++         +..|.+.|+.+|..+|.+++.++.+++++++++||+++|||+....  ..+..+
T Consensus       130 ~g~~~~~~--~~~~E~~---------~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~--~~~~~~  196 (321)
T 2pk3_A          130 YGMILPEE--SPVSEEN---------QLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG--FVTQDF  196 (321)
T ss_dssp             TBSCCGGG--CSBCTTS---------CCBCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT--SHHHHH
T ss_pred             cCCCCCCC--CCCCCCC---------CCCCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC--chHHHH
Confidence            54321 11  5788887         6667889999999999999999887899999999999999987542  233333


Q ss_pred             HHHH-h---C--CcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCC
Q 035985          171 ATLI-T---G--NDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYK  243 (293)
Q Consensus       171 ~~~~-~---~--~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~  243 (293)
                      ...+ .   +  ....+...+     +..++|+|++|+|++++.+++.+..+++|++ +++.+|++|+++.+.+.+|.. 
T Consensus       197 ~~~~~~~~~g~~~~~~~~~~~-----~~~~~~v~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~-  270 (321)
T 2pk3_A          197 AKQIVDIEMEKQEPIIKVGNL-----EAVRDFTDVRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVK-  270 (321)
T ss_dssp             HHHHHHHHTTSSCSEEEESCS-----SCEEEEEEHHHHHHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSC-
T ss_pred             HHHHHHHhcCCCCCeEEeCCC-----CcEEeeEEHHHHHHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCC-
Confidence            3332 2   4  233332222     3368999999999999999987756678977 567899999999999999852 


Q ss_pred             CCCC-CC--CCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHH
Q 035985          244 VPTD-FG--DFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKT  288 (293)
Q Consensus       244 ~~~~-~~--~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~  288 (293)
                      .+.. .+  ..+.. ....+|++|+++ |||+|+++++++|+++++|+++
T Consensus       271 ~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~  320 (321)
T 2pk3_A          271 IDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYRQ  320 (321)
T ss_dssp             CEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHT
T ss_pred             CceeeccccCCCcccchhccCHHHHHHHcCCCcCCCHHHHHHHHHHHHhc
Confidence            2211 11  01111 567899999998 8999999999999999999985

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=3.7e-35  Score=245.89  Aligned_cols=255  Identities=18%  Similarity=0.247  Sum_probs=195.8

Q ss_pred             CeEEEecCCCCCcchhhhhc--CCCEEEEecccCCCC-CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           16 ELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFS-SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      +++++.+|++|++++.++++  ++|+|||+|+..... ..++. ..++.|+.++.+++++|++.+ +++||++||.+ +|
T Consensus        40 ~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~-~~  116 (317)
T 3ajr_A           40 GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPA-LAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIG-VF  116 (317)
T ss_dssp             TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGG-GC
T ss_pred             CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCCccccChH-HHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHH-Hh
Confidence            57889999999999999998  899999999875321 12344 788999999999999999988 89999999997 55


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC---CccHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI---PSSVAL  169 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~---~~~~~~  169 (293)
                      +.....  .+.+|+.         +..|.+.|+.+|..+|.+++.++++++++++++||+++||+...+..   ......
T Consensus       117 ~~~~~~--~~~~e~~---------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~  185 (317)
T 3ajr_A          117 GPETPK--NKVPSIT---------ITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEI  185 (317)
T ss_dssp             CTTSCS--SSBCSSS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHH
T ss_pred             CCCCCC--CCccccc---------cCCCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHH
Confidence            433221  3566766         66788999999999999999988878999999999999998654322   123344


Q ss_pred             HHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC----CCcEEEeccCCCHHHHHHHHHHhCCCCCCC
Q 035985          170 AATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA----SGRYICCAVNTSVPELAKFLNKRFPEYKVP  245 (293)
Q Consensus       170 ~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~----~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~  245 (293)
                      +...+.++...+...+     +..++|+|++|+|++++.+++++..    +++|++++..+|++|+++.+.+.+|...++
T Consensus       186 ~~~~~~~~~~~~~~~~-----~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~~~~i~  260 (317)
T 3ajr_A          186 FYYAVKREKYKCYLAP-----NRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIE  260 (317)
T ss_dssp             HHHHHTTCCEEECSCT-----TCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCCSCCEE
T ss_pred             HHHHHhCCCceeecCc-----cceeeeeEHHHHHHHHHHHHhCCccccccCceEecCCccccHHHHHHHHHHHCCccccc
Confidence            4555555554433322     4479999999999999999986542    368988777899999999999998843332


Q ss_pred             CCCCCCCcc----cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcC
Q 035985          246 TDFGDFPSE----AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       246 ~~~~~~~~~----~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      .. +.....    ....+|++|+++ |||+|+++++++++++++|++++-
T Consensus       261 ~~-~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~  309 (317)
T 3ajr_A          261 YK-EDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEKL  309 (317)
T ss_dssp             EC-CCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHT
T ss_pred             cc-cccchhhccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhh
Confidence            21 110111    234689999997 999999999999999999998763

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.1e-35  Score=254.56  Aligned_cols=260  Identities=17%  Similarity=0.221  Sum_probs=197.3

Q ss_pred             CCeEEEecCCC-CCcchhhhhcCCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           15 GELKIFRADLT-DEASFDAPISRSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        15 ~~v~~v~~Dl~-d~~~~~~~~~~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      ++++++.+|++ |.+.+.++++++|+|||+|+.....  ..++. ..++.|+.++.+++++|++.+  ++|||+||.+ +
T Consensus        69 ~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~-v  144 (372)
T 3slg_A           69 ERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPL-RVFELDFEANLPIVRSAVKYG--KHLVFPSTSE-V  144 (372)
T ss_dssp             TTEEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCHH-HHHHHHTTTTHHHHHHHHHHT--CEEEEECCGG-G
T ss_pred             CCeEEEeCccCCCHHHHHHHhccCCEEEEcCccccHHHHhhCHH-HHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHH-H
Confidence            58999999999 9999999999999999999976521  12455 788999999999999999987  7999999987 6


Q ss_pred             cccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC------Cc
Q 035985           92 SINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI------PS  165 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~------~~  165 (293)
                      |+....   .+++|+++.....  ....|.+.|+.+|..+|++++.++++ +++++++||+++||++..+..      ..
T Consensus       145 yg~~~~---~~~~e~~~~~~~~--p~~~p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~  218 (372)
T 3slg_A          145 YGMCAD---EQFDPDASALTYG--PINKPRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSR  218 (372)
T ss_dssp             GBSCCC---SSBCTTTCCEEEC--CTTCTTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCH
T ss_pred             hCCCCC---CCCCccccccccC--CCCCCCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccch
Confidence            655432   4677776321110  01257779999999999999999988 999999999999999876421      22


Q ss_pred             cHHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEec--cCCCHHHHHHHHHHhC
Q 035985          166 SVALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICCA--VNTSVPELAKFLNKRF  239 (293)
Q Consensus       166 ~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~~--~~~t~~e~~~~i~~~~  239 (293)
                      .+..++ ....+....+.+.+     +..++|+|++|+|++++.+++++.   .+++|++++  +.+|++|+++.+++.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~g-----~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~  293 (372)
T 3slg_A          219 VVTQFLGHIVRGENISLVDGG-----SQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELA  293 (372)
T ss_dssp             HHHHHHHHHHHTCCEEEGGGG-----CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcEEeCCC-----ceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHh
Confidence            444444 44456555554433     446899999999999999998864   566898754  6999999999999998


Q ss_pred             CCCCCC------CCC--------CCC--CcccccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          240 PEYKVP------TDF--------GDF--PSEAKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       240 ~~~~~~------~~~--------~~~--~~~~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      |.....      ..+        ...  .......+|++|+++ |||+|+++++++|+++++|++++
T Consensus       294 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  360 (372)
T 3slg_A          294 AEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGH  360 (372)
T ss_dssp             HHCTTTHHHHHTCCEEEC-------------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred             CCCcccccccccceeeeccccccccCCccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence            742110      000        000  011456789999998 99999999999999999999864

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.4e-34  Score=243.48  Aligned_cols=250  Identities=15%  Similarity=0.186  Sum_probs=187.2

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccc
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINA   95 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~   95 (293)
                      +++++.+|++|++++.++++++|+|||+|+.......++. .+++.|+.++.+++++|++.+ +++|||+||.+ +|+..
T Consensus        57 ~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~-~~~~~  133 (342)
T 2x4g_A           57 EPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQ-EEVASALGQTNPFYAACLQAR-VPRILYVGSAY-AMPRH  133 (342)
T ss_dssp             CCEEEECCTTCHHHHHHHTTTCSEEEEC-------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGG-GSCCC
T ss_pred             CeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCCCCCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHH-hhCcC
Confidence            7899999999999999999999999999997653334455 889999999999999999988 89999999997 44433


Q ss_pred             cCCCCccccCCCCCchhhhccCCCC----CchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCC-CCCCCccHHHH
Q 035985           96 QNVTGLVMDEKNWTDVEFLSSEKPP----TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSL-TPDIPSSVALA  170 (293)
Q Consensus        96 ~~~~~~~~~E~~~~~~~~~~~~~~p----~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~-~~~~~~~~~~~  170 (293)
                      ...  ...+|++         +..|    .+.|+.+|..+|.+++.+++. +++++++||+++||++. .+.   ....+
T Consensus       134 ~~~--~~~~E~~---------~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~---~~~~~  198 (342)
T 2x4g_A          134 PQG--LPGHEGL---------FYDSLPSGKSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPT---TGRVI  198 (342)
T ss_dssp             TTS--SCBCTTC---------CCSSCCTTSCHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCS---TTHHH
T ss_pred             CCC--CCCCCCC---------CCCccccccChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCcccc---HHHHH
Confidence            221  1237776         5566    789999999999999999877 99999999999999986 321   11222


Q ss_pred             HHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCC---CCC
Q 035985          171 ATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYK---VPT  246 (293)
Q Consensus       171 ~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~---~~~  246 (293)
                      .....+....+   +     +..++|+|++|+|++++.+++++..+++|++ ++. +|++|+++.+.+.+|...   +|.
T Consensus       199 ~~~~~~~~~~~---~-----~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~~~p~  269 (342)
T 2x4g_A          199 TAIGNGEMTHY---V-----AGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHN-LEMADLTRRIAELLGQPAPQPMSM  269 (342)
T ss_dssp             HHHHTTCCCEE---E-----CCEEEEEEHHHHHHHHHHHHHHSCTTCEEEECCEE-EEHHHHHHHHHHHHTCCCCEEECH
T ss_pred             HHHHcCCCccc---c-----CCCcceeeHHHHHHHHHHHHhCCCCCceEEEcCCc-ccHHHHHHHHHHHhCCCCCCcCCH
Confidence            23334444333   2     3468999999999999999987766678977 556 999999999999987421   111


Q ss_pred             C--------------CCCC-----Cc-----ccccccchHHHHh-cCC-ccccCHHHHHHHHHHHHHHcCCCC
Q 035985          247 D--------------FGDF-----PS-----EAKLILSSEKLIS-EGF-CFKYGIEDIYDQTVEYLKTKGMLK  293 (293)
Q Consensus       247 ~--------------~~~~-----~~-----~~~~~~d~~k~~~-lG~-~~~~~~~~~i~~~i~~~~~~~~~~  293 (293)
                      .              ..+.     +.     .....+|++|+++ ||| +| ++++++++++++|++++|+++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g~~~  341 (342)
T 2x4g_A          270 AMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDNGYFN  341 (342)
T ss_dssp             HHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcCCCC
Confidence            0              0000     00     1356789999998 999 99 799999999999999999875

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.6e-34  Score=245.07  Aligned_cols=255  Identities=15%  Similarity=0.204  Sum_probs=196.6

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++.+|++|++.+.++++++|+|||+|+....  ...++. ..++.|+.++.+++++|++.+ + +|||+||.+ +|
T Consensus        54 ~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~-vy  129 (348)
T 1oc2_A           54 DRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPS-PFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDE-VY  129 (348)
T ss_dssp             SSEEEEECCTTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCH-HHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGG-GG
T ss_pred             CCeEEEECCCCCHHHHHHHhhcCCEEEECCcccCccchhhCHH-HHHHHHHHHHHHHHHHHHHhC-C-eEEEecccc-ee
Confidence            57999999999999999999999999999997641  112344 789999999999999999988 7 999999987 45


Q ss_pred             ccccC---------CCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC
Q 035985           93 INAQN---------VTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI  163 (293)
Q Consensus        93 ~~~~~---------~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~  163 (293)
                      +....         ....+++|++         +..|.+.|+.+|..+|.+++.++.+++++++++||+++||++.... 
T Consensus       130 g~~~~~~~~~~~~~~~~~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-  199 (348)
T 1oc2_A          130 GDLPLREDLPGHGEGPGEKFTAET---------NYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-  199 (348)
T ss_dssp             CCBCCGGGSTTTTCSTTSSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-
T ss_pred             CCCcccccccccccccCCCcCCCC---------CCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-
Confidence            43211         0013577776         5667889999999999999999888899999999999999986532 


Q ss_pred             CccHHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCC
Q 035985          164 PSSVALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       164 ~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~  241 (293)
                       ..+..++ ....+....+...+     +..++|+|++|+|++++.+++.+..+++|++ ++..+|++|+++.+.+.+|.
T Consensus       200 -~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  273 (348)
T 1oc2_A          200 -KFIPRQITNILAGIKPKLYGEG-----KNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQ  273 (348)
T ss_dssp             -SHHHHHHHHHHHTCCCEEETTS-----CCEEECEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTC
T ss_pred             -chHHHHHHHHHcCCCceEecCC-----CceEeeEEHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCC
Confidence             3344333 33455544443322     3358999999999999999987656668977 56789999999999999985


Q ss_pred             CCCCCCC-CCCCcc-cccccchHHHHh-cCCccccC-HHHHHHHHHHHHHHc
Q 035985          242 YKVPTDF-GDFPSE-AKLILSSEKLIS-EGFCFKYG-IEDIYDQTVEYLKTK  289 (293)
Q Consensus       242 ~~~~~~~-~~~~~~-~~~~~d~~k~~~-lG~~~~~~-~~~~i~~~i~~~~~~  289 (293)
                      ......+ ...+.. ....+|++|+++ |||+|+++ ++++++++++|++++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~  325 (348)
T 1oc2_A          274 PKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN  325 (348)
T ss_dssp             CTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             CccccccCCCCCCcccccccCHHHHHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence            3211111 111211 445789999997 99999997 999999999999875

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=1.3e-34  Score=248.26  Aligned_cols=256  Identities=19%  Similarity=0.174  Sum_probs=191.1

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcC-CCccEEEEecccchh
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKT-KTVKRVILTSSAAAV   91 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~   91 (293)
                      ++++++.+|++|++.+.++++++|+|||+|+.....  ..++. ..++.|+.++.+++++|++. + +++|||+||.+ +
T Consensus        78 ~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~-v  154 (377)
T 2q1s_A           78 PAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPL-ADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGC-S  154 (377)
T ss_dssp             TTEEEECSCTTCHHHHHHCCSCCSEEEECCCCSCHHHHHHCHH-HHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC---
T ss_pred             CceEEEECCCCCHHHHHHHhhCCCEEEECCCccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHH-H
Confidence            579999999999999999999999999999975421  12344 78899999999999999998 7 89999999987 5


Q ss_pred             cccccCCCCcccc--CCCCCchhhhccCC-CCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCC---------
Q 035985           92 SINAQNVTGLVMD--EKNWTDVEFLSSEK-PPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSL---------  159 (293)
Q Consensus        92 ~~~~~~~~~~~~~--E~~~~~~~~~~~~~-~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~---------  159 (293)
                      |+....   .+++  |+.|..      +. .|.+.|+.+|..+|.+++.++.+++++++++||+++||++.         
T Consensus       155 yg~~~~---~~~~~~E~~~~~------~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~  225 (377)
T 2q1s_A          155 IAEKTF---DDAKATEETDIV------SLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRG  225 (377)
T ss_dssp             ---------------CCCCCC------CSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCS
T ss_pred             cCCCCC---CCcCcccccccc------cccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCccccccccc
Confidence            554322   3566  765310      22 56789999999999999999887799999999999999986         


Q ss_pred             CCCC--CccHHHHHHH-HhCCcccccccccccccCCCCcceeHHhHHHH-HHHhhccCCCCCcEEE-eccCCCHHHHHHH
Q 035985          160 TPDI--PSSVALAATL-ITGNDFLLNGLKGMQMLSGSISISHVEDVCRA-HIFLAEKESASGRYIC-CAVNTSVPELAKF  234 (293)
Q Consensus       160 ~~~~--~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~-~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~  234 (293)
                      .+..  ...+..++.. ..+....+.+.+     +..++|+|++|+|++ ++.+++.+..+ +|++ +++.+|++|+++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~g-----~~~~~~i~v~Dva~a~i~~~~~~~~~g-~~~i~~~~~~s~~e~~~~  299 (377)
T 2q1s_A          226 TPATVWRNVTPTFIYKALKGMPLPLENGG-----VATRDFIFVEDVANGLIACAADGTPGG-VYNIASGKETSIADLATK  299 (377)
T ss_dssp             SGGGTSCSHHHHHHHHHHTTCCCCCSGGG-----CCEECCEEHHHHHHHHHHHHHHCCTTE-EEECCCCCCEEHHHHHHH
T ss_pred             CcccccccHHHHHHHHHHcCCCeEEeCCC-----CeEEeeEEHHHHHHHHHHHHHhcCCCC-eEEecCCCceeHHHHHHH
Confidence            2210  2334444443 345444443322     346999999999999 99999876544 8877 5679999999999


Q ss_pred             HHHhCCCCCCCCCCCC-CCcc-c-ccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          235 LNKRFPEYKVPTDFGD-FPSE-A-KLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       235 i~~~~~~~~~~~~~~~-~~~~-~-~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +.+.+|.. .+....+ .+.. . ...+|++|+++ |||+|+++++++|+++++|++++
T Consensus       300 i~~~~g~~-~~~~~~p~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  357 (377)
T 2q1s_A          300 INEITGNN-TELDRLPKRPWDNSGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKAN  357 (377)
T ss_dssp             HHHHHTCC-SCCCCCCCCGGGCC-CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHhCCC-CCceeCCCCccccccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence            99998842 2222222 2222 4 67899999987 99999999999999999999874

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=9.2e-35  Score=245.36  Aligned_cols=255  Identities=15%  Similarity=0.130  Sum_probs=195.8

Q ss_pred             CCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCc-cEEEEecccc
Q 035985           15 GELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTV-KRVILTSSAA   89 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~SS~~   89 (293)
                      ++++++.+|++|++++.+++++  +|+|||+|+.....  ..++. ..++.|+.++.+++++|++.+ + ++|||+||.+
T Consensus        63 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~  140 (335)
T 1rpn_A           63 GDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPV-TTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSE  140 (335)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHH-HHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGG
T ss_pred             CceEEEECCCCCHHHHHHHHHHcCCCEEEECccccchhhhhhChH-HHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHH
Confidence            4789999999999999999885  79999999975421  23455 789999999999999999987 6 8999999987


Q ss_pred             hhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC-ccHH
Q 035985           90 AVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP-SSVA  168 (293)
Q Consensus        90 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~-~~~~  168 (293)
                       +|+....   .+++|++         +..|.+.|+.+|..+|.+++.++++++++++++||+++|||+...... ..+.
T Consensus       141 -v~g~~~~---~~~~E~~---------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~  207 (335)
T 1rpn_A          141 -MFGLIQA---ERQDENT---------PFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVT  207 (335)
T ss_dssp             -GGCSCSS---SSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHH
T ss_pred             -HhCCCCC---CCCCccc---------CCCCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHH
Confidence             5554322   4688887         667888999999999999999988889999999999999998654321 1122


Q ss_pred             HHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCC-CC
Q 035985          169 LAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYK-VP  245 (293)
Q Consensus       169 ~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~-~~  245 (293)
                      .++ ....+....+...+|    +..++|+|++|+|++++.+++++. +++|++ +++.+|++|+++.+.+.+|... ..
T Consensus       208 ~~~~~~~~g~~~~~~~g~g----~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~  282 (335)
T 1rpn_A          208 DAVARIKLGKQQELRLGNV----DAKRDWGFAGDYVEAMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDF  282 (335)
T ss_dssp             HHHHHHHTTSCSCEEESCT----TCEEECEEHHHHHHHHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGT
T ss_pred             HHHHHHHcCCCceEEeCCC----cceeceEEHHHHHHHHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCcccc
Confidence            233 333454333322221    346899999999999999998765 478977 6678999999999999998521 01


Q ss_pred             CCCCC---CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          246 TDFGD---FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       246 ~~~~~---~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      ..+..   .+.. ....+|++|+++ |||+|+++++++|+++++|++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  331 (335)
T 1rpn_A          283 LKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRR  331 (335)
T ss_dssp             EEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             ccccccccCCCcchhhcCCHHHHHHhcCCCcCCCHHHHHHHHHHHHHHh
Confidence            11111   1111 456789999997 99999999999999999999874

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=1.3e-34  Score=246.51  Aligned_cols=254  Identities=19%  Similarity=0.168  Sum_probs=193.4

Q ss_pred             CCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPISR--SDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      ++++++++|++|++.+.+++++  +|+|||+|+....  ...++. ..++.|+.++.+++++|++.+.+++|||+||.+ 
T Consensus        57 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~-  134 (357)
T 1rkx_A           57 DGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPV-ETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDK-  134 (357)
T ss_dssp             TTSEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGG-
T ss_pred             CceEEEEccccCHHHHHHHHHhcCCCEEEECCCCcccccchhCHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHH-
Confidence            4789999999999999999885  8999999996421  122344 788999999999999999875478999999997 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---------CceEEEEccCCccCCCCCC
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---------NIDLITVIPSLMSGPSLTP  161 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---------~~~~~ilR~~~v~G~~~~~  161 (293)
                      +|+.....  .+++|++         +..|.+.|+.+|..+|++++.++.++         +++++++||+++|||+...
T Consensus       135 vyg~~~~~--~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~  203 (357)
T 1rkx_A          135 CYDNKEWI--WGYRENE---------AMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA  203 (357)
T ss_dssp             GBCCCCSS--SCBCTTS---------CBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC
T ss_pred             HhCCCCcC--CCCCCCC---------CCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCc
Confidence            56544321  3577776         55678899999999999999987654         8999999999999998643


Q ss_pred             CCCccHHHHHHHH-hCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc-----CCCCCcEEEe---ccCCCHHHHH
Q 035985          162 DIPSSVALAATLI-TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK-----ESASGRYICC---AVNTSVPELA  232 (293)
Q Consensus       162 ~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~-----~~~~~~y~~~---~~~~t~~e~~  232 (293)
                      . ...+..++..+ .+....+.. +     +..++|+|++|+|++++.++..     ...+++|+++   ++.+|++|++
T Consensus       204 ~-~~~~~~~~~~~~~g~~~~~~~-~-----~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~  276 (357)
T 1rkx_A          204 L-DRIVPDILRAFEQSQPVIIRN-P-----HAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIV  276 (357)
T ss_dssp             S-SCHHHHHHHHHHTTCCEECSC-T-----TCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHH
T ss_pred             c-ccHHHHHHHHHhcCCCEEECC-C-----CCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHH
Confidence            2 23445554444 454443321 2     3468999999999999998874     2346789875   3689999999


Q ss_pred             HHHHHhCCCCCCCCCCCCC--Ccc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          233 KFLNKRFPEYKVPTDFGDF--PSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       233 ~~i~~~~~~~~~~~~~~~~--~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +.+.+.+|.. .+..+.+.  +.. ....+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       277 ~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  336 (357)
T 1rkx_A          277 EQMVKYWGEG-ASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNW  336 (357)
T ss_dssp             HHHHHHHCTT-CCEEC-------CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCC-CccccCCCCCCcCcccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHH
Confidence            9999998742 22222211  111 567899999997 99999999999999999999864

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=4.6e-34  Score=244.94  Aligned_cols=258  Identities=14%  Similarity=0.073  Sum_probs=195.7

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCC---CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFS---SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      .+++++.+|++|++++.++++++|+|||+|+.....   ..++. .+++.|+.++.+++++|++.+ +++|||+||.+ +
T Consensus        72 ~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~-~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~-v  148 (379)
T 2c5a_A           72 FCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHS-VIMYNNTMISFNMIEAARING-IKRFFYASSAC-I  148 (379)
T ss_dssp             TCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHH-HHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGG-G
T ss_pred             CCceEEECCCCCHHHHHHHhCCCCEEEECceecCcccccccCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehh-e
Confidence            478999999999999999999999999999975421   23444 788999999999999999988 89999999987 5


Q ss_pred             cccccCC--CCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC--ccH
Q 035985           92 SINAQNV--TGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP--SSV  167 (293)
Q Consensus        92 ~~~~~~~--~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~--~~~  167 (293)
                      |+.....  ...+++|+++.       +..|.+.|+.+|..+|.+++.++++++++++++||+++||++......  ..+
T Consensus       149 ~~~~~~~~~~~~~~~E~~~~-------~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~  221 (379)
T 2c5a_A          149 YPEFKQLETTNVSLKESDAW-------PAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAP  221 (379)
T ss_dssp             SCGGGSSSSSSCEECGGGGS-------SBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHH
T ss_pred             eCCCCCCCccCCCcCcccCC-------CCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHH
Confidence            5432210  01245665421       335678999999999999999988789999999999999998654321  234


Q ss_pred             HHHHHHH-hCCc-ccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCC
Q 035985          168 ALAATLI-TGND-FLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKV  244 (293)
Q Consensus       168 ~~~~~~~-~~~~-~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~  244 (293)
                      ..++..+ .+.. ..+.+.+     +..++|+|++|+|++++.+++.+ .+++|++ +++.+|++|+++.+.+.+|.. .
T Consensus       222 ~~~~~~~~~~~~~~~~~g~g-----~~~~~~i~v~Dva~ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~  294 (379)
T 2c5a_A          222 AAFCRKAQTSTDRFEMWGDG-----LQTRSFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKK-L  294 (379)
T ss_dssp             HHHHHHHHHCSSCEEEESCS-----CCEECCEEHHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCC-C
T ss_pred             HHHHHHHHhCCCceEEeCCC-----CeeEEEEEHHHHHHHHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCC-C
Confidence            4444333 4544 3333322     33689999999999999999876 5678877 668999999999999998842 2


Q ss_pred             CCC-CCCCCcccccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          245 PTD-FGDFPSEAKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       245 ~~~-~~~~~~~~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +.. .+.........+|++|+++ |||+|+++++++|+++++|++++
T Consensus       295 ~~~~~p~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  341 (379)
T 2c5a_A          295 PIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ  341 (379)
T ss_dssp             CEEEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred             ceeeCCCCCCcccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            221 1111111456789999997 99999999999999999999864

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=1e-34  Score=239.70  Aligned_cols=234  Identities=16%  Similarity=0.132  Sum_probs=183.9

Q ss_pred             CCeEEEecCCCCCcchhhhhcC-CCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcc
Q 035985           15 GELKIFRADLTDEASFDAPISR-SDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSI   93 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~-~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~   93 (293)
                      ++++++.+|++|++.+.+++++ +|+|||+|+...   .++. .+++.|+.++.+++++|++.+ +++|||+||.+ +|+
T Consensus        41 ~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~---~~~~-~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~-vyg  114 (286)
T 3gpi_A           41 AGVQTLIADVTRPDTLASIVHLRPEILVYCVAASE---YSDE-HYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTG-VYG  114 (286)
T ss_dssp             TTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHH---HC------CCSHHHHHHHHHHTTTSC-CCEEEEEEEGG-GCC
T ss_pred             cCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCC---CCHH-HHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccE-EEc
Confidence            5789999999999999999987 999999998743   2344 778899999999999999988 99999999997 565


Q ss_pred             cccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           94 NAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        94 ~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                      ....   .+++|++         +..|.+.|+.+|..+|.+ +.+     ++++++||+++||++..        .++..
T Consensus       115 ~~~~---~~~~E~~---------~~~p~~~Y~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~--------~~~~~  168 (286)
T 3gpi_A          115 QEVE---EWLDEDT---------PPIAKDFSGKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRL--------RMIRQ  168 (286)
T ss_dssp             CCCS---SEECTTS---------CCCCCSHHHHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBC--------HHHHH
T ss_pred             CCCC---CCCCCCC---------CCCCCChhhHHHHHHHHH-Hhc-----CCeEEEecccccCCCch--------hHHHH
Confidence            5432   5788887         777889999999999998 553     89999999999999853        12233


Q ss_pred             HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc---CCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCC
Q 035985          174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK---ESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFG  249 (293)
Q Consensus       174 ~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~---~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~  249 (293)
                      +.. .. .....     +..++|+|++|+|++++.++++   ...+++|++ +++.+|++|+++.+++.+|. +.+....
T Consensus       169 ~~~-~~-~~~~~-----~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~  240 (286)
T 3gpi_A          169 AQT-PE-QWPAR-----NAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGI-AYPAGAT  240 (286)
T ss_dssp             TTC-GG-GSCSS-----BCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTC-CCCCSCC
T ss_pred             HHh-cc-cCCCc-----CceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCC-CCCCCCC
Confidence            333 22 11211     3468999999999999999988   456779987 56889999999999999985 3333333


Q ss_pred             CCCcccccccchHHHHhcCCcccc-CHHHHHHHHHHHHHHc
Q 035985          250 DFPSEAKLILSSEKLISEGFCFKY-GIEDIYDQTVEYLKTK  289 (293)
Q Consensus       250 ~~~~~~~~~~d~~k~~~lG~~~~~-~~~~~i~~~i~~~~~~  289 (293)
                      + .......+|++|++.|||+|++ +++++|+++++|+..+
T Consensus       241 ~-~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~~~~~~  280 (286)
T 3gpi_A          241 P-PVQGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMREG  280 (286)
T ss_dssp             C-CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHHHHHTC-
T ss_pred             c-ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHHHHhcc
Confidence            2 2226678999999889999999 7999999999998754

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=3e-34  Score=243.42  Aligned_cols=259  Identities=19%  Similarity=0.223  Sum_probs=194.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      .+++++.+|++|++++.++++  ++|+|||+|+....  ...++. .+++.|+.++.++++++++.+ +++|||+||.+ 
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~-  134 (348)
T 1ek6_A           58 RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPL-DYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSAT-  134 (348)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGG-
T ss_pred             CceEEEECCCCCHHHHHHHHHhcCCCEEEECCCCcCccchhhchH-HHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHH-
Confidence            478999999999999999998  89999999997542  112344 788999999999999999988 89999999987 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCC-CchhHHHHHHHHHHHHHHHHh-CCceEEEEccCCccCCCCC------CC
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPP-TWGYAASKTLAERAACKFAQE-NNIDLITVIPSLMSGPSLT------PD  162 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p-~~~Y~~~K~~~E~~~~~~~~~-~~~~~~ilR~~~v~G~~~~------~~  162 (293)
                      +|+....   .+++|++         +..| .+.|+.+|..+|.+++.++.+ .+++++++||+++||++..      ..
T Consensus       135 ~~g~~~~---~~~~E~~---------~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~  202 (348)
T 1ek6_A          135 VYGNPQY---LPLDEAH---------PTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQ  202 (348)
T ss_dssp             GGCSCSS---SSBCTTS---------CCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCS
T ss_pred             HhCCCCC---CCcCCCC---------CCCCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcc
Confidence            5554322   5788887         5556 789999999999999999877 1399999999999999531      11


Q ss_pred             --CCccHHHHHHHHhCC--cccccccc-cccccCCCCcceeHHhHHHHHHHhhccC--CCC-CcEEE-eccCCCHHHHHH
Q 035985          163 --IPSSVALAATLITGN--DFLLNGLK-GMQMLSGSISISHVEDVCRAHIFLAEKE--SAS-GRYIC-CAVNTSVPELAK  233 (293)
Q Consensus       163 --~~~~~~~~~~~~~~~--~~~~~~~~-g~~~~~~~~~~v~v~D~a~~~~~~~~~~--~~~-~~y~~-~~~~~t~~e~~~  233 (293)
                        ...++..+.....+.  ...+.+.. ...+++..++|+|++|+|++++.+++++  ..+ ++||+ +++.+|++|+++
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~  282 (348)
T 1ek6_A          203 GIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQ  282 (348)
T ss_dssp             SSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHH
T ss_pred             cchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHH
Confidence              123455555555432  22222210 0001133689999999999999999765  344 58977 568899999999


Q ss_pred             HHHHhCCCCCCCCCC-CCCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          234 FLNKRFPEYKVPTDF-GDFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       234 ~i~~~~~~~~~~~~~-~~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      .+++.+|. +++... +..+.. ....+|++|+++ |||+|+++++++++++++|++++
T Consensus       283 ~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~  340 (348)
T 1ek6_A          283 AMEKASGK-KIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN  340 (348)
T ss_dssp             HHHHHHCS-CCCEEEECCCTTCCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHhCC-CCceeeCCCCCccchhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhc
Confidence            99999884 333221 111112 457799999987 99999999999999999999876

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=1.6e-34  Score=249.42  Aligned_cols=260  Identities=21%  Similarity=0.229  Sum_probs=194.6

Q ss_pred             eEEEecCCCCCcchhhhhc--C-CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           17 LKIFRADLTDEASFDAPIS--R-SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        17 v~~v~~Dl~d~~~~~~~~~--~-~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      ++++.+|++|++.+.++++  + +|+|||+|+.....  ..++. .+++.|+.++.+++++|++.+ +++|||+||.+ +
T Consensus        71 ~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~-v  147 (397)
T 1gy8_A           71 AALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPL-KYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAA-I  147 (397)
T ss_dssp             CEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGG-G
T ss_pred             EEEEECCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHH-HHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHH-H
Confidence            8999999999999999987  6 99999999976421  12344 789999999999999999988 89999999987 5


Q ss_pred             cccccC----CCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC-----
Q 035985           92 SINAQN----VTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD-----  162 (293)
Q Consensus        92 ~~~~~~----~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~-----  162 (293)
                      |+....    ....+++|++         +..|.+.|+.+|..+|.+++.++.+++++++++||+++||++....     
T Consensus       148 ~g~~~~~~~~~~~~~~~E~~---------~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~  218 (397)
T 1gy8_A          148 FGNPTMGSVSTNAEPIDINA---------KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHY  218 (397)
T ss_dssp             TBSCCC-----CCCCBCTTS---------CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCS
T ss_pred             hCCCCcccccccccCcCccC---------CCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccc
Confidence            554321    0015678887         5567889999999999999999888899999999999999975311     


Q ss_pred             --CCccHHHHH-----HHHhCCc------------ccccccc-cccccCCCCcceeHHhHHHHHHHhhccCC-C-----C
Q 035985          163 --IPSSVALAA-----TLITGND------------FLLNGLK-GMQMLSGSISISHVEDVCRAHIFLAEKES-A-----S  216 (293)
Q Consensus       163 --~~~~~~~~~-----~~~~~~~------------~~~~~~~-g~~~~~~~~~~v~v~D~a~~~~~~~~~~~-~-----~  216 (293)
                        ...++..+.     ....+..            ..+.+.. ...+++..++|||++|+|++++.+++.+. .     +
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~  298 (397)
T 1gy8_A          219 QGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKS  298 (397)
T ss_dssp             TTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGG
T ss_pred             cchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhccccccccccc
Confidence              123444444     4334432            2222200 00011346899999999999999987643 2     2


Q ss_pred             ---CcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCCC-CCcc-cccccchHHHHh-cCCcccc-CHHHHHHHHHHHHHH
Q 035985          217 ---GRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFGD-FPSE-AKLILSSEKLIS-EGFCFKY-GIEDIYDQTVEYLKT  288 (293)
Q Consensus       217 ---~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~-~~~~-~~~~~d~~k~~~-lG~~~~~-~~~~~i~~~i~~~~~  288 (293)
                         ++||+ +++.+|++|+++.+.+.+|. +++....+ .+.. ....+|++|+++ |||+|++ +++++|+++++|+++
T Consensus       299 ~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~  377 (397)
T 1gy8_A          299 KYFSVFNLGTSRGYSVREVIEVARKTTGH-PIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRT  377 (397)
T ss_dssp             GSEEEEEESCSCCEEHHHHHHHHHHHHCC-CCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHT
T ss_pred             CCCcEEEeCCCCcccHHHHHHHHHHHhCC-CCCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHh
Confidence               68987 57889999999999999884 33322211 1111 467899999987 9999999 999999999999987


Q ss_pred             c
Q 035985          289 K  289 (293)
Q Consensus       289 ~  289 (293)
                      +
T Consensus       378 ~  378 (397)
T 1gy8_A          378 H  378 (397)
T ss_dssp             C
T ss_pred             c
Confidence            6

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=2e-34  Score=241.79  Aligned_cols=230  Identities=22%  Similarity=0.242  Sum_probs=182.2

Q ss_pred             CCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccccCCCCccccCCCCCchhh
Q 035985           36 RSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEF  113 (293)
Q Consensus        36 ~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  113 (293)
                      ++|+|||+|+....  ...++. ..+. |+.++.+++++|++.+ +++|||+||.+ +|+....   .+++|++      
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~-~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~-v~~~~~~---~~~~E~~------  135 (321)
T 3vps_A           69 DVRLVYHLASHKSVPRSFKQPL-DYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCE-VYGQADT---LPTPEDS------  135 (321)
T ss_dssp             TEEEEEECCCCCCHHHHTTSTT-TTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGG-GGCSCSS---SSBCTTS------
T ss_pred             cCCEEEECCccCChHHHHhCHH-HHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHH-HhCCCCC---CCCCCCC------
Confidence            79999999997652  123444 6677 9999999999999999 99999999998 5554422   5788887      


Q ss_pred             hccCCCCCchhHHHHHHHHHHHHHHHHhCCc-eEEEEccCCccCCCCCCCCCccHHHHHH-HHhCCcccccccccccccC
Q 035985          114 LSSEKPPTWGYAASKTLAERAACKFAQENNI-DLITVIPSLMSGPSLTPDIPSSVALAAT-LITGNDFLLNGLKGMQMLS  191 (293)
Q Consensus       114 ~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~  191 (293)
                         +..|.+.|+.+|..+|++++.++.++++ +++++||+++||++....  ..+..++. ...+....+.+.+     +
T Consensus       136 ---~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~  205 (321)
T 3vps_A          136 ---PLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD--ALVPRLCANLLTRNELPVEGDG-----E  205 (321)
T ss_dssp             ---CCCCCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTT--SHHHHHHHHHHHHSEEEEETTS-----C
T ss_pred             ---CCCCCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCC--ChHHHHHHHHHcCCCeEEeCCC-----C
Confidence               7778899999999999999999998899 999999999999987652  34444443 3455554444332     3


Q ss_pred             CCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCC-CCCCCcc-cccccchHHHHh-c
Q 035985          192 GSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTD-FGDFPSE-AKLILSSEKLIS-E  267 (293)
Q Consensus       192 ~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~-~~~~~d~~k~~~-l  267 (293)
                      ..++|+|++|+|++++.++.++..+ +|++ +++.+|+.|+++.+. .+|.. .+.. .+..+.. ....+|++|+++ |
T Consensus       206 ~~~~~v~v~Dva~~~~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~l  282 (321)
T 3vps_A          206 QRRDFTYITDVVDKLVALANRPLPS-VVNFGSGQSLSVNDVIRILQ-ATSPA-AEVARKQPRPNEITEFRADTALQTRQI  282 (321)
T ss_dssp             CEECEEEHHHHHHHHHHGGGSCCCS-EEEESCSCCEEHHHHHHHHH-TTCTT-CEEEEECCCTTCCSBCCBCCHHHHHHH
T ss_pred             ceEceEEHHHHHHHHHHHHhcCCCC-eEEecCCCcccHHHHHHHHH-HhCCC-CccccCCCCCCCcceeeccHHHHHHHh
Confidence            4689999999999999999988775 9977 578899999999999 88843 2221 1122222 667899999998 9


Q ss_pred             CCcc-ccCHHHHHHHHHHHHHHcCC
Q 035985          268 GFCF-KYGIEDIYDQTVEYLKTKGM  291 (293)
Q Consensus       268 G~~~-~~~~~~~i~~~i~~~~~~~~  291 (293)
                      ||+| +++++++|+++++|+++++.
T Consensus       283 G~~p~~~~~~~~l~~~~~~~~~~~~  307 (321)
T 3vps_A          283 GERSGGIGIEEGIRLTLEWWQSRDL  307 (321)
T ss_dssp             CCCSCCCCHHHHHHHHHHHHHTSCT
T ss_pred             CCCCCcCCHHHHHHHHHHHHHhCCC
Confidence            9999 78999999999999998763

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=1.4e-34  Score=246.72  Aligned_cols=256  Identities=19%  Similarity=0.201  Sum_probs=194.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcC--CCcc-------E
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKT--KTVK-------R   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-------~   81 (293)
                      ++++++.+|++|++++.++++  ++|+|||+|+....  ...++. .+++.|+.++.+++++|++.  + ++       +
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~  127 (361)
T 1kew_A           50 NRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPA-AFIETNIVGTYALLEVARKYWSA-LGEDKKNNFR  127 (361)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTH-HHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCE
T ss_pred             CCeEEEECCCCCHHHHHHHHhhcCCCEEEECCCCcChhhhhhCHH-HHHHHHHHHHHHHHHHHHHhccC-cccccccCce
Confidence            579999999999999999998  89999999997541  112344 78999999999999999988  7 77       9


Q ss_pred             EEEecccchhcccccC-C------CCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCc
Q 035985           82 VILTSSAAAVSINAQN-V------TGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLM  154 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~-~------~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v  154 (293)
                      |||+||.+ +|+.... .      ...+++|++         +..|.+.|+.+|..+|.+++.++.+++++++++||++|
T Consensus       128 iv~~SS~~-v~g~~~~~~~~~~~~~~~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v  197 (361)
T 1kew_A          128 FHHISTDE-VYGDLPHPDEVENSVTLPLFTETT---------AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNN  197 (361)
T ss_dssp             EEEEEEGG-GGCCCCCGGGSCTTSCCCCBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred             EEEeCCHH-HhCCCcccccccccccCCCCCCCC---------CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeecee
Confidence            99999987 5543321 0      001577776         56778899999999999999998888999999999999


Q ss_pred             cCCCCCCCCCccHHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHH
Q 035985          155 SGPSLTPDIPSSVALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELA  232 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~  232 (293)
                      ||++..+.  ..+..++ ....+....+...+     +..++|+|++|+|++++.+++.+..+++|++ ++..+|+.|++
T Consensus       198 ~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~  270 (361)
T 1kew_A          198 YGPYHFPE--KLIPLVILNALEGKPLPIYGKG-----DQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVV  270 (361)
T ss_dssp             ESTTCCTT--SHHHHHHHHHHHTCCEEEETTS-----CCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHH
T ss_pred             ECCCCCcc--cHHHHHHHHHHcCCCceEcCCC-----ceeEeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHH
Confidence            99986432  2344333 33455544433322     3358999999999999999987656668987 55679999999


Q ss_pred             HHHHHhCCCCCC---CC----C-CCCCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          233 KFLNKRFPEYKV---PT----D-FGDFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       233 ~~i~~~~~~~~~---~~----~-~~~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +.+++.+|....   |.    . ....+.. ....+|++|+++ |||+|+++++++|+++++|++++
T Consensus       271 ~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  337 (361)
T 1kew_A          271 FTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             HHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhCCcCccccccccceeecCCCCcccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence            999998763210   00    0 1111111 346789999998 99999999999999999999875

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=7.3e-34  Score=240.76  Aligned_cols=262  Identities=16%  Similarity=0.224  Sum_probs=192.8

Q ss_pred             CCeEEEecCCCCC-cchhhhhcCCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           15 GELKIFRADLTDE-ASFDAPISRSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        15 ~~v~~v~~Dl~d~-~~~~~~~~~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      ++++++++|++|. +.+.++++++|+|||+|+.....  ..++. .+++.|+.++.+++++|++.+  ++|||+||.+ +
T Consensus        45 ~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~-v  120 (345)
T 2bll_A           45 PHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPL-RVFELDFEENLRIIRYCVKYR--KRIIFPSTSE-V  120 (345)
T ss_dssp             TTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHTT--CEEEEECCGG-G
T ss_pred             CCeEEEeccccCcHHHHHhhccCCCEEEEcccccCccchhcCHH-HHHHHHHHHHHHHHHHHHHhC--CeEEEEecHH-H
Confidence            5799999999995 46888889999999999975421  12344 778999999999999999887  7999999987 5


Q ss_pred             cccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC------Cc
Q 035985           92 SINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI------PS  165 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~------~~  165 (293)
                      |+....   .+++|+++.....+  ...|.+.|+.+|..+|.+++.++++++++++++||+++||++.....      ..
T Consensus       121 ~g~~~~---~~~~e~~~~~~~~~--~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~  195 (345)
T 2bll_A          121 YGMCSD---KYFDEDHSNLIVGP--VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSR  195 (345)
T ss_dssp             GBTCCC---SSBCTTTCCCBCCC--TTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCH
T ss_pred             cCCCCC---CCcCCcccccccCc--ccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCccccccccccccc
Confidence            554322   45777764211000  11356689999999999999998877999999999999999865311      12


Q ss_pred             cHHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEec-c-CCCHHHHHHHHHHhC
Q 035985          166 SVALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICCA-V-NTSVPELAKFLNKRF  239 (293)
Q Consensus       166 ~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~~-~-~~t~~e~~~~i~~~~  239 (293)
                      .+..++ ....+....+...+     +..++|+|++|+|++++.+++++.   .+++|++++ + .+|++|+++.+++.+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~g-----~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~  270 (345)
T 2bll_A          196 AITQLILNLVEGSPIKLIDGG-----KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASF  270 (345)
T ss_dssp             HHHHHHHHHHHTCCEEEGGGS-----CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcEEECCC-----CEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHh
Confidence            333333 44456554443322     346899999999999999998753   355888754 4 799999999999988


Q ss_pred             CCCCCCCCCCCC----------------CcccccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcC
Q 035985          240 PEYKVPTDFGDF----------------PSEAKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       240 ~~~~~~~~~~~~----------------~~~~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      |.......++..                .......+|++|+++ |||+|+++++++|+++++|++++.
T Consensus       271 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~  338 (345)
T 2bll_A          271 EKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV  338 (345)
T ss_dssp             HTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred             CCCcccccCccccccccccchhhccccccchhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcC
Confidence            643211111111                011456789999997 999999999999999999998764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=3.7e-34  Score=240.23  Aligned_cols=252  Identities=18%  Similarity=0.223  Sum_probs=189.8

Q ss_pred             ecCCCCCcchhhhhc--CCCEEEEecccCCC---CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccc
Q 035985           21 RADLTDEASFDAPIS--RSDIVFHVATPVNF---SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINA   95 (293)
Q Consensus        21 ~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~   95 (293)
                      .+|++|++++.++++  ++|+|||+|+....   ...++. .+++.|+.++.+++++|++.+ +++|||+||.+ +|+..
T Consensus        38 ~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~-vyg~~  114 (321)
T 1e6u_A           38 ELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPA-DFIYQNMMIESNIIHAAHQND-VNKLLFLGSSC-IYPKL  114 (321)
T ss_dssp             TCCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGG-GSCTT
T ss_pred             cCCccCHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHH-HcCCC
Confidence            369999999999998  99999999997541   112344 788999999999999999988 89999999987 55543


Q ss_pred             cCCCCccccCCCCCchhhhccCCCCC-chhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC--CccHHHHHH
Q 035985           96 QNVTGLVMDEKNWTDVEFLSSEKPPT-WGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI--PSSVALAAT  172 (293)
Q Consensus        96 ~~~~~~~~~E~~~~~~~~~~~~~~p~-~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~  172 (293)
                      ..   .+++|+++...     +..|. +.|+.+|..+|.+++.++++++++++++||+++||++.....  ...+..++.
T Consensus       115 ~~---~~~~E~~~~~~-----~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~  186 (321)
T 1e6u_A          115 AK---QPMAESELLQG-----TLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLR  186 (321)
T ss_dssp             CC---SSBCGGGTTSS-----CCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHH
T ss_pred             CC---CCcCccccccC-----CCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHH
Confidence            22   46777753211     23343 589999999999999998877999999999999999875421  133444443


Q ss_pred             HH-h----C-CcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC---------CCcEEE-eccCCCHHHHHHHHH
Q 035985          173 LI-T----G-NDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA---------SGRYIC-CAVNTSVPELAKFLN  236 (293)
Q Consensus       173 ~~-~----~-~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~---------~~~y~~-~~~~~t~~e~~~~i~  236 (293)
                      .+ .    | ....+.+.+     +..++|+|++|+|++++.+++++..         +++|++ +++.+|++|+++.+.
T Consensus       187 ~~~~~~~~g~~~~~~~~~g-----~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~  261 (321)
T 1e6u_A          187 RFHEATAQKAPDVVVWGSG-----TPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIA  261 (321)
T ss_dssp             HHHHHHHHTCSEEEEESCS-----CCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHH
T ss_pred             HHHHhhhcCCCceEEcCCC-----CEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHH
Confidence            33 2    2 333333322     3468999999999999999987653         468977 678899999999999


Q ss_pred             HhCCCCCCCCCC-CCCCcc-cccccchHHHHhcCCccccCHHHHHHHHHHHHHHc
Q 035985          237 KRFPEYKVPTDF-GDFPSE-AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       237 ~~~~~~~~~~~~-~~~~~~-~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +.+|.. .+..+ +..+.. ....+|++|+++|||+|+++++++|+++++|++++
T Consensus       262 ~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~  315 (321)
T 1e6u_A          262 KVVGYK-GRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN  315 (321)
T ss_dssp             HHHTCC-SEEEEETTSCCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             HHhCCC-CceEeCCCCCCCcccccCCHHHHHhcCCccCCcHHHHHHHHHHHHHHH
Confidence            998842 21111 111112 56789999999999999999999999999999875

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=5.3e-33  Score=235.32  Aligned_cols=252  Identities=15%  Similarity=0.228  Sum_probs=190.9

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      .+++++.+|+.+..     +.++|+|||+|+....  ...++. ..++.|+.++.+++++|++.+ + +|||+||.+ +|
T Consensus        75 ~~~~~~~~D~~~~~-----~~~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~-v~  145 (343)
T 2b69_A           75 ENFELINHDVVEPL-----YIEVDQIYHLASPASPPNYMYNPI-KTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSE-VY  145 (343)
T ss_dssp             TTEEEEECCTTSCC-----CCCCSEEEECCSCCSHHHHTTCHH-HHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGG-GG
T ss_pred             CceEEEeCccCChh-----hcCCCEEEECccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHH-Hh
Confidence            57899999998863     5689999999997542  123454 778999999999999999988 6 999999987 55


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHH-
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAA-  171 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~-  171 (293)
                      +....   .+++|+.|....    +..|.+.|+.+|..+|.+++.++++.+++++++||+++||++........+..++ 
T Consensus       146 g~~~~---~~~~E~~~~~~~----~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~  218 (343)
T 2b69_A          146 GDPEV---HPQSEDYWGHVN----PIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFIL  218 (343)
T ss_dssp             BSCSS---SSBCTTCCCBCC----SSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHH
T ss_pred             CCCCC---CCCcccccccCC----CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHH
Confidence            54322   467777543322    4456789999999999999998887799999999999999986543223444443 


Q ss_pred             HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCC-CC
Q 035985          172 TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTD-FG  249 (293)
Q Consensus       172 ~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~-~~  249 (293)
                      ....+....+.+.+     +..++|+|++|+|++++.+++.+ .+++|++ +++.+|++|+++.+++.+|.. .+.. .+
T Consensus       219 ~~~~~~~~~~~~~~-----~~~~~~v~v~Dva~a~~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~p  291 (343)
T 2b69_A          219 QALQGEPLTVYGSG-----SQTRAFQYVSDLVNGLVALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSG-SEIQFLS  291 (343)
T ss_dssp             HHHHTCCEEEESSS-----CCEEECEEHHHHHHHHHHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTCC-CCEEEEC
T ss_pred             HHHcCCCceEcCCC-----CeEEeeEeHHHHHHHHHHHHhcC-CCCeEEecCCCCCcHHHHHHHHHHHhCCC-CCceeCC
Confidence            44456554443322     34689999999999999998865 3678977 567899999999999998842 2211 11


Q ss_pred             CCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          250 DFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       250 ~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      ..... ....+|++|+++ |||+|+++++++|+++++|++++
T Consensus       292 ~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  333 (343)
T 2b69_A          292 EAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE  333 (343)
T ss_dssp             CCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence            11111 456789999997 99999999999999999999864

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=1.2e-33  Score=244.54  Aligned_cols=263  Identities=14%  Similarity=0.096  Sum_probs=192.9

Q ss_pred             CCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCcc--ccchhHHHHHHHHHHHHHhcCCCc-cEEEEecc
Q 035985           15 GELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPE--TDMIKPAIQGVVNVLKACTKTKTV-KRVILTSS   87 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~SS   87 (293)
                      ++++++.+|++|++++.+++++  +|+|||+|+.....  ..++.  ..+++.|+.++.+++++|++.+ + ++||++||
T Consensus        77 ~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS  155 (404)
T 1i24_A           77 KSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGT  155 (404)
T ss_dssp             CCCEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECC
T ss_pred             CceEEEECCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCc
Confidence            4789999999999999999987  99999999975421  12222  1367899999999999999887 6 59999999


Q ss_pred             cchhcccccCCCCccccCCCCCchh-----hhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC
Q 035985           88 AAAVSINAQNVTGLVMDEKNWTDVE-----FLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD  162 (293)
Q Consensus        88 ~~~~~~~~~~~~~~~~~E~~~~~~~-----~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~  162 (293)
                      .+ +|+...    .+++|+.|....     ..+.+..|.+.|+.+|..+|.+++.++.+++++++++||++||||+..+.
T Consensus       156 ~~-vyg~~~----~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~  230 (404)
T 1i24_A          156 MG-EYGTPN----IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDET  230 (404)
T ss_dssp             GG-GGCCCS----SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTG
T ss_pred             HH-HhCCCC----CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcc
Confidence            87 555432    346665321110     00014567789999999999999998887799999999999999986431


Q ss_pred             -------------C--CccHHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-C--CcEEEec
Q 035985          163 -------------I--PSSVALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-S--GRYICCA  223 (293)
Q Consensus       163 -------------~--~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~--~~y~~~~  223 (293)
                                   .  ...+..++ ....+....+.+.+     +..++|+|++|+|++++.+++++.. +  ++||+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g-----~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~  305 (404)
T 1i24_A          231 EMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKG-----GQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT  305 (404)
T ss_dssp             GGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTS-----CCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS
T ss_pred             ccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCC-----CceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC
Confidence                         0  13344444 44455554343322     3368999999999999999987654 3  4898866


Q ss_pred             cCCCHHHHHHHHHHh---CCCCCCCCC-CCCCCc---ccccccchHHHHhcCCccccCHHHHHHHHHHHHHHc
Q 035985          224 VNTSVPELAKFLNKR---FPEYKVPTD-FGDFPS---EAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       224 ~~~t~~e~~~~i~~~---~~~~~~~~~-~~~~~~---~~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +++|++|+++.+++.   +|. +++.. .+....   .....+|++|+++|||+|+++++++++++++|++..
T Consensus       306 ~~~s~~e~~~~i~~~~~~~g~-~~~~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~~  377 (404)
T 1i24_A          306 EQFSVNELASLVTKAGSKLGL-DVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQF  377 (404)
T ss_dssp             EEEEHHHHHHHHHHHHHTTTC-CCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHHHHHHHHHHhhCC-CccccccCcccCccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHhh
Confidence            889999999999998   553 22211 111111   134668999998899999999999999999998754

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-34  Score=239.43  Aligned_cols=246  Identities=16%  Similarity=0.142  Sum_probs=179.4

Q ss_pred             EecCCCCCcchhhhhcC-----CCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           20 FRADLTDEASFDAPISR-----SDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        20 v~~Dl~d~~~~~~~~~~-----~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      +.+|++|.+.+.+++++     +|+|||+|+.......++. .+++.|+.++.+++++|++.+ + +|||+||.+ +|+.
T Consensus        47 ~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~-v~g~  122 (310)
T 1eq2_A           47 IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGK-YMMDNNYQYSKELLHYCLERE-I-PFLYASSAA-TYGG  122 (310)
T ss_dssp             CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHH-HHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGG-GGTT
T ss_pred             eccccccHHHHHHHHhccccCCCcEEEECcccccCcccCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHH-HhCC
Confidence            67899998889888875     9999999998765434555 789999999999999999998 7 999999997 5554


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC--CCccHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD--IPSSVALAAT  172 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~  172 (293)
                      ...   .+++|++         +..|.+.|+.+|..+|.+++.++++++++++++||+++||++..+.  ....+..++.
T Consensus       123 ~~~---~~~~E~~---------~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~  190 (310)
T 1eq2_A          123 RTS---DFIESRE---------YEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNT  190 (310)
T ss_dssp             CCS---CBCSSGG---------GCCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHH
T ss_pred             CCC---CCCCCCC---------CCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHH
Confidence            322   3677876         6678889999999999999999888899999999999999986531  1134444444


Q ss_pred             HH-hCCcccccccccccccCC-CCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCC
Q 035985          173 LI-TGNDFLLNGLKGMQMLSG-SISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFG  249 (293)
Q Consensus       173 ~~-~~~~~~~~~~~g~~~~~~-~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~  249 (293)
                      .+ .+....+...+     +. .++|+|++|+|++++.+++++. +++|++ +++.+|++|+++.+.+.+|...++  +.
T Consensus       191 ~~~~~~~~~~~~~g-----~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~--~~  262 (310)
T 1eq2_A          191 QLNNGESPKLFEGS-----ENFKRDFVYVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIE--YI  262 (310)
T ss_dssp             HHHC------------------CBCEEEHHHHHHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC--------------
T ss_pred             HHHcCCCcEEecCC-----CcceEccEEHHHHHHHHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCCCce--eC
Confidence            44 44443333322     45 6899999999999999998776 779987 568999999999999998853121  11


Q ss_pred             CCCc------ccccccchHHHHhcCC-ccccCHHHHHHHHHHHHHHc
Q 035985          250 DFPS------EAKLILSSEKLISEGF-CFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       250 ~~~~------~~~~~~d~~k~~~lG~-~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +.+.      ......|++|+++||| .|.++++++++++++|++++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~l~~~l~~~~~~~~~~  309 (310)
T 1eq2_A          263 PFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD  309 (310)
T ss_dssp             ---------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHTC--
T ss_pred             CCChhhhcccccccccchHHHHhcCCCCCCCCHHHHHHHHHHHHHhc
Confidence            1111      1346789999989999 78889999999999999764

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.4e-33  Score=238.34  Aligned_cols=259  Identities=17%  Similarity=0.185  Sum_probs=190.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      .+++++.+|++|++++.++++  ++|+|||+|+....  ...++. .+++.|+.++.++++++++.+ +++||++||.+ 
T Consensus        50 ~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~-  126 (338)
T 1udb_A           50 KHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPL-EYYDNNVNGTLRLISAMRAAN-VKNFIFSSSAT-  126 (338)
T ss_dssp             SCCEEEECCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGG-
T ss_pred             CcceEEEccCCCHHHHHHHhhccCCCEEEECCccCccccchhcHH-HHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHH-
Confidence            368899999999999998887  59999999997531  112344 678999999999999999888 89999999987 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCC-CchhHHHHHHHHHHHHHHHHhC-CceEEEEccCCccCCCCC------CC
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPP-TWGYAASKTLAERAACKFAQEN-NIDLITVIPSLMSGPSLT------PD  162 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p-~~~Y~~~K~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~------~~  162 (293)
                      +|+....   .+++|+.         +..| .+.|+.+|..+|.+++.++.++ +++++++||+++||++..      +.
T Consensus       127 ~~g~~~~---~~~~e~~---------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~  194 (338)
T 1udb_A          127 VYGDNPK---IPYVESF---------PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQ  194 (338)
T ss_dssp             GGCSCCS---SSBCTTS---------CCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCC
T ss_pred             HhCCCCC---CCcCccc---------CCCCCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccc
Confidence            5554322   4677776         4334 6899999999999999998876 899999999999998531      11


Q ss_pred             --CCccHHHHHHHHhCCccccccccc---ccccCCCCcceeHHhHHHHHHHhhccC--CCC-CcEEE-eccCCCHHHHHH
Q 035985          163 --IPSSVALAATLITGNDFLLNGLKG---MQMLSGSISISHVEDVCRAHIFLAEKE--SAS-GRYIC-CAVNTSVPELAK  233 (293)
Q Consensus       163 --~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~v~v~D~a~~~~~~~~~~--~~~-~~y~~-~~~~~t~~e~~~  233 (293)
                        ...++..+.....+....+...+.   ..+++..++|||++|+|++++.+++..  ..+ ++||+ +++.+|++|+++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~  274 (338)
T 1udb_A          195 GIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVN  274 (338)
T ss_dssp             SSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHH
T ss_pred             cchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHH
Confidence              123344455544433222211100   001133689999999999999998753  233 58877 568899999999


Q ss_pred             HHHHhCCCCCCCCCCCC-CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          234 FLNKRFPEYKVPTDFGD-FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       234 ~i~~~~~~~~~~~~~~~-~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      .+++.+|. +++....+ .+.. ....+|++|+++ |||+|+++++++++++++|++++
T Consensus       275 ~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~  332 (338)
T 1udb_A          275 AFSKACGK-PVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_dssp             HHHHHHTS-CCCEEEECCCTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHhCC-CCcceeCCCCCCchhhhhcCHHHHHHHcCCCcCCCHHHHHHHHHHHHHhc
Confidence            99999874 33322111 1112 456789999987 99999999999999999999875

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=8.4e-34  Score=240.58  Aligned_cols=257  Identities=16%  Similarity=0.183  Sum_probs=190.9

Q ss_pred             CCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCcc-EEEEecccc
Q 035985           15 GELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVK-RVILTSSAA   89 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~~   89 (293)
                      ++++++.+|++|++++.+++++  +|+|||+|+.....  ..++. .+++.|+.++.+++++|++.+ ++ +|||+||.+
T Consensus        50 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~  127 (347)
T 1orr_A           50 GNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPC-MDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNK  127 (347)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGG
T ss_pred             CceEEEEcCCCCHHHHHHHHhccCCCEEEECCcccChhhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHH
Confidence            4689999999999999999987  99999999975421  12444 788999999999999999988 75 999999987


Q ss_pred             hhcccccCCC-------------CccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccC
Q 035985           90 AVSINAQNVT-------------GLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSG  156 (293)
Q Consensus        90 ~~~~~~~~~~-------------~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G  156 (293)
                       +|+......             ...++|+.         +..|.+.|+.+|..+|.+++.++.+++++++++||+++||
T Consensus       128 -v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~---------~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g  197 (347)
T 1orr_A          128 -VYGDLEQYKYNETETRYTCVDKPNGYDEST---------QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYG  197 (347)
T ss_dssp             -GGTTCTTSCEEECSSCEEETTCTTCBCTTS---------CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred             -HhCCCCcCCcccccccccccccccCccccC---------CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeC
Confidence             555332110             01244444         5567889999999999999999888899999999999999


Q ss_pred             CCCCCCCC-ccHHHHH-HHHhCC-----cccccccccccccCCCCcceeHHhHHHHHHHhhcc-C-CCCCcEEEec-c--
Q 035985          157 PSLTPDIP-SSVALAA-TLITGN-----DFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK-E-SASGRYICCA-V--  224 (293)
Q Consensus       157 ~~~~~~~~-~~~~~~~-~~~~~~-----~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~-~-~~~~~y~~~~-~--  224 (293)
                      ++...... ..+..++ ....+.     +..+.+.+     +..++|+|++|+|++++.++++ . ..+.+|++++ .  
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g-----~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~  272 (347)
T 1orr_A          198 GRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG-----KQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVN  272 (347)
T ss_dssp             TTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSS-----CCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGG
T ss_pred             cCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCC-----cceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCC
Confidence            98654221 2333333 333333     22222222     3468999999999999999875 2 2455898854 4  


Q ss_pred             CCCHHHHHHHHHHhCCCCCCCCC-CCCCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          225 NTSVPELAKFLNKRFPEYKVPTD-FGDFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       225 ~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      ++|++|+++.+.+.+|.. .+.. .+..+.. ....+|++|+++ |||+|+++++++|+++++|++++
T Consensus       273 ~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  339 (347)
T 1orr_A          273 SLSLLELFKLLEDYCNID-MRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI  339 (347)
T ss_dssp             EEEHHHHHHHHHHHHTCC-CCEEEECCCSSCCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             CccHHHHHHHHHHHhCCC-CCceeCCCCCCCcceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHH
Confidence            499999999999998842 2221 1111112 456789999987 99999999999999999999875

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-33  Score=237.74  Aligned_cols=255  Identities=14%  Similarity=0.107  Sum_probs=193.4

Q ss_pred             CCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCc---cEEEEecc
Q 035985           15 GELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTV---KRVILTSS   87 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~SS   87 (293)
                      ++++++.+|++|++++.+++++  +|+|||+|+.....  ..++. ..++.|+.++.+++++|++.+ +   ++|||+||
T Consensus        79 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS  156 (375)
T 1t2a_A           79 GNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDAVKTCG-LINSVKFYQAST  156 (375)
T ss_dssp             -CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEE
T ss_pred             CCceEEEccCCCHHHHHHHHHhcCCCEEEECCCcccccccccCHH-HHHHHHHHHHHHHHHHHHHhC-CCccceEEEecc
Confidence            4789999999999999999885  79999999975421  12344 778999999999999999987 7   79999999


Q ss_pred             cchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC-cc
Q 035985           88 AAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP-SS  166 (293)
Q Consensus        88 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~-~~  166 (293)
                      .+ +|+....   .+++|++         +..|.+.|+.+|..+|.+++.++.+++++++++|++++|||+...... ..
T Consensus       157 ~~-~~~~~~~---~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~  223 (375)
T 1t2a_A          157 SE-LYGKVQE---IPQKETT---------PFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRK  223 (375)
T ss_dssp             GG-GTCSCSS---SSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHH
T ss_pred             hh-hhCCCCC---CCCCccC---------CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHH
Confidence            97 4543322   4788887         667788999999999999999988889999999999999997654221 11


Q ss_pred             HHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCC-
Q 035985          167 VALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYK-  243 (293)
Q Consensus       167 ~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~-  243 (293)
                      +..++ ....+....+...+|    +..++|+|++|+|++++.+++++. .++|++ +++.+|++|+++.+++.+|... 
T Consensus       224 ~~~~~~~~~~g~~~~~~~g~~----~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  298 (375)
T 1t2a_A          224 ISRSVAKIYLGQLECFSLGNL----DAKRDWGHAKDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIV  298 (375)
T ss_dssp             HHHHHHHHHHTSCSCEEESCT----TCEECCEEHHHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHHcCCCceeEeCCC----CceeeeEEHHHHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcc
Confidence            22222 333454332222221    346899999999999999998764 478876 6788999999999999998531 


Q ss_pred             -----CCCC------------CCC---CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          244 -----VPTD------------FGD---FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       244 -----~~~~------------~~~---~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                           +|..            +..   .+.. ....+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       299 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  366 (375)
T 1t2a_A          299 WEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVEL  366 (375)
T ss_dssp             EESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccceeecCcccCCcccchhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHh
Confidence                 1110            100   0111 446689999997 99999999999999999999875

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=2.6e-33  Score=238.51  Aligned_cols=246  Identities=15%  Similarity=0.134  Sum_probs=190.6

Q ss_pred             EecCCCCCcchhhhhc-----CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           20 FRADLTDEASFDAPIS-----RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        20 v~~Dl~d~~~~~~~~~-----~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      +.+|++|.+.+.++++     ++|+|||+|+.......++. .+++.|+.++.+++++|++.+ + +|||+||.+ +|+.
T Consensus        94 ~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~-~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~-v~g~  169 (357)
T 2x6t_A           94 IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGK-YMMDNNYQYSKELLHYCLERE-I-PFLYASSAA-TYGG  169 (357)
T ss_dssp             CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHH-HHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGG-GGCS
T ss_pred             EeeecCcHHHHHHHHhhcccCCCCEEEECCcccCCccCCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchH-HhCC
Confidence            7789999988888887     59999999998654334455 789999999999999999988 7 999999997 5554


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC--CccHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI--PSSVALAAT  172 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~  172 (293)
                      ...   .+++|+.         +..|.+.|+.+|..+|.+++.++.+++++++++||++|||++.....  ...+..++.
T Consensus       170 ~~~---~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~  237 (357)
T 2x6t_A          170 RTS---DFIESRE---------YEKPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNT  237 (357)
T ss_dssp             CSS---CCCSSGG---------GCCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHH
T ss_pred             CCC---CCcCCcC---------CCCCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHH
Confidence            322   4678876         66788899999999999999998888999999999999999865321  233444444


Q ss_pred             HH-hCCcccccccccccccCC-CCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCC
Q 035985          173 LI-TGNDFLLNGLKGMQMLSG-SISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFG  249 (293)
Q Consensus       173 ~~-~~~~~~~~~~~g~~~~~~-~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~  249 (293)
                      .+ .+....+...+     +. .++|+|++|+|++++.+++++. +++|++ +++.+|++|+++.+.+.+|...+  .+.
T Consensus       238 ~~~~~~~~~~~~~~-----~~~~~~~i~v~Dva~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~  309 (357)
T 2x6t_A          238 QLNNGESPKLFEGS-----ENFKRDFVYVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQI--EYI  309 (357)
T ss_dssp             HHHTTCCCEEETTG-----GGCEECEEEHHHHHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCC--EEE
T ss_pred             HHHcCCCcEEeCCC-----CcceEccEEHHHHHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCCCc--eec
Confidence            43 44443333322     33 5799999999999999998776 779987 56889999999999999885412  111


Q ss_pred             CCCc------ccccccchHHHHhcCC-ccccCHHHHHHHHHHHHHHc
Q 035985          250 DFPS------EAKLILSSEKLISEGF-CFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       250 ~~~~------~~~~~~d~~k~~~lG~-~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +.+.      ......|++|+++||| .|.++++++|+++++|++++
T Consensus       310 ~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~~~l~e~l~~~~~~~~~~  356 (357)
T 2x6t_A          310 PFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD  356 (357)
T ss_dssp             CCCGGGTTSCCSBCCCCCHHHHHTTCCCCCCCHHHHHHHHHHHHC--
T ss_pred             CCCcccccccccccccCHHHHHHcCCCCCCCCHHHHHHHHHHHHhhc
Confidence            1111      1346789999999999 78889999999999999763

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-32  Score=235.03  Aligned_cols=255  Identities=15%  Similarity=0.155  Sum_probs=193.2

Q ss_pred             CCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCc---cEEEEecc
Q 035985           15 GELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTV---KRVILTSS   87 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~SS   87 (293)
                      .+++++.+|++|++++.+++++  +|+|||+|+.....  ..++. ..++.|+.++.++++++++.+ +   ++||++||
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS  132 (372)
T 1db3_A           55 PKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPE-YTADVDAMGTLRLLEAIRFLG-LEKKTRFYQAST  132 (372)
T ss_dssp             CCEEECCCCSSCHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHH-HHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEE
T ss_pred             CceEEEECCCCCHHHHHHHHHhcCCCEEEECCcccCccccccCHH-HHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCC
Confidence            4789999999999999999875  79999999976422  23344 678899999999999999987 7   79999999


Q ss_pred             cchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC-cc
Q 035985           88 AAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP-SS  166 (293)
Q Consensus        88 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~-~~  166 (293)
                      .+ +|+....   .+++|+.         +..|.+.|+.+|..+|.+++.++.+++++++++|++++|||+...... ..
T Consensus       133 ~~-v~g~~~~---~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~  199 (372)
T 1db3_A          133 SE-LYGLVQE---IPQKETT---------PFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRK  199 (372)
T ss_dssp             GG-GGTTCCS---SSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHH
T ss_pred             hh-hhCCCCC---CCCCccC---------CCCCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhH
Confidence            87 5554322   4678887         667788999999999999999988889999999999999998654321 11


Q ss_pred             HHHHHH-HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCC-
Q 035985          167 VALAAT-LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYK-  243 (293)
Q Consensus       167 ~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~-  243 (293)
                      +..++. ...+....+...+|    +..++|+|++|+|++++.+++++. +++||+ +++.+|++|+++.+.+.+|... 
T Consensus       200 ~~~~~~~~~~g~~~~~~~g~~----~~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  274 (372)
T 1db3_A          200 ITRAIANIAQGLESCLYLGNM----DSLRDWGHAKDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLR  274 (372)
T ss_dssp             HHHHHHHHHTTSCCCEEESCT----TCEECCEEHHHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEE
T ss_pred             HHHHHHHHHcCCCCceeecCC----CceeeeeEHHHHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcc
Confidence            222333 33444332222221    346899999999999999998764 478976 6778999999999999987421 


Q ss_pred             -----CCCC----------------------CCC---CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          244 -----VPTD----------------------FGD---FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       244 -----~~~~----------------------~~~---~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                           +|..                      +.+   .+.. ....+|++|+++ |||+|+++++++|+++++|++++
T Consensus       275 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  352 (372)
T 1db3_A          275 FEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA  352 (372)
T ss_dssp             EESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccceeeccccccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHh
Confidence                 1100                      000   0111 345689999997 99999999999999999999865

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=3.2e-32  Score=229.27  Aligned_cols=245  Identities=18%  Similarity=0.194  Sum_probs=186.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++.+|++|++++.++++  ++|+|||+|+.......... . ++.|+.++.+++++|.+.+ +++||++||.+ +|
T Consensus        65 ~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~-~~  140 (330)
T 2pzm_A           65 AGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAE-D-AATNVQGSINVAKAASKAG-VKRLLNFQTAL-CY  140 (330)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGG-GG
T ss_pred             CCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccCCCccccCh-h-HHHHHHHHHHHHHHHHHcC-CCEEEEecCHH-Hh
Confidence            478999999999999999998  99999999997653211122 4 8899999999999999888 89999999997 45


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAAT  172 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~  172 (293)
                      +..... ..+++|++           .|.+.|+.+|..+|.+++.+    +++++++||+++|||+..   ...+..+..
T Consensus       141 ~~~~~~-~~~~~E~~-----------~~~~~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~---~~~~~~~~~  201 (330)
T 2pzm_A          141 GRPATV-PIPIDSPT-----------APFTSYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA---IGPIPTFYK  201 (330)
T ss_dssp             CSCSSS-SBCTTCCC-----------CCCSHHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCC---SSHHHHHHH
T ss_pred             CCCccC-CCCcCCCC-----------CCCChHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC---CCHHHHHHH
Confidence            433210 01566663           46679999999999998765    799999999999999852   133444444


Q ss_pred             HHhCCcccccccccccccCCCCcceeHHhHHH-HHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCCC
Q 035985          173 LITGNDFLLNGLKGMQMLSGSISISHVEDVCR-AHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFGD  250 (293)
Q Consensus       173 ~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~-~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~  250 (293)
                      .+..+. .+....     . .++|+|++|+|+ +++.+++.+. +++|++ ++..+|++|+++.+.+.+|..  +..+.+
T Consensus       202 ~~~~~~-~~~~~~-----~-~~~~i~~~Dva~~a~~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~--~~~~~~  271 (330)
T 2pzm_A          202 RLKAGQ-KCFCSD-----T-VRDFLDMSDFLAIADLSLQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGAT--LAEPVP  271 (330)
T ss_dssp             HHHTTC-CCCEES-----C-EECEEEHHHHHHHHHHHTSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC--CSSCCC
T ss_pred             HHHcCC-EEeCCC-----C-EecceeHHHHHHHHHHHHhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCC--CceeCC
Confidence            333322 222222     3 588999999999 9999998765 678987 567899999999999998854  222211


Q ss_pred             -CCcccccccchHHH-----HhcCCccccCHHHHHHHHHHHHHHcCCC
Q 035985          251 -FPSEAKLILSSEKL-----ISEGFCFKYGIEDIYDQTVEYLKTKGML  292 (293)
Q Consensus       251 -~~~~~~~~~d~~k~-----~~lG~~~~~~~~~~i~~~i~~~~~~~~~  292 (293)
                       .+......+|++|+     ++|||+|+++++++++++++|+++.|++
T Consensus       272 ~~~~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~~~~~~~~~~~~~  319 (330)
T 2pzm_A          272 VVAPGADDVPSVVLDPSKTETEFGWKAKVDFKDTITGQLAWYDKYGVT  319 (330)
T ss_dssp             EECCCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCSC
T ss_pred             CCcchhhccCCHHHHhhchHHHcCCcccCCHHHHHHHHHHHHHhhCcc
Confidence             11124567888888     7799999999999999999999999876

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=6e-33  Score=229.29  Aligned_cols=235  Identities=18%  Similarity=0.090  Sum_probs=184.9

Q ss_pred             ecCCCCCcchhhhhc--CCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccccc
Q 035985           21 RADLTDEASFDAPIS--RSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQ   96 (293)
Q Consensus        21 ~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~   96 (293)
                      ++|++|++.+.++++  ++|+|||+|+.....  ..++. ..++.|+.++.+++++|++.+ + +|||+||.+ +|+...
T Consensus        39 ~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~-vy~~~~  114 (287)
T 3sc6_A           39 LLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERD-LAYVINAIGARNVAVASQLVG-A-KLVYISTDY-VFQGDR  114 (287)
T ss_dssp             TSCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHH-HHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGG-GSCCCC
T ss_pred             ccCCCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhh-hcCCCC
Confidence            479999999999998  699999999986522  23455 889999999999999999998 6 799999997 554433


Q ss_pred             CCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHHh-
Q 035985           97 NVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLIT-  175 (293)
Q Consensus        97 ~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~-  175 (293)
                      .   .+++|++         +..|.+.|+.+|..+|++++.+..    +++++||+++||++..    ..+..+..... 
T Consensus       115 ~---~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~~----~~~ilR~~~v~G~~~~----~~~~~~~~~~~~  174 (287)
T 3sc6_A          115 P---EGYDEFH---------NPAPINIYGASKYAGEQFVKELHN----KYFIVRTSWLYGKYGN----NFVKTMIRLGKE  174 (287)
T ss_dssp             S---SCBCTTS---------CCCCCSHHHHHHHHHHHHHHHHCS----SEEEEEECSEECSSSC----CHHHHHHHHHTT
T ss_pred             C---CCCCCCC---------CCCCCCHHHHHHHHHHHHHHHhCC----CcEEEeeeeecCCCCC----cHHHHHHHHHHc
Confidence            2   5788987         778889999999999999987653    6899999999998753    34555555444 


Q ss_pred             CCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCC-C-----
Q 035985          176 GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTD-F-----  248 (293)
Q Consensus       176 ~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~-~-----  248 (293)
                      +....+.+       +..++|+|++|+|++++.+++++. +++|++ +++.+|++|+++.+++.+|.. .+.. .     
T Consensus       175 ~~~~~~~~-------~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~  245 (287)
T 3sc6_A          175 REEISVVA-------DQIGSPTYVADLNVMINKLIHTSL-YGTYHVSNTGSCSWFEFAKKIFSYANMK-VNVLPVSTEEF  245 (287)
T ss_dssp             CSEEEEEC-------SCEECCEEHHHHHHHHHHHHTSCC-CEEEECCCBSCEEHHHHHHHHHHHHTCC-CEEEEECHHHH
T ss_pred             CCCeEeec-------CcccCceEHHHHHHHHHHHHhCCC-CCeEEEcCCCcccHHHHHHHHHHHcCCC-cceeeeehhhc
Confidence            44433332       346899999999999999999876 779977 667899999999999999852 1111 1     


Q ss_pred             CCCCcc-cccccchHHHHhcCCccccCHHHHHHHHHHHHHH
Q 035985          249 GDFPSE-AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKT  288 (293)
Q Consensus       249 ~~~~~~-~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~  288 (293)
                      ...... ....+|++|+++|||.|.++++++++++++|+++
T Consensus       246 ~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~~~~~~~~  286 (287)
T 3sc6_A          246 GAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLERFFIETKS  286 (287)
T ss_dssp             CCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHHHHHHTC-
T ss_pred             CcccCCCCcccccHHHHHhhCCCCCccHHHHHHHHHHHHhc
Confidence            111111 4567899999999999999999999999999865

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=4.7e-32  Score=228.51  Aligned_cols=245  Identities=18%  Similarity=0.163  Sum_probs=185.1

Q ss_pred             CCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++.+|++|++++.+++++  +|+|||+|+.......... . ++.|+.++.+++++|++.+ +++||++||.+ +|
T Consensus        66 ~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~-~~  141 (333)
T 2q1w_A           66 PNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYN-D-TLTNCVGGSNVVQAAKKNN-VGRFVYFQTAL-CY  141 (333)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGG-GG
T ss_pred             CCceEEEEeCCCHHHHHHHHhccCCcEEEECceecCCCccCCh-H-HHHHHHHHHHHHHHHHHhC-CCEEEEECcHH-Hh
Confidence            4789999999999999999987  9999999997653211112 3 8899999999999999988 89999999987 55


Q ss_pred             cccc-CCCCccccCCCCCchhhhccCCCCC-chhHHHHHHHHHHHHH-HHHhCCceEEEEccCCccCCCCCCCCCccHHH
Q 035985           93 INAQ-NVTGLVMDEKNWTDVEFLSSEKPPT-WGYAASKTLAERAACK-FAQENNIDLITVIPSLMSGPSLTPDIPSSVAL  169 (293)
Q Consensus        93 ~~~~-~~~~~~~~E~~~~~~~~~~~~~~p~-~~Y~~~K~~~E~~~~~-~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~  169 (293)
                      +... ... .+++|++           .|. +.|+.+|..+|.+++. ++     +++++||+++|||+..   ...+..
T Consensus       142 g~~~~~~~-~~~~E~~-----------~p~~~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~---~~~~~~  201 (333)
T 2q1w_A          142 GVKPIQQP-VRLDHPR-----------NPANSSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV---SGPLPI  201 (333)
T ss_dssp             CSCCCSSS-BCTTSCC-----------CCTTCHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC---SSHHHH
T ss_pred             CCCcccCC-CCcCCCC-----------CCCCCchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc---CcHHHH
Confidence            4110 100 2566663           355 7999999999999877 54     7999999999999832   234444


Q ss_pred             HHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCC
Q 035985          170 AATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDF  248 (293)
Q Consensus       170 ~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~  248 (293)
                      ++..+..+. .+.. +     +..++++|++|+|++++.+++++. +++|++ ++..+|++|+++.+.+.+|..  +..+
T Consensus       202 ~~~~~~~~~-~~~~-~-----~~~~~~i~v~Dva~ai~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~--~~~~  271 (333)
T 2q1w_A          202 FFQRLSEGK-KCFV-T-----KARRDFVFVKDLARATVRAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALP--SYPE  271 (333)
T ss_dssp             HHHHHHTTC-CCEE-E-----ECEECEEEHHHHHHHHHHHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCS--SCCC
T ss_pred             HHHHHHcCC-eeeC-C-----CceEeeEEHHHHHHHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCC--Ccee
Confidence            444333322 2322 2     336899999999999999998776 678977 568899999999999999854  2211


Q ss_pred             CCCC-cc-----cccccchHHHHhcCCccccCHHHHHHHHHHHHHHcCCCC
Q 035985          249 GDFP-SE-----AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGMLK  293 (293)
Q Consensus       249 ~~~~-~~-----~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~~~~  293 (293)
                      .+.+ ..     ....+|++|++++||+|+++++++|+++++|+++.|++|
T Consensus       272 ~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~~~~~  322 (333)
T 2q1w_A          272 PEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFREYGVSG  322 (333)
T ss_dssp             CEEEECCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred             CCCCCcccccccccccCCHHHHHhcCCCcCCCHHHHHHHHHHHHHHHCCCC
Confidence            1110 01     457789999998899999999999999999999999875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=4.5e-32  Score=229.48  Aligned_cols=263  Identities=27%  Similarity=0.319  Sum_probs=193.0

Q ss_pred             CCeEEE-ecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhc-CCCccEEEEecccchhc
Q 035985           15 GELKIF-RADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTK-TKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v-~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++ .+|++|++.+.++++++|+|||+|+..... .++. .+++.|+.++.+++++|++ .+ +++|||+||.++++
T Consensus        61 ~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A~~~~~~-~~~~-~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~  137 (342)
T 1y1p_A           61 GRFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFS-NKYD-EVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSAL  137 (342)
T ss_dssp             TTEEEEECSCTTSTTTTTTTTTTCSEEEECCCCCSCC-SCHH-HHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTC
T ss_pred             CceEEEEecCCcChHHHHHHHcCCCEEEEeCCCCCCC-CCHH-HHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhc
Confidence            468888 899999999999999999999999976543 3455 7899999999999999985 45 89999999997554


Q ss_pred             ccccCCCCccccCCCCCchhhh-------ccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccCCCCCCCC
Q 035985           93 INAQNVTGLVMDEKNWTDVEFL-------SSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSGPSLTPDI  163 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~-------~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~  163 (293)
                      .......+.+++|++|......       ..+..|.+.|+.+|..+|.+++.+++++  +++++++||+++||+...+..
T Consensus       138 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~  217 (342)
T 1y1p_A          138 IPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPET  217 (342)
T ss_dssp             CCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTT
T ss_pred             CCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCC
Confidence            3221111146888876432210       0022356789999999999999998765  789999999999999876543


Q ss_pred             Cc-cHHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEeccCCCHHHHHHHHHHhCC
Q 035985          164 PS-SVALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICCAVNTSVPELAKFLNKRFP  240 (293)
Q Consensus       164 ~~-~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~~~~~t~~e~~~~i~~~~~  240 (293)
                      .. .+..++ ....+....+...      ...++|+|++|+|++++.++.++...+ .|++++..+|+.|+++.+.+.+|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~  291 (342)
T 1y1p_A          218 QSGSTSGWMMSLFNGEVSPALAL------MPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYP  291 (342)
T ss_dssp             CCCHHHHHHHHHHTTCCCHHHHT------CCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCT
T ss_pred             CCccHHHHHHHHHcCCCcccccc------CCcCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCC
Confidence            22 444444 3444544332221      125899999999999999998765444 45667778999999999999998


Q ss_pred             CCCCCCCCCCCCcccccccchHHHHh-cCC---ccccCHHHHHHHHHHHHH
Q 035985          241 EYKVPTDFGDFPSEAKLILSSEKLIS-EGF---CFKYGIEDIYDQTVEYLK  287 (293)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~---~~~~~~~~~i~~~i~~~~  287 (293)
                      ...++...... ......+|++|+++ |||   .+..+++++|+++++|++
T Consensus       292 ~~~~~~~~~~~-~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~  341 (342)
T 1y1p_A          292 SKTFPADFPDQ-GQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET  341 (342)
T ss_dssp             TSCCCCCCCCC-CCCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred             CccCCCCCCcc-ccccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence            64343332221 11346789999997 887   455699999999999874

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=5.6e-31  Score=224.66  Aligned_cols=256  Identities=14%  Similarity=0.084  Sum_probs=189.6

Q ss_pred             CCeEEEecCCCCCcchhhhhcC---CCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcC--CCccEEE------
Q 035985           15 GELKIFRADLTDEASFDAPISR---SDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT--KTVKRVI------   83 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~---~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v------   83 (293)
                      ++++++.+|++|++++.+++++   +|+|||+|+...   .++. ..++.|+.++.+++++|++.  + +++||      
T Consensus        48 ~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~~~~---~~~~-~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~  122 (364)
T 2v6g_A           48 NPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTWANR---STEQ-ENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRK  122 (364)
T ss_dssp             SCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCCCCC---SSHH-HHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTH
T ss_pred             CceEEEEeecCCHHHHHHHHhcCCCCCEEEECCCCCc---chHH-HHHHHhHHHHHHHHHHHHHhccc-cceEEeccCce
Confidence            4789999999999999999988   999999999753   2445 78999999999999999998  6 89998      


Q ss_pred             -Eecccchhccccc-CCCCccccCCCCCchhhhccCCCC-CchhHHHHHHHHHHHHHHHHhCC-ceEEEEccCCccCCCC
Q 035985           84 -LTSSAAAVSINAQ-NVTGLVMDEKNWTDVEFLSSEKPP-TWGYAASKTLAERAACKFAQENN-IDLITVIPSLMSGPSL  159 (293)
Q Consensus        84 -~~SS~~~~~~~~~-~~~~~~~~E~~~~~~~~~~~~~~p-~~~Y~~~K~~~E~~~~~~~~~~~-~~~~ilR~~~v~G~~~  159 (293)
                       |+||.+ +|+... ..  .+++|++         +..| .+.|    ..+|++++.++++++ ++++++||+++||++.
T Consensus       123 i~~Ss~~-vyg~~~~~~--~~~~E~~---------~~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~  186 (364)
T 2v6g_A          123 HYMGPFE-SYGKIESHD--PPYTEDL---------PRLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSP  186 (364)
T ss_dssp             HHHCCGG-GTTTSCCCC--SSBCTTS---------CCCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCT
T ss_pred             EEEechh-hccccccCC--CCCCccc---------cCCccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCC
Confidence             789987 555431 12  4678886         3333 5567    458999998887776 9999999999999987


Q ss_pred             CCCCCccHHH-HHHHH---hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC-CCCcEEE-eccCCCHHHHHH
Q 035985          160 TPDIPSSVAL-AATLI---TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES-ASGRYIC-CAVNTSVPELAK  233 (293)
Q Consensus       160 ~~~~~~~~~~-~~~~~---~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~-~~~~y~~-~~~~~t~~e~~~  233 (293)
                      .......+.. +...+   .+.+..+.+.+ .+ .....+++|++|+|++++.+++++. .+++||+ +++.+|++|+++
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~-~~-~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~  264 (364)
T 2v6g_A          187 YSMMNLVGTLCVYAAICKHEGKVLRFTGCK-AA-WDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWK  264 (364)
T ss_dssp             TCSSCHHHHHHHHHHHHHHHTCCBCCCSCH-HH-HHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHH
T ss_pred             CcccchHHHHHHHHHHHHhcCCceecCCCc-cc-ccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHH
Confidence            6432222332 23333   45544333321 11 0124788999999999999998765 3458977 566899999999


Q ss_pred             HHHHhCCCCCCCC--CCCC----------------------CCc---c------------cc-cccchHHHHhcCCcccc
Q 035985          234 FLNKRFPEYKVPT--DFGD----------------------FPS---E------------AK-LILSSEKLISEGFCFKY  273 (293)
Q Consensus       234 ~i~~~~~~~~~~~--~~~~----------------------~~~---~------------~~-~~~d~~k~~~lG~~~~~  273 (293)
                      .+++.+|......  ..+.                      .+.   .            .. ..+|++|+++|||+|.+
T Consensus       265 ~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~  344 (364)
T 2v6g_A          265 VLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFR  344 (364)
T ss_dssp             HHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCC
T ss_pred             HHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCccccccccccchhhhccccchhhcchHHHHhcCCCCCC
Confidence            9999987432111  1111                      011   0            22 47899999889999988


Q ss_pred             CHHHHHHHHHHHHHHcCCCC
Q 035985          274 GIEDIYDQTVEYLKTKGMLK  293 (293)
Q Consensus       274 ~~~~~i~~~i~~~~~~~~~~  293 (293)
                      +++++++++++|+++.|+||
T Consensus       345 ~~~e~l~~~~~~~~~~g~lp  364 (364)
T 2v6g_A          345 NSKNAFISWIDKAKAYKIVP  364 (364)
T ss_dssp             CHHHHHHHHHHHHHHTTSCC
T ss_pred             CHHHHHHHHHHHHHHcCCCC
Confidence            99999999999999999987

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=1.1e-32  Score=229.05  Aligned_cols=242  Identities=14%  Similarity=0.110  Sum_probs=185.1

Q ss_pred             EEecCCCCCcchhhhhcC--CCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           19 IFRADLTDEASFDAPISR--SDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        19 ~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++.+|++|++.+.+++++  +|+|||+|+....  ...++. ..++.|+.++.+++++|++.+ + +|||+||.+ +|+.
T Consensus        35 ~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~-vy~~  110 (299)
T 1n2s_A           35 EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPE-LAQLLNATSVEAIAKAANETG-A-WVVHYSTDY-VFPG  110 (299)
T ss_dssp             SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHH-HHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGG-GSCC
T ss_pred             cccccCCCHHHHHHHHHhcCCCEEEECcccCCHhhhhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-cEEEEeccc-EEeC
Confidence            346899999999999986  9999999997642  223455 789999999999999999988 6 899999997 5554


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      ...   .+++|++         +..|.+.|+.+|..+|++++.++    .+++++||+++||++..    ..+..+...+
T Consensus       111 ~~~---~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~----~~~~ilRp~~v~G~~~~----~~~~~~~~~~  170 (299)
T 1n2s_A          111 TGD---IPWQETD---------ATSPLNVYGKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGN----NFAKTMLRLA  170 (299)
T ss_dssp             CTT---CCBCTTS---------CCCCSSHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC----CHHHHHHHHH
T ss_pred             CCC---CCCCCCC---------CCCCccHHHHHHHHHHHHHHHhC----CCeEEEeeeeecCCCcC----cHHHHHHHHH
Confidence            322   4688887         66788999999999999998764    38999999999999754    2444444443


Q ss_pred             -hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC--C--CCCcEEE-eccCCCHHHHHHHHHHhCCCCC-----
Q 035985          175 -TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE--S--ASGRYIC-CAVNTSVPELAKFLNKRFPEYK-----  243 (293)
Q Consensus       175 -~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~--~--~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~-----  243 (293)
                       .+....+.+       +..++|+|++|+|++++.+++++  .  .+++|++ +++.+|++|+++.+.+.+|...     
T Consensus       171 ~~~~~~~~~~-------~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~  243 (299)
T 1n2s_A          171 KERQTLSVIN-------DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLAL  243 (299)
T ss_dssp             HHCSEEEEEC-------SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCC
T ss_pred             hcCCCEEeec-------CcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCcccccc
Confidence             444433322       33689999999999999999876  2  3678977 5688999999999999876321     


Q ss_pred             -----CCCC-CCCCCc-ccccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcCCC
Q 035985          244 -----VPTD-FGDFPS-EAKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKGML  292 (293)
Q Consensus       244 -----~~~~-~~~~~~-~~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~~~  292 (293)
                           ++.. +..... .....+|++|+++ |||+|+ +++++++++++|+++++.|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~~~~i  299 (299)
T 1n2s_A          244 TELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTTTTI  299 (299)
T ss_dssp             CEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSCCC-
T ss_pred             ccccccccccccCcCCCCCceeeeHHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCC
Confidence                 0100 111111 1557899999998 999998 9999999999999988764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=8.2e-32  Score=228.13  Aligned_cols=255  Identities=15%  Similarity=0.144  Sum_probs=192.4

Q ss_pred             CCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCc-cEEEEecccc
Q 035985           15 GELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTV-KRVILTSSAA   89 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~SS~~   89 (293)
                      ++++++.+|++|++++.+++++  +|+|||+|+.....  ..++. ..++.|+.++.+++++|++.+ + ++|||+||.+
T Consensus        52 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~  129 (345)
T 2z1m_A           52 NDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPI-LTAEVDAIGVLRILEALRTVK-PDTKFYQASTSE  129 (345)
T ss_dssp             TTEEECCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTSHH-HHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGG
T ss_pred             CceeEEECCCCCHHHHHHHHHhcCCCEEEECCCCcchhhhhhCHH-HHHHHHHHHHHHHHHHHHHhC-CCceEEEEechh
Confidence            4789999999999999999885  69999999976421  23444 788999999999999999877 6 8999999997


Q ss_pred             hhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC-ccHH
Q 035985           90 AVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP-SSVA  168 (293)
Q Consensus        90 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~-~~~~  168 (293)
                       +|+....   .+++|+.         +..|.+.|+.+|..+|.+++.++.+++++++++|++++|||+...... ..+.
T Consensus       130 -vyg~~~~---~~~~e~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~  196 (345)
T 2z1m_A          130 -MFGKVQE---IPQTEKT---------PFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKIT  196 (345)
T ss_dssp             -GGCSCSS---SSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHH
T ss_pred             -hcCCCCC---CCCCccC---------CCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHH
Confidence             5554432   4678876         667788999999999999999988889999999999999998644211 1112


Q ss_pred             HHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCC---
Q 035985          169 LAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYK---  243 (293)
Q Consensus       169 ~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~---  243 (293)
                      .+. ....+....+...+|    +..++|+|++|+|++++.+++++. +++|++ +++.+|++|+++.+++.+|...   
T Consensus       197 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~  271 (345)
T 2z1m_A          197 YSLARIKYGLQDKLVLGNL----NAKRDWGYAPEYVEAMWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWV  271 (345)
T ss_dssp             HHHHHHHTTSCSCEEESCT----TCEECCEEHHHHHHHHHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEE
T ss_pred             HHHHHHHcCCCCeeeeCCC----CceeeeEEHHHHHHHHHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCcccc
Confidence            222 223443322222221    335899999999999999998764 478976 6788999999999999998531   


Q ss_pred             ---CCCC------------CCC---CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          244 ---VPTD------------FGD---FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       244 ---~~~~------------~~~---~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                         +|..            +..   .+.. ....+|++|+++ |||+|+++++++++++++|++++
T Consensus       272 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  337 (345)
T 2z1m_A          272 GEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKR  337 (345)
T ss_dssp             SCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence               1100            100   0111 445679999997 99999999999999999999864

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=2.6e-32  Score=234.27  Aligned_cols=253  Identities=17%  Similarity=0.133  Sum_probs=192.0

Q ss_pred             CeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCcc-----EEEEec
Q 035985           16 ELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVK-----RVILTS   86 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~v~~S   86 (293)
                      +++++.+|++|++++.+++++  +|+|||+|+.....  ..++. ..++.|+.++.+++++|++.+ ++     +|||+|
T Consensus        84 ~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~S  161 (381)
T 1n7h_A           84 LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAG  161 (381)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEE
T ss_pred             ceEEEECCCCCHHHHHHHHHhcCCCEEEECCcccCccccccCHH-HHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeC
Confidence            789999999999999999885  69999999975421  12344 788999999999999999877 66     999999


Q ss_pred             ccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC-c
Q 035985           87 SAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP-S  165 (293)
Q Consensus        87 S~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~-~  165 (293)
                      |.+ +|+...    .+++|++         +..|.+.|+.+|..+|.+++.++.+++++++++|++++|||+...... .
T Consensus       162 S~~-vyg~~~----~~~~E~~---------~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~  227 (381)
T 1n7h_A          162 SSE-MFGSTP----PPQSETT---------PFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTR  227 (381)
T ss_dssp             EGG-GGTTSC----SSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHH
T ss_pred             cHH-HhCCCC----CCCCCCC---------CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhH
Confidence            987 555432    2678887         667888999999999999999988889999999999999998654321 1


Q ss_pred             cHHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCC
Q 035985          166 SVALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYK  243 (293)
Q Consensus       166 ~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~  243 (293)
                      .+..++ ....+....+...+|    +..++|+|++|+|++++.+++.+. +++|++ +++.+|++|+++.+.+.+|...
T Consensus       228 ~~~~~~~~~~~g~~~~~~~g~~----~~~~~~v~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  302 (381)
T 1n7h_A          228 KITRALGRIKVGLQTKLFLGNL----QASRDWGFAGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNW  302 (381)
T ss_dssp             HHHHHHHHHHHTSCCCEEESCT----TCEEECEEHHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCG
T ss_pred             HHHHHHHHHHcCCCCeEEeCCC----CceeeeEEHHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCc
Confidence            122222 333454332222221    336899999999999999998764 478876 6678999999999999998521


Q ss_pred             -CCCCCCC---CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          244 -VPTDFGD---FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       244 -~~~~~~~---~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                       ....+..   .+.. ....+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  354 (381)
T 1n7h_A          303 KDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL  354 (381)
T ss_dssp             GGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             ccccccCcccCCccccccccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHhh
Confidence             0011111   1111 456789999998 99999889999999999999764

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.98  E-value=1.7e-31  Score=245.85  Aligned_cols=264  Identities=15%  Similarity=0.139  Sum_probs=192.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      .+++++.+|++|++++.++++  ++|+|||+|+.....  ...+. +.++.|+.++.+++++|++.+ +++||++||.+ 
T Consensus        61 ~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~-~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~-  137 (699)
T 1z45_A           61 HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPL-RYYHNNILGTVVLLELMQQYN-VSKFVFSSSAT-  137 (699)
T ss_dssp             SCCCEEECCTTCHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGG-
T ss_pred             CceEEEEcCCCCHHHHHHHHHhCCCCEEEECCcccCcCccccCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHH-
Confidence            478999999999999999998  899999999975421  12334 678999999999999999988 89999999987 


Q ss_pred             hcccccC-CCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh--CCceEEEEccCCccCCCCCCC-----
Q 035985           91 VSINAQN-VTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE--NNIDLITVIPSLMSGPSLTPD-----  162 (293)
Q Consensus        91 ~~~~~~~-~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~-----  162 (293)
                      +|+.... ....+++|+.         +..|.+.|+.+|..+|.+++.++.+  .+++++++||+++||++....     
T Consensus       138 vyg~~~~~~~~~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~  208 (699)
T 1z45_A          138 VYGDATRFPNMIPIPEEC---------PLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDP  208 (699)
T ss_dssp             GGCCGGGSTTCCSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCC
T ss_pred             HhCCCccccccCCccccC---------CCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCccccccccc
Confidence            5543211 0013567776         5667889999999999999998876  689999999999999864311     


Q ss_pred             ---CCccHHHHHHHHhCC--cccccccc-cccccCCCCcceeHHhHHHHHHHhhccC-------CCCCcEEE-eccCCCH
Q 035985          163 ---IPSSVALAATLITGN--DFLLNGLK-GMQMLSGSISISHVEDVCRAHIFLAEKE-------SASGRYIC-CAVNTSV  228 (293)
Q Consensus       163 ---~~~~~~~~~~~~~~~--~~~~~~~~-g~~~~~~~~~~v~v~D~a~~~~~~~~~~-------~~~~~y~~-~~~~~t~  228 (293)
                         ...++..+.....+.  ...+.+.. ...+.+..++|||++|+|++++.+++..       ..+++||+ +++.+|+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~  288 (699)
T 1z45_A          209 LGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTV  288 (699)
T ss_dssp             SSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEH
T ss_pred             ccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcH
Confidence               113344455554442  33333210 0000133689999999999999988642       12357877 6788999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCCC-cc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcCC
Q 035985          229 PELAKFLNKRFPEYKVPTDFGDFP-SE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKGM  291 (293)
Q Consensus       229 ~e~~~~i~~~~~~~~~~~~~~~~~-~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~~  291 (293)
                      +|+++.+++.+|. +++....+.. .. ....+|++|+++ |||+|+++++++|+++++|+++++.
T Consensus       289 ~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~  353 (699)
T 1z45_A          289 FEVYHAFCKASGI-DLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPF  353 (699)
T ss_dssp             HHHHHHHHHHHTC-CCCC---------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHhCC-CCCceecCCCCCccccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCc
Confidence            9999999999884 3333322211 11 567899999997 9999999999999999999998753

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.98  E-value=2.5e-32  Score=231.12  Aligned_cols=258  Identities=17%  Similarity=0.126  Sum_probs=192.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-CCCEEEEecccCCC-CCCCccccchhHHHHHHHHHHHHHhcCC----CccEEEEeccc
Q 035985           15 GELKIFRADLTDEASFDAPIS-RSDIVFHVATPVNF-SSDDPETDMIKPAIQGVVNVLKACTKTK----TVKRVILTSSA   88 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-~~d~Vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~SS~   88 (293)
                      .+++++.+|++|++.+.++++ ++|+|||+|+.... ...++. ..++.|+.++.+++++|++.+    .+++||++||.
T Consensus        64 ~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~-~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~  142 (342)
T 2hrz_A           64 GAVDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFD-KGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSI  142 (342)
T ss_dssp             SEEEEEECCTTSTTHHHHHHHTCCSEEEECCCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG
T ss_pred             CceeEEEcCCCCHHHHHHHHhcCCCEEEECCccCcccccccHH-HHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCch
Confidence            468899999999999999984 89999999997541 112344 778999999999999998764    36899999999


Q ss_pred             chhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccC-CCCCCCC-Ccc
Q 035985           89 AAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSG-PSLTPDI-PSS  166 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G-~~~~~~~-~~~  166 (293)
                      + +|+....   .+++|++         +..|.+.|+.+|..+|.+++.++.+++++.+++|++.+|| |+..... ..+
T Consensus       143 ~-~~~~~~~---~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~  209 (342)
T 2hrz_A          143 A-VFGAPLP---YPIPDEF---------HTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGF  209 (342)
T ss_dssp             G-GCCSSCC---SSBCTTC---------CCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGH
T ss_pred             H-hhCCCCC---CCcCCCC---------CCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHH
Confidence            7 5554322   4688887         6678889999999999999999888789999999999999 6543221 123


Q ss_pred             HHHHHH-HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC----CCCcEEEeccCCCHHHHHHHHHHhCCC
Q 035985          167 VALAAT-LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES----ASGRYICCAVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       167 ~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~----~~~~y~~~~~~~t~~e~~~~i~~~~~~  241 (293)
                      +..++. ...+....+...+     +...+++|++|+|++++.+++.+.    .+++||++++.+|++|+++.+.+.+|.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~  284 (342)
T 2hrz_A          210 FSNILREPLVGQEAVLPVPE-----SIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGE  284 (342)
T ss_dssp             HHHHHHHHHTTCCEEECSCT-----TCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHhcCCCeeccCCC-----ccceeeEehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcCc
Confidence            344443 3345444343322     234778999999999999998653    356888877889999999999999874


Q ss_pred             CCC-CCCCCCCCc--c----cccccchHHHHhcCCccccCHHHHHHHHHHHHHHcCCC
Q 035985          242 YKV-PTDFGDFPS--E----AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKGML  292 (293)
Q Consensus       242 ~~~-~~~~~~~~~--~----~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~~~  292 (293)
                      ... ...+.+.+.  .    ....+|++|+++|||+|+++++++|+++++|++ .|-+
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~-~~~~  341 (342)
T 2hrz_A          285 KAVALIRREPNEMIMRMCEGWAPGFEAKRARELGFTAESSFEEIIQVHIEDEL-GGSL  341 (342)
T ss_dssp             HHHTTEEECCCHHHHHHHTTSCCCBCCHHHHHTTCCCCSSHHHHHHHHHHHHS-TTCC
T ss_pred             ccccceeeccCcchhhhhcccccccChHHHHHcCCCCCCCHHHHHHHHHHHhc-CCCC
Confidence            211 111111111  0    123579999999999999999999999999998 4443

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.98  E-value=1.7e-31  Score=243.98  Aligned_cols=263  Identities=16%  Similarity=0.227  Sum_probs=194.8

Q ss_pred             CCeEEEecCCCCCcc-hhhhhcCCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           15 GELKIFRADLTDEAS-FDAPISRSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~-~~~~~~~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      ++++++.+|++|+++ +.++++++|+|||+|+.....  ..++. ..++.|+.++.+++++|++.+  ++|||+||.+ +
T Consensus       360 ~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~-~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~-v  435 (660)
T 1z7e_A          360 PHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPL-RVFELDFEENLRIIRYCVKYR--KRIIFPSTSE-V  435 (660)
T ss_dssp             TTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCCCTHHHHHSHH-HHHHHHTHHHHHHHHHHHHTT--CEEEEECCGG-G
T ss_pred             CceEEEECCCCCcHHHHHHhhcCCCEEEECceecCccccccCHH-HHHHhhhHHHHHHHHHHHHhC--CEEEEEecHH-H
Confidence            579999999999875 777888999999999975421  12344 788999999999999999987  7999999987 5


Q ss_pred             cccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC------CCc
Q 035985           92 SINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD------IPS  165 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~------~~~  165 (293)
                      |+....   .+++|+++.....+  ...|.+.|+.+|..+|.+++.++++++++++++||+++||++....      ...
T Consensus       436 yg~~~~---~~~~E~~~~~~~~p--~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~  510 (660)
T 1z7e_A          436 YGMCSD---KYFDEDHSNLIVGP--VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSR  510 (660)
T ss_dssp             GBTCCS---SSBCTTTCCEEECC--TTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSC
T ss_pred             cCCCCC---cccCCCccccccCc--ccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccc
Confidence            544322   46788764321100  1246678999999999999999877799999999999999986430      122


Q ss_pred             cHHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEe-cc-CCCHHHHHHHHHHhC
Q 035985          166 SVALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICC-AV-NTSVPELAKFLNKRF  239 (293)
Q Consensus       166 ~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~-~~-~~t~~e~~~~i~~~~  239 (293)
                      .+..++ ....+....+...+     +..++|+|++|+|++++.+++.+.   .+++|+++ ++ .+|++|+++.+.+.+
T Consensus       511 ~~~~~~~~~~~g~~~~~~g~g-----~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~  585 (660)
T 1z7e_A          511 AITQLILNLVEGSPIKLIDGG-----KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASF  585 (660)
T ss_dssp             HHHHHHHHHHHTCCEEEEGGG-----CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHcCCCcEEeCCC-----CeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHh
Confidence            344443 44455554443322     346899999999999999998764   35588875 54 799999999999987


Q ss_pred             CCCCCCCCCCCC----------------CcccccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcCC
Q 035985          240 PEYKVPTDFGDF----------------PSEAKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKGM  291 (293)
Q Consensus       240 ~~~~~~~~~~~~----------------~~~~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~~  291 (293)
                      |.......++..                .......+|++|+++ |||+|+++++++|+++++|++++.-
T Consensus       586 g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~  654 (660)
T 1z7e_A          586 EKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD  654 (660)
T ss_dssp             HHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred             cCCCcccccCccccccchhccccccccccchhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhcc
Confidence            642211111111                011456789999997 9999999999999999999998753

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.97  E-value=9.6e-31  Score=215.95  Aligned_cols=222  Identities=13%  Similarity=0.079  Sum_probs=170.7

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhc--CCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTK--TKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~v~~SS~~~~~   92 (293)
                      .+++++.+|++|.+     ++++|+|||+|+.....  .          ..+.++++++++  .+ +++|||+||.+ +|
T Consensus        47 ~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~--~----------~~~~~l~~a~~~~~~~-~~~~v~~Ss~~-vy  107 (286)
T 3ius_A           47 SGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGG--D----------PVLAALGDQIAARAAQ-FRWVGYLSTTA-VY  107 (286)
T ss_dssp             TTEEEEESSSSCCC-----CTTCCEEEECCCCBTTB--C----------HHHHHHHHHHHHTGGG-CSEEEEEEEGG-GG
T ss_pred             CCCeEEEecccccc-----cCCCCEEEECCCccccc--c----------HHHHHHHHHHHhhcCC-ceEEEEeecce-ec
Confidence            47999999999955     77999999999865421  1          125688899888  56 89999999997 66


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAAT  172 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~  172 (293)
                      +....   .+++|++         +..|.+.|+.+|..+|++++.+   .+++++++||+++||++....        ..
T Consensus       108 g~~~~---~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~--------~~  164 (286)
T 3ius_A          108 GDHDG---AWVDETT---------PLTPTAARGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPF--------SK  164 (286)
T ss_dssp             CCCTT---CEECTTS---------CCCCCSHHHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSS--------TT
T ss_pred             CCCCC---CCcCCCC---------CCCCCCHHHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchHH--------HH
Confidence            54432   5788988         7788899999999999999887   589999999999999985431        12


Q ss_pred             HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCC--
Q 035985          173 LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFG--  249 (293)
Q Consensus       173 ~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~--  249 (293)
                      ...+....+...      +..++|+|++|+|++++.+++++..+++|++ +++.+|+.|+++.+++.+|.. .+..++  
T Consensus       165 ~~~~~~~~~~~~------~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~  237 (286)
T 3ius_A          165 LGKGGIRRIIKP------GQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLP-LPPAVDFD  237 (286)
T ss_dssp             SSSSCCCEEECT------TCCBCEEEHHHHHHHHHHHHHSCCTTCEEEECCSCCBCHHHHHHHHHHHHTCC-CCCEEEGG
T ss_pred             HhcCCccccCCC------CcccceEEHHHHHHHHHHHHhCCCCCCEEEEeCCCCccHHHHHHHHHHHcCCC-CCcccchh
Confidence            223443333321      2368999999999999999998877779977 578899999999999999853 222111  


Q ss_pred             C--CCc------ccccccchHHHHh-cCCcccc-CHHHHHHHHHHH
Q 035985          250 D--FPS------EAKLILSSEKLIS-EGFCFKY-GIEDIYDQTVEY  285 (293)
Q Consensus       250 ~--~~~------~~~~~~d~~k~~~-lG~~~~~-~~~~~i~~~i~~  285 (293)
                      .  ...      .....+|++|+++ |||+|++ +++++++++++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~  283 (286)
T 3ius_A          238 KADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQAD  283 (286)
T ss_dssp             GSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHT
T ss_pred             hhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHh
Confidence            1  111      1456789999998 9999999 799999999873

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.97  E-value=2.5e-31  Score=222.48  Aligned_cols=242  Identities=17%  Similarity=0.110  Sum_probs=162.3

Q ss_pred             EEecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           19 IFRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        19 ~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++.+|++|++++.+++++  +|+|||+|+.....  ..++. ..++.|+.++.+++++|++.+ + +|||+||.+ +|+.
T Consensus        41 ~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~-v~~~  116 (315)
T 2ydy_A           41 FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPD-AASQLNVDASGNLAKEAAAVG-A-FLIYISSDY-VFDG  116 (315)
T ss_dssp             -----------CHHHHHHHCCSEEEECC--------------------CHHHHHHHHHHHHHT-C-EEEEEEEGG-GSCS
T ss_pred             eEEecCCCHHHHHHHHHhhCCCEEEECCcccChhhhhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHH-HcCC
Confidence            667999999999999884  99999999976422  23444 789999999999999999988 6 999999998 4544


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      .  .  .+++|++         +..|.+.|+.+|..+|.+++.+    +++++++||+.|||+...+.. ..+..+...+
T Consensus       117 ~--~--~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~-~~~~~~~~~~  178 (315)
T 2ydy_A          117 T--N--PPYREED---------IPAPLNLYGKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEE-SAVTVMFDKV  178 (315)
T ss_dssp             S--S--CSBCTTS---------CCCCCSHHHHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGG-STTGGGHHHH
T ss_pred             C--C--CCCCCCC---------CCCCcCHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccc-cHHHHHHHHH
Confidence            2  2  5788887         6677889999999999999776    467899999999999875211 1222223333


Q ss_pred             --hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC----CCCCcEEE-eccCCCHHHHHHHHHHhCCCCCC---
Q 035985          175 --TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE----SASGRYIC-CAVNTSVPELAKFLNKRFPEYKV---  244 (293)
Q Consensus       175 --~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~----~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~---  244 (293)
                        .+....+..       +..++++|++|+|++++.++.++    ..+++|++ +++.+|+.|+++.+.+.+|....   
T Consensus       179 ~~~~~~~~~~~-------~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~  251 (315)
T 2ydy_A          179 QFSNKSANMDH-------WQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLR  251 (315)
T ss_dssp             HCCSSCEEEEC-------SSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEE
T ss_pred             HhcCCCeeecc-------CceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhhee
Confidence              343332221       33689999999999999998754    45678977 66899999999999999985321   


Q ss_pred             CCC-CCC-CCc-ccccccchHHHHhcCCccccCHHHHHHHHHHHHHHc
Q 035985          245 PTD-FGD-FPS-EAKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       245 ~~~-~~~-~~~-~~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +.. +.. ... .....+|++|++++||+|.++++++++++++|++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l~~~~~~~~~~  299 (315)
T 2ydy_A          252 PITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLID  299 (315)
T ss_dssp             EECSCCCSSSCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHGGGCC-
T ss_pred             ccccccccccCCCcccccchHHHHhcCCCCCCCHHHHHHHHHHHHccc
Confidence            111 111 111 145778999999889999999999999999999765

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.97  E-value=5.2e-31  Score=218.19  Aligned_cols=234  Identities=15%  Similarity=0.114  Sum_probs=179.6

Q ss_pred             ecCCCCCcchhhhhc--CCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccccc
Q 035985           21 RADLTDEASFDAPIS--RSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQ   96 (293)
Q Consensus        21 ~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~   96 (293)
                      .+|++|++++.++++  ++|+|||+|+.....  ..++. ..++.|+.++.+++++|++.+ + +|||+||.+ +|+...
T Consensus        46 ~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~-~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~-v~~~~~  121 (292)
T 1vl0_A           46 DLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYD-LAYKINAIGPKNLAAAAYSVG-A-EIVQISTDY-VFDGEA  121 (292)
T ss_dssp             TCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGG-GSCSCC
T ss_pred             cCCCCCHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEechHH-eECCCC
Confidence            479999999999998  799999999975421  12344 789999999999999999988 7 999999997 554432


Q ss_pred             CCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH-h
Q 035985           97 NVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI-T  175 (293)
Q Consensus        97 ~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-~  175 (293)
                      .   .+++|++         +..|.+.|+.+|..+|.+++.+.    .+++++||+.+||+ ..    ..+..+.... .
T Consensus       122 ~---~~~~E~~---------~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~lR~~~v~G~-~~----~~~~~~~~~~~~  180 (292)
T 1vl0_A          122 K---EPITEFD---------EVNPQSAYGKTKLEGENFVKALN----PKYYIVRTAWLYGD-GN----NFVKTMINLGKT  180 (292)
T ss_dssp             S---SCBCTTS---------CCCCCSHHHHHHHHHHHHHHHHC----SSEEEEEECSEESS-SS----CHHHHHHHHHHH
T ss_pred             C---CCCCCCC---------CCCCccHHHHHHHHHHHHHHhhC----CCeEEEeeeeeeCC-Cc----ChHHHHHHHHhc
Confidence            2   4788887         66788899999999999998764    46999999999999 22    2344444433 3


Q ss_pred             CCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCC----CCCCCCC
Q 035985          176 GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYK----VPTDFGD  250 (293)
Q Consensus       176 ~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~----~~~~~~~  250 (293)
                      +....+.+       +..++|+|++|+|++++.+++.+ .+++|++ +++.+|++|+++.+.+.+|...    ++.....
T Consensus       181 ~~~~~~~~-------~~~~~~i~v~Dva~~~~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~  252 (292)
T 1vl0_A          181 HDELKVVH-------DQVGTPTSTVDLARVVLKVIDEK-NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFP  252 (292)
T ss_dssp             CSEEEEES-------SCEECCEEHHHHHHHHHHHHHHT-CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSC
T ss_pred             CCcEEeec-------CeeeCCccHHHHHHHHHHHHhcC-CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccC
Confidence            44433322       23689999999999999999876 6678977 5678999999999999988431    1211111


Q ss_pred             CC-cc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHH
Q 035985          251 FP-SE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKT  288 (293)
Q Consensus       251 ~~-~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~  288 (293)
                      .. .. ....+|++|+++ |||+|+ +++++++++++|+++
T Consensus       253 ~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~  292 (292)
T 1vl0_A          253 RPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQM  292 (292)
T ss_dssp             CSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHTC
T ss_pred             cccCCCccccccHHHHHHHcCCCCC-CHHHHHHHHHHHhcC
Confidence            11 11 457799999998 999999 999999999999863

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.95  E-value=8.9e-27  Score=202.72  Aligned_cols=254  Identities=14%  Similarity=0.139  Sum_probs=178.3

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      +++.++.+|++|++.+. .+.++|+|||+|+..... .++. ..++.|+.++.+++++|++ + +++|||+||.++  +.
T Consensus       130 ~~v~~v~~Dl~d~~~l~-~~~~~d~Vih~A~~~~~~-~~~~-~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~--G~  202 (427)
T 4f6c_A          130 SNIEVIVGDFECMDDVV-LPENMDTIIHAGARTDHF-GDDD-EFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV--GT  202 (427)
T ss_dssp             TTEEEEEECC---CCCC-CSSCCSEEEECCCCC---------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGG--GS
T ss_pred             CceEEEeCCCCCcccCC-CcCCCCEEEECCcccCCC-CCHH-HHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHh--CC
Confidence            58999999999998888 778999999999987533 3444 8899999999999999999 5 799999999985  32


Q ss_pred             ccC--CCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC-----ccH
Q 035985           95 AQN--VTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP-----SSV  167 (293)
Q Consensus        95 ~~~--~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~-----~~~  167 (293)
                      ...  ....+++|+++..      ...|.+.|+.+|+.+|.+++.+++ .|++++++||++|||+.......     ..+
T Consensus       203 ~~~~~~~~~~~~E~~~~~------~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~  275 (427)
T 4f6c_A          203 YFDIDTEDVTFSEADVYK------GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRF  275 (427)
T ss_dssp             EECSSCSCCEECTTCSCS------SCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHH
T ss_pred             CccCCCCCcccccccccc------CCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHH
Confidence            211  1125788887422      245788999999999999999865 59999999999999998765421     123


Q ss_pred             HHHHHH-HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCC
Q 035985          168 ALAATL-ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVP  245 (293)
Q Consensus       168 ~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~  245 (293)
                      ..++.. ..++.... ...     +..++|+|++|+|++++.++..+..+++|++ +++++++.|+++.+.+ ++-..++
T Consensus       276 ~~~~~~~~~~~~~~~-~~~-----~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g~~~~~  348 (427)
T 4f6c_A          276 SMVMNDLLQLDCIGV-SMA-----EMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KEIELVS  348 (427)
T ss_dssp             HHHHHHHHHSSEEEH-HHH-----TCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SCCEEEC
T ss_pred             HHHHHHHHhcCCCCC-ccc-----cceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cCCcccC
Confidence            334433 34443332 111     4479999999999999999988776678977 6789999999999998 4511111


Q ss_pred             CC-C------CCCC----------cccccccchHHHH----hcCCccccCHHHHHHHHHHHHHHc
Q 035985          246 TD-F------GDFP----------SEAKLILSSEKLI----SEGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       246 ~~-~------~~~~----------~~~~~~~d~~k~~----~lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      .. +      .+..          ......+|+++..    ++||.+...-++.++++++|+++.
T Consensus       349 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~  413 (427)
T 4f6c_A          349 DESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI  413 (427)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCchhhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            00 0      0000          0023456666554    379988855567899999988763

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.95  E-value=1.6e-27  Score=211.80  Aligned_cols=239  Identities=14%  Similarity=0.065  Sum_probs=167.3

Q ss_pred             EEecCCCCCcchhhhhcCCCEEEEecccCCC---CCCCccccchhHHHHHHHHHHHH-HhcCCCccEEEEecccchhccc
Q 035985           19 IFRADLTDEASFDAPISRSDIVFHVATPVNF---SSDDPETDMIKPAIQGVVNVLKA-CTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        19 ~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+.+|+.+  .+.++++++|+|||+|+....   ....+. .+++.|+.++.+++++ +++.+ +++|||+||.+ +|+.
T Consensus       186 ~v~~d~~~--~~~~~l~~~D~Vih~A~~~~~~~~~~~~~~-~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~-vyg~  260 (516)
T 3oh8_A          186 KRFWDPLN--PASDLLDGADVLVHLAGEPIFGRFNDSHKE-AIRESRVLPTKFLAELVAESTQ-CTTMISASAVG-FYGH  260 (516)
T ss_dssp             CEECCTTS--CCTTTTTTCSEEEECCCC-----CCGGGHH-HHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGG-GGCS
T ss_pred             ceeecccc--hhHHhcCCCCEEEECCCCccccccchhHHH-HHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcce-EecC
Confidence            35677764  356778899999999997632   112233 6788999999999999 55656 89999999997 5652


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      ....  .+++|+.         +. |.+.|+.+|...|.++..+ ...|++++++||+++||++.     ..+..+...+
T Consensus       261 ~~~~--~~~~E~~---------~~-~~~~y~~~~~~~E~~~~~~-~~~gi~~~ilRp~~v~Gp~~-----~~~~~~~~~~  322 (516)
T 3oh8_A          261 DRGD--EILTEES---------ES-GDDFLAEVCRDWEHATAPA-SDAGKRVAFIRTGVALSGRG-----GMLPLLKTLF  322 (516)
T ss_dssp             EEEE--EEECTTS---------CC-CSSHHHHHHHHHHHTTHHH-HHTTCEEEEEEECEEEBTTB-----SHHHHHHHTT
T ss_pred             CCCC--CccCCCC---------CC-CcChHHHHHHHHHHHHHHH-HhCCCCEEEEEeeEEECCCC-----ChHHHHHHHH
Confidence            2122  5788886         33 6778999999999887654 45599999999999999973     2444444444


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCC---CCCCC--
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYK---VPTDF--  248 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~---~~~~~--  248 (293)
                      ..+...+.+.+     +..++|||++|+|++++.+++++...++||+ +++.+|++|+++.+++.+|...   +|...  
T Consensus       323 ~~g~~~~~g~g-----~~~~~~i~v~Dva~ai~~~l~~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~  397 (516)
T 3oh8_A          323 STGLGGKFGDG-----TSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPK  397 (516)
T ss_dssp             C---CCCCTTS-----CCEECEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCEEHHHHHHHTTC----------------
T ss_pred             HhCCCcccCCC-----CceEceEeHHHHHHHHHHHHhCcccCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            33222222222     3468999999999999999998877788976 6789999999999999887432   12111  


Q ss_pred             ---CCC--Ccc--cccccchHHHHhcCCccccC-HHHHHHHHHHH
Q 035985          249 ---GDF--PSE--AKLILSSEKLISEGFCFKYG-IEDIYDQTVEY  285 (293)
Q Consensus       249 ---~~~--~~~--~~~~~d~~k~~~lG~~~~~~-~~~~i~~~i~~  285 (293)
                         ...  ...  ....++++|+++|||+|+++ ++++|+++++.
T Consensus       398 ~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~~  442 (516)
T 3oh8_A          398 ILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELGY  442 (516)
T ss_dssp             -----CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHHHHHHTC
T ss_pred             HHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHHHHHhCc
Confidence               111  000  34567889999999999995 99999999874

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.95  E-value=1.2e-26  Score=206.09  Aligned_cols=254  Identities=14%  Similarity=0.128  Sum_probs=179.8

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++++++.+|+++++.+. ++.++|+|||+|+..... .++. .+...|+.++.+++++|++ + +++|||+||.++  +.
T Consensus       211 ~~v~~v~~Dl~d~~~l~-~~~~~D~Vih~Aa~~~~~-~~~~-~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~v--G~  283 (508)
T 4f6l_B          211 SNIEVIVGDFECMDDVV-LPENMDTIIHAGARTDHF-GDDD-EFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV--GT  283 (508)
T ss_dssp             TTEEEEEEBTTBCSSCC-CSSCCSEEEECCCC----------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCT--TS
T ss_pred             CceEEEecCCcccccCC-CccCCCEEEECCceecCC-CCHH-HHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhh--cc
Confidence            58999999999988888 778999999999987532 2344 8899999999999999998 5 799999999984  32


Q ss_pred             ccC--CCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC-----ccH
Q 035985           95 AQN--VTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP-----SSV  167 (293)
Q Consensus        95 ~~~--~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~-----~~~  167 (293)
                      ...  ....+++|+++..      ...|.+.|+.+|+.+|++++.+.+ .|++++++||++|||+.....+.     ..+
T Consensus       284 ~~~~~~~~~~~~E~~~~~------~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~  356 (508)
T 4f6l_B          284 YFDIDTEDVTFSEADVYK------GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRF  356 (508)
T ss_dssp             EECTTCSCCEECTTCSCS------SBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHH
T ss_pred             CCccCCcCcccccccccc------cccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHH
Confidence            111  1125788887421      234778999999999999999765 59999999999999998765321     124


Q ss_pred             HHHHHHH-hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCC
Q 035985          168 ALAATLI-TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVP  245 (293)
Q Consensus       168 ~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~  245 (293)
                      ..++... .++....  ..|    +..++|+|++|+|++++.++..+..+++|++ +++.+++.|+++.+++.. -..++
T Consensus       357 ~~~i~~~~~~~~~~~--~~g----~~~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~-~~~~~  429 (508)
T 4f6l_B          357 SMVMNDLLQLDCIGV--SMA----EMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE-IELVS  429 (508)
T ss_dssp             HHHHHHHTTCSEEET--TGG----GSEEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC-CEEEC
T ss_pred             HHHHHHHHHcCCCCC--Ccc----CceEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC-CcccC
Confidence            4444444 3333322  111    3479999999999999999988776779977 668899999999999754 11111


Q ss_pred             CC-----CC--CCC----------cccccccchHHHH----hcCCccccCHHHHHHHHHHHHHHc
Q 035985          246 TD-----FG--DFP----------SEAKLILSSEKLI----SEGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       246 ~~-----~~--~~~----------~~~~~~~d~~k~~----~lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      ..     +.  ...          ......+|+++.+    ++||.+...-++.++++++|+++.
T Consensus       430 ~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~  494 (508)
T 4f6l_B          430 DESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI  494 (508)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCccchhcccccccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence            00     00  000          0123456665543    479988866688899999888763

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.94  E-value=3.5e-27  Score=193.27  Aligned_cols=222  Identities=17%  Similarity=0.131  Sum_probs=165.9

Q ss_pred             EecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccc
Q 035985           20 FRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINA   95 (293)
Q Consensus        20 v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~   95 (293)
                      +.+|++|++++.+++++  +|+|||+|+.....  ..++. ..++.|+.++.++++++++.+ + +||++||.++ |+..
T Consensus        39 ~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~-~~~~  114 (273)
T 2ggs_A           39 YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKE-KAYKINAEAVRHIVRAGKVID-S-YIVHISTDYV-FDGE  114 (273)
T ss_dssp             EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGG-SCSS
T ss_pred             ceeccCCHHHHHHHHHhcCCCEEEECCcccChhhhhhCHH-HHHHHhHHHHHHHHHHHHHhC-C-eEEEEeccee-EcCC
Confidence            77999999999999885  99999999975421  12344 789999999999999999987 6 9999999974 4332


Q ss_pred             cCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH-
Q 035985           96 QNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI-  174 (293)
Q Consensus        96 ~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-  174 (293)
                      .    .+++|++         +..|.+.|+.+|..+|.+++.      ++++++||+.+||+.      .....+.... 
T Consensus       115 ~----~~~~e~~---------~~~~~~~Y~~sK~~~e~~~~~------~~~~~iR~~~v~G~~------~~~~~~~~~~~  169 (273)
T 2ggs_A          115 K----GNYKEED---------IPNPINYYGLSKLLGETFALQ------DDSLIIRTSGIFRNK------GFPIYVYKTLK  169 (273)
T ss_dssp             S----CSBCTTS---------CCCCSSHHHHHHHHHHHHHCC------TTCEEEEECCCBSSS------SHHHHHHHHHH
T ss_pred             C----CCcCCCC---------CCCCCCHHHHHHHHHHHHHhC------CCeEEEecccccccc------HHHHHHHHHHH
Confidence            2    3678887         667788999999999998866      678999999999821      2333343333 


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCC---CCCCCCC
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKV---PTDFGDF  251 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~---~~~~~~~  251 (293)
                      .+....+.  +     + .++++|++|+|++++.+++++. +++|+++++.+|++|+++.+.+.+|....   +......
T Consensus       170 ~~~~~~~~--~-----~-~~~~~~~~dva~~i~~~~~~~~-~g~~~i~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~  240 (273)
T 2ggs_A          170 EGKTVFAF--K-----G-YYSPISARKLASAILELLELRK-TGIIHVAGERISRFELALKIKEKFNLPGEVKEVDEVRGW  240 (273)
T ss_dssp             TTCCEEEE--S-----C-EECCCBHHHHHHHHHHHHHHTC-CEEEECCCCCEEHHHHHHHHHHHTTCCSCEEEESSCTTC
T ss_pred             cCCCEEee--c-----C-CCCceEHHHHHHHHHHHHhcCc-CCeEEECCCcccHHHHHHHHHHHhCCChhhccccccccc
Confidence            34333222  2     2 5789999999999999998764 56888755889999999999999984311   1111111


Q ss_pred             -Cc-ccccccchHHHHh-cCCcc-ccCHHHHH
Q 035985          252 -PS-EAKLILSSEKLIS-EGFCF-KYGIEDIY  279 (293)
Q Consensus       252 -~~-~~~~~~d~~k~~~-lG~~~-~~~~~~~i  279 (293)
                       +. .....+|++|+++ |||+| .+++++++
T Consensus       241 ~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~  272 (273)
T 2ggs_A          241 IAKRPYDSSLDSSRARKILSTDFYTLDLDGMV  272 (273)
T ss_dssp             CSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred             ccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence             11 1557899999998 99999 56888764

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.94  E-value=6.7e-26  Score=188.00  Aligned_cols=228  Identities=11%  Similarity=0.056  Sum_probs=164.1

Q ss_pred             hhhhcCCCEEEEecccCCCCC-----CCccccchhHHHHHHHHHHHHHhcCC-CccEEEEecccchhcccccCCCCcccc
Q 035985           31 DAPISRSDIVFHVATPVNFSS-----DDPETDMIKPAIQGVVNVLKACTKTK-TVKRVILTSSAAAVSINAQNVTGLVMD  104 (293)
Q Consensus        31 ~~~~~~~d~Vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~  104 (293)
                      .+.++++|+|||+|+..-...     ......++..|+.++.+|++++++.+ +.++||++||.+ +|+....   .+++
T Consensus        46 ~~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~-vyg~~~~---~~~~  121 (298)
T 4b4o_A           46 ASGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVA-YYQPSLT---AEYD  121 (298)
T ss_dssp             HHCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGG-GSCCCSS---CCBC
T ss_pred             HhhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeee-eecCCCC---Cccc
Confidence            345678999999998532111     11112567889999999999998775 144688889887 6665543   5788


Q ss_pred             CCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCccccccc
Q 035985          105 EKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGL  184 (293)
Q Consensus       105 E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (293)
                      |++         +..|.+.|+..|...|...  .....+++++++|++.|||++.     ..+..+......+.....+.
T Consensus       122 E~~---------p~~~~~~~~~~~~~~e~~~--~~~~~~~~~~~~r~~~v~g~~~-----~~~~~~~~~~~~~~~~~~g~  185 (298)
T 4b4o_A          122 EDS---------PGGDFDFFSNLVTKWEAAA--RLPGDSTRQVVVRSGVVLGRGG-----GAMGHMLLPFRLGLGGPIGS  185 (298)
T ss_dssp             TTC---------CCSCSSHHHHHHHHHHHHH--CCSSSSSEEEEEEECEEECTTS-----HHHHHHHHHHHTTCCCCBTT
T ss_pred             ccC---------CccccchhHHHHHHHHHHH--HhhccCCceeeeeeeeEEcCCC-----CchhHHHHHHhcCCcceecc
Confidence            887         6677778888888877643  2334589999999999999974     23444444333333322222


Q ss_pred             ccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCCCCC---------cc
Q 035985          185 KGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFGDFP---------SE  254 (293)
Q Consensus       185 ~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~---------~~  254 (293)
                      +     +..++|||++|+|+++..+++++...++||+ +++++|++|+++.+++.+|+.. ....+...         ..
T Consensus       186 g-----~~~~~~ihv~Dva~a~~~~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~-~~pvP~~~~~~~~g~~~~~  259 (298)
T 4b4o_A          186 G-----HQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRRA-FIPLPSAVVQAVFGRQRAI  259 (298)
T ss_dssp             S-----CSBCCEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTCCC-CCCBCHHHHHHHHCHHHHH
T ss_pred             c-----CceeecCcHHHHHHHHHHHHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCcCC-cccCCHHHHHHHhcchhHH
Confidence            2     4469999999999999999999888889987 6789999999999999998532 11111110         00


Q ss_pred             ---cccccchHHHHhcCCcccc-CHHHHHHHHHH
Q 035985          255 ---AKLILSSEKLISEGFCFKY-GIEDIYDQTVE  284 (293)
Q Consensus       255 ---~~~~~d~~k~~~lG~~~~~-~~~~~i~~~i~  284 (293)
                         .+.+++++|++++||++++ ++++++++.++
T Consensus       260 ~~l~~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~  293 (298)
T 4b4o_A          260 MLLEGQKVIPRRTLATGYQYSFPELGAALKEIAE  293 (298)
T ss_dssp             HHHCCCCBCCHHHHHTTCCCSCCSHHHHHHHHHH
T ss_pred             HhhCCCEEcHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence               3456788999999999998 79999999887

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.93  E-value=1.3e-25  Score=189.71  Aligned_cols=186  Identities=19%  Similarity=0.227  Sum_probs=149.3

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++.+|++|++.+.++++++|+|||+|+.....  ..++. +.++.|+.++.+++++|.+.+ +++||++||..++ 
T Consensus        70 ~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~-~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~-  146 (344)
T 2gn4_A           70 PRMRFFIGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPL-ECIKTNIMGASNVINACLKNA-ISQVIALSTDKAA-  146 (344)
T ss_dssp             TTEEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHSHH-HHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGS-
T ss_pred             CCEEEEECCCCCHHHHHHHHhcCCEEEECCCCCCCCchhcCHH-HHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccC-
Confidence            579999999999999999999999999999976411  12344 789999999999999999998 9999999997521 


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCCCCCCCCccHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPSLTPDIPSSVAL  169 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~  169 (293)
                                                .|.+.|+.+|..+|.+++.++.+   .+++++++||++|||+..     ..++.
T Consensus       147 --------------------------~p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~-----~~i~~  195 (344)
T 2gn4_A          147 --------------------------NPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG-----SVVPF  195 (344)
T ss_dssp             --------------------------SCCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT-----SHHHH
T ss_pred             --------------------------CCccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC-----CHHHH
Confidence                                      23468999999999999988764   479999999999999864     34555


Q ss_pred             HHHHH-hCC-cccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCC
Q 035985          170 AATLI-TGN-DFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFP  240 (293)
Q Consensus       170 ~~~~~-~~~-~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~  240 (293)
                      +...+ .+. +..+.  ++    +..++|+|++|+|++++.++++...+.+|++++..+|+.|+++.+.+.++
T Consensus       196 ~~~~~~~g~~~~~i~--~~----~~~r~~i~v~D~a~~v~~~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          196 FKKLVQNKASEIPIT--DI----RMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKALAPNTP  262 (344)
T ss_dssp             HHHHHHHTCCCEEES--CT----TCEEEEECHHHHHHHHHHHHHHCCSSCEEEECCCEEEHHHHHHHHCTTCC
T ss_pred             HHHHHHcCCCceEEe--CC----CeEEeeEEHHHHHHHHHHHHhhccCCCEEecCCCcEEHHHHHHHHHHhCC
Confidence            55544 344 33333  21    33588999999999999999876555688887778999999999987654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.93  E-value=6.2e-25  Score=175.00  Aligned_cols=179  Identities=18%  Similarity=0.176  Sum_probs=138.0

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++++++++|++|++++.++++++|+|||+|+...    ... ..++.|+.++.++++++++.+ +++||++||.+++++.
T Consensus        46 ~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~----~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~  119 (227)
T 3dhn_A           46 EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGW----NNP-DIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIA  119 (227)
T ss_dssp             TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEE
T ss_pred             CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCC----CCh-hHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCC
Confidence            5799999999999999999999999999998642    122 578899999999999999998 9999999999866554


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      +.     ...|+.         +..|.+.|+.+|..+|.+++.++++.+++++++||+++||++.......         
T Consensus       120 ~~-----~~~~~~---------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~---------  176 (227)
T 3dhn_A          120 PG-----LRLMDS---------GEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR---------  176 (227)
T ss_dssp             TT-----EEGGGT---------TCSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE---------
T ss_pred             CC-----CccccC---------CcchHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCcccccee---------
Confidence            32     223343         5567889999999999999998877899999999999999986543111         


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCC-CcEEE-eccCCCHH
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESAS-GRYIC-CAVNTSVP  229 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~-~~y~~-~~~~~t~~  229 (293)
                      .+....+....       .++|+|++|+|++++.+++++... .+|++ ++++.++.
T Consensus       177 ~~~~~~~~~~~-------~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          177 LGKDDMIVDIV-------GNSHISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHH  226 (227)
T ss_dssp             EESSBCCCCTT-------SCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC--
T ss_pred             ecCCCcccCCC-------CCcEEeHHHHHHHHHHHHhCccccCcEEEEEeehhcccC
Confidence            12222222222       389999999999999999988754 48865 66777764

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.92  E-value=1e-24  Score=179.80  Aligned_cols=213  Identities=16%  Similarity=0.151  Sum_probs=158.0

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++.+|++|++++.++++++|+|||+|+..      +. .  ..|+.++.+++++|++.+ +++|||+||.++ +..
T Consensus        45 ~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~------~~-~--~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~-~~~  113 (287)
T 2jl1_A           45 QGVEVRHGDYNQPESLQKAFAGVSKLLFISGPH------YD-N--TLLIVQHANVVKAARDAG-VKHIAYTGYAFA-EES  113 (287)
T ss_dssp             TTCEEEECCTTCHHHHHHHTTTCSEEEECCCCC------SC-H--HHHHHHHHHHHHHHHHTT-CSEEEEEEETTG-GGC
T ss_pred             cCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCC------cC-c--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCC-CCC
Confidence            378999999999999999999999999999852      11 1  569999999999999998 999999999863 210


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                                                ...|+.+|..+|++++.    .+++++++||+.++|+...    ..+.   ..+
T Consensus       114 --------------------------~~~y~~~K~~~E~~~~~----~~~~~~ilrp~~~~~~~~~----~~~~---~~~  156 (287)
T 2jl1_A          114 --------------------------IIPLAHVHLATEYAIRT----TNIPYTFLRNALYTDFFVN----EGLR---AST  156 (287)
T ss_dssp             --------------------------CSTHHHHHHHHHHHHHH----TTCCEEEEEECCBHHHHSS----GGGH---HHH
T ss_pred             --------------------------CCchHHHHHHHHHHHHH----cCCCeEEEECCEeccccch----hhHH---HHh
Confidence                                      12799999999998853    5899999999988876421    1222   222


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCC-CC--
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTD-FG--  249 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~-~~--  249 (293)
                      ..+...+ ..+     +..++|+|++|+|++++.+++++.. +.+|++ +++.+|++|+++.+.+.+|.. ++.. .+  
T Consensus       157 ~~~~~~~-~~~-----~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~  229 (287)
T 2jl1_A          157 ESGAIVT-NAG-----SGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKK-VVHQPVSFE  229 (287)
T ss_dssp             HHTEEEE-SCT-----TCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSC-CEEEECCHH
T ss_pred             hCCceec-cCC-----CCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCc-ceEEeCCHH
Confidence            2233222 111     4478999999999999999987644 458877 556899999999999998842 2211 11  


Q ss_pred             ---------CCCcc--------------cccccchHHHHh-cCCccccCHHHHHHHHHH
Q 035985          250 ---------DFPSE--------------AKLILSSEKLIS-EGFCFKYGIEDIYDQTVE  284 (293)
Q Consensus       250 ---------~~~~~--------------~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~  284 (293)
                               ..+..              .....|++|+++ ||  |.++++++++++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~  286 (287)
T 2jl1_A          230 EEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG--SLTPLKETVKQALK  286 (287)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence                     11110              124567889998 99  66699999999875

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.92  E-value=2.7e-25  Score=189.78  Aligned_cols=187  Identities=18%  Similarity=0.204  Sum_probs=155.9

Q ss_pred             eEEEecCC-CCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCcc-EEEEecccchhccc
Q 035985           17 LKIFRADL-TDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVK-RVILTSSAAAVSIN   94 (293)
Q Consensus        17 v~~v~~Dl-~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~~~~~~~   94 (293)
                      ++++.+|+ .|++++.++++++|+|||+|+....  .++. ..++.|+.++.+++++|++.+ ++ +|||+||.+ +++ 
T Consensus        26 ~~v~~~d~~~d~~~l~~~~~~~d~Vih~a~~~~~--~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~-~~~-   99 (369)
T 3st7_A           26 HHIFEVHRQTKEEELESALLKADFIVHLAGVNRP--EHDK-EFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQ-ATQ-   99 (369)
T ss_dssp             CEEEECCTTCCHHHHHHHHHHCSEEEECCCSBCT--TCST-TCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGG-GGS-
T ss_pred             CEEEEECCCCCHHHHHHHhccCCEEEECCcCCCC--CCHH-HHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchh-hcC-
Confidence            48999999 9999999999999999999997653  2445 788999999999999999998 76 999999987 432 


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                                                .+.|+.+|..+|++++.++++.+++++++||+++||++..+.....+..++..+
T Consensus       100 --------------------------~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~  153 (369)
T 3st7_A          100 --------------------------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKI  153 (369)
T ss_dssp             --------------------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHH
T ss_pred             --------------------------CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHH
Confidence                                      248999999999999999988899999999999999988776555666666555


Q ss_pred             h-CCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC--CCcEEE-eccCCCHHHHHHHHHHhCCC
Q 035985          175 T-GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA--SGRYIC-CAVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       175 ~-~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~--~~~y~~-~~~~~t~~e~~~~i~~~~~~  241 (293)
                      . +....+.  +    ++..++++|++|+|++++.++..+..  +++|++ +++.+|+.|+++.+++.+|.
T Consensus       154 ~~~~~~~~~--~----~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~  218 (369)
T 3st7_A          154 ARNEEIQVN--D----RNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQS  218 (369)
T ss_dssp             HTTCCCCCS--C----TTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHH
T ss_pred             HcCCCeEec--C----CCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCC
Confidence            4 4443332  2    14468999999999999999998876  678866 56899999999999998874

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.92  E-value=9.7e-25  Score=192.12  Aligned_cols=216  Identities=14%  Similarity=0.107  Sum_probs=153.3

Q ss_pred             CCeEEEecCCC------CCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEeccc
Q 035985           15 GELKIFRADLT------DEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSA   88 (293)
Q Consensus        15 ~~v~~v~~Dl~------d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~   88 (293)
                      .+++++.+|++      |.+.+.++++++|+|||+|+..+.  ..+. ..++.|+.++.+++++|++.+ +++|||+||.
T Consensus       140 ~~v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~-~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~  215 (478)
T 4dqv_A          140 DRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYH-ELFGPNVAGTAELIRIALTTK-LKPFTYVSTA  215 (478)
T ss_dssp             TTEEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCC-EEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEG
T ss_pred             CceEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCC--cCHH-HHHHHHHHHHHHHHHHHHhCC-CCeEEEEeeh
Confidence            58999999998      445788888999999999998765  3444 889999999999999999988 8999999998


Q ss_pred             chhcccccCCCCccccCCCCCchhhh--ccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCC---CC
Q 035985           89 AAVSINAQNVTGLVMDEKNWTDVEFL--SSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTP---DI  163 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~E~~~~~~~~~--~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~---~~  163 (293)
                      + +|+....   .+++|+.+.....+  .......+.|+.+|+.+|.+++.++++.+++++++||++|||++...   ..
T Consensus       216 ~-v~~~~~~---~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~  291 (478)
T 4dqv_A          216 D-VGAAIEP---SAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNM  291 (478)
T ss_dssp             G-GGTTSCT---TTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCT
T ss_pred             h-hcCccCC---CCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCH
Confidence            7 5554322   46777763211100  00011225699999999999999988779999999999999986522   12


Q ss_pred             CccHHHHHHH-HhCCcc-c-cccccccc-ccCCCCcceeHHhHHHHHHHhhcc----C-CCCCcEEE-eccC--CCHHHH
Q 035985          164 PSSVALAATL-ITGNDF-L-LNGLKGMQ-MLSGSISISHVEDVCRAHIFLAEK----E-SASGRYIC-CAVN--TSVPEL  231 (293)
Q Consensus       164 ~~~~~~~~~~-~~~~~~-~-~~~~~g~~-~~~~~~~~v~v~D~a~~~~~~~~~----~-~~~~~y~~-~~~~--~t~~e~  231 (293)
                      ..++..++.. ...+.. . +...++.. ..+..++++|++|+|++++.++..    + ..+++|++ +++.  +|++|+
T Consensus       292 ~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el  371 (478)
T 4dqv_A          292 SDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEY  371 (478)
T ss_dssp             TBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHH
T ss_pred             HHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHH
Confidence            2334333322 222221 1 11111000 013468999999999999998875    3 23458977 5566  999999


Q ss_pred             HHHHHHh
Q 035985          232 AKFLNKR  238 (293)
Q Consensus       232 ~~~i~~~  238 (293)
                      ++.+.+.
T Consensus       372 ~~~l~~~  378 (478)
T 4dqv_A          372 VDWLIEA  378 (478)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHc
Confidence            9999996

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.92  E-value=2.2e-24  Score=176.09  Aligned_cols=196  Identities=15%  Similarity=0.116  Sum_probs=153.3

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++.+|++|++.+.++++++|+|||+|+...  ..... ..++.|+.++.++++++++.+ +++|||+||.. +|+.
T Consensus        42 ~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~--~~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~-~~~~  116 (267)
T 3ay3_A           42 AHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSV--ERPWN-DILQANIIGAYNLYEAARNLG-KPRIVFASSNH-TIGY  116 (267)
T ss_dssp             TTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCS--CCCHH-HHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGG-GSTT
T ss_pred             CCccEEEccCCCHHHHHHHHcCCCEEEECCcCCC--CCCHH-HHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHH-HhCC
Confidence            3678999999999999999999999999999753  22334 788999999999999999988 89999999997 4443


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      ....  .+++|++         +..|.+.|+.+|..+|.+++.+.++.+++++++||+++|+...               
T Consensus       117 ~~~~--~~~~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~---------------  170 (267)
T 3ay3_A          117 YPRT--TRIDTEV---------PRRPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK---------------  170 (267)
T ss_dssp             SBTT--SCBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC---------------
T ss_pred             CCCC--CCCCCCC---------CCCCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC---------------
Confidence            2222  5688887         6678889999999999999998887899999999999984210               


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCC-CcEEEeccCCCHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESAS-GRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPS  253 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~-~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~  253 (293)
                             .  .     +..++|+|++|+|++++.+++.+..+ ++|++.+..                            
T Consensus       171 -------~--~-----~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~----------------------------  208 (267)
T 3ay3_A          171 -------D--A-----RMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASAN----------------------------  208 (267)
T ss_dssp             -------S--H-----HHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSC----------------------------
T ss_pred             -------C--C-----CeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCc----------------------------
Confidence                   0  0     11367999999999999999877543 456543210                            


Q ss_pred             ccccccchHHHHhcCCccccCHHHHHHHHHH
Q 035985          254 EAKLILSSEKLISEGFCFKYGIEDIYDQTVE  284 (293)
Q Consensus       254 ~~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~  284 (293)
                       .....|..+++.|||+|+++++++++++++
T Consensus       209 -~~~~~d~~~~~~lg~~p~~~~~~~~~~~~~  238 (267)
T 3ay3_A          209 -TESWWDNDKSAFLGWVPQDSSEIWREEIEQ  238 (267)
T ss_dssp             -SSCCBCCGGGGGGCCCCCCCGGGGHHHHHH
T ss_pred             -cccccCHHHHHHcCCCCCCCHHHHHHHHHh
Confidence             112356666744999999999999988765

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.91  E-value=1e-24  Score=179.71  Aligned_cols=214  Identities=17%  Similarity=0.159  Sum_probs=152.0

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++.+|++|++++.++++++|+|||+|+...           ..|+.++.+++++|++.+ +++||++||.++ +. 
T Consensus        44 ~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~-----------~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~-~~-  109 (286)
T 2zcu_A           44 QGITVRQADYGDEAALTSALQGVEKLLLISSSEV-----------GQRAPQHRNVINAAKAAG-VKFIAYTSLLHA-DT-  109 (286)
T ss_dssp             TTCEEEECCTTCHHHHHHHTTTCSEEEECC-------------------CHHHHHHHHHHHHT-CCEEEEEEETTT-TT-
T ss_pred             CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc-----------hHHHHHHHHHHHHHHHcC-CCEEEEECCCCC-CC-
Confidence            3689999999999999999999999999998521           147788999999999988 999999999863 21 


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                                               ....|+.+|..+|++++.    .+++++++||+.++++..     ..   +....
T Consensus       110 -------------------------~~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~~~~~~~-----~~---~~~~~  152 (286)
T 2zcu_A          110 -------------------------SPLGLADEHIETEKMLAD----SGIVYTLLRNGWYSENYL-----AS---APAAL  152 (286)
T ss_dssp             -------------------------CCSTTHHHHHHHHHHHHH----HCSEEEEEEECCBHHHHH-----TT---HHHHH
T ss_pred             -------------------------CcchhHHHHHHHHHHHHH----cCCCeEEEeChHHhhhhH-----HH---hHHhh
Confidence                                     013799999999998864    489999999987665421     11   22223


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC-CCCcEEEe-ccCCCHHHHHHHHHHhCCCCCCCCC-CC--
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES-ASGRYICC-AVNTSVPELAKFLNKRFPEYKVPTD-FG--  249 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~-~~~~y~~~-~~~~t~~e~~~~i~~~~~~~~~~~~-~~--  249 (293)
                      .++...+. .+     +..++++|++|+|++++.++.++. .+++|+++ ++.+|++|+++.+.+.+|.. ++.. .+  
T Consensus       153 ~~~~~~~~-~~-----~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~  225 (286)
T 2zcu_A          153 EHGVFIGA-AG-----DGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQ-VTYQNLSEA  225 (286)
T ss_dssp             HHTEEEES-CT-----TCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSC-CEEEECCHH
T ss_pred             cCCceecc-CC-----CCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCC-CceeeCCHH
Confidence            33333221 11     447899999999999999998764 45588774 56899999999999998842 2111 11  


Q ss_pred             ---------CCCcc--------------cccccchHHHHh-cCCccccCHHHHHHHHHHHHH
Q 035985          250 ---------DFPSE--------------AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLK  287 (293)
Q Consensus       250 ---------~~~~~--------------~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~  287 (293)
                               ..+..              .....|++|+++ |||.+ .+++++++++++|+.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~-~~~~e~l~~~~~~~~  286 (286)
T 2zcu_A          226 DFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPT-TTLAESVSHLFNVNN  286 (286)
T ss_dssp             HHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCC-CCHHHHHHGGGC---
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCC-CCHHHHHHHHHhhcC
Confidence                     11110              124567889988 99855 499999999999873

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.89  E-value=5.3e-23  Score=162.88  Aligned_cols=168  Identities=17%  Similarity=0.174  Sum_probs=134.8

Q ss_pred             CCeEEEecCCCC-CcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcc
Q 035985           15 GELKIFRADLTD-EASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSI   93 (293)
Q Consensus        15 ~~v~~v~~Dl~d-~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~   93 (293)
                      ++++++++|++| ++++.++++++|+|||+|+...      . ..++.|+.++.++++++++.+ +++||++||.+++..
T Consensus        41 ~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~------~-~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~  112 (219)
T 3dqp_A           41 NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG------K-SLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQP  112 (219)
T ss_dssp             TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT------S-SCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCG
T ss_pred             CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC------C-CcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCC
Confidence            579999999999 9999999999999999999754      2 568889999999999999998 899999999763321


Q ss_pred             cccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           94 NAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        94 ~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                             .+..| .         +..|.+.|+.+|..+|.+++   +..+++++++||+.+||+......          
T Consensus       113 -------~~~~e-~---------~~~~~~~Y~~sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~~----------  162 (219)
T 3dqp_A          113 -------EKWIG-A---------GFDALKDYYIAKHFADLYLT---KETNLDYTIIQPGALTEEEATGLI----------  162 (219)
T ss_dssp             -------GGCCS-H---------HHHHTHHHHHHHHHHHHHHH---HSCCCEEEEEEECSEECSCCCSEE----------
T ss_pred             -------Ccccc-c---------ccccccHHHHHHHHHHHHHH---hccCCcEEEEeCceEecCCCCCcc----------
Confidence                   23334 2         33467899999999999986   456999999999999998643210          


Q ss_pred             HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEEeccCCCHHHHHHH
Q 035985          174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYICCAVNTSVPELAKF  234 (293)
Q Consensus       174 ~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~~~~~~t~~e~~~~  234 (293)
                            .+   +     +..+++++++|+|++++.++.++.. +.+|++++...+++|+...
T Consensus       163 ------~~---~-----~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~~~~~e~~~~  210 (219)
T 3dqp_A          163 ------DI---N-----DEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKTAIKEALES  210 (219)
T ss_dssp             ------EE---S-----SSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECSEEHHHHHHT
T ss_pred             ------cc---C-----CCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCCccHHHHHHH
Confidence                  01   1     2368999999999999999998765 4588886667999998764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.88  E-value=2.9e-23  Score=175.70  Aligned_cols=225  Identities=12%  Similarity=0.128  Sum_probs=155.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      .+++++.+|++|++++.++++  ++|+|||+|+..              |+.++.+++++|++.+.+++||+ |+.+   
T Consensus        60 ~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~--------------n~~~~~~l~~aa~~~g~v~~~v~-S~~g---  121 (346)
T 3i6i_A           60 KGAIIVYGLINEQEAMEKILKEHEIDIVVSTVGGE--------------SILDQIALVKAMKAVGTIKRFLP-SEFG---  121 (346)
T ss_dssp             TTCEEEECCTTCHHHHHHHHHHTTCCEEEECCCGG--------------GGGGHHHHHHHHHHHCCCSEEEC-SCCS---
T ss_pred             CCcEEEEeecCCHHHHHHHHhhCCCCEEEECCchh--------------hHHHHHHHHHHHHHcCCceEEee-cccC---
Confidence            589999999999999999999  999999999852              67788999999999876889986 4322   


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAAT  172 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~  172 (293)
                              ...+|..         +..|.+.|+.+|..+|++++.    .+++++++||+.++|......    ......
T Consensus       122 --------~~~~e~~---------~~~p~~~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~----~~~~~~  176 (346)
T 3i6i_A          122 --------HDVNRAD---------PVEPGLNMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYYNN----IHPSEV  176 (346)
T ss_dssp             --------SCTTTCC---------CCTTHHHHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC---------C
T ss_pred             --------CCCCccC---------cCCCcchHHHHHHHHHHHHHH----cCCCEEEEEecccccccCccc----cccccc
Confidence                    1234444         456778999999999998865    589999999999999754321    111111


Q ss_pred             HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEEe--ccCCCHHHHHHHHHHhCCCCCCCCCCC
Q 035985          173 LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYICC--AVNTSVPELAKFLNKRFPEYKVPTDFG  249 (293)
Q Consensus       173 ~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~~--~~~~t~~e~~~~i~~~~~~~~~~~~~~  249 (293)
                      ...++...+.+.+     +..++|+|++|+|++++.++..+.. ++.|++.  ++.+|+.|+++.+.+.+|. +++....
T Consensus       177 ~~~~~~~~~~g~g-----~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~-~~~~~~~  250 (346)
T 3i6i_A          177 LPPTDFFQIYGDG-----NVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGR-TLPRVTV  250 (346)
T ss_dssp             CCCSSCEEEETTS-----CCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTS-CCCEEEE
T ss_pred             cCCCceEEEccCC-----CceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCC-CCceEec
Confidence            1123333333322     4579999999999999999998754 4566553  6899999999999999884 2222110


Q ss_pred             ------------CCCcc------cc-------cccch-----HHHHh--cCCccccCHHHHHHHHHHHHHHc
Q 035985          250 ------------DFPSE------AK-------LILSS-----EKLIS--EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       250 ------------~~~~~------~~-------~~~d~-----~k~~~--lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                                  +.+..      ..       ..++.     .++.+  -+++++ +++|.++++++|++++
T Consensus       251 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~t-~~~e~l~~~~~~~~~~  321 (346)
T 3i6i_A          251 TEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSFR-TVEECFGEYIVKMEEK  321 (346)
T ss_dssp             CHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCCC-CHHHHHHHHHCC----
T ss_pred             CHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCCcccHHHhCCCCCcC-cHHHHHHHHHHHhhcc
Confidence                        00100      00       00111     12343  266665 9999999999998865

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.88  E-value=5.3e-22  Score=161.82  Aligned_cols=172  Identities=13%  Similarity=0.061  Sum_probs=139.5

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++.+|++|++++.++++++|+|||+||....  .... .+++.|+.++.++++++++.+ +++||++||..++...
T Consensus        43 ~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~--~~~~-~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~  118 (267)
T 3rft_A           43 PNEECVQCDLADANAVNAMVAGCDGIVHLGGISVE--KPFE-QILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYY  118 (267)
T ss_dssp             TTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSC--CCHH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTS
T ss_pred             CCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCc--CCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCC
Confidence            47899999999999999999999999999998432  2344 889999999999999999988 8999999999854322


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      . ..  .+++|+.         +..|.+.|+.+|..+|.+++.++.+++++++++||+.|||+....             
T Consensus       119 ~-~~--~~~~e~~---------~~~~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~-------------  173 (267)
T 3rft_A          119 P-QT--ERLGPDV---------PARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNNY-------------  173 (267)
T ss_dssp             B-TT--SCBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCST-------------
T ss_pred             C-CC--CCCCCCC---------CCCCCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCCC-------------
Confidence            2 22  5678887         677889999999999999999998889999999999999873211             


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cE-EEeccCCCHHHH
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RY-ICCAVNTSVPEL  231 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y-~~~~~~~t~~e~  231 (293)
                                      +..++|++++|+++++..+++.+..++ ++ ++++++.++.++
T Consensus       174 ----------------~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~  216 (267)
T 3rft_A          174 ----------------RMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASANDAGWWDN  216 (267)
T ss_dssp             ----------------THHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCTTCCBCC
T ss_pred             ----------------CceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCcccC
Confidence                            113678999999999999998876654 45 456666655554

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.87  E-value=9.4e-22  Score=157.49  Aligned_cols=169  Identities=18%  Similarity=0.226  Sum_probs=131.7

Q ss_pred             Ce-EEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           16 EL-KIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        16 ~v-~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++ +++++|++  +.+.+++.++|+|||+|+....  .++. ..++.|+.++.++++++++.+ +++||++||.+...  
T Consensus        65 ~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~~--~~~~-~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~--  136 (236)
T 3e8x_A           65 GASDIVVANLE--EDFSHAFASIDAVVFAAGSGPH--TGAD-KTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVD--  136 (236)
T ss_dssp             TCSEEEECCTT--SCCGGGGTTCSEEEECCCCCTT--SCHH-HHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSC--
T ss_pred             CCceEEEcccH--HHHHHHHcCCCEEEECCCCCCC--CCcc-ccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCC--
Confidence            78 99999999  8899999999999999997643  2445 889999999999999999988 89999999964211  


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                               .+..         + .+.+.|+.+|..+|.+++    ..+++++++||+.++|+.....            
T Consensus       137 ---------~~~~---------~-~~~~~Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~------------  181 (236)
T 3e8x_A          137 ---------PDQG---------P-MNMRHYLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGK------------  181 (236)
T ss_dssp             ---------GGGS---------C-GGGHHHHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSE------------
T ss_pred             ---------CCCC---------h-hhhhhHHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCe------------
Confidence                     1111         1 345689999999999875    5699999999999999864321            


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEEeccCCCHHHHHHHHH
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYICCAVNTSVPELAKFLN  236 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~~~~~~t~~e~~~~i~  236 (293)
                          .......     ++.+++++++|+|++++.+++++.. +.+|++++..++++|+++.++
T Consensus       182 ----~~~~~~~-----~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~~~~~~e~~~~i~  235 (236)
T 3e8x_A          182 ----VTVSPHF-----SEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNGDTPIAKVVEQLG  235 (236)
T ss_dssp             ----EEEESSC-----SCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred             ----EEeccCC-----CcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCCCcCHHHHHHHhc
Confidence                0111111     3358999999999999999998754 458877555799999998765

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.86  E-value=7.7e-21  Score=156.80  Aligned_cols=212  Identities=17%  Similarity=0.226  Sum_probs=146.1

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++.+|++|++++.++++++|+|||+|+...         ....|+.++.+++++|++.+ +++|||+||.+.    
T Consensus        44 ~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~---------~~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~----  109 (289)
T 3e48_A           44 GKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIH---------PSFKRIPEVENLVYAAKQSG-VAHIIFIGYYAD----  109 (289)
T ss_dssp             TTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCC---------SHHHHHHHHHHHHHHHHHTT-CCEEEEEEESCC----
T ss_pred             CCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc---------cchhhHHHHHHHHHHHHHcC-CCEEEEEcccCC----
Confidence            5899999999999999999999999999998532         13458999999999999999 999999999541    


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      .         +..            |. .+...+..+|..+    ++.+++++++||+.++|+.        ...+....
T Consensus       110 ~---------~~~------------~~-~~~~~~~~~e~~~----~~~g~~~~ilrp~~~~~~~--------~~~~~~~~  155 (289)
T 3e48_A          110 Q---------HNN------------PF-HMSPYFGYASRLL----STSGIDYTYVRMAMYMDPL--------KPYLPELM  155 (289)
T ss_dssp             S---------TTC------------CS-TTHHHHHHHHHHH----HHHCCEEEEEEECEESTTH--------HHHHHHHH
T ss_pred             C---------CCC------------CC-ccchhHHHHHHHH----HHcCCCEEEEecccccccc--------HHHHHHHH
Confidence            0         010            10 1222223444443    3458999999999999863        12223333


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEEeccCCCHHHHHHHHHHhCCCCCCCCC------
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYICCAVNTSVPELAKFLNKRFPEYKVPTD------  247 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~~------  247 (293)
                      .+....+.. +     +..++|+|++|+|++++.++.++.. +.+|+++++.+|+.|+++.+.+.+|+. ++..      
T Consensus       156 ~~~~~~~~~-g-----~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~s~~e~~~~~~~~~g~~-~~~~~~~~~~  228 (289)
T 3e48_A          156 NMHKLIYPA-G-----DGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSYDMKELAAILSEASGTE-IKYEPVSLET  228 (289)
T ss_dssp             HHTEECCCC-T-----TCEEEEECHHHHHHHHHHHHHCGGGTTCEEEECCEEEEHHHHHHHHHHHHTSC-CEECCCCHHH
T ss_pred             HCCCEecCC-C-----CceeeeEEHHHHHHHHHHHHcCCCcCCceEEeCCCcCCHHHHHHHHHHHHCCc-eeEEeCCHHH
Confidence            333332221 2     4468999999999999999988765 558876688999999999999998852 2111      


Q ss_pred             ----CCCCCcc--------------cccccchHHHHh-cCCccccCHHHHHHHHH
Q 035985          248 ----FGDFPSE--------------AKLILSSEKLIS-EGFCFKYGIEDIYDQTV  283 (293)
Q Consensus       248 ----~~~~~~~--------------~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i  283 (293)
                          +.. +..              .....+.+.+.+ +|++|+ ++++.+++..
T Consensus       229 ~~~~~~~-p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~-~~~~~~~~~~  281 (289)
T 3e48_A          229 FAEMYDE-PKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQ-TLQSFLQENI  281 (289)
T ss_dssp             HHHHTCC-STTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCC-CHHHHHHC--
T ss_pred             HHHHhcC-CccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCC-CHHHHHHHHH
Confidence                111 011              112234455666 899998 8888776544

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.84  E-value=2e-20  Score=148.14  Aligned_cols=174  Identities=14%  Similarity=0.202  Sum_probs=110.8

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++++++.+|++|++.  +++.++|+|||+|+...        .....|+.++.++++++++.+ +++||++||..++++.
T Consensus        42 ~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~--------~~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~  110 (221)
T 3ew7_A           42 KDINILQKDIFDLTL--SDLSDQNVVVDAYGISP--------DEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQID  110 (221)
T ss_dssp             SSSEEEECCGGGCCH--HHHTTCSEEEECCCSST--------TTTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-----
T ss_pred             CCCeEEeccccChhh--hhhcCCCEEEECCcCCc--------cccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcC
Confidence            479999999999988  78899999999998732        235569999999999999998 8999999998877765


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH-hCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ-ENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~-~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                      +..   .+..|+.         +..|.+.|+.+|...|.+ ..+.+ ..+++++++||+.+||++....   .+    . 
T Consensus       111 ~~~---~~~~~~~---------~~~~~~~y~~~k~~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~---~~----~-  169 (221)
T 3ew7_A          111 EDG---NTLLESK---------GLREAPYYPTARAQAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTG---DY----Q-  169 (221)
T ss_dssp             --------------------------CCCSCCHHHHHHHH-HHHHTTTTTSCEEEEECSSCCCCC---------------
T ss_pred             CCC---ccccccC---------CCCCHHHHHHHHHHHHHH-HHHHhhccCccEEEEeCcceecCCCccC---ce----E-
Confidence            432   2344554         555677899999999986 33343 5699999999999999843211   00    0 


Q ss_pred             HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEEec-cCCCH
Q 035985          174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYICCA-VNTSV  228 (293)
Q Consensus       174 ~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~~~-~~~t~  228 (293)
                      ..+....+.. .       ..++++++|+|++++.+++++.. +.+|++++ ...+.
T Consensus       170 ~~~~~~~~~~-~-------~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~  218 (221)
T 3ew7_A          170 IGKDHLLFGS-D-------GNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHH  218 (221)
T ss_dssp             ----------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC------
T ss_pred             eccccceecC-C-------CCceEeHHHHHHHHHHHHhCccccCCEEEECCCCcccc
Confidence            1111121211 1       24699999999999999998875 45887754 44443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.83  E-value=1.7e-20  Score=151.53  Aligned_cols=186  Identities=16%  Similarity=0.128  Sum_probs=134.3

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCC--------CCCcc------ccchhHHHHHHHHHHHHHhcCCCcc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFS--------SDDPE------TDMIKPAIQGVVNVLKACTKTKTVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~--------~~~~~------~~~~~~n~~~~~~l~~~~~~~~~~~   80 (293)
                      .+++++.+|++|++++.++++++|+|||+|+.....        ..++.      ...++.|+.++.++++++++.+ ++
T Consensus        48 ~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~  126 (253)
T 1xq6_A           48 GEADVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VK  126 (253)
T ss_dssp             CCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CS
T ss_pred             CCeeEEEecCCCHHHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CC
Confidence            468899999999999999999999999999875321        01121      1357899999999999999988 89


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLT  160 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~  160 (293)
                      +||++||.+++. ..     .+...             ...+.|+.+|..+|.+++.    .+++++++||+.+||+...
T Consensus       127 ~iv~~SS~~~~~-~~-----~~~~~-------------~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~  183 (253)
T 1xq6_A          127 HIVVVGSMGGTN-PD-----HPLNK-------------LGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGG  183 (253)
T ss_dssp             EEEEEEETTTTC-TT-----CGGGG-------------GGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSS
T ss_pred             EEEEEcCccCCC-CC-----Ccccc-------------ccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcc
Confidence            999999986321 10     00000             0113588899999988753    5899999999999998643


Q ss_pred             CCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEEec----cCCCHHHHHHHH
Q 035985          161 PDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYICCA----VNTSVPELAKFL  235 (293)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~~~----~~~t~~e~~~~i  235 (293)
                      ..  ..       +.+....+.        .+..+++|++|+|++++.+++++.. +.+|++++    +.+|++|+++.+
T Consensus       184 ~~--~~-------~~~~~~~~~--------~~~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~  246 (253)
T 1xq6_A          184 VR--EL-------LVGKDDELL--------QTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALF  246 (253)
T ss_dssp             SS--CE-------EEESTTGGG--------GSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHH
T ss_pred             hh--hh-------hccCCcCCc--------CCCCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHH
Confidence            21  11       011111111        1136799999999999999987654 45787643    359999999999


Q ss_pred             HHhCCC
Q 035985          236 NKRFPE  241 (293)
Q Consensus       236 ~~~~~~  241 (293)
                      ++.+|+
T Consensus       247 ~~~~g~  252 (253)
T 1xq6_A          247 SQVTSR  252 (253)
T ss_dssp             HTCCCC
T ss_pred             HHHhCC
Confidence            998874

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.83  E-value=1e-19  Score=144.38  Aligned_cols=171  Identities=11%  Similarity=0.036  Sum_probs=125.3

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++++++++|++|++.  +++.++|+|||+|+...     .. .....|+.++.++++++++.+  ++||++||.++++..
T Consensus        43 ~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~-----~~-~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~  112 (224)
T 3h2s_A           43 ATVATLVKEPLVLTE--ADLDSVDAVVDALSVPW-----GS-GRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMP  112 (224)
T ss_dssp             TTSEEEECCGGGCCH--HHHTTCSEEEECCCCCT-----TS-SCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCT
T ss_pred             CCceEEecccccccH--hhcccCCEEEECCccCC-----Cc-chhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccC
Confidence            479999999999988  78899999999999752     11 346789999999999999988  799999998766654


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      .... ..+.+|..         .+.|.+.|+.+|..+|. +..+.++.+++++++||+.+||++....  ..        
T Consensus       113 ~~~~-~~~~~~~~---------~~~~~~~y~~sK~~~e~-~~~~~~~~~i~~~ivrp~~v~g~~~~~~--~~--------  171 (224)
T 3h2s_A          113 GADH-PMILDFPE---------SAASQPWYDGALYQYYE-YQFLQMNANVNWIGISPSEAFPSGPATS--YV--------  171 (224)
T ss_dssp             TCSS-CGGGGCCG---------GGGGSTTHHHHHHHHHH-HHHHTTCTTSCEEEEEECSBCCCCCCCC--EE--------
T ss_pred             CCCc-cccccCCC---------CCccchhhHHHHHHHHH-HHHHHhcCCCcEEEEcCccccCCCcccC--ce--------
Confidence            4321 02333333         33457889999999994 4555556699999999999999954321  00        


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEEec
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYICCA  223 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~~~  223 (293)
                      .+... +.. .     +...++++++|+|++++.+++++.. +.+|++++
T Consensus       172 ~~~~~-~~~-~-----~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~  214 (224)
T 3h2s_A          172 AGKDT-LLV-G-----EDGQSHITTGNMALAILDQLEHPTAIRDRIVVRD  214 (224)
T ss_dssp             EESSB-CCC-C-----TTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEE
T ss_pred             ecccc-ccc-C-----CCCCceEeHHHHHHHHHHHhcCccccCCEEEEec
Confidence            11111 111 1     2357899999999999999998765 45886654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.82  E-value=3.9e-20  Score=153.31  Aligned_cols=183  Identities=11%  Similarity=0.042  Sum_probs=135.6

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++.+|++|++++.++++++|+|||+++....       .....|+.++.+++++|++.+ +++||++||.. +++.
T Consensus        51 ~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~-~~~~  121 (299)
T 2wm3_A           51 QGAEVVQGDQDDQVIMELALNGAYATFIVTNYWES-------CSQEQEVKQGKLLADLARRLG-LHYVVYSGLEN-IKKL  121 (299)
T ss_dssp             TTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHHH-------TCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCC-HHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCcc-------ccchHHHHHHHHHHHHHHHcC-CCEEEEEcCcc-cccc
Confidence            47899999999999999999999999999974221       124568889999999999988 99999987765 4432


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      .         +.            .+...|+.+|..+|.+++.    .+++++++||+.+||+.........      ..
T Consensus       122 ~---------~~------------~~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~~------~~  170 (299)
T 2wm3_A          122 T---------AG------------RLAAAHFDGKGEVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQK------AP  170 (299)
T ss_dssp             T---------TT------------SCCCHHHHHHHHHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCEE------CT
T ss_pred             C---------CC------------cccCchhhHHHHHHHHHHH----CCCCEEEEeecHHhhhchhhcCCcc------cC
Confidence            1         11            1345899999999998864    3899999999999997532111000      00


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcEEEeccCCCHHHHHHHHHHhCCC
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRYICCAVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y~~~~~~~t~~e~~~~i~~~~~~  241 (293)
                      .+....+....    ++..++|+|++|+|++++.++.++.  .+.+|+++++.+|+.|+++.+.+.+|+
T Consensus       171 ~g~~~~~~~~~----~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g~  235 (299)
T 2wm3_A          171 DGKSYLLSLPT----GDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRK  235 (299)
T ss_dssp             TSSSEEECCCC----TTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCSEEECHHHHHHHHHHHHSS
T ss_pred             CCCEEEEEecC----CCCccceecHHHHHHHHHHHHcChhhhCCeEEEeeeccCCHHHHHHHHHHHHCC
Confidence            12111111111    1457899999999999999998642  455788877889999999999999885

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.80  E-value=1.1e-20  Score=149.09  Aligned_cols=164  Identities=16%  Similarity=0.058  Sum_probs=122.8

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++++++.+|++|++.+.+++  +|+|||+|+.......++. .+++.|+.++.++++++++.+ +++||++||.. .++ 
T Consensus        46 ~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~-~~~-  119 (215)
T 2a35_A           46 PRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTIKEAGSEE-AFRAVDFDLPLAVGKRALEMG-ARHYLVVSALG-ADA-  119 (215)
T ss_dssp             TTEECCBSCHHHHGGGCCSC--CSEEEECCCCCHHHHSSHH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTT-CCT-
T ss_pred             CCceEEeccccCHHHHHHhh--hcEEEECeeeccccCCCHH-HHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcc-cCC-
Confidence            47888999999999998888  9999999997542223444 788999999999999999988 89999999986 332 


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCce-EEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNID-LITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~-~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                                              .|.+.|+.+|..+|++++.    .+++ ++++||+.+||++....   .+.    .
T Consensus       120 ------------------------~~~~~y~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~---~~~----~  164 (215)
T 2a35_A          120 ------------------------KSSIFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFR---LAE----I  164 (215)
T ss_dssp             ------------------------TCSSHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEE---GGG----G
T ss_pred             ------------------------CCccHHHHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcch---HHH----H
Confidence                                    1335899999999998864    4899 99999999999976421   111    1


Q ss_pred             HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEe-ccCCCH
Q 035985          174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICC-AVNTSV  228 (293)
Q Consensus       174 ~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~t~  228 (293)
                      +.+...  ...      ++.++++|++|+|++++.+++++. ++.|+++ ++.+++
T Consensus       165 ~~~~~~--~~~------~~~~~~i~~~Dva~~~~~~~~~~~-~~~~~i~~~~~~~~  211 (215)
T 2a35_A          165 LAAPIA--RIL------PGKYHGIEACDLARALWRLALEEG-KGVRFVESDELRKL  211 (215)
T ss_dssp             TTCCCC------------CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEEHHHHHHH
T ss_pred             HHHhhh--hcc------CCCcCcEeHHHHHHHHHHHHhcCC-CCceEEcHHHHHHh
Confidence            111111  111      225789999999999999998875 6788775 444433

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.78  E-value=1.9e-19  Score=152.23  Aligned_cols=180  Identities=13%  Similarity=0.076  Sum_probs=131.1

Q ss_pred             CCeEEEecC-CCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch-hc
Q 035985           15 GELKIFRAD-LTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA-VS   92 (293)
Q Consensus        15 ~~v~~v~~D-l~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~-~~   92 (293)
                      ++++++.+| ++|++++.++++++|+|||+++...          ...|..+ .+++++|++.+++++|||+||... .+
T Consensus        51 ~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~~----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~  119 (352)
T 1xgk_A           51 PNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQA----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLY  119 (352)
T ss_dssp             TTEEEEESCCTTCHHHHHHHHTTCSEEEECCCSTT----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGT
T ss_pred             CCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCCC----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCcccccc
Confidence            478999999 9999999999999999999986421          1236666 999999998754789999999751 22


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAAT  172 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~  172 (293)
                      +.                        .+.+.|+.+|..+|++++.    .+++++++||+ +||++........+..  .
T Consensus       120 ~~------------------------~~~~~y~~sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~~~~~~~~--~  168 (352)
T 1xgk_A          120 GP------------------------WPAVPMWAPKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSLPYPLFQM--E  168 (352)
T ss_dssp             SS------------------------CCCCTTTHHHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSSSCSSCBE--E
T ss_pred             CC------------------------CCCccHHHHHHHHHHHHHH----cCCCEEEEecc-eecCCchhcccccccc--c
Confidence            10                        1235799999999999865    38999999976 7888654321111100  0


Q ss_pred             HHhCCccc--ccccccccccCCCCcceeH-HhHHHHHHHhhccCC---CCCcEEEeccCCCHHHHHHHHHHhCCC
Q 035985          173 LITGNDFL--LNGLKGMQMLSGSISISHV-EDVCRAHIFLAEKES---ASGRYICCAVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       173 ~~~~~~~~--~~~~~g~~~~~~~~~~v~v-~D~a~~~~~~~~~~~---~~~~y~~~~~~~t~~e~~~~i~~~~~~  241 (293)
                      ....+...  +...+     ++.++++|+ +|+|++++.++.++.   .+++|+++++.+|++|+++.+.+.+|.
T Consensus       169 ~~~~g~~~~~~~~~~-----~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G~  238 (352)
T 1xgk_A          169 LMPDGTFEWHAPFDP-----DIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR  238 (352)
T ss_dssp             ECTTSCEEEEESSCT-----TSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred             ccCCCceEEeeccCC-----CCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHCC
Confidence            01122211  12212     457899999 899999999998752   467898877889999999999999884

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.76  E-value=4.1e-18  Score=136.72  Aligned_cols=164  Identities=12%  Similarity=0.008  Sum_probs=122.1

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      +++.++.+|++|++++.++++++|+|||+||..... .... ..++.|+.++.++++++++.+ +++||++||.+ .++.
T Consensus        63 ~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~~-~~~~-~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~-~~~~  138 (242)
T 2bka_A           63 KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGK-AGAE-GFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKG-ADKS  138 (242)
T ss_dssp             GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHHH-HHHH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTT-CCTT
T ss_pred             CCceEEecCcCCHHHHHHHhcCCCEEEECCCccccc-CCcc-cceeeeHHHHHHHHHHHHHCC-CCEEEEEccCc-CCCC
Confidence            368899999999999999999999999999964321 1223 778899999999999999988 89999999986 3321


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCc-eEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNI-DLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                                               +.+.|+.+|...|.+++.    .++ +++++||+.+||+....   .....+...
T Consensus       139 -------------------------~~~~Y~~sK~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~---~~~~~~~~~  186 (242)
T 2bka_A          139 -------------------------SNFLYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQES---RPGEWLVRK  186 (242)
T ss_dssp             -------------------------CSSHHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGG---SHHHHHHHH
T ss_pred             -------------------------CcchHHHHHHHHHHHHHh----cCCCCeEEEcCceecCCCCCC---cHHHHHHHH
Confidence                                     235899999999988754    367 69999999999996532   122222222


Q ss_pred             HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEec
Q 035985          174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCA  223 (293)
Q Consensus       174 ~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~  223 (293)
                      ..+..... . +       ...+++++|+|++++.++.++...+.|++++
T Consensus       187 ~~~~~~~~-~-~-------~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~  227 (242)
T 2bka_A          187 FFGSLPDS-W-A-------SGHSVPVVTVVRAMLNNVVRPRDKQMELLEN  227 (242)
T ss_dssp             HHCSCCTT-G-G-------GGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred             hhcccCcc-c-c-------CCcccCHHHHHHHHHHHHhCccccCeeEeeH
Confidence            22221111 1 1       2358999999999999999887777776644

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.76  E-value=2.2e-17  Score=129.09  Aligned_cols=156  Identities=13%  Similarity=0.126  Sum_probs=115.9

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++++++.+|++|++++.++++++|+|||+|+....  .    ...+.|+.++.++++++++.+ +++||++||.+ .++.
T Consensus        46 ~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~--~----~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~-~~~~  117 (206)
T 1hdo_A           46 RPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND--L----SPTTVMSEGARNIVAAMKAHG-VDKVVACTSAF-LLWD  117 (206)
T ss_dssp             CCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC--C----SCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGG-GTSC
T ss_pred             CceEEEEecCCCHHHHHHHHcCCCEEEECccCCCC--C----CccchHHHHHHHHHHHHHHhC-CCeEEEEeeee-eccC
Confidence            57999999999999999999999999999987543  1    224589999999999999988 89999999987 4432


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      ...                   .+.+.+.|+.+|..+|.+++    +.+++++++||+.+ +++....  ...       
T Consensus       118 ~~~-------------------~~~~~~~y~~~K~~~e~~~~----~~~i~~~~lrp~~~-~~~~~~~--~~~-------  164 (206)
T 1hdo_A          118 PTK-------------------VPPRLQAVTDDHIRMHKVLR----ESGLKYVAVMPPHI-GDQPLTG--AYT-------  164 (206)
T ss_dssp             TTC-------------------SCGGGHHHHHHHHHHHHHHH----HTCSEEEEECCSEE-ECCCCCS--CCE-------
T ss_pred             ccc-------------------ccccchhHHHHHHHHHHHHH----hCCCCEEEEeCCcc-cCCCCCc--ceE-------
Confidence            210                   00145689999999999874    35899999999997 4332111  000       


Q ss_pred             hCCcccccccccccccCCC-CcceeHHhHHHHHHHhhccCCC-CCcEEEec
Q 035985          175 TGNDFLLNGLKGMQMLSGS-ISISHVEDVCRAHIFLAEKESA-SGRYICCA  223 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~-~~~v~v~D~a~~~~~~~~~~~~-~~~y~~~~  223 (293)
                          ..+   .     +.. .+++|++|+|++++.+++++.. +.+|++++
T Consensus       165 ----~~~---~-----~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~  203 (206)
T 1hdo_A          165 ----VTL---D-----GRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH  203 (206)
T ss_dssp             ----EES---S-----SCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred             ----ecc---c-----CCCCCCccCHHHHHHHHHHHhcCccccccceeeec
Confidence                001   1     011 5899999999999999988764 44777754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.75  E-value=1.7e-18  Score=144.36  Aligned_cols=184  Identities=15%  Similarity=0.109  Sum_probs=127.4

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++++|++|++++.++++++|+|||+++.....          .|+.++.+++++|++.+++++||+ |+.    +.
T Consensus        55 ~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~----------~~~~~~~~l~~aa~~~g~v~~~v~-S~~----g~  119 (313)
T 1qyd_A           55 LGAKLIEASLDDHQRLVDALKQVDVVISALAGGVLS----------HHILEQLKLVEAIKEAGNIKRFLP-SEF----GM  119 (313)
T ss_dssp             TTCEEECCCSSCHHHHHHHHTTCSEEEECCCCSSSS----------TTTTTHHHHHHHHHHSCCCSEEEC-SCC----SS
T ss_pred             CCeEEEeCCCCCHHHHHHHHhCCCEEEECCccccch----------hhHHHHHHHHHHHHhcCCCceEEe-cCC----cC
Confidence            579999999999999999999999999999864321          256678999999999866899986 432    21


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCC-CchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPP-TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p-~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                      ...   . .  +.         +..| .+.| .+|..+|++++    +.+++++++||+.++|+......... .  ...
T Consensus       120 ~~~---~-~--~~---------~~~p~~~~y-~sK~~~e~~~~----~~g~~~~ilrp~~~~~~~~~~~~~~~-~--~~~  176 (313)
T 1qyd_A          120 DPD---I-M--EH---------ALQPGSITF-IDKRKVRRAIE----AASIPYTYVSSNMFAGYFAGSLAQLD-G--HMM  176 (313)
T ss_dssp             CTT---S-C--CC---------CCSSTTHHH-HHHHHHHHHHH----HTTCCBCEEECCEEHHHHTTTSSCTT-C--CSS
T ss_pred             Ccc---c-c--cc---------CCCCCcchH-HHHHHHHHHHH----hcCCCeEEEEeceecccccccccccc-c--ccc
Confidence            110   1 1  11         2223 4578 99999998875    35899999999988875322110000 0  000


Q ss_pred             HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEE-Ee-ccCCCHHHHHHHHHHhCCC
Q 035985          174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYI-CC-AVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       174 ~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~-~~-~~~~t~~e~~~~i~~~~~~  241 (293)
                      ..++...+.+.+     +..++++|++|+|++++.++.++.. ++.|+ ++ ++.+|+.|+++.+.+.+|+
T Consensus       177 ~~~~~~~~~~~g-----~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  242 (313)
T 1qyd_A          177 PPRDKVLIYGDG-----NVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ  242 (313)
T ss_dssp             CCSSEECCBTTS-----CSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             CCCCeEEEeCCC-----CceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCC
Confidence            112222222222     3468999999999999999987653 44564 44 4789999999999999884

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.75  E-value=5.8e-18  Score=138.94  Aligned_cols=192  Identities=15%  Similarity=0.119  Sum_probs=128.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHH----HHHHHHHHhcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQG----VVNVLKACTKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~----~~~l~~~~~~~~   77 (293)
                      .+++++++|++|++++.++++       ++|+|||+||.....      ..+.. ..++.|+.+    ++.++..+++.+
T Consensus        51 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~  129 (281)
T 3m1a_A           51 DRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELR-DLFELHVFGPARLTRALLPQMRERG  129 (281)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            479999999999998888775       789999999975321      11122 578899999    555555556666


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||..+..                        +..+.+.|+.+|...|.+++.++.+   .|+++++++|+.+
T Consensus       130 -~~~iv~~sS~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  184 (281)
T 3m1a_A          130 -SGSVVNISSFGGQL------------------------SFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAF  184 (281)
T ss_dssp             -CEEEEEECCGGGTC------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred             -CCEEEEEcCccccC------------------------CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcc
Confidence             68999999986433                        2234568999999999999998877   6899999999999


Q ss_pred             cCCCCCCCCC---ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEe-ccCCCHHH
Q 035985          155 SGPSLTPDIP---SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICC-AVNTSVPE  230 (293)
Q Consensus       155 ~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~-~~~~t~~e  230 (293)
                      .++.......   .....+...............       ...+.+++|+|++++.+++.+..+.+|+++ +....+.+
T Consensus       185 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g  257 (281)
T 3m1a_A          185 RTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSD-------GSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTG  257 (281)
T ss_dssp             CCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC------------CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHH
T ss_pred             ccccccccccccCCcchhhHHHhHHHHHHHhhcc-------CCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHH
Confidence            8875432110   001011111100000011111       356788999999999999988877788774 44455566


Q ss_pred             HHHHHHHhC
Q 035985          231 LAKFLNKRF  239 (293)
Q Consensus       231 ~~~~i~~~~  239 (293)
                      ....+.+.+
T Consensus       258 ~~~~i~~~~  266 (281)
T 3m1a_A          258 HLDSVRAEL  266 (281)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            666555543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.72  E-value=2.6e-18  Score=142.90  Aligned_cols=178  Identities=20%  Similarity=0.234  Sum_probs=124.6

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++++|++|++++.++++++|+|||+++...              +.++.+++++|++.+++++||+ |+.+    .
T Consensus        56 ~~v~~v~~D~~d~~~l~~~~~~~d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~~g----~  116 (308)
T 1qyc_A           56 SGANIVHGSIDDHASLVEAVKNVDVVISTVGSLQ--------------IESQVNIIKAIKEVGTVKRFFP-SEFG----N  116 (308)
T ss_dssp             TTCEEECCCTTCHHHHHHHHHTCSEEEECCCGGG--------------SGGGHHHHHHHHHHCCCSEEEC-SCCS----S
T ss_pred             CCCEEEEeccCCHHHHHHHHcCCCEEEECCcchh--------------hhhHHHHHHHHHhcCCCceEee-cccc----c
Confidence            5799999999999999999999999999997532              3346789999998865889984 4422    1


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCC-CchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPP-TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p-~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                      .       .+|..         +..| .+.| .+|..+|.+++.    .+++++++||+.++|..........    ...
T Consensus       117 ~-------~~~~~---------~~~p~~~~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~~----~~~  171 (308)
T 1qyc_A          117 D-------VDNVH---------AVEPAKSVF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAG----LTA  171 (308)
T ss_dssp             C-------TTSCC---------CCTTHHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTT----CSS
T ss_pred             C-------ccccc---------cCCcchhHH-HHHHHHHHHHHh----cCCCeEEEEeceecccccccccccc----ccC
Confidence            1       12222         2233 3468 999999988754    3899999999998875332110000    000


Q ss_pred             HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEE-e-ccCCCHHHHHHHHHHhCCC
Q 035985          174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYIC-C-AVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       174 ~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~-~-~~~~t~~e~~~~i~~~~~~  241 (293)
                      ..++...+.+.+     +..++|+|++|+|++++.++.++.. ++.|++ + ++.+|++|+++.+.+.+|+
T Consensus       172 ~~~~~~~~~~~~-----~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  237 (308)
T 1qyc_A          172 PPRDKVVILGDG-----NARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK  237 (308)
T ss_dssp             CCSSEEEEETTS-----CCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred             CCCCceEEecCC-----CceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCC
Confidence            122222222222     4468999999999999999987654 445544 4 4789999999999999984

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.71  E-value=2e-16  Score=129.56  Aligned_cols=187  Identities=19%  Similarity=0.253  Sum_probs=132.8

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC---C-----CCccccchhHHHHHHHHHHHHHhcC----
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS---S-----DDPETDMIKPAIQGVVNVLKACTKT----   76 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~---~-----~~~~~~~~~~n~~~~~~l~~~~~~~----   76 (293)
                      ++.++.+|++|++++.++++       ++|+|||+||.....   .     .+.. ..++.|+.++.++++++...    
T Consensus        65 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~  143 (278)
T 2bgk_A           65 VISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFK-RVMDINVYGAFLVAKHAARVMIPA  143 (278)
T ss_dssp             TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHGGG
T ss_pred             ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHhhc
Confidence            78999999999999888876       799999999975321   0     1122 67889999999999887653    


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                      + ..+||++||..++.+.+                       .+...|+.+|...|.+++.++.+   .|++++++||+.
T Consensus       144 ~-~~~iv~isS~~~~~~~~-----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~  199 (278)
T 2bgk_A          144 K-KGSIVFTASISSFTAGE-----------------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYI  199 (278)
T ss_dssp             T-CEEEEEECCGGGTCCCT-----------------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESC
T ss_pred             C-CCeEEEEeeccccCCCC-----------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEece
Confidence            4 67999999987432111                       13458999999999999998765   489999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEE-eccCCCHH
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYIC-CAVNTSVP  229 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~-~~~~~t~~  229 (293)
                      ++++....................+            .....+++++|+|++++.++..+.  ..| .|++ +|..++++
T Consensus       200 v~t~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  267 (278)
T 2bgk_A          200 VASPLLTDVFGVDSSRVEELAHQAA------------NLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNP  267 (278)
T ss_dssp             CSCCCCTTSSSCCHHHHHHHHHHTC------------SSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCT
T ss_pred             ecchhhhhhcccchhHHHHhhhccc------------ccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCC
Confidence            9998654322111111111111110            002458899999999999987542  334 6677 56789999


Q ss_pred             HHHHHHHHhC
Q 035985          230 ELAKFLNKRF  239 (293)
Q Consensus       230 e~~~~i~~~~  239 (293)
                      |+++.+.+.+
T Consensus       268 e~~~~i~~~~  277 (278)
T 2bgk_A          268 AFPTALKHGL  277 (278)
T ss_dssp             HHHHHSCSCC
T ss_pred             ccchhhhhhc
Confidence            9999887643

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.71  E-value=4.3e-17  Score=127.59  Aligned_cols=148  Identities=20%  Similarity=0.152  Sum_probs=115.0

Q ss_pred             EEEecCCCCCcchhhhhc---CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEeccc
Q 035985           18 KIFRADLTDEASFDAPIS---RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSA   88 (293)
Q Consensus        18 ~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~   88 (293)
                      +++.+|++|++++.++++   ++|+|||+||.....      ..+.. ..++.|+.++.++++++++.+ .++||++||.
T Consensus        45 ~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~  122 (207)
T 2yut_A           45 RALPADLADELEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVE-EMLAAHLLTAAFVLKHARFQK-GARAVFFGAY  122 (207)
T ss_dssp             EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHH-HHHHHHHHHHHHHHHHCCEEE-EEEEEEECCC
T ss_pred             cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHhcC-CcEEEEEcCh
Confidence            888999999999999988   899999999975421      12223 678999999999999997766 7899999998


Q ss_pred             chhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCCCCCCCCc
Q 035985           89 AAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPSLTPDIPS  165 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~  165 (293)
                      ..+.+                        ..+.+.|+.+|...|.+++.++.+   .|++++++||+.++++...     
T Consensus       123 ~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~-----  173 (207)
T 2yut_A          123 PRYVQ------------------------VPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA-----  173 (207)
T ss_dssp             HHHHS------------------------STTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG-----
T ss_pred             hhccC------------------------CCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc-----
Confidence            74431                        124468999999999999998776   5899999999999886410     


Q ss_pred             cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCc
Q 035985          166 SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGR  218 (293)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~  218 (293)
                                +        .+    .....+++++|+|++++.+++++..+.+
T Consensus       174 ----------~--------~~----~~~~~~~~~~dva~~~~~~~~~~~~~~~  204 (207)
T 2yut_A          174 ----------P--------LG----GPPKGALSPEEAARKVLEGLFREPVPAL  204 (207)
T ss_dssp             ----------G--------GT----SCCTTCBCHHHHHHHHHHHHC--CCCSC
T ss_pred             ----------c--------cC----CCCCCCCCHHHHHHHHHHHHhCCCCccc
Confidence                      0        00    1136789999999999999987765544

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.70  E-value=5.5e-17  Score=134.76  Aligned_cols=178  Identities=16%  Similarity=0.122  Sum_probs=123.6

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++++|++|++++.++++++|+|||+|+...              +.++.+++++|++.+.+++||+ |+.    +.
T Consensus        55 ~~v~~v~~D~~d~~~l~~~~~~~d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~~----g~  115 (307)
T 2gas_A           55 LGVILLEGDINDHETLVKAIKQVDIVICAAGRLL--------------IEDQVKIIKAIKEAGNVKKFFP-SEF----GL  115 (307)
T ss_dssp             TTCEEEECCTTCHHHHHHHHTTCSEEEECSSSSC--------------GGGHHHHHHHHHHHCCCSEEEC-SCC----SS
T ss_pred             CCCEEEEeCCCCHHHHHHHHhCCCEEEECCcccc--------------cccHHHHHHHHHhcCCceEEee-ccc----cc
Confidence            4799999999999999999999999999998532              3457889999998865889984 432    11


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCC-CchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPP-TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p-~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                      .       .+|..         +..| .+.| .+|..+|.+++.    .+++++++||+.++++.........    ...
T Consensus       116 ~-------~~~~~---------~~~p~~~~y-~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~~~~~~~----~~~  170 (307)
T 2gas_A          116 D-------VDRHD---------AVEPVRQVF-EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLRNLAQLD----ATD  170 (307)
T ss_dssp             C-------TTSCC---------CCTTHHHHH-HHHHHHHHHHHH----HTCCBEEEECCEETTTTGGGTTCTT----CSS
T ss_pred             C-------ccccc---------CCCcchhHH-HHHHHHHHHHHH----cCCCeEEEEcceeeccccccccccc----ccc
Confidence            1       12222         2233 3578 999999988753    4899999999988875421100000    000


Q ss_pred             HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEE-Ee-ccCCCHHHHHHHHHHhCCC
Q 035985          174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYI-CC-AVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       174 ~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~-~~-~~~~t~~e~~~~i~~~~~~  241 (293)
                      ..++...+.+.+     +..++++|++|+|++++.++.++.. ++.|+ .+ ++.+|++|+++.+.+.+|+
T Consensus       171 ~~~~~~~~~~~~-----~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~  236 (307)
T 2gas_A          171 PPRDKVVILGDG-----NVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGK  236 (307)
T ss_dssp             CCSSEEEEETTS-----CSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred             CCCCeEEEecCC-----CcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCC
Confidence            112222222211     3468999999999999999987654 34554 44 4789999999999999884

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.69  E-value=1.4e-17  Score=139.29  Aligned_cols=174  Identities=16%  Similarity=0.136  Sum_probs=123.4

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++++|++|++++.++++++|+|||+|+...              +.++.+++++|++.+.+++||+ |+.    +.
T Consensus        56 ~~v~~v~~D~~d~~~l~~a~~~~d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~~----g~  116 (321)
T 3c1o_A           56 MGVTIIEGEMEEHEKMVSVLKQVDIVISALPFPM--------------ISSQIHIINAIKAAGNIKRFLP-SDF----GC  116 (321)
T ss_dssp             TTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG--------------SGGGHHHHHHHHHHCCCCEEEC-SCC----SS
T ss_pred             CCcEEEEecCCCHHHHHHHHcCCCEEEECCCccc--------------hhhHHHHHHHHHHhCCccEEec-ccc----cc
Confidence            4799999999999999999999999999997532              3456889999998765789983 332    21


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCC-CchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPP-TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p-~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                      .       .+|..         +..| .+.| .+|..+|.+++.    .+++++++||+.++++.        ...+...
T Consensus       117 ~-------~~~~~---------~~~p~~~~y-~sK~~~e~~~~~----~~~~~~~lrp~~~~~~~--------~~~~~~~  167 (321)
T 3c1o_A          117 E-------EDRIK---------PLPPFESVL-EKKRIIRRAIEA----AALPYTYVSANCFGAYF--------VNYLLHP  167 (321)
T ss_dssp             C-------GGGCC---------CCHHHHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHH--------HHHHHCC
T ss_pred             C-------ccccc---------cCCCcchHH-HHHHHHHHHHHH----cCCCeEEEEeceecccc--------ccccccc
Confidence            1       12222         2223 3578 999999988853    38999999999887642        1111110


Q ss_pred             ----HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEEE-e-ccCCCHHHHHHHHHHhCCC
Q 035985          174 ----ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYIC-C-AVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       174 ----~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~~-~-~~~~t~~e~~~~i~~~~~~  241 (293)
                          ..++...+...+     +..++|+|++|+|++++.++.++.. +..|++ + ++.+|++|+++.+.+.+|+
T Consensus       168 ~~~~~~~~~~~~~~~~-----~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~  237 (321)
T 3c1o_A          168 SPHPNRNDDIVIYGTG-----ETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGL  237 (321)
T ss_dssp             CSSCCTTSCEEEETTS-----CCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred             cccccccCceEEecCC-----CcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCC
Confidence                122222222222     4468999999999999999987654 445644 4 5789999999999999884

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.69  E-value=2.1e-17  Score=138.04  Aligned_cols=174  Identities=17%  Similarity=0.129  Sum_probs=123.0

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++++|++|++++.++++++|+|||+++...              +.++.+++++|++.+.+++||+ |+.    +.
T Consensus        58 ~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~~----g~  118 (318)
T 2r6j_A           58 LGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ--------------ILDQFKILEAIKVAGNIKRFLP-SDF----GV  118 (318)
T ss_dssp             TTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG--------------STTHHHHHHHHHHHCCCCEEEC-SCC----SS
T ss_pred             CCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh--------------hHHHHHHHHHHHhcCCCCEEEe-ecc----cc
Confidence            4799999999999999999999999999997531              3346889999998865889985 432    11


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCC-CchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPP-TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p-~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                      .       .+|..         +..| .+.| .+|..+|.+++.    .+++++++||+.+++.        ++..+...
T Consensus       119 ~-------~~~~~---------~~~p~~~~y-~sK~~~e~~~~~----~~~~~~~lr~~~~~~~--------~~~~~~~~  169 (318)
T 2r6j_A          119 E-------EDRIN---------ALPPFEALI-ERKRMIRRAIEE----ANIPYTYVSANCFASY--------FINYLLRP  169 (318)
T ss_dssp             C-------TTTCC---------CCHHHHHHH-HHHHHHHHHHHH----TTCCBEEEECCEEHHH--------HHHHHHCT
T ss_pred             C-------ccccc---------CCCCcchhH-HHHHHHHHHHHh----cCCCeEEEEcceehhh--------hhhhhccc
Confidence            1       12222         2222 2468 999999988753    5899999999877653        12222211


Q ss_pred             -HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC-CCcEE-Ee-ccCCCHHHHHHHHHHhCCC
Q 035985          174 -ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA-SGRYI-CC-AVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       174 -~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~-~~~y~-~~-~~~~t~~e~~~~i~~~~~~  241 (293)
                       ..++...+...+     +..++|+|++|++++++.++.++.. ++.|+ ++ ++.+|+.|+++.+.+.+|+
T Consensus       170 ~~~~~~~~~~~~~-----~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  236 (318)
T 2r6j_A          170 YDPKDEITVYGTG-----EAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGK  236 (318)
T ss_dssp             TCCCSEEEEETTS-----CCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             cCCCCceEEecCC-----CceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCC
Confidence             122232232222     3468999999999999999987653 44554 43 5789999999999999884

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.65  E-value=5.7e-16  Score=125.18  Aligned_cols=171  Identities=17%  Similarity=0.162  Sum_probs=121.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-----CCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-----DDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||......     .++. ..++.|+.++.++++++.    +.+ 
T Consensus        60 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~-  137 (255)
T 1fmc_A           60 GQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFR-RAYELNVFSFFHLSQLVAPEMEKNG-  137 (255)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            468899999999999888876       7999999999754211     1122 678899999999988875    345 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      .++||++||...+.                        +..+...|+.+|...|.+++.++.+.   +++++++||+.++
T Consensus       138 ~~~iv~~sS~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~  193 (255)
T 1fmc_A          138 GGVILTITSMAAEN------------------------KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAIL  193 (255)
T ss_dssp             CEEEEEECCGGGTC------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred             CcEEEEEcchhhcC------------------------CCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCc
Confidence            68999999986332                        11244689999999999999887664   8999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHH-hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEE-eccCCCH
Q 035985          156 GPSLTPDIPSSVALAATLI-TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYIC-CAVNTSV  228 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~-~~~~~t~  228 (293)
                      ++......   ...+...+ .+.+              ...+++++|+|++++.++..+.   .+.+|++ +|..+|+
T Consensus       194 t~~~~~~~---~~~~~~~~~~~~~--------------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          194 TDALKSVI---TPEIEQKMLQHTP--------------IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             SHHHHTTC---CHHHHHHHHHTCS--------------SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             chhhhhcc---ChHHHHHHHhcCC--------------cccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence            87432211   11111111 1111              2347889999999999987543   2347777 4555554

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.64  E-value=7.8e-17  Score=130.20  Aligned_cols=188  Identities=15%  Similarity=0.083  Sum_probs=120.6

Q ss_pred             EecCCCCCcchhhhhc----CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcC----CCccEEEEecccchh
Q 035985           20 FRADLTDEASFDAPIS----RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKT----KTVKRVILTSSAAAV   91 (293)
Q Consensus        20 v~~Dl~d~~~~~~~~~----~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~   91 (293)
                      +++|++|++++.++++    ++|+|||+||.... ...+. ..++.|+.++.++++++.+.    + .++||++||..++
T Consensus        42 ~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~-~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~  118 (255)
T 2dkn_A           42 LSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGVT-AANSG-LVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAAT  118 (255)
T ss_dssp             TTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCTT-SSCHH-HHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGG
T ss_pred             ccCCcccHHHHHHHHHHcCCCccEEEECCCCCCc-chhHH-HHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccc
Confidence            4578888888888876    89999999997542 12344 88999999999999977653    4 6899999999755


Q ss_pred             cccccCCCCccccC-------CCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCCCCC
Q 035985           92 SINAQNVTGLVMDE-------KNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPSLTP  161 (293)
Q Consensus        92 ~~~~~~~~~~~~~E-------~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~  161 (293)
                      .+....   .+..|       +.+..  +......+.+.|+.+|...|.+++.++.+   .+++++++||+.++|+... 
T Consensus       119 ~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~-  192 (255)
T 2dkn_A          119 QPGAAE---LPMVEAMLAGDEARAIE--LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ-  192 (255)
T ss_dssp             STTGGG---CHHHHHHHHTCHHHHHH--HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH-
T ss_pred             cccccc---cchhhhhcccchhhhhh--hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh-
Confidence            432111   11111       10000  00001134568999999999999988765   5899999999999987421 


Q ss_pred             CCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC--CC-CCcEEEe-ccCCCHH
Q 035985          162 DIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE--SA-SGRYICC-AVNTSVP  229 (293)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~--~~-~~~y~~~-~~~~t~~  229 (293)
                             ......... .......+     ....+++++|+|++++.++..+  .. +..|+++ |..++++
T Consensus       193 -------~~~~~~~~~-~~~~~~~~-----~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  251 (255)
T 2dkn_A          193 -------ASKADPRYG-ESTRRFVA-----PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMR  251 (255)
T ss_dssp             -------HHHHCTTTH-HHHHSCCC-----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHC
T ss_pred             -------hcccchhhH-HHHHHHHH-----HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeee
Confidence                   110000000 00000000     1357899999999999999875  23 3467774 4444443

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.64  E-value=4.6e-16  Score=128.96  Aligned_cols=187  Identities=13%  Similarity=0.085  Sum_probs=126.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++++|++|++++.++++       .+|+|||+||.....      ..+.. ..++.|+.++.++++++..    ..
T Consensus        76 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~  154 (302)
T 1w6u_A           76 NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWK-TITDIVLNGTAFVTLEIGKQLIKAQ  154 (302)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHhc
Confidence            468999999999998887765       469999999965321      11122 6788999999999887753    22


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                      ...+||++||..+..+.                        .+...|+.+|...|.+++.++.+   .|++++++||+.+
T Consensus       155 ~~~~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v  210 (302)
T 1w6u_A          155 KGAAFLSITTIYAETGS------------------------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPI  210 (302)
T ss_dssp             CCEEEEEECCTHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred             CCCEEEEEcccccccCC------------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccC
Confidence            25799999998644321                        23468999999999999998876   6899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEE-eccCCCHHH
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYIC-CAVNTSVPE  230 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~-~~~~~t~~e  230 (293)
                      +++........... ....+....      .       ...+++++|+|++++.++....   .+..|++ +|..+++++
T Consensus       211 ~t~~~~~~~~~~~~-~~~~~~~~~------p-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~  276 (302)
T 1w6u_A          211 KTKGAFSRLDPTGT-FEKEMIGRI------P-------CGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISG  276 (302)
T ss_dssp             CC------CCTTSH-HHHHHHTTC------T-------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHS
T ss_pred             CCcchhhhcccchh-hHHHHHhcC------C-------cCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCC
Confidence            98743221111000 001111110      0       2347889999999999987543   2346677 556778888


Q ss_pred             HHHHHHHhCC
Q 035985          231 LAKFLNKRFP  240 (293)
Q Consensus       231 ~~~~i~~~~~  240 (293)
                      +++.+.+..+
T Consensus       277 ~~~~~~~~~g  286 (302)
T 1w6u_A          277 EFNDLRKVTK  286 (302)
T ss_dssp             TTGGGGGCCH
T ss_pred             ccccchhhcc
Confidence            8777766554

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.62  E-value=3.2e-15  Score=122.32  Aligned_cols=185  Identities=16%  Similarity=0.174  Sum_probs=116.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC----------CCCccccchhHHHHHHHHHHHHHhcC-
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS----------SDDPETDMIKPAIQGVVNVLKACTKT-   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~-   76 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||.....          ..+.. ..++.|+.++.++++++... 
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~  136 (278)
T 1spx_A           58 QNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYD-ATLNLNLRSVIALTKKAVPHL  136 (278)
T ss_dssp             GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHH-HHHHHHTHHHHHHHHHHHHHH
T ss_pred             CceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHH
Confidence            368899999999998888876       799999999975321          11122 67889999999999888654 


Q ss_pred             ---CCccEEEEecccch-hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEE
Q 035985           77 ---KTVKRVILTSSAAA-VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITV  149 (293)
Q Consensus        77 ---~~~~~~v~~SS~~~-~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~il  149 (293)
                         +  .+||++||... +.+                        ..+...|+.+|...+.+++.++.+   .|++++++
T Consensus       137 ~~~~--g~iv~isS~~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v  190 (278)
T 1spx_A          137 SSTK--GEIVNISSIASGLHA------------------------TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSI  190 (278)
T ss_dssp             HHHT--CEEEEECCTTSSSSC------------------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred             hhcC--CeEEEEecccccccC------------------------CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEE
Confidence               3  69999999763 221                        123358999999999999988765   48999999


Q ss_pred             ccCCccCCCCCCCC---Ccc--HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCC-cEE
Q 035985          150 IPSLMSGPSLTPDI---PSS--VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASG-RYI  220 (293)
Q Consensus       150 R~~~v~G~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~-~y~  220 (293)
                      +|+.+.++......   ...  +......+.. .  .   +       ...+.+++|+|++++.++..+.   ..| .++
T Consensus       191 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~--~---p-------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~  257 (278)
T 1spx_A          191 SPGLVATGFGSAMGMPEETSKKFYSTMATMKE-C--V---P-------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLV  257 (278)
T ss_dssp             EECCBCCCC--------------HHHHHHHHH-H--C---T-------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEE
T ss_pred             ecCcccCccccccccCchhhhhhhHHHHHHHh-c--C---C-------CcCCCCHHHHHHHHHHHcCccccCcccCcEEE
Confidence            99999987532210   000  0000111110 0  0   0       1347889999999999887542   334 567


Q ss_pred             E-eccCCCHHHHHHHHHHhC
Q 035985          221 C-CAVNTSVPELAKFLNKRF  239 (293)
Q Consensus       221 ~-~~~~~t~~e~~~~i~~~~  239 (293)
                      + +|...++.++++.+.+..
T Consensus       258 vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          258 VDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             ESTTGGGC------------
T ss_pred             ECCCcccccCcccccHHHHh
Confidence            7 567899999999888753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.60  E-value=1.7e-14  Score=115.09  Aligned_cols=155  Identities=14%  Similarity=0.111  Sum_probs=99.7

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++++|++|++++.++++++|+|||+|+...        .     ...+.++++++++.+ +++||++||..++.+.
T Consensus        67 ~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~--------~-----~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~  132 (236)
T 3qvo_A           67 TNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED--------L-----DIQANSVIAAMKACD-VKRLIFVLSLGIYDEV  132 (236)
T ss_dssp             TTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT--------H-----HHHHHHHHHHHHHTT-CCEEEEECCCCC----
T ss_pred             CCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc--------h-----hHHHHHHHHHHHHcC-CCEEEEEecceecCCC
Confidence            4799999999999999999999999999997421        1     124678999999998 8999999998744322


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      +...  ....+..         ...+...|    ..+|..+    ++.+++++++||+.++++.....            
T Consensus       133 ~~~~--~~~~~~~---------~~~~~~~~----~~~~~~l----~~~gi~~~~vrPg~i~~~~~~~~------------  181 (236)
T 3qvo_A          133 PGKF--VEWNNAV---------IGEPLKPF----RRAADAI----EASGLEYTILRPAWLTDEDIIDY------------  181 (236)
T ss_dssp             -----------------------CGGGHHH----HHHHHHH----HTSCSEEEEEEECEEECCSCCCC------------
T ss_pred             Cccc--ccchhhc---------ccchHHHH----HHHHHHH----HHCCCCEEEEeCCcccCCCCcce------------
Confidence            2111  1222222         22222334    4444443    35699999999999998743210            


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcEEEec
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRYICCA  223 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y~~~~  223 (293)
                         .. .....     .....+++++|+|++++.++.++.  .+..|++++
T Consensus       182 ---~~-~~~~~-----~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~  223 (236)
T 3qvo_A          182 ---EL-TSRNE-----PFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQ  223 (236)
T ss_dssp             ---EE-ECTTS-----CCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEEC
T ss_pred             ---EE-eccCC-----CCCCcEECHHHHHHHHHHHHcCcccccCeeEEecC
Confidence               00 00000     012358999999999999998876  445776654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.58  E-value=1.4e-14  Score=117.35  Aligned_cols=173  Identities=16%  Similarity=0.134  Sum_probs=119.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCC-CCC-C--Cc--cccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVN-FSS-D--DP--ETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~-~~~-~--~~--~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++++|++|++++.++++       ++|+|||+||... ... .  ..  ....++.|+.++.++++++..    .+
T Consensus        62 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  141 (260)
T 3awd_A           62 HDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK  141 (260)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC
Confidence            468999999999998888775       6899999999654 111 1  11  126788999999999988764    34


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||.....+.                      +..|...|+.+|...|.+++.++.+   .+++++++||+.+
T Consensus       142 -~~~iv~~sS~~~~~~~----------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v  198 (260)
T 3awd_A          142 -QGVIVAIGSMSGLIVN----------------------RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYI  198 (260)
T ss_dssp             -CEEEEEECCGGGTSCC----------------------SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred             -CCEEEEEecchhcccC----------------------CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeee
Confidence             5799999997633211                      1123468999999999999998876   5899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEeccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAVN  225 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~~  225 (293)
                      +++.......  ...+...+....      .       ...+++++|+|++++.++....  ..| .|+++|..
T Consensus       199 ~t~~~~~~~~--~~~~~~~~~~~~------~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          199 ETTLTRFGME--KPELYDAWIAGT------P-------MGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             CCTTTHHHHT--CHHHHHHHHHTC------T-------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             ccchhhcccC--ChHHHHHHHhcC------C-------cCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence            9986431000  011111111110      0       2347899999999999887532  234 66776543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.58  E-value=5.2e-15  Score=118.72  Aligned_cols=169  Identities=18%  Similarity=0.162  Sum_probs=117.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc---CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC----CCccE
Q 035985           15 GELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT----KTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~   81 (293)
                      ++++++.+|++|++++.++++   .+|+|||+||.....      ..+.. ..++.|+.++.++++++...    +...+
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~~~~~  130 (244)
T 1cyd_A           52 PGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFD-RSFSVNLRSVFQVSQMVARDMINRGVPGS  130 (244)
T ss_dssp             TTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             cCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHH-HHHhhhhHHHHHHHHHHHHHHHhCCCCeE
Confidence            367888999999999999886   489999999965421      11122 57889999999998887653    21469


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~  158 (293)
                      ||++||..++.+                        ..+...|+.+|...|.+++.++.+   .+++++++||+.++++.
T Consensus       131 iv~~sS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~  186 (244)
T 1cyd_A          131 IVNVSSMVAHVT------------------------FPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM  186 (244)
T ss_dssp             EEEECCGGGTSC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred             EEEEcchhhcCC------------------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence            999999864321                        123458999999999999998776   48999999999999874


Q ss_pred             CCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          159 LTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ......  ...+...+...             ....++++++|+|++++.+++.+.  ..| .++++|
T Consensus       187 ~~~~~~--~~~~~~~~~~~-------------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  239 (244)
T 1cyd_A          187 GKKVSA--DPEFARKLKER-------------HPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDA  239 (244)
T ss_dssp             HHHHTC--CHHHHHHHHHH-------------STTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred             cccccc--CHHHHHHHHhc-------------CCccCCCCHHHHHHHHHHHhCchhhcccCCEEEECC
Confidence            221000  01111111110             013678999999999999997653  234 456644

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.58  E-value=3.4e-15  Score=116.32  Aligned_cols=153  Identities=16%  Similarity=0.079  Sum_probs=110.7

Q ss_pred             EEecCCCCCcchhhhhcC---CCEEEEecccCCCCCC---Cc--cccchhHHHHHHHHHHHHHhcCC-CccEEEEecccc
Q 035985           19 IFRADLTDEASFDAPISR---SDIVFHVATPVNFSSD---DP--ETDMIKPAIQGVVNVLKACTKTK-TVKRVILTSSAA   89 (293)
Q Consensus        19 ~v~~Dl~d~~~~~~~~~~---~d~Vih~a~~~~~~~~---~~--~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~   89 (293)
                      .+.+|++|++++.+++++   +|+|||+||.......   ..  ....++.|+.++.++++++.+.- +..+||++||..
T Consensus        38 ~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~  117 (202)
T 3d7l_A           38 DVTVDITNIDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIM  117 (202)
T ss_dssp             SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGG
T ss_pred             ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchh
Confidence            467899999999888875   8999999996532210   11  12566789999999999998761 026899999975


Q ss_pred             hhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccCCCCCCCCCccH
Q 035985           90 AVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSGPSLTPDIPSSV  167 (293)
Q Consensus        90 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~~~~  167 (293)
                      +..                        +..+...|+.+|...|.+++.++.+.  +++++++||+.++++..        
T Consensus       118 ~~~------------------------~~~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~--------  165 (202)
T 3d7l_A          118 MED------------------------PIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD--------  165 (202)
T ss_dssp             GTS------------------------CCTTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH--------
T ss_pred             hcC------------------------CCCccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh--------
Confidence            322                        11234689999999999999988764  89999999999998631        


Q ss_pred             HHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE
Q 035985          168 ALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC  221 (293)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~  221 (293)
                          ..  +.     .       ...+++++++|+|++++.++.....+..|++
T Consensus       166 ----~~--~~-----~-------~~~~~~~~~~dva~~~~~~~~~~~~G~~~~v  201 (202)
T 3d7l_A          166 ----KL--EP-----F-------FEGFLPVPAAKVARAFEKSVFGAQTGESYQV  201 (202)
T ss_dssp             ----HH--GG-----G-------STTCCCBCHHHHHHHHHHHHHSCCCSCEEEE
T ss_pred             ----hh--hh-----h-------ccccCCCCHHHHHHHHHHhhhccccCceEec
Confidence                00  00     0       1146789999999999988854434446654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.57  E-value=3.7e-14  Score=113.87  Aligned_cols=167  Identities=17%  Similarity=0.150  Sum_probs=120.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++++|++|.+++.++++       ++|++||+||......      +++. ..++.|+.++.++++++    ++.+
T Consensus        54 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~~  132 (246)
T 3osu_A           54 VDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWD-DVIDTNLKGVFNCIQKATPQMLRQR  132 (246)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC
Confidence            468899999999998888775       7899999999764221      1122 58899999999999988    4445


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||...+.+.                        .+...|+.+|...+.+.+.++.+   .|+++.+++|+.+
T Consensus       133 -~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v  187 (246)
T 3osu_A          133 -SGAIINLSSVVGAVGN------------------------PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFI  187 (246)
T ss_dssp             -CEEEEEECCHHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CCEEEEEcchhhcCCC------------------------CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCC
Confidence             5799999998755432                        23458999999999999988774   4899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC---CCcEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA---SGRYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~---~~~y~~~~~  224 (293)
                      .++.....    .......+.....             ...+.+.+|+|++++.++.....   +..++++|.
T Consensus       188 ~t~~~~~~----~~~~~~~~~~~~p-------------~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG  243 (246)
T 3osu_A          188 VSDMTDAL----SDELKEQMLTQIP-------------LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG  243 (246)
T ss_dssp             GGGCCSCS----CHHHHHHHHTTCT-------------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCCccccc----CHHHHHHHHhcCC-------------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            98764321    1222222221111             24467899999999998876532   346677553

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.57  E-value=1.2e-14  Score=117.60  Aligned_cols=175  Identities=19%  Similarity=0.159  Sum_probs=119.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      ++.. ..++.|+.++.++++++...    +
T Consensus        54 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~  132 (259)
T 4e6p_A           54 PAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYE-KLFAINVAGTLFTLQAAARQMIAQG  132 (259)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            468999999999998888776       7999999999754211      1222 67789999999999887543    2


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      ...++|++||...+.+.                        .+...|+.+|...+.+.+.++.+.   |+++.+++|+.+
T Consensus       133 ~~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v  188 (259)
T 4e6p_A          133 RGGKIINMASQAGRRGE------------------------ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVV  188 (259)
T ss_dssp             SCEEEEEECCGGGTSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred             CCeEEEEECChhhccCC------------------------CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCC
Confidence            13589999998754322                        234589999999999999988764   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCc--ccc-cccccccccCCCCcceeHHhHHHHHHHhhccCC--C-CCcEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGND--FLL-NGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--A-SGRYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~-~~~y~~~~  223 (293)
                      +++....     ...+........  ... ....+    .....+.+++|+|++++.++....  . +..|+++|
T Consensus       189 ~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdg  254 (259)
T 4e6p_A          189 DGEHWDG-----VDALFARYENRPRGEKKRLVGEA----VPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDG  254 (259)
T ss_dssp             CSTTHHH-----HHHHHHHHHTCCTTHHHHHHHHH----STTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred             ccchhhh-----hhhhhhhhccCChHHHHHHHhcc----CCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECc
Confidence            9875311     111111111110  000 00011    113668999999999999887543  2 44677754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.56  E-value=3.5e-14  Score=116.94  Aligned_cols=179  Identities=13%  Similarity=0.077  Sum_probs=121.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc---CCCEEEEecccCCC----CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecc
Q 035985           15 GELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNF----SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSS   87 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS   87 (293)
                      .++.++++|++|++++.++++   ++|++||+||....    ...+.. ..+++|+.++.++++++.... .+++|++||
T Consensus        62 ~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~-~~riv~isS  139 (291)
T 3rd5_A           62 GQVEVRELDLQDLSSVRRFADGVSGADVLINNAGIMAVPYALTVDGFE-SQIGTNHLGHFALTNLLLPRL-TDRVVTVSS  139 (291)
T ss_dssp             SEEEEEECCTTCHHHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCB-HHHHHHTHHHHHHHHHHGGGE-EEEEEEECC
T ss_pred             CCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHH-HhheeEeec
Confidence            478999999999999998887   57999999997642    223344 789999999999999999887 689999999


Q ss_pred             cchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---C--ceEEEEccCCccCCCCCCC
Q 035985           88 AAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---N--IDLITVIPSLMSGPSLTPD  162 (293)
Q Consensus        88 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~--~~~~ilR~~~v~G~~~~~~  162 (293)
                      ...+.+.....  ....+..         +..+...|+.+|...+.+++.++.+.   +  ++++.++|+.|..+.....
T Consensus       140 ~~~~~~~~~~~--~~~~~~~---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~  208 (291)
T 3rd5_A          140 MAHWPGRINLE--DLNWRSR---------RYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS  208 (291)
T ss_dssp             GGGTTCCCCSS--CTTCSSS---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----
T ss_pred             hhhccCCCCcc--ccccccc---------CCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc
Confidence            87554432211  1111111         33455689999999999999887664   4  9999999999977643221


Q ss_pred             CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcE-EEec
Q 035985          163 IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRY-ICCA  223 (293)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y-~~~~  223 (293)
                      ...    ....+..    ..         ..+-....+|+|+.++.++..+...|.| .++|
T Consensus       209 ~~~----~~~~~~~----~~---------~~~~~~~~~~~A~~~~~l~~~~~~~G~~~~vdg  253 (291)
T 3rd5_A          209 GRK----LGDALMS----AA---------TRVVATDADFGARQTLYAASQDLPGDSFVGPRF  253 (291)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHHHHSCCCTTCEEEETT
T ss_pred             chH----HHHHHHH----HH---------HHHHhCCHHHHHHHHHHHHcCCCCCCceeCCcc
Confidence            100    1111000    00         0233345999999999998887666766 4543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.56  E-value=5.7e-14  Score=113.66  Aligned_cols=165  Identities=13%  Similarity=0.159  Sum_probs=119.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      .+.. ..++.|+.++.++++++    ++.+
T Consensus        68 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~  146 (260)
T 3un1_A           68 PDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYD-HNLGVNVAGFFHITQRAAAEMLKQG  146 (260)
T ss_dssp             TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC
Confidence            368999999999998888776       7999999999764221      1122 67889999999999887    4555


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..++|++||.......                      +..+...|+.+|...+.+.+.++.+.   |+++.+++|+.+
T Consensus       147 -~g~iv~isS~~~~~~~----------------------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v  203 (260)
T 3un1_A          147 -SGHIVSITTSLVDQPM----------------------VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVI  203 (260)
T ss_dssp             -CEEEEEECCTTTTSCB----------------------TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCB
T ss_pred             -CcEEEEEechhhccCC----------------------CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCC
Confidence             6899999997532111                      22345689999999999999998876   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~~  223 (293)
                      +++.....   .    ...+.+..      .       ...+.+++|+|++++.+.+.....| .++++|
T Consensus       204 ~t~~~~~~---~----~~~~~~~~------p-------~~r~~~~~dva~av~~L~~~~~itG~~i~vdG  253 (260)
T 3un1_A          204 KTPMHPAE---T----HSTLAGLH------P-------VGRMGEIRDVVDAVLYLEHAGFITGEILHVDG  253 (260)
T ss_dssp             CCTTSCGG---G----HHHHHTTS------T-------TSSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             CCCCCCHH---H----HHHHhccC------C-------CCCCcCHHHHHHHHHHhcccCCCCCcEEEECC
Confidence            98854321   1    11111111      0       2457789999999999865554445 567754

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.56  E-value=1.9e-14  Score=113.61  Aligned_cols=146  Identities=14%  Similarity=0.137  Sum_probs=103.8

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      ++++++++|++|++++.++++++|+|||+|+..              |+. +.++++++++.+ +++||++||..++.+.
T Consensus        52 ~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~--------------n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~  115 (221)
T 3r6d_A           52 ERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES--------------GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEF  115 (221)
T ss_dssp             TTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC--------------HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCS
T ss_pred             CceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC--------------Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCC
Confidence            589999999999999999999999999999742              344 889999999988 8999999998743321


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      +.     ...+..         .....+.|+.+|...|.+++    ..+++++++||+.++++......           
T Consensus       116 ~~-----~~~~~~---------~~~~~~~y~~~K~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~-----------  166 (221)
T 3r6d_A          116 PV-----ALEKWT---------FDNLPISYVQGERQARNVLR----ESNLNYTILRLTWLYNDPEXTDY-----------  166 (221)
T ss_dssp             CH-----HHHHHH---------HHTSCHHHHHHHHHHHHHHH----HSCSEEEEEEECEEECCTTCCCC-----------
T ss_pred             Cc-----cccccc---------ccccccHHHHHHHHHHHHHH----hCCCCEEEEechhhcCCCCCcce-----------
Confidence            11     111000         00111279999999998875    35999999999999987322110           


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhh--ccCC
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLA--EKES  214 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~--~~~~  214 (293)
                          . ..... .   .....+++.+|+|++++.++  .++.
T Consensus       167 ----~-~~~~~-~---~~~~~~~~~~dvA~~~~~l~~~~~~~  199 (221)
T 3r6d_A          167 ----E-LIPEG-A---QFNDAQVSREAVVKAIFDILHAADET  199 (221)
T ss_dssp             ----E-EECTT-S---CCCCCEEEHHHHHHHHHHHHTCSCCG
T ss_pred             ----e-eccCC-c---cCCCceeeHHHHHHHHHHHHHhcChh
Confidence                0 00000 0   01234899999999999999  7654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.56  E-value=1.5e-14  Score=117.45  Aligned_cols=172  Identities=22%  Similarity=0.217  Sum_probs=114.9

Q ss_pred             CCeEEEecCCCCCcchhhhhcC-------C-CEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC----
Q 035985           15 GELKIFRADLTDEASFDAPISR-------S-DIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT----   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~-------~-d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----   76 (293)
                      .++.++++|++|++++.+++++       + |+|||+||.....      ..+.. ..++.|+.++.++++++...    
T Consensus        63 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~  141 (264)
T 2pd6_A           63 GNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWD-KVIAVNLKGTFLVTQAAAQALVSN  141 (264)
T ss_dssp             -CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHH-HHHhhccHHHHHHHHHHHHHHHhc
Confidence            3688999999999988887754       4 9999999975421      11222 67889999999999988654    


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                      +...+||++||....++.                        .+...|+.+|...+.+++.++.+   .|++++++||+.
T Consensus       142 ~~~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~  197 (264)
T 2pd6_A          142 GCRGSIINISSIVGKVGN------------------------VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGF  197 (264)
T ss_dssp             TCCEEEEEECCTHHHHCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred             CCCceEEEECChhhccCC------------------------CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeec
Confidence            213689999998644422                        23458999999999999988776   589999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec-cCCCH
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA-VNTSV  228 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~-~~~t~  228 (293)
                      ++++.....    ...+...+.      ....       ...+++++|+|++++.++....  ..| .+.++| ..++.
T Consensus       198 v~t~~~~~~----~~~~~~~~~------~~~~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  259 (264)
T 2pd6_A          198 IATPMTQKV----PQKVVDKIT------EMIP-------MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAE  259 (264)
T ss_dssp             BCSCC--------------CTG------GGCT-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC----
T ss_pred             ccccchhhc----CHHHHHHHH------HhCC-------CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceecc
Confidence            999864321    011111000      0000       2347889999999999887542  334 556644 44443

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.55  E-value=7.3e-14  Score=113.79  Aligned_cols=169  Identities=21%  Similarity=0.201  Sum_probs=120.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-C-------CCCccccchhHHHHHHHHHHHHH----hc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-S-------SDDPETDMIKPAIQGVVNVLKAC----TK   75 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-~-------~~~~~~~~~~~n~~~~~~l~~~~----~~   75 (293)
                      .++.++.+|++|++++.++++       ++|++||+||.... .       .++.. ..+++|+.++.++++++    ++
T Consensus        57 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~  135 (271)
T 3tzq_B           57 RGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWD-DTFTVNARGTMLMCKYAIPRLIS  135 (271)
T ss_dssp             TTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHh
Confidence            478999999999998888876       79999999997632 1       01122 67889999999999988    55


Q ss_pred             CCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccC
Q 035985           76 TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPS  152 (293)
Q Consensus        76 ~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~  152 (293)
                      .+ ..+||++||...+.+.                        .+...|+.+|...+.+++.++.+   +|+++.+++|+
T Consensus       136 ~~-~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG  190 (271)
T 3tzq_B          136 AG-GGAIVNISSATAHAAY------------------------DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPG  190 (271)
T ss_dssp             TT-CEEEEEECCGGGTSBC------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             cC-CCEEEEECCHHHcCCC------------------------CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeC
Confidence            55 6799999998644321                        23458999999999999998876   58999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEeccC
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAVN  225 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~~  225 (293)
                      .++++.......   ......+.....             ..-+...+|+|++++.++....  ..| .++++|..
T Consensus       191 ~v~t~~~~~~~~---~~~~~~~~~~~~-------------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          191 LVRTPRLEVGLP---QPIVDIFATHHL-------------AGRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             CBCCTTTC---C---HHHHHHHHTTST-------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCcCccccccCC---HHHHHHHHhcCC-------------CCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence            999986542211   112222211111             1336779999999999987643  334 55775543

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.55  E-value=2.9e-14  Score=114.36  Aligned_cols=166  Identities=16%  Similarity=0.177  Sum_probs=116.6

Q ss_pred             CeEEEecCCCCCcchhhhhc---CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC----CCccEE
Q 035985           16 ELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT----KTVKRV   82 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~   82 (293)
                      +++++++|++|++++.++++   ++|+|||+||......      .+.. ..++.|+.++.++++++...    +...+|
T Consensus        53 ~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~~~~~~~~~~~~~~~~~~i  131 (244)
T 3d3w_A           53 GIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFD-RSFEVNLRAVIQVSQIVARGLIARGVPGAI  131 (244)
T ss_dssp             TCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhCCCCcEE
Confidence            67888999999999998886   5899999999754211      1122 67889999999988887653    214789


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPSL  159 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~  159 (293)
                      |++||...+.                        +..+.+.|+.+|...|.+++.++.+   .+++++++||+.++++..
T Consensus       132 v~~sS~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~  187 (244)
T 3d3w_A          132 VNVSSQCSQR------------------------AVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMG  187 (244)
T ss_dssp             EEECCGGGTS------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTH
T ss_pred             EEeCchhhcc------------------------CCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccch
Confidence            9999986332                        1123468999999999999998765   489999999999998753


Q ss_pred             CCCC--CccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          160 TPDI--PSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       160 ~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ....  .....   ....+.       .       ...+++++|+|++++.++....  ..| .|+++|
T Consensus       188 ~~~~~~~~~~~---~~~~~~-------~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  239 (244)
T 3d3w_A          188 QATWSDPHKAK---TMLNRI-------P-------LGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEG  239 (244)
T ss_dssp             HHHSCSTTHHH---HHHHTC-------T-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhccChHHHH---HHHhhC-------C-------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            2100  01111   111110       0       2468899999999999997542  234 667754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.54  E-value=5.8e-14  Score=112.98  Aligned_cols=169  Identities=18%  Similarity=0.212  Sum_probs=117.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC---------CCccccchhHHHHHHHHHHHHHh----
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS---------DDPETDMIKPAIQGVVNVLKACT----   74 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~----   74 (293)
                      .++.++++|++|++++.++++       ++|+|||+||......         .+.. ..++.|+.++.++++++.    
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~  130 (250)
T 2cfc_A           52 DKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFD-KVMAVNVRGIFLGCRAVLPHML  130 (250)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHH
Confidence            468999999999998888875       7999999999754221         1122 677899999977766654    


Q ss_pred             cCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEcc
Q 035985           75 KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIP  151 (293)
Q Consensus        75 ~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~  151 (293)
                      +.+ .++||++||...+.+.                        .+...|+.+|...+.+++.++.+.   +++++++||
T Consensus       131 ~~~-~~~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~P  185 (250)
T 2cfc_A          131 LQG-AGVIVNIASVASLVAF------------------------PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCP  185 (250)
T ss_dssp             HHT-CEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             hCC-CCEEEEECChhhccCC------------------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEe
Confidence            345 6899999998644321                        234689999999999999987664   899999999


Q ss_pred             CCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          152 SLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       152 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      +.++++.......  ...+...+....      .       ...+.+.+|+|++++.++..+.  ..| .++++|.
T Consensus       186 g~v~t~~~~~~~~--~~~~~~~~~~~~------~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          186 GMIETPMTQWRLD--QPELRDQVLARI------P-------QKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             CSBCSTTTHHHHT--SHHHHHHHHTTC------T-------TCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             CcCccCccccccC--CHHHHHHHHhcC------C-------CCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence            9999986421000  011111111110      0       2347889999999999987643  234 5566543

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.54  E-value=3e-14  Score=115.76  Aligned_cols=167  Identities=15%  Similarity=0.108  Sum_probs=104.2

Q ss_pred             CCeEEEecCCCCCcchhhhh--------cCCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHH----hcC
Q 035985           15 GELKIFRADLTDEASFDAPI--------SRSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKAC----TKT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~--------~~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~   76 (293)
                      .++.++.+|++|++++.+++        .++|+|||+||.....      ..+.. ..++.|+.++.++++++    ++.
T Consensus        63 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~g~~~l~~~~~~~~~~~  141 (266)
T 1xq1_A           63 FQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFS-FHISTNLESAYHLSQLAHPLLKAS  141 (266)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhc
Confidence            46889999999998888776        4689999999975321      11122 57889999999999988    445


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + .++||++||..++.+.                        .+...|+.+|...+.+++.++.+.   +++++++||+.
T Consensus       142 ~-~~~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~  196 (266)
T 1xq1_A          142 G-CGNIIFMSSIAGVVSA------------------------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAV  196 (266)
T ss_dssp             S-SCEEEEEC----------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred             C-CcEEEEEccchhccCC------------------------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCC
Confidence            5 6899999998643321                        123589999999999999887764   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ++++......   ...+...+...   .   .       ...+++++|+|++++.++..+.  ..| .++++|
T Consensus       197 v~t~~~~~~~---~~~~~~~~~~~---~---~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  253 (266)
T 1xq1_A          197 IATPLAEAVY---DDEFKKVVISR---K---P-------LGRFGEPEEVSSLVAFLCMPAASYITGQTICVDG  253 (266)
T ss_dssp             CC-----------------------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCC
T ss_pred             Cccchhhhhc---CHHHHHHHHhc---C---C-------CCCCcCHHHHHHHHHHHcCccccCccCcEEEEcC
Confidence            9998643211   00001110000   0   0       1247889999999999887542  234 556644

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.54  E-value=2e-14  Score=115.39  Aligned_cols=167  Identities=16%  Similarity=0.118  Sum_probs=114.1

Q ss_pred             CeEE-EecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHH----HHhcCC
Q 035985           16 ELKI-FRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLK----ACTKTK   77 (293)
Q Consensus        16 ~v~~-v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~----~~~~~~   77 (293)
                      ++.. +.+|++|++++.++++       ++|+|||+||.....      ..+.. ..++.|+.++.++++    .+++.+
T Consensus        52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~g~~~l~~~~~~~~~~~~  130 (245)
T 2ph3_A           52 PLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWE-AVLEANLSAVFRTTREAVKLMMKAR  130 (245)
T ss_dssp             SCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             ceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHhhccHHHHHHHHHHHHHHHhcC
Confidence            5666 8999999998887754       799999999975421      11122 678899999555554    444556


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       .++||++||...+++.+                        +...|+.+|...+.+++.++.+.   +++++++||+.+
T Consensus       131 -~~~iv~~sS~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  185 (245)
T 2ph3_A          131 -FGRIVNITSVVGILGNP------------------------GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFI  185 (245)
T ss_dssp             -CEEEEEECCTHHHHCCS------------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CCEEEEEeChhhccCCC------------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEee
Confidence             78999999986554321                        23589999999999999887664   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--C-CCcEEEeccC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--A-SGRYICCAVN  225 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~-~~~y~~~~~~  225 (293)
                      +++.....    ............      .       ...+++++|+|++++.++..+.  . +..|+++|..
T Consensus       186 ~t~~~~~~----~~~~~~~~~~~~------~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          186 ETEMTERL----PQEVKEAYLKQI------P-------AGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             CCHHHHTS----CHHHHHHHHHTC------T-------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             cCcchhhc----CHHHHHHHHhcC------C-------CCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            88643211    011111111110      0       2457899999999999987643  2 3356776543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.54  E-value=1.2e-14  Score=117.60  Aligned_cols=172  Identities=17%  Similarity=0.149  Sum_probs=118.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEeccc-CCCCC---CC--ccccchhHHHHHHHHHHHHHhcC-----
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATP-VNFSS---DD--PETDMIKPAIQGVVNVLKACTKT-----   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~-~~~~~---~~--~~~~~~~~n~~~~~~l~~~~~~~-----   76 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||. .....   ..  ..+..++.|+.++.++++++...     
T Consensus        57 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  136 (258)
T 3afn_B           57 GDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAA  136 (258)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcc
Confidence            468999999999999888876       79999999996 32110   01  11257789999999988876421     


Q ss_pred             ---CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEc
Q 035985           77 ---KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVI  150 (293)
Q Consensus        77 ---~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR  150 (293)
                         +...+||++||.......                       ..+...|+.+|...|.+++.++.+.   +++++++|
T Consensus       137 ~~~~~~~~iv~~sS~~~~~~~-----------------------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~  193 (258)
T 3afn_B          137 KASGQTSAVISTGSIAGHTGG-----------------------GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVS  193 (258)
T ss_dssp             HHHTSCEEEEEECCTHHHHCC-----------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             cCCCCCcEEEEecchhhccCC-----------------------CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEe
Confidence               112689999997633200                       1234689999999999999887654   89999999


Q ss_pred             cCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC---CCCC-cEEEeccCC
Q 035985          151 PSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE---SASG-RYICCAVNT  226 (293)
Q Consensus       151 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~---~~~~-~y~~~~~~~  226 (293)
                      |+.++++.....    ...+...+....      .       ...+++++|+|++++.++..+   ...| .|+++|...
T Consensus       194 Pg~v~t~~~~~~----~~~~~~~~~~~~------~-------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          194 PGTVDTAFHADK----TQDVRDRISNGI------P-------MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             ECSBSSGGGTTC----CHHHHHHHHTTC------T-------TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTSS
T ss_pred             CCCccccccccc----CHHHHHHHhccC------C-------CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCcc
Confidence            999999864321    112222221111      1       246889999999999998754   2234 667765443

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.54  E-value=4e-14  Score=113.75  Aligned_cols=167  Identities=20%  Similarity=0.147  Sum_probs=109.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC------CCCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF------SSDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||....      ...+.. ..++.|+.++.++++++..    .+
T Consensus        55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~  133 (247)
T 2hq1_A           55 INVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWD-DVLNTNLKSAYLCTKAVSKIMLKQK  133 (247)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC---------------CH-HHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            468999999999998888775       79999999997532      222334 7889999998888887753    35


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||....++.+                        +...|+.+|...|.+++.++.+.   ++++++++|+.+
T Consensus       134 -~~~iv~~sS~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  188 (247)
T 2hq1_A          134 -SGKIINITSIAGIIGNA------------------------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGII  188 (247)
T ss_dssp             -CEEEEEECC---------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CcEEEEEcChhhccCCC------------------------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEE
Confidence             67999999986454321                        23589999999999999887654   899999999998


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~~~  224 (293)
                      .++....    ........+....      .       ...+++++|+|++++.++..+.   .+..|+++|.
T Consensus       189 ~t~~~~~----~~~~~~~~~~~~~------~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          189 KTDMTDV----LPDKVKEMYLNNI------P-------LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGG  244 (247)
T ss_dssp             CCHHHHT----SCHHHHHHHHTTS------T-------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             eccchhh----cchHHHHHHHhhC------C-------CCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence            7653111    0011111111110      0       2457899999999999887542   2346777543

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.53  E-value=4.2e-14  Score=113.65  Aligned_cols=167  Identities=16%  Similarity=0.089  Sum_probs=116.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++.    +.+
T Consensus        57 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~  135 (248)
T 2pnf_A           57 VKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWE-EVLKVNLTGTFLVTQNSLRKMIKQR  135 (248)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHCHHHHHHT
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHH-HHHhhhhHHHHHHHHHHHHHHHhcC
Confidence            468899999999999888875       7999999999754211      1122 678899999977766553    445


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       .++||++||...+++.+                        +...|+.+|...+.+++.++.+.   +++++++||+.+
T Consensus       136 -~~~iv~~sS~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v  190 (248)
T 2pnf_A          136 -WGRIVNISSVVGFTGNV------------------------GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFI  190 (248)
T ss_dssp             -CEEEEEECCHHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CcEEEEEccHHhcCCCC------------------------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEecee
Confidence             68999999986554321                        23589999999999999887653   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--C-CCcEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--A-SGRYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~-~~~y~~~~~  224 (293)
                      +++.....    ............      .       ...+++++|+|++++.++....  . +..|+++|.
T Consensus       191 ~t~~~~~~----~~~~~~~~~~~~------~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          191 ETDMTAVL----SEEIKQKYKEQI------P-------LGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             CCGGGGGS----CHHHHHHHHHTC------T-------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCchhhhc----cHHHHHHHHhcC------C-------CCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence            88753211    111111111110      0       2457899999999999887532  2 346677543

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.53  E-value=1.5e-14  Score=117.30  Aligned_cols=175  Identities=14%  Similarity=0.117  Sum_probs=117.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++++|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++.    +.+
T Consensus        57 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~  135 (263)
T 3ai3_A           57 VRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQ-FYWELLVMAAVRLARGLVPGMRARG  135 (263)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            468899999999998888775       7999999999754211      1122 678899999999888774    345


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||...+.+.                        .+...|+.+|...+.+.+.++.+   .|++++++||+.+
T Consensus       136 -~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  190 (263)
T 3ai3_A          136 -GGAIIHNASICAVQPL------------------------WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLI  190 (263)
T ss_dssp             -CEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred             -CcEEEEECchhhcCCC------------------------CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcc
Confidence             6899999998643211                        23358999999999999998776   4899999999999


Q ss_pred             cCCCCCCCCC-------ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEe-c
Q 035985          155 SGPSLTPDIP-------SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICC-A  223 (293)
Q Consensus       155 ~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~-~  223 (293)
                      +++.......       .........+....     ..       ...+.+++|+|++++.++..+.  ..| .|+++ |
T Consensus       191 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p-------~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG  258 (263)
T 3ai3_A          191 LTPDWIKTAKELTKDNGGDWKGYLQSVADEH-----AP-------IKRFASPEELANFFVFLCSERATYSVGSAYFVDGG  258 (263)
T ss_dssp             CCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH-----CT-------TCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred             cCcchhhhhHhhhcccCCcHHHHHHHHHhcC-----CC-------CCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            9874211000       00000001100000     01       2457899999999999987543  234 56774 4


Q ss_pred             cCCC
Q 035985          224 VNTS  227 (293)
Q Consensus       224 ~~~t  227 (293)
                      ...|
T Consensus       259 ~~~s  262 (263)
T 3ai3_A          259 MLKT  262 (263)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            4443

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.53  E-value=8e-14  Score=112.67  Aligned_cols=168  Identities=17%  Similarity=0.165  Sum_probs=114.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC----------CCccccchhHHHHHHHHHHHHHhcC-
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS----------DDPETDMIKPAIQGVVNVLKACTKT-   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~~-   76 (293)
                      .++.++++|++|++++.++++       ++|++||+||......          .++. ..++.|+.++.++++++... 
T Consensus        53 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m  131 (257)
T 3tpc_A           53 AAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFA-RTVAVNLIGTFNMIRLAAEVM  131 (257)
T ss_dssp             --CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHH-HHHHHHTHHHHHHHHHHHHHH
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHH
Confidence            468999999999998888775       7999999999764221          1122 67889999999999888643 


Q ss_pred             --------CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCce
Q 035985           77 --------KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNID  145 (293)
Q Consensus        77 --------~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~  145 (293)
                              ++..++|++||...+.+.                        .+...|+.+|...+.+.+.++.+   .|++
T Consensus       132 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~  187 (257)
T 3tpc_A          132 SQGEPDADGERGVIVNTASIAAFDGQ------------------------IGQAAYAASKGGVAALTLPAARELARFGIR  187 (257)
T ss_dssp             TTSCCCTTSCCEEEEEECCTHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HhccccCCCCCeEEEEEechhhccCC------------------------CCCcchHHHHHHHHHHHHHHHHHHHHcCeE
Confidence                    124689999998754422                        23458999999999999988776   5899


Q ss_pred             EEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEec
Q 035985          146 LITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICCA  223 (293)
Q Consensus       146 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~~  223 (293)
                      +.+++|+.|.++.....    .......+... .++           ...+.+++|+|++++.+++.....| .++++|
T Consensus       188 vn~v~PG~v~t~~~~~~----~~~~~~~~~~~-~p~-----------~~r~~~~~dva~~v~~l~s~~~itG~~i~vdG  250 (257)
T 3tpc_A          188 VVTIAPGIFDTPMMAGM----PQDVQDALAAS-VPF-----------PPRLGRAEEYAALVKHICENTMLNGEVIRLDG  250 (257)
T ss_dssp             EEEEEECCBSCC------------------CC-SSS-----------SCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             EEEEEeCCCCChhhccC----CHHHHHHHHhc-CCC-----------CCCCCCHHHHHHHHHHHcccCCcCCcEEEECC
Confidence            99999999988753221    01111111110 000           1346789999999999998755555 456644

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.52  E-value=7.8e-15  Score=120.23  Aligned_cols=186  Identities=18%  Similarity=0.136  Sum_probs=127.6

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHhcCC---C
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACTKTK---T   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~   78 (293)
                      ++.++++|++|++++.++++       ++|++||+||.....       .++.. ..++.|+.++.++++++...-   +
T Consensus        64 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~~  142 (281)
T 3svt_A           64 AIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWR-RTVDLNVNGTMYVLKHAAREMVRGG  142 (281)
T ss_dssp             EEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            68899999999998887765       689999999973211       11122 678899999999998776431   1


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      -.+||++||...+.+.                        .+...|+.+|...+.+++.++.++   ++++.+++|+.+.
T Consensus       143 ~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~  198 (281)
T 3svt_A          143 GGSFVGISSIAASNTH------------------------RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIR  198 (281)
T ss_dssp             CEEEEEECCHHHHSCC------------------------TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CcEEEEEeCHHHcCCC------------------------CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCc
Confidence            3599999998754321                        234589999999999999988764   6999999999998


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEE-eccCCC-HHH
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYIC-CAVNTS-VPE  230 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~-~~~~~t-~~e  230 (293)
                      ++....... . ......+...   .   .       ...+.+++|+|++++.++....   .+..+++ +|...+ ..+
T Consensus       199 t~~~~~~~~-~-~~~~~~~~~~---~---p-------~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~  263 (281)
T 3svt_A          199 TDLVAAITE-S-AELSSDYAMC---T---P-------LPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPD  263 (281)
T ss_dssp             SGGGHHHHT-C-HHHHHHHHHH---C---S-------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCC
T ss_pred             Ccchhhccc-C-HHHHHHHHhc---C---C-------CCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCc
Confidence            764211000 0 0011111000   0   0       2346789999999999987643   2346677 455555 677


Q ss_pred             HHHHHHHhCCC
Q 035985          231 LAKFLNKRFPE  241 (293)
Q Consensus       231 ~~~~i~~~~~~  241 (293)
                      +.+.+.+.++.
T Consensus       264 ~~~~~~~~~~~  274 (281)
T 3svt_A          264 FSAMLEPVFGR  274 (281)
T ss_dssp             CHHHHHHHHCT
T ss_pred             chhccccccCC
Confidence            88888877764

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.52  E-value=9.8e-14  Score=111.56  Aligned_cols=163  Identities=15%  Similarity=0.119  Sum_probs=111.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc---------CCCEEEEecccCC-CCC------CCccccchhHHHHHHHHHHHHHhcC--
Q 035985           15 GELKIFRADLTDEASFDAPIS---------RSDIVFHVATPVN-FSS------DDPETDMIKPAIQGVVNVLKACTKT--   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---------~~d~Vih~a~~~~-~~~------~~~~~~~~~~n~~~~~~l~~~~~~~--   76 (293)
                      .++.++.+|++|++++.++++         ++|+|||+||... ...      .+. +..++.|+.++.++++++...  
T Consensus        51 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~  129 (250)
T 1yo6_A           51 SRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVI-AEQLDVNTTSVVLLTQKLLPLLK  129 (250)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHH-HHHHHHHTHHHHHHHHHTHHHHH
T ss_pred             CceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHh
Confidence            578999999999998888876         8999999999754 111      112 267889999999998887543  


Q ss_pred             --------CC----ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--
Q 035985           77 --------KT----VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--  142 (293)
Q Consensus        77 --------~~----~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--  142 (293)
                              +.    ..+||++||...+.+...        +..         ...+...|+.+|...+.+++.++.++  
T Consensus       130 ~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------~~~---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~  192 (250)
T 1yo6_A          130 NAASKESGDQLSVSRAAVITISSGLGSITDNT--------SGS---------AQFPVLAYRMSKAAINMFGRTLAVDLKD  192 (250)
T ss_dssp             HHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC--------STT---------SSSCBHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred             hcccccCCCcccCCCcEEEEeccCccccCCcc--------ccc---------ccCCccHHHHHHHHHHHHHHHHHHHhcc
Confidence                    10    469999999864433211        111         22355789999999999999988775  


Q ss_pred             -CceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE
Q 035985          143 -NIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY  219 (293)
Q Consensus       143 -~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y  219 (293)
                       ++++++++|+.+.++....                                ..+++.+|+|+.++.++....  ..|.|
T Consensus       193 ~gi~v~~v~Pg~v~t~~~~~--------------------------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~  240 (250)
T 1yo6_A          193 DNVLVVNFCPGWVQTNLGGK--------------------------------NAALTVEQSTAELISSFNKLDNSHNGRF  240 (250)
T ss_dssp             GTCEEEEEECCCC---------------------------------------------HHHHHHHHHHHTTCCGGGTTCE
T ss_pred             CCeEEEEEcCCceecCCCCC--------------------------------CCCCCHHHHHHHHHHHHhcccccCCCeE
Confidence             8999999999987653210                                124678999999999998654  34666


Q ss_pred             E-EeccCCC
Q 035985          220 I-CCAVNTS  227 (293)
Q Consensus       220 ~-~~~~~~t  227 (293)
                      + +.|..++
T Consensus       241 ~~~~g~~~~  249 (250)
T 1yo6_A          241 FMRNLKPYE  249 (250)
T ss_dssp             EETTEEECC
T ss_pred             EEECCcCCC
Confidence            4 3554443

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.52  E-value=6.5e-14  Score=112.11  Aligned_cols=168  Identities=19%  Similarity=0.129  Sum_probs=117.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCCC------C----CccccchhHHHHHHHHHHHHHhcCC-
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFSS------D----DPETDMIKPAIQGVVNVLKACTKTK-   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~~------~----~~~~~~~~~n~~~~~~l~~~~~~~~-   77 (293)
                      .++.++++|++|++++.++++      ++|+|||+|+......      .    +.. ..++.|+.++.++++++...- 
T Consensus        39 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~  117 (242)
T 1uay_A           39 EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFR-RVLEVNLLGTFNVLRLAAWAMR  117 (242)
T ss_dssp             SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHH-HHHHHHTHHHHHHHHHHHHHHT
T ss_pred             cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHH-HHHHHHhHHHHHHHHHHHHHHH
Confidence            356889999999999988886      7899999999754211      0    223 678899999999999886431 


Q ss_pred             --------CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceE
Q 035985           78 --------TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDL  146 (293)
Q Consensus        78 --------~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~  146 (293)
                              +..+||++||...+.+.                        .+...|+.+|...+.+++.++.+.   ++++
T Consensus       118 ~~~~~~~~~~~~iv~~sS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v  173 (242)
T 1uay_A          118 ENPPDAEGQRGVIVNTASVAAFEGQ------------------------IGQAAYAASKGGVVALTLPAARELAGWGIRV  173 (242)
T ss_dssp             TCCCCTTSCSEEEEEECCTHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             hcCCCCCCCCeEEEEeCChhhccCC------------------------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEE
Confidence                    12399999998744321                        234689999999999998887653   8999


Q ss_pred             EEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEec
Q 035985          147 ITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICCA  223 (293)
Q Consensus       147 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~~  223 (293)
                      +++||+.++++.....    ...+...+..... +           ...+++++|+|++++.++......| .|+++|
T Consensus       174 ~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~~-~-----------~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g  235 (242)
T 1uay_A          174 VTVAPGLFDTPLLQGL----PEKAKASLAAQVP-F-----------PPRLGRPEEYAALVLHILENPMLNGEVVRLDG  235 (242)
T ss_dssp             EEEEECSCSSHHHHTS----CHHHHHHHHTTCC-S-----------SCSCCCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             EEEEeccCcchhhhcc----chhHHHHHHhhCC-C-----------cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcC
Confidence            9999999998753221    1111222221110 0           1347889999999999998754445 567744

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.52  E-value=5e-14  Score=112.95  Aligned_cols=167  Identities=22%  Similarity=0.180  Sum_probs=116.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++.++++|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++...    +
T Consensus        51 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  129 (244)
T 1edo_A           51 GQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWD-EVIDLNLTGVFLCTQAATKIMMKKR  129 (244)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHH-HHHHhhhHHHHHHHHHHHHHHHhcC
Confidence            468899999999998888775       6899999999764211      1122 67889999999998888653    4


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||...+++.+                        +...|+.+|...+.+++.++.+   .+++++++||+.+
T Consensus       130 -~~~iv~~sS~~~~~~~~------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  184 (244)
T 1edo_A          130 -KGRIINIASVVGLIGNI------------------------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFI  184 (244)
T ss_dssp             -CEEEEEECCTHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSB
T ss_pred             -CCEEEEECChhhcCCCC------------------------CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCcc
Confidence             67999999986554321                        2358999999999999888765   4899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---C-CCcEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---A-SGRYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~-~~~y~~~~~  224 (293)
                      +++.....    ............      .       ...+++++|+|++++.++..+.   . +..|+++|.
T Consensus       185 ~t~~~~~~----~~~~~~~~~~~~------~-------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG  241 (244)
T 1edo_A          185 ASDMTAKL----GEDMEKKILGTI------P-------LGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             CSHHHHTT----CHHHHHHHHTSC------T-------TCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred             ccchhhhc----ChHHHHHHhhcC------C-------CCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence            88642211    111111111110      0       2347899999999999884332   2 335666543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.52  E-value=6.2e-14  Score=114.79  Aligned_cols=174  Identities=17%  Similarity=0.215  Sum_probs=118.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      ++.. ..++.|+.++.++++++..    .+
T Consensus        77 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~  155 (280)
T 3pgx_A           77 RKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWD-TVIGVNLTGTWRTLRATVPAMIEAG  155 (280)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHC
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHhhhhHHHHHHHHHHHHHHHhcC
Confidence            478899999999998888765       7999999999764221      1122 6788999999999988743    22


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                      ...+||++||...+.+.                        .....|+.+|...+.+.+.++.+   .|+++.+++|+.+
T Consensus       156 ~~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v  211 (280)
T 3pgx_A          156 NGGSIVVVSSSAGLKAT------------------------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSV  211 (280)
T ss_dssp             SCEEEEEECCGGGTSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             CCCEEEEEcchhhccCC------------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcc
Confidence            23689999998644321                        23458999999999999998876   5899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcc---cccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDF---LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .++.....      .........+.   .+....     ....-+.+++|+|++++.++....  ..| .++++|.
T Consensus       212 ~t~~~~~~------~~~~~~~~~~~~~~~~~~~~-----~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  276 (280)
T 3pgx_A          212 ETPMIEPE------AMMEIFARHPSFVHSFPPMP-----VQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG  276 (280)
T ss_dssp             CSTTCCHH------HHHHHHHHCGGGGGGSCCBT-----TBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTT
T ss_pred             cCcccchh------hhhhhhhcCchhhhhhhhcc-----cCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            98764321      11111111111   010111     111238899999999999887543  334 5677654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.52  E-value=2.8e-14  Score=116.43  Aligned_cols=173  Identities=20%  Similarity=0.137  Sum_probs=117.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcCC-Ccc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKTK-TVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~   80 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++...- +-.
T Consensus        71 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  149 (274)
T 1ja9_A           71 AQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFD-KVFNLNTRGQFFVAQQGLKHCRRGG  149 (274)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHEEEEE
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            468899999999998888876       7999999999754211      1122 678899999999998887541 016


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~  157 (293)
                      +||++||..+++..                       ..+...|+.+|...|.+++.++.+.   +++++++||+.++++
T Consensus       150 ~iv~~sS~~~~~~~-----------------------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~  206 (274)
T 1ja9_A          150 RIILTSSIAAVMTG-----------------------IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTD  206 (274)
T ss_dssp             EEEEECCGGGTCCS-----------------------CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             EEEEEcChHhccCC-----------------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence            99999998744111                       1123589999999999999887764   899999999999876


Q ss_pred             CCCCC----CC----ccH-HHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEecc
Q 035985          158 SLTPD----IP----SSV-ALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICCAV  224 (293)
Q Consensus       158 ~~~~~----~~----~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~~~  224 (293)
                      .....    .+    ... ......+...             .....+++++|+|++++.++..+.   .+..|+++|.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          207 MFDENSWHYAPGGYKGMPQEKIDEGLANM-------------NPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             HHHHHGGGTSTTCCTTCCHHHHHHHHHHT-------------STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             chhcccccccccccccCchHHHHHHHHhc-------------CCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence            32100    00    000 1111111000             013568999999999999987643   2346777553

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.51  E-value=1.8e-13  Score=110.00  Aligned_cols=167  Identities=19%  Similarity=0.168  Sum_probs=112.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc---CCCEEEEecccCCC------CCCCccccchhHHHHHHHHHHHHHh----cCCCccE
Q 035985           15 GELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNF------SSDDPETDMIKPAIQGVVNVLKACT----KTKTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~   81 (293)
                      .++.++.+|+++.+.+.++++   ++|+|||+||....      ...+.. ..++.|+.++.++++++.    +.+ ..+
T Consensus        60 ~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~-~g~  137 (249)
T 3f9i_A           60 DNYTIEVCNLANKEECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFD-KVIDINLKANFILNREAIKKMIQKR-YGR  137 (249)
T ss_dssp             SSEEEEECCTTSHHHHHHHHHTCSCCSEEEECCC-------------CHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEE
T ss_pred             cCccEEEcCCCCHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCC-CcE
Confidence            478999999999999988886   68999999997541      222334 789999999999988774    234 579


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~  158 (293)
                      ||++||..++.+.                        .+...|+.+|...+.+++.++.+   .++++.+++|+.+.++.
T Consensus       138 iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  193 (249)
T 3f9i_A          138 IINISSIVGIAGN------------------------PGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDM  193 (249)
T ss_dssp             EEEECCCCC--CC------------------------SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC---
T ss_pred             EEEEccHHhccCC------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCc
Confidence            9999998644321                        23468999999999999988765   48999999999998765


Q ss_pred             CCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          159 LTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ....    .......+...   .   .       ...+.+++|+|++++.++....  ..| .++++|.
T Consensus       194 ~~~~----~~~~~~~~~~~---~---~-------~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG  245 (249)
T 3f9i_A          194 TDKL----NEKQREAIVQK---I---P-------LGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGG  245 (249)
T ss_dssp             ---C----CHHHHHHHHHH---C---T-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccc----CHHHHHHHHhc---C---C-------CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence            3321    11111111100   0   0       3557889999999999987653  234 5677553

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.51  E-value=5.3e-13  Score=108.99  Aligned_cols=168  Identities=16%  Similarity=0.132  Sum_probs=116.9

Q ss_pred             CCeEEEecCCCCC----cchhhhhc-------CCCEEEEecccCCCCC-C---------------CccccchhHHHHHHH
Q 035985           15 GELKIFRADLTDE----ASFDAPIS-------RSDIVFHVATPVNFSS-D---------------DPETDMIKPAIQGVV   67 (293)
Q Consensus        15 ~~v~~v~~Dl~d~----~~~~~~~~-------~~d~Vih~a~~~~~~~-~---------------~~~~~~~~~n~~~~~   67 (293)
                      .++.++++|++|.    +++.++++       ++|++||+||...... .               +..+..++.|+.++.
T Consensus        62 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~  141 (276)
T 1mxh_A           62 GSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPL  141 (276)
T ss_dssp             TCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHH
T ss_pred             CceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHH
Confidence            4689999999999    87777765       7899999999753211 0               111257889999999


Q ss_pred             HHHHHHhcCC--Cc------cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHH
Q 035985           68 NVLKACTKTK--TV------KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFA  139 (293)
Q Consensus        68 ~l~~~~~~~~--~~------~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~  139 (293)
                      ++++++...-  +.      .+||++||...+.+.                        .+...|+.+|...+.+.+.++
T Consensus       142 ~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~l~~~la  197 (276)
T 1mxh_A          142 FLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL------------------------PGFCVYTMAKHALGGLTRAAA  197 (276)
T ss_dssp             HHHHHHHHTC-------CCCEEEEEECCGGGGSCC------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCCC------------------------CCCeehHHHHHHHHHHHHHHH
Confidence            9999987641  13      799999998644321                        234589999999999999887


Q ss_pred             HhC---CceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--
Q 035985          140 QEN---NIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--  214 (293)
Q Consensus       140 ~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--  214 (293)
                      .+.   |+++++++|+.+.++ .  ...   ......+... .  +.         .+++.+++|+|++++.++....  
T Consensus       198 ~e~~~~gi~v~~v~PG~v~t~-~--~~~---~~~~~~~~~~-~--p~---------~r~~~~~~dva~~v~~l~s~~~~~  259 (276)
T 1mxh_A          198 LELAPRHIRVNAVAPGLSLLP-P--AMP---QETQEEYRRK-V--PL---------GQSEASAAQIADAIAFLVSKDAGY  259 (276)
T ss_dssp             HHHGGGTEEEEEEEESSBSCC-S--SSC---HHHHHHHHTT-C--TT---------TSCCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHhhcCeEEEEEecCcccCC-c--cCC---HHHHHHHHhc-C--CC---------CCCCCCHHHHHHHHHHHhCccccC
Confidence            664   899999999999998 2  111   1122222111 1  10         2347899999999999887543  


Q ss_pred             CCC-cEEEecc
Q 035985          215 ASG-RYICCAV  224 (293)
Q Consensus       215 ~~~-~y~~~~~  224 (293)
                      ..| .++++|.
T Consensus       260 ~tG~~~~vdgG  270 (276)
T 1mxh_A          260 ITGTTLKVDGG  270 (276)
T ss_dssp             CCSCEEEESTT
T ss_pred             ccCcEEEECCc
Confidence            234 5567543

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.51  E-value=1.2e-13  Score=113.05  Aligned_cols=179  Identities=18%  Similarity=0.209  Sum_probs=115.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++.+|++|++++.++++       ++|++||+||......      ++.. ..+++|+.++.++++++    ++.+
T Consensus        76 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~  154 (281)
T 3v2h_A           76 GTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWD-RIIAVNLSSSFHTIRGAIPPMKKKG  154 (281)
T ss_dssp             SCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            578999999999998888775       7899999999764221      1122 67889999999999987    3444


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||...+.+.                        .....|+.+|...+.+++.++.+.   |+++.+++|+.+
T Consensus       155 -~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v  209 (281)
T 3v2h_A          155 -WGRIINIASAHGLVAS------------------------PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYV  209 (281)
T ss_dssp             -CEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CCEEEEECCcccccCC------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCC
Confidence             5799999998644321                        233589999999999999888764   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .++............ ..........-....+    .-...+++++|+|++++.++....  ..| .++++|.
T Consensus       210 ~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG  277 (281)
T 3v2h_A          210 LTPLVEKQIPDQART-RGITEEQVINEVMLKG----QPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGG  277 (281)
T ss_dssp             CC-----------------------------C----CTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTT
T ss_pred             cCcchhhhcchhhhh-cCCCHHHHHHHHHHhc----CCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCC
Confidence            987543211110000 0000000000000010    113568999999999999987653  334 5677543

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.50  E-value=3.2e-13  Score=110.59  Aligned_cols=176  Identities=19%  Similarity=0.187  Sum_probs=118.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      ++.. ..++.|+.++.++++++.    +.+
T Consensus        71 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~  149 (281)
T 3s55_A           71 RRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWD-EVIGTNLTGTFNTIAAVAPGMIKRN  149 (281)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CeEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            578999999999998888775       7999999999764211      1122 678899999999998863    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..++|++||...+.+                        ..+...|+.+|...+.+.+.++.+.   |+++.+++|+.|
T Consensus       150 -~g~iv~isS~~~~~~------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v  204 (281)
T 3s55_A          150 -YGRIVTVSSMLGHSA------------------------NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNI  204 (281)
T ss_dssp             -CEEEEEECCGGGGSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSB
T ss_pred             -CCEEEEECChhhcCC------------------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcc
Confidence             579999999864332                        1234689999999999999998763   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCc-----ccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGND-----FLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +++......  ....+........     ..+....     .....+.+++|+|++++.++....  ..| .++++|
T Consensus       205 ~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg  274 (281)
T 3s55_A          205 ETPMTHNDF--VFGTMRPDLEKPTLKDVESVFASLH-----LQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDA  274 (281)
T ss_dssp             CSTTTSSHH--HHHC-------CCHHHHHHHHHHHC-----SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCccccchh--hhccccccccccchhHHHHHHHhhh-----ccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence            998653210  0000000000000     0000000     112568899999999999987653  234 667744

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.50  E-value=7.1e-14  Score=113.22  Aligned_cols=172  Identities=15%  Similarity=0.075  Sum_probs=117.9

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC----------CCCCccccchhHHHHHHHHHHHHHhcCC-
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF----------SSDDPETDMIKPAIQGVVNVLKACTKTK-   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-   77 (293)
                      ++.++++|++|++++.++++       ++|+|||+||....          ...+.. ..++.|+.++.++++++...- 
T Consensus        59 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~  137 (261)
T 2wyu_A           59 GALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWL-LALEVSAYSLVAVARRAEPLLR  137 (261)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHTTTEE
T ss_pred             CcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHhc
Confidence            47899999999998887775       68999999997531          111122 678899999999999998751 


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      +-.+||++||.....+.                        .+...|+.+|...+.+++.++.+.   |+++++++|+.+
T Consensus       138 ~~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  193 (261)
T 2wyu_A          138 EGGGIVTLTYYASEKVV------------------------PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPV  193 (261)
T ss_dssp             EEEEEEEEECGGGTSBC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC
T ss_pred             cCCEEEEEecccccCCC------------------------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCC
Confidence            02589999997643211                        123589999999999999887764   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec-cCCC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA-VNTS  227 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~-~~~t  227 (293)
                      +++.....  .........+....   +          ...+.+++|+|++++.++....  ..| .++++| ...+
T Consensus       194 ~t~~~~~~--~~~~~~~~~~~~~~---p----------~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          194 RTVAARSI--PGFTKMYDRVAQTA---P----------LRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIM  255 (261)
T ss_dssp             CCTGGGGC--TTHHHHHHHHHHHS---T----------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             cCchhhhc--cccHHHHHHHHhcC---C----------CCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCcccc
Confidence            98753221  11111212111100   0          1236789999999999886533  234 567744 3443

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.50  E-value=1.4e-13  Score=112.22  Aligned_cols=169  Identities=20%  Similarity=0.220  Sum_probs=112.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHhcC----
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACTKT----   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----   76 (293)
                      .++.++.+|++|.+++.++++       ++|+|||+||.....       ..+.. ..++.|+.++.++++++...    
T Consensus        76 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~  154 (272)
T 4e3z_A           76 GEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIE-RMLRVNVTGSILCAAEAVRRMSRL  154 (272)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHCGG
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHH-HHHhhhhHHHHHHHHHHHHHHHHh
Confidence            478999999999998887765       689999999976421       11122 67889999999998877543    


Q ss_pred             --CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEcc
Q 035985           77 --KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIP  151 (293)
Q Consensus        77 --~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~  151 (293)
                        ++..+||++||..++.+..                       .....|+.+|...+.+++.++.+.   |+++++++|
T Consensus       155 ~~~~~g~iv~isS~~~~~~~~-----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  211 (272)
T 4e3z_A          155 YSGQGGAIVNVSSMAAILGSA-----------------------TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRP  211 (272)
T ss_dssp             GTCCCEEEEEECCTHHHHCCT-----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             ccCCCCEEEEEcchHhccCCC-----------------------CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEec
Confidence              1246899999987554322                       123479999999999999887764   899999999


Q ss_pred             CCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          152 SLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       152 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +.+.++.....   ........+..      ...       ...+.+++|+|++++.++....  ..| .|+++|
T Consensus       212 G~v~t~~~~~~---~~~~~~~~~~~------~~~-------~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdg  270 (272)
T 4e3z_A          212 GIIETDLHASG---GLPDRAREMAP------SVP-------MQRAGMPEEVADAILYLLSPSASYVTGSILNVSG  270 (272)
T ss_dssp             CSBC---------------------------CCT-------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcCCccccc---CChHHHHHHhh------cCC-------cCCCcCHHHHHHHHHHHhCCccccccCCEEeecC
Confidence            99988753321   00111111000      000       2346779999999999987543  234 567754

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.50  E-value=1.1e-13  Score=111.93  Aligned_cols=169  Identities=15%  Similarity=0.130  Sum_probs=114.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh-----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT-----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~-----~~   76 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      ++. +..++.|+.++.++++++.     +.
T Consensus        55 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~~n~~g~~~~~~~~~~~~~~~~  133 (257)
T 3imf_A           55 GQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGW-NSVINIVLNGTFYCSQAIGKYWIEKG  133 (257)
T ss_dssp             TCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhhC
Confidence            478999999999998887775       6899999999653211      112 2678899999999998873     33


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh----CCceEEEEccC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE----NNIDLITVIPS  152 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~----~~~~~~ilR~~  152 (293)
                      + ..++|++||.....+.                        .....|+.+|...+.+.+.++.+    .|+++.+++|+
T Consensus       134 ~-~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG  188 (257)
T 3imf_A          134 I-KGNIINMVATYAWDAG------------------------PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPG  188 (257)
T ss_dssp             C-CCEEEEECCGGGGSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             C-CcEEEEECchhhccCC------------------------CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEEC
Confidence            3 5799999998643321                        23458999999999999887743    38999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .+.++....... ....+...+...   +   .       ...+..++|+|++++.++....  ..| .++++|
T Consensus       189 ~v~t~~~~~~~~-~~~~~~~~~~~~---~---p-------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  248 (257)
T 3imf_A          189 PIERTGGADKLW-ISEEMAKRTIQS---V---P-------LGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDG  248 (257)
T ss_dssp             CBSSCCCC--------CCSHHHHTT---S---T-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCCcchhhcc-cCHHHHHHHHhc---C---C-------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            999875432110 000000111110   0   0       2347789999999999987653  234 557744

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.50  E-value=1.2e-13  Score=111.75  Aligned_cols=172  Identities=16%  Similarity=0.129  Sum_probs=117.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC--C-----CCCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF--S-----SDDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~--~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||....  .     ..+.. ..++.|+.++.++++++.    +.
T Consensus        63 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~-~~~~~N~~~~~~~~~~~~~~~~~~  141 (260)
T 2zat_A           63 LSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWD-KILHVNVKATVLMTKAVVPEMEKR  141 (260)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHc
Confidence            468899999999998887765       79999999996431  1     01122 678899999988888764    44


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..+||++||...+.+                        ..+...|+.+|...+.+++.++.+.   |+++++++|+.
T Consensus       142 ~-~g~iv~isS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~  196 (260)
T 2zat_A          142 G-GGSVLIVSSVGAYHP------------------------FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGL  196 (260)
T ss_dssp             T-CEEEEEECCGGGTSC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred             C-CCEEEEEechhhcCC------------------------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECc
Confidence            5 689999999864321                        1234589999999999999887664   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEe-ccCCC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICC-AVNTS  227 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~-~~~~t  227 (293)
                      +.++........  ......+..      ...       ...+.+++|+|++++.++..+.   .+..++++ |...|
T Consensus       197 v~t~~~~~~~~~--~~~~~~~~~------~~~-------~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          197 IKTNFSQVLWMD--KARKEYMKE------SLR-------IRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             BCSSTTHHHHSS--HHHHHHHHH------HHT-------CSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             ccCccchhcccC--hHHHHHHHh------cCC-------CCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence            987642100000  000000000      000       2458899999999999987643   23467774 44444

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.50  E-value=8.1e-14  Score=113.10  Aligned_cols=168  Identities=23%  Similarity=0.211  Sum_probs=116.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCC--CC------CCCccccchhHHHHHHHHHHHHH----hc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVN--FS------SDDPETDMIKPAIQGVVNVLKAC----TK   75 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~--~~------~~~~~~~~~~~n~~~~~~l~~~~----~~   75 (293)
                      .++.++++|++|++++.++++       ++|+|||+||...  ..      ..+.. ..++.|+.++.++++++    ++
T Consensus        57 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~  135 (264)
T 3i4f_A           57 ERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWN-EMIQGNLTAVFHLLKLVVPVMRK  135 (264)
T ss_dssp             GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHH-HHHHhccHHHHHHHHHHHHHHHh
Confidence            478999999999998888775       7899999999421  11      11122 67889999999999988    45


Q ss_pred             CCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccC
Q 035985           76 TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPS  152 (293)
Q Consensus        76 ~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~  152 (293)
                      .+ ..++|++||.+.... .                     ...+...|+.+|...+.+++.++.+   .|+++++++|+
T Consensus       136 ~~-~g~iv~iss~~~~~~-~---------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG  192 (264)
T 3i4f_A          136 QN-FGRIINYGFQGADSA-P---------------------GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPG  192 (264)
T ss_dssp             HT-CEEEEEECCTTGGGC-C---------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             cC-CCeEEEEeechhccc-C---------------------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccC
Confidence            55 679999998742211 1                     1124468999999999999988876   48999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .++++....    ............   .+          ...+.+++|+|++++.++....  ..| +++++|
T Consensus       193 ~v~t~~~~~----~~~~~~~~~~~~---~p----------~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdG  249 (264)
T 3i4f_A          193 DIIGEMKEA----TIQEARQLKEHN---TP----------IGRSGTGEDIARTISFLCEDDSDMITGTIIEVTG  249 (264)
T ss_dssp             CCCGGGGSC----CHHHHHHC---------------------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             CccCccchh----ccHHHHHHHhhc---CC----------CCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcC
Confidence            999875432    222211111110   00          2346789999999999987643  234 567744

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.50  E-value=1.3e-13  Score=112.79  Aligned_cols=180  Identities=23%  Similarity=0.253  Sum_probs=120.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCccccchhHHHHHHHHHHHHHhcC----CCccE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDPETDMIKPAIQGVVNVLKACTKT----KTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~   81 (293)
                      .++.++++|++|++++.++++       ++|++||+||......  +++. ..+++|+.++.++++++...    +...+
T Consensus        74 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~~~g~  152 (278)
T 3sx2_A           74 SRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWH-DVIDVNLTGVYHTIKVAIPTLVKQGTGGS  152 (278)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHCSCEE
T ss_pred             CeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhCCCCcE
Confidence            479999999999998888775       7999999999765322  1233 78899999999999987432    22368


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~  158 (293)
                      ||++||...+.+...                    +..+...|+.+|...+.+++.++.+.   |+++.+++|+.|.++.
T Consensus       153 iv~isS~~~~~~~~~--------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  212 (278)
T 3sx2_A          153 IVLISSSAGLAGVGS--------------------ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPM  212 (278)
T ss_dssp             EEEECCGGGTSCCCC--------------------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTT
T ss_pred             EEEEccHHhcCCCcc--------------------CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCcc
Confidence            999999875443211                    11123579999999999999887664   7999999999999876


Q ss_pred             CCCCCCccHH-HHHHHHh-CCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          159 LTPDIPSSVA-LAATLIT-GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       159 ~~~~~~~~~~-~~~~~~~-~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ....   ... .+..... ........ .     .....+++++|+|++++.++....  ..| .++++|.
T Consensus       213 ~~~~---~~~~~~~~~~~~~~~~~~~~-~-----~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  274 (278)
T 3sx2_A          213 INNE---FTREWLAKMAAATDTPGAMG-N-----AMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAG  274 (278)
T ss_dssp             TSSH---HHHHHHHHHHHHCC--CTTS-C-----SSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             chhh---hHHHHHhhccchhhhhhhhh-h-----hcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCC
Confidence            4321   111 1111111 11110000 1     012568899999999999987543  334 5677553

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.49  E-value=1.6e-13  Score=111.46  Aligned_cols=168  Identities=14%  Similarity=0.056  Sum_probs=116.3

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-----------CCCCccccchhHHHHHHHHHHHHHhcCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-----------SSDDPETDMIKPAIQGVVNVLKACTKTK   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~   77 (293)
                      +..++++|++|++++.++++       ++|+|||+||....           ...+.. ..++.|+.++.++++++...-
T Consensus        60 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~  138 (265)
T 1qsg_A           60 SDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFK-IAHDISSYSFVAMAKACRSML  138 (265)
T ss_dssp             CCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHH-HHHHHHTHHHHHHHHHHGGGE
T ss_pred             CcEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHH-HHHHHHhHHHHHHHHHHHHHh
Confidence            45789999999998887775       68999999997542           111122 688899999999999997652


Q ss_pred             -CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           78 -TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        78 -~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                       +-.+||++||...+.+.                        .+...|+.+|...+.+++.++.+.   |+++++++|+.
T Consensus       139 ~~~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~  194 (265)
T 1qsg_A          139 NPGSALLTLSYLGAERAI------------------------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGP  194 (265)
T ss_dssp             EEEEEEEEEECGGGTSBC------------------------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECC
T ss_pred             ccCCEEEEEcchhhccCC------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCC
Confidence             02589999997643321                        123589999999999999988764   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +.++.....  .........+....   +          ...+.+++|+|++++.++....  ..| .++++|
T Consensus       195 v~t~~~~~~--~~~~~~~~~~~~~~---p----------~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg  252 (265)
T 1qsg_A          195 IRTLAASGI--KDFRKMLAHCEAVT---P----------IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG  252 (265)
T ss_dssp             CCCTTGGGS--TTHHHHHHHHHHHS---T----------TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             Cccchhhcc--cccHHHHHHHHhcC---C----------CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECC
Confidence            998753221  11111222111100   0          1236789999999999987543  234 567754

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.49  E-value=6.1e-13  Score=110.92  Aligned_cols=187  Identities=19%  Similarity=0.209  Sum_probs=117.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++++|++|++++.++++       ++|+|||+||.....      ..+.. ..+++|+.|+.++++++    ++.+
T Consensus        59 ~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~a~lp~m~~~~  137 (324)
T 3u9l_A           59 VDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFA-ELYDINVLSTQRVNRAALPHMRRQK  137 (324)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            478999999999999888876       799999999975321      11122 67899999999999988    5555


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..++|++||.....+..                       .....|+.+|...|.+++.++.+   .|+++++++|+.+
T Consensus       138 -~g~iV~isS~~~~~~~~-----------------------~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v  193 (324)
T 3u9l_A          138 -HGLLIWISSSSSAGGTP-----------------------PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAF  193 (324)
T ss_dssp             -CEEEEEECCGGGTSCCC-----------------------SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC
T ss_pred             -CCEEEEEecchhccCCC-----------------------CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCcc
Confidence             68999999986432211                       12357999999999999998876   5899999999999


Q ss_pred             cCCCCCCC---CCccHHHHHHHHhCCccccc--ccccccccCCCCcceeHHhHHHHHHHhhccCCCC-C-cEEEeccCCC
Q 035985          155 SGPSLTPD---IPSSVALAATLITGNDFLLN--GLKGMQMLSGSISISHVEDVCRAHIFLAEKESAS-G-RYICCAVNTS  227 (293)
Q Consensus       155 ~G~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~-~-~y~~~~~~~t  227 (293)
                      .++.....   .+..................  ......  ....+..+++|+|++++.++..+... . .+.+++....
T Consensus       194 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~  271 (324)
T 3u9l_A          194 TSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFA--AIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDG  271 (324)
T ss_dssp             ---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHH--HTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCS
T ss_pred             ccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHH--HhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchH
Confidence            86543211   11111111111111100000  000000  00112367999999999999877432 2 4455654555


Q ss_pred             H
Q 035985          228 V  228 (293)
Q Consensus       228 ~  228 (293)
                      +
T Consensus       272 ~  272 (324)
T 3u9l_A          272 A  272 (324)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.48  E-value=9.4e-14  Score=112.75  Aligned_cols=175  Identities=17%  Similarity=0.139  Sum_probs=119.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++.++++|++|++++.++++       .+|+|||+||......      .+.. ..++.|+.++.++++++...    +
T Consensus        64 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~  142 (265)
T 1h5q_A           64 VKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFA-FVYDVNVFGVFNTCRAVAKLWLQKQ  142 (265)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHH-HHHhhhhHhHHHHHHHHHHHHHhcC
Confidence            468999999999998887765       4899999999754221      1122 56889999999999887543    2


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      ...+||++||..++.+....        ..         +..+...|+.+|...+.+++.++.+.   +++++++||+.+
T Consensus       143 ~~~~iv~~sS~~~~~~~~~~--------~~---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  205 (265)
T 1h5q_A          143 QKGSIVVTSSMSSQIINQSS--------LN---------GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYV  205 (265)
T ss_dssp             CCEEEEEECCGGGTSCCEEE--------TT---------EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             CCceEEEeCCchhhcccccc--------cc---------ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcc
Confidence            23799999998654432110        00         22345789999999999999887653   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~~~  224 (293)
                      +++.....    .......+....      .       ...+++++|+|++++.++..+.   .+..|+++|.
T Consensus       206 ~t~~~~~~----~~~~~~~~~~~~------~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  261 (265)
T 1h5q_A          206 NTDQTAHM----DKKIRDHQASNI------P-------LNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  261 (265)
T ss_dssp             CCGGGGGS----CHHHHHHHHHTC------T-------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             cccccccc----chhHHHHHHhcC------c-------ccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence            88753221    111111111110      0       2347889999999999987643   2346677543

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.48  E-value=7.9e-14  Score=112.47  Aligned_cols=171  Identities=13%  Similarity=0.107  Sum_probs=114.8

Q ss_pred             Ce-EEEecCCCCCcchhhhh------cCCCEEEEecccCCCC--CCCc---cccchhHHHHHHHHHHHHH----hcCCCc
Q 035985           16 EL-KIFRADLTDEASFDAPI------SRSDIVFHVATPVNFS--SDDP---ETDMIKPAIQGVVNVLKAC----TKTKTV   79 (293)
Q Consensus        16 ~v-~~v~~Dl~d~~~~~~~~------~~~d~Vih~a~~~~~~--~~~~---~~~~~~~n~~~~~~l~~~~----~~~~~~   79 (293)
                      ++ .++.+|++|++++.+++      .++|+|||+||.....  ....   .+..++.|+.++.++++++    ++.+ .
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~  136 (254)
T 2wsb_A           58 AVAARIVADVTDAEAMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-A  136 (254)
T ss_dssp             GEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            45 88999999999888776      4789999999975421  1111   1267789999977777665    3445 6


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      ++||++||...+.+.                      +..|...|+.+|...|.+++.++.+.   +++++++||+.+++
T Consensus       137 ~~iv~isS~~~~~~~----------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t  194 (254)
T 2wsb_A          137 GAIVNLGSMSGTIVN----------------------RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVAT  194 (254)
T ss_dssp             EEEEEECCGGGTSCC----------------------SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCS
T ss_pred             cEEEEEecchhccCC----------------------CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCc
Confidence            899999998643321                      12234689999999999999887764   89999999999998


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      +...... . .......+....      .       ...+++++|+|++++.++....  ..| .++++|.
T Consensus       195 ~~~~~~~-~-~~~~~~~~~~~~------~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          195 EMTLKMR-E-RPELFETWLDMT------P-------MGRCGEPSEIAAAALFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             HHHHHHH-T-CHHHHHHHHHTS------T-------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhhhccc-c-ChHHHHHHHhcC------C-------CCCCCCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            6421100 0 001111111100      0       2457899999999999887542  334 5566554

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.48  E-value=4e-13  Score=108.78  Aligned_cols=169  Identities=20%  Similarity=0.157  Sum_probs=114.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||.....      ..+.. ..++.|+.++.++++++...    +
T Consensus        57 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~  135 (261)
T 1gee_A           57 GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWN-KVIDTNLTGAFLGSREAIKYFVEND  135 (261)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHhhhHHHHHHHHHHHHHHHhCC
Confidence            468899999999998888775       799999999975421      11122 67889999999888776543    2


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      ...+||++||.....                        +..+...|+.+|...+.+++.++.+.   +++++++||+.+
T Consensus       136 ~~~~iv~isS~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  191 (261)
T 1gee_A          136 IKGTVINMSSVHEKI------------------------PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAI  191 (261)
T ss_dssp             CCCEEEEECCGGGTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred             CCCEEEEeCCHHhcC------------------------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCc
Confidence            146999999976332                        12345689999999999988887653   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +++......  ........+...   .   .       ...+++++|+|++++.++....  ..| .++++|
T Consensus       192 ~t~~~~~~~--~~~~~~~~~~~~---~---~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  248 (261)
T 1gee_A          192 NTPINAEKF--ADPEQRADVESM---I---P-------MGYIGEPEEIAAVAAWLASSEASYVTGITLFADG  248 (261)
T ss_dssp             CSGGGHHHH--HSHHHHHHHHTT---C---T-------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCchhhhcc--cChhHHHHHHhc---C---C-------CCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcC
Confidence            987431100  001111111110   0   0       2347899999999999887532  234 556654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.48  E-value=2.2e-13  Score=110.01  Aligned_cols=171  Identities=16%  Similarity=0.155  Sum_probs=118.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-----CCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-----DDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++.++++|++|++++.++++       ++|++||+||......     .+.. ..++.|+.++.++++++.    +.+ 
T Consensus        61 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~-  138 (256)
T 3gaf_A           61 GKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFE-WAFKLNLFSLFRLSQLAAPHMQKAG-  138 (256)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTT-
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            578999999999998887775       7999999999764221     1122 678899999999999874    444 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..++|++||...+.+                        ..+...|+.+|...+.+.+.++.+.   |+++..++|+.+.
T Consensus       139 ~g~iv~isS~~~~~~------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  194 (256)
T 3gaf_A          139 GGAILNISSMAGENT------------------------NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIK  194 (256)
T ss_dssp             CEEEEEECCGGGTCC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             CcEEEEEcCHHHcCC------------------------CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEcccc
Confidence            579999999864322                        1234689999999999999988764   8999999999987


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec-cCCC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA-VNTS  227 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~-~~~t  227 (293)
                      ++......   .......+....      .       ...+.+++|+|++++.++....  ..| .++++| ...+
T Consensus       195 T~~~~~~~---~~~~~~~~~~~~------p-------~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          195 TDALATVL---TPEIERAMLKHT------P-------LGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             CHHHHHHC---CHHHHHHHHTTC------T-------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             Cchhhhcc---CHHHHHHHHhcC------C-------CCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCcccc
Confidence            75311000   011111111111      0       2457889999999999987543  234 667744 4443

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.48  E-value=3.6e-13  Score=110.53  Aligned_cols=167  Identities=19%  Similarity=0.221  Sum_probs=114.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||......      .+.. ..+++|+.++.++++++.    +.+
T Consensus        93 ~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~  171 (285)
T 2c07_A           93 YESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWE-DVLRTNLNSLFYITQPISKRMINNR  171 (285)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTTHHHHHHHHHHHHHHHHT
T ss_pred             CceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhCC
Confidence            468899999999998888763       6899999999764211      1122 678899999888877765    345


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||...+++.+                        +...|+.+|...+.+++.++.+.   |+++++++|+.+
T Consensus       172 -~~~iv~isS~~~~~~~~------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  226 (285)
T 2c07_A          172 -YGRIINISSIVGLTGNV------------------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFI  226 (285)
T ss_dssp             -CEEEEEECCTHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CCEEEEECChhhccCCC------------------------CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcE
Confidence             68999999986554321                        23589999999999998887653   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .++.....    ...........   .   .       ...+++++|+|++++.++..+.  ..| .++++|.
T Consensus       227 ~t~~~~~~----~~~~~~~~~~~---~---~-------~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG  282 (285)
T 2c07_A          227 SSDMTDKI----SEQIKKNIISN---I---P-------AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG  282 (285)
T ss_dssp             CC-----C----CHHHHHHHHTT---C---T-------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ecCchhhc----CHHHHHHHHhh---C---C-------CCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCC
Confidence            88753221    11111111111   0   0       1347899999999999887643  234 5566543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.48  E-value=1.5e-13  Score=111.27  Aligned_cols=168  Identities=21%  Similarity=0.223  Sum_probs=117.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--C-Cc--cccchhHHHHHHHHHHHHHhcC----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--D-DP--ETDMIKPAIQGVVNVLKACTKT----KT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~-~~--~~~~~~~n~~~~~~l~~~~~~~----~~   78 (293)
                      .++.++++|++|++++.++++       ++|++||+||......  . ..  .+..+++|+.++.++++++...    + 
T Consensus        60 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-  138 (262)
T 3pk0_A           60 GKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-  138 (262)
T ss_dssp             SCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            478999999999998888765       7999999999764221  1 11  1256889999999998887654    5 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..++|++||......                       ...+...|+.+|...+.+.+.++.+   .|+++.+++|+.+.
T Consensus       139 ~g~iv~isS~~~~~~-----------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~  195 (262)
T 3pk0_A          139 SGRVVLTSSITGPIT-----------------------GYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIM  195 (262)
T ss_dssp             SCEEEEECCSBTTTB-----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             CcEEEEEechhhccC-----------------------CCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCc
Confidence            579999999763210                       1123458999999999999998876   58999999999998


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ++......    ......+....   +          ..-+...+|+|++++.++....  ..| .++++|
T Consensus       196 t~~~~~~~----~~~~~~~~~~~---p----------~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG  249 (262)
T 3pk0_A          196 TEGLLENG----EEYIASMARSI---P----------AGALGTPEDIGHLAAFLATKEAGYITGQAIAVDG  249 (262)
T ss_dssp             CHHHHTTC----HHHHHHHHTTS---T----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CccccccC----HHHHHHHHhcC---C----------CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence            86422111    11112211111   0          1336789999999999887543  334 567754

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.48  E-value=2.5e-13  Score=111.04  Aligned_cols=175  Identities=18%  Similarity=0.200  Sum_probs=119.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHhc----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACTK----T   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~   76 (293)
                      .++.++.+|++|++++.++++       ++|++||+||.....       ..+.. ..+++|+.++.++++++..    .
T Consensus        57 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~  135 (280)
T 3tox_A           57 GEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWR-ETLDTNLTSAFLAAKYQVPAIAAL  135 (280)
T ss_dssp             CCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHc
Confidence            578999999999998887775       799999999965311       11122 6789999999999888753    3


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..++|++||...+..                       ...+...|+.+|...+.+++.++.+.   |+++.+++|+.
T Consensus       136 ~-~g~iv~isS~~~~~~-----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~  191 (280)
T 3tox_A          136 G-GGSLTFTSSFVGHTA-----------------------GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGG  191 (280)
T ss_dssp             T-CEEEEEECCSBTTTB-----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECS
T ss_pred             C-CCEEEEEcChhhCcC-----------------------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECC
Confidence            4 469999999763311                       11234689999999999999988764   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEe-ccCCC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICC-AVNTS  227 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~-~~~~t  227 (293)
                      +.++................+.....             ...+.+++|+|++++.++....  ..| .++++ |..++
T Consensus       192 v~T~~~~~~~~~~~~~~~~~~~~~~p-------------~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~  256 (280)
T 3tox_A          192 TDTPANFANLPGAAPETRGFVEGLHA-------------LKRIARPEEIAEAALYLASDGASFVTGAALLADGGASVT  256 (280)
T ss_dssp             BSSTTSGGGSTTCCTHHHHHHHTTST-------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCchhhhhccccCHHHHHHHhccCc-------------cCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCcccc
Confidence            99875432111111111122111110             2346789999999999987643  334 56774 44444

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.48  E-value=2.4e-13  Score=109.61  Aligned_cols=167  Identities=15%  Similarity=0.060  Sum_probs=115.0

Q ss_pred             CCeEEEecCCCCC-cchhhhhc-------CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCC------Ccc
Q 035985           15 GELKIFRADLTDE-ASFDAPIS-------RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTK------TVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~-~~~~~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~   80 (293)
                      .++.++.+|++|+ +++.++++       ++|+|||+||...  ..+.. ..++.|+.++.++++++...-      ...
T Consensus        55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~--~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g  131 (254)
T 1sby_A           55 VNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILD--DHQIE-RTIAINFTGLVNTTTAILDFWDKRKGGPGG  131 (254)
T ss_dssp             SEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCC--TTCHH-HHHHHHTHHHHHHHHHHHHHHCGGGTCCCE
T ss_pred             ceEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccCC--HHHHh-hhheeeehhHHHHHHHHHHHHHHhcCCCCC
Confidence            3688999999998 77777664       7999999999753  23444 889999999999999876321      125


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~  157 (293)
                      +||++||...+.+                        ..+...|+.+|...+.+++.++.+   .++++++++|+.+.++
T Consensus       132 ~iv~isS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~  187 (254)
T 1sby_A          132 IIANICSVTGFNA------------------------IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP  187 (254)
T ss_dssp             EEEEECCGGGTSC------------------------CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred             EEEEECchhhccC------------------------CCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCc
Confidence            8999999864321                        123458999999999999988765   4899999999999876


Q ss_pred             CCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEec
Q 035985          158 SLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCA  223 (293)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~  223 (293)
                      ...... ...       ..........       ....+.+++|+|++++.+++....+..|+++|
T Consensus       188 ~~~~~~-~~~-------~~~~~~~~~~-------~~~~~~~~~dvA~~i~~~~~~~~~G~~~~v~g  238 (254)
T 1sby_A          188 LVHTFN-SWL-------DVEPRVAELL-------LSHPTQTSEQCGQNFVKAIEANKNGAIWKLDL  238 (254)
T ss_dssp             HHHSCC-CGG-------GSCTTHHHHH-------TTSCCEEHHHHHHHHHHHHHHCCTTCEEEEET
T ss_pred             cccccc-hhh-------hhhHHHHHHH-------hcCCCCCHHHHHHHHHHHHHcCCCCCEEEEeC
Confidence            321100 000       0000000000       02345689999999999887554455677754

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.47  E-value=4.3e-13  Score=107.46  Aligned_cols=148  Identities=16%  Similarity=0.118  Sum_probs=110.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++..    .+
T Consensus        58 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  136 (244)
T 2bd0_A           58 ALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFD-YTMNTNLKGTFFLTQALFALMERQH  136 (244)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CeeeEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhCC
Confidence            468899999999998888775       6999999999754211      1122 6788999999999988743    34


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||..++.+                        ..+...|+.+|...+.+++.++.+   .|++++++||+.+
T Consensus       137 -~~~iv~isS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  191 (244)
T 2bd0_A          137 -SGHIFFITSVAATKA------------------------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAV  191 (244)
T ss_dssp             -CEEEEEECCGGGTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCB
T ss_pred             -CCEEEEEecchhcCC------------------------CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCc
Confidence             679999999864321                        123468999999999999887653   4899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      +++......            . ..             ...+++++|+|++++.++..+.
T Consensus       192 ~t~~~~~~~------------~-~~-------------~~~~~~~~dva~~~~~l~~~~~  225 (244)
T 2bd0_A          192 YTPMWGKVD------------D-EM-------------QALMMMPEDIAAPVVQAYLQPS  225 (244)
T ss_dssp             CSTTTCCCC------------S-TT-------------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             cchhhhhcc------------c-cc-------------cccCCCHHHHHHHHHHHHhCCc
Confidence            998543210            0 00             1246889999999999998653

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.47  E-value=1.2e-13  Score=111.87  Aligned_cols=175  Identities=17%  Similarity=0.153  Sum_probs=109.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHhcCC---
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACTKTK---   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---   77 (293)
                      .++.++.+|++|.+++.++++       ++|++||+||.....       .++.. ..++.|+.++.++++++...-   
T Consensus        55 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~  133 (261)
T 3n74_A           55 DAALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFD-RIVGVNVRGVYLMTSKLIPHFKEN  133 (261)
T ss_dssp             TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhc
Confidence            478999999999998887775       689999999975411       11122 578899999988888775331   


Q ss_pred             ----CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEc
Q 035985           78 ----TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVI  150 (293)
Q Consensus        78 ----~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR  150 (293)
                          ...++|++||.....+                        ......|+.+|...+.+++.++.+   .++++..++
T Consensus       134 ~~~~~~~~iv~isS~~~~~~------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~  189 (261)
T 3n74_A          134 GAKGQECVILNVASTGAGRP------------------------RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALN  189 (261)
T ss_dssp             HHTTCCEEEEEECCTTTTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             CCCCCCeEEEEeCchhhcCC------------------------CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEe
Confidence                1247999999864321                        123357999999999999998876   489999999


Q ss_pred             cCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEe-ccCC
Q 035985          151 PSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICC-AVNT  226 (293)
Q Consensus       151 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~-~~~~  226 (293)
                      |+.+.++................+..      .       .....+++++|+|++++.++....  ..| .++++ |..+
T Consensus       190 PG~v~t~~~~~~~~~~~~~~~~~~~~------~-------~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~  256 (261)
T 3n74_A          190 PVAGETPLLTTFMGEDSEEIRKKFRD------S-------IPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSI  256 (261)
T ss_dssp             EC--------------------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC
T ss_pred             cCcccChhhhhhcccCcHHHHHHHhh------c-------CCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCccc
Confidence            99998775332110000000010000      0       002457899999999999886543  334 55774 4444


Q ss_pred             C
Q 035985          227 S  227 (293)
Q Consensus       227 t  227 (293)
                      +
T Consensus       257 ~  257 (261)
T 3n74_A          257 G  257 (261)
T ss_dssp             -
T ss_pred             C
Confidence            3

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.47  E-value=4.9e-13  Score=109.71  Aligned_cols=168  Identities=11%  Similarity=0.029  Sum_probs=115.6

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC----------CCCCccccchhHHHHHHHHHHHHHhcCC-
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF----------SSDDPETDMIKPAIQGVVNVLKACTKTK-   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-   77 (293)
                      ++.++.+|++|++++.++++       ++|+|||+||....          ...+. +..+++|+.++.++++++...- 
T Consensus        72 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~  150 (285)
T 2p91_A           72 SDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGF-KIAMDISVYSLIALTRELLPLME  150 (285)
T ss_dssp             CCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHH-HHHHHHHTHHHHHHHHHHGGGGT
T ss_pred             CeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHH
Confidence            47889999999998887765       68999999997532          01112 2678899999999999987652 


Q ss_pred             -CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           78 -TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        78 -~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                       +..+||++||.....+.                        .+...|+.+|...+.+++.++.+.   |+++++++|+.
T Consensus       151 ~~~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~  206 (285)
T 2p91_A          151 GRNGAIVTLSYYGAEKVV------------------------PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGP  206 (285)
T ss_dssp             TSCCEEEEEECGGGTSBC------------------------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred             HcCCEEEEEccchhccCC------------------------CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCc
Confidence             13699999997643321                        123589999999999999887663   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +.++.....  .........+...   .+          ...+.+++|+|++++.++....  ..| .++++|
T Consensus       207 v~t~~~~~~--~~~~~~~~~~~~~---~p----------~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg  264 (285)
T 2p91_A          207 VKTLAAYSI--TGFHLLMEHTTKV---NP----------FGKPITIEDVGDTAVFLCSDWARAITGEVVHVDN  264 (285)
T ss_dssp             CCCSCC--C--TTHHHHHHHHHHH---ST----------TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             ccCchhhcc--cchHHHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence            998764321  1111222211110   00          1235789999999999987533  234 566754

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.47  E-value=4.3e-13  Score=107.75  Aligned_cols=166  Identities=18%  Similarity=0.170  Sum_probs=117.0

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~   78 (293)
                      ++..+++|++|++++.++++       ++|++||+||.....      .++.. ..++.|+.++.++++++..    .+ 
T Consensus        56 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~m~~~~-  133 (248)
T 3op4_A           56 NGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWS-DIMETNLTSIFRLSKAVLRGMMKKR-  133 (248)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             cceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC-
Confidence            57889999999998888775       799999999976422      11222 6788999999999988753    34 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..++|++||.....+.                        .+...|+.+|...+.+.+.++.+.   |+++.+++|+.+.
T Consensus       134 ~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~  189 (248)
T 3op4_A          134 QGRIINVGSVVGTMGN------------------------AGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIE  189 (248)
T ss_dssp             CEEEEEECCHHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred             CCEEEEEcchhhcCCC------------------------CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCC
Confidence            5799999998754422                        234589999999999999887653   8999999999998


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .+.....    ............      .       ...+.+++|+|++++.++....  ..| .++++|.
T Consensus       190 T~~~~~~----~~~~~~~~~~~~------p-------~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG  244 (248)
T 3op4_A          190 TDMTKAL----NDEQRTATLAQV------P-------AGRLGDPREIASAVAFLASPEAAYITGETLHVNGG  244 (248)
T ss_dssp             STTTTTS----CHHHHHHHHHTC------T-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             Cchhhhc----CHHHHHHHHhcC------C-------CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence            7653321    111111111110      0       2447789999999999887543  234 5577553

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.46  E-value=4e-13  Score=108.09  Aligned_cols=173  Identities=17%  Similarity=0.154  Sum_probs=108.0

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~   78 (293)
                      ++.++.+|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++    ++.+ 
T Consensus        47 ~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~m~~~~-  124 (250)
T 2fwm_X           47 PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQ-QTFAVNVGGAFNLFQQTMNQFRRQR-  124 (250)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             CceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHH-HHHHHccHHHHHHHHHHHHHHHhcC-
Confidence            37889999999998888775       7999999999754211      1122 67889999999999888    3445 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..+||++||...+.+                        ..+...|+.+|...+.+.+.++.+.   |+++++++|+.++
T Consensus       125 ~g~iv~isS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  180 (250)
T 2fwm_X          125 GGAIVTVASDAAHTP------------------------RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTD  180 (250)
T ss_dssp             CCEEEEECCGGGTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred             CCEEEEECchhhCCC------------------------CCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCccc
Confidence            679999999864321                        1234689999999999999887663   8999999999999


Q ss_pred             CCCCCCCCCccHHHHHH-HHhCCccccc-ccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAAT-LITGNDFLLN-GLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ++........  ..... .+........ ...       ...+.+.+|+|++++.++..+.  ..| .+.++|
T Consensus       181 t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p-------~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  244 (250)
T 2fwm_X          181 TDMQRTLWVS--DDAEEQRIRGFGEQFKLGIP-------LGKIARPQEIANTILFLASDLASHITLQDIVVDG  244 (250)
T ss_dssp             --------------------------------------------CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CccccccccC--hhHHHHHHhhhhhcccccCC-------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            8753221000  00000 0000000000 000       1236789999999999987643  334 556654

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.46  E-value=4.7e-13  Score=108.14  Aligned_cols=168  Identities=13%  Similarity=0.064  Sum_probs=117.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      .+.. ..+++|+.++.++++++    ++.+
T Consensus        54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~m~~~~  132 (258)
T 3oid_A           54 VKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWD-WTMNINAKALLFCAQEAAKLMEKNG  132 (258)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHTTT
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            478999999999998887765       5799999998643211      1122 57889999999998887    3444


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||...+.+                        ..+...|+.+|...+.+.+.++.+.   ++++.+++|+.+
T Consensus       133 -~g~iv~isS~~~~~~------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v  187 (258)
T 3oid_A          133 -GGHIVSISSLGSIRY------------------------LENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAI  187 (258)
T ss_dssp             -CEEEEEEEEGGGTSB------------------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCB
T ss_pred             -CcEEEEECchhhCCC------------------------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCC
Confidence             579999999864322                        1234689999999999999998775   799999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ..+...... . ...........   .+          ...+.+++|+|++++.++....  ..| .++++|
T Consensus       188 ~T~~~~~~~-~-~~~~~~~~~~~---~p----------~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdG  244 (258)
T 3oid_A          188 DTDALKHFP-N-REDLLEDARQN---TP----------AGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDG  244 (258)
T ss_dssp             CSGGGGGCT-T-HHHHHHHHHHH---CT----------TSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEEST
T ss_pred             cChhhhhcc-c-CHHHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECC
Confidence            876432211 0 11111111110   00          2447889999999999987643  234 567754

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.46  E-value=3.7e-13  Score=110.57  Aligned_cols=184  Identities=19%  Similarity=0.225  Sum_probs=122.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC----CCCccccchhHHHHHHHHHHHHHhcCC-CccEE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS----SDDPETDMIKPAIQGVVNVLKACTKTK-TVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~   82 (293)
                      .++.++++|++|++++.++++       ++|++||+||.....    .+++. ..+++|+.++.++++++...- +..++
T Consensus        71 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~g~i  149 (287)
T 3pxx_A           71 RKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFA-DAFDVDFVGVINTVHAALPYLTSGASI  149 (287)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHH-HHHHHHTHHHHHHHHHHGGGCCTTCEE
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHH-HHhhhhhhhhHHHHHHHHHHhhcCcEE
Confidence            578999999999998887775       799999999986432    11223 788999999999999987652 13589


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSL  159 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~  159 (293)
                      |++||...+.+...    .+..+..         +..+...|+.+|...+.+.+.++.+.   |+++.+++|+.|.++..
T Consensus       150 v~isS~~~~~~~~~----~~~~~~~---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  216 (287)
T 3pxx_A          150 ITTGSVAGLIAAAQ----PPGAGGP---------QGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDML  216 (287)
T ss_dssp             EEECCHHHHHHHHC----CC--------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTT
T ss_pred             EEeccchhcccccc----ccccccc---------CCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccc
Confidence            99999875544322    1222222         11234589999999999999988765   89999999999988754


Q ss_pred             CCCCCccHHHHHHHHhCC---c------ccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          160 TPDIPSSVALAATLITGN---D------FLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~---~------~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ...     .. .......   .      ..+....     .....+.+++|+|++++.++....  ..| .++++|
T Consensus       217 ~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdG  281 (287)
T 3pxx_A          217 NSA-----PM-YRQFRPDLEAPSRADALLAFPAMQ-----AMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDA  281 (287)
T ss_dssp             SSH-----HH-HHHHCTTSSSCCHHHHHHHGGGGC-----SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccc-----ch-hhhhccccccchhHHHHhhhhhhc-----ccCCCCCCHHHHHhhHheecchhhcCCCCceEeECc
Confidence            320     00 0111000   0      0000000     112568899999999999987543  334 567744

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.46  E-value=6.3e-13  Score=107.55  Aligned_cols=160  Identities=18%  Similarity=0.218  Sum_probs=113.8

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHH----hcCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKAC----TKTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~   78 (293)
                      ++.++++|++|++++.++++       ++|+|||+||.....      ..+.. ..++.|+.++.++++++    ++.+ 
T Consensus        54 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-  131 (260)
T 1nff_A           54 AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQ-RILDVNLTGVFLGIRAVVKPMKEAG-  131 (260)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             CceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            47889999999999888876       799999999975421      11122 67889999997666554    4445 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..+||++||...+.+.                        .+...|+.+|...+.+++.++.+   .|++++++||+.++
T Consensus       132 ~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  187 (260)
T 1nff_A          132 RGSIINISSIEGLAGT------------------------VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVK  187 (260)
T ss_dssp             CEEEEEECCGGGTSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             CCEEEEEeehhhcCCC------------------------CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCC
Confidence            6899999998744321                        13358999999999999988766   48999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--C-CCcEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--A-SGRYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~-~~~y~~~~  223 (293)
                      ++....  .           ...  +....       ...+.+++|+|++++.++....  . +..|+++|
T Consensus       188 t~~~~~--~-----------~~~--~~~~~-------~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~g  236 (260)
T 1nff_A          188 TPMTDW--V-----------PED--IFQTA-------LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDG  236 (260)
T ss_dssp             SGGGTT--S-----------CTT--CSCCS-------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcccc--c-----------hhh--HHhCc-------cCCCCCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence            875320  0           000  00001       2347889999999999887543  2 33567754

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.46  E-value=1.8e-13  Score=110.53  Aligned_cols=173  Identities=16%  Similarity=0.152  Sum_probs=115.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||.....      ..+.. ..++.|+.++.++++++    ++.+
T Consensus        51 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~~~~~~~~~~~~~~  129 (255)
T 2q2v_A           51 VKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWD-KIIALNLSAVFHGTRLALPGMRARN  129 (255)
T ss_dssp             CCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            468889999999999988876       799999999975421      11122 67889999777766654    5556


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||...+.+.                        .+...|+.+|...+.+.+.++.+.   |+++++++|+.+
T Consensus       130 -~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  184 (255)
T 2q2v_A          130 -WGRIINIASVHGLVGS------------------------TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWV  184 (255)
T ss_dssp             -CEEEEEECCGGGTSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSB
T ss_pred             -CcEEEEEcCchhccCC------------------------CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCC
Confidence             6899999998643321                        123589999999999999988764   799999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCc----ccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGND----FLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +++....    ..... ....+..    ..+.. .+    .....+++++|+|++++.++..+.  ..| .++++|
T Consensus       185 ~t~~~~~----~~~~~-~~~~~~~~~~~~~~~~-~~----~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg  250 (255)
T 2q2v_A          185 LTPLVQK----QIDDR-AANGGDPLQAQHDLLA-EK----QPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDG  250 (255)
T ss_dssp             CCHHHHH----HHHHH-HHHTCCHHHHHHHHHT-TT----CTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             cCcchhh----hcccc-cccccchHHHHHHHHh-cc----CCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECC
Confidence            8864210    00000 0000000    00000 00    012458999999999999887543  234 567754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.46  E-value=3.7e-13  Score=108.30  Aligned_cols=168  Identities=19%  Similarity=0.225  Sum_probs=113.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCc---cccchhHHHHHHHHHHHHH----hcCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDP---ETDMIKPAIQGVVNVLKAC----TKTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~---~~~~~~~n~~~~~~l~~~~----~~~~~   78 (293)
                      .++.++.+|++|++++.++++       .+|+|||+||......  ...   .+..++.|+.++..+++++    ++.+ 
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-  132 (251)
T 1zk4_A           54 DQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-  132 (251)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-
Confidence            478999999999998887775       4899999999754211  111   1267889999877665554    4555 


Q ss_pred             c-cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH-----hCCceEEEEccC
Q 035985           79 V-KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ-----ENNIDLITVIPS  152 (293)
Q Consensus        79 ~-~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~-----~~~~~~~ilR~~  152 (293)
                      . .+||++||...+.+.                        .+...|+.+|...|.+++.++.     ..+++++++||+
T Consensus       133 ~~~~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg  188 (251)
T 1zk4_A          133 LGASIINMSSIEGFVGD------------------------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPG  188 (251)
T ss_dssp             SCEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEEC
T ss_pred             CCCEEEEeCCchhccCC------------------------CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeC
Confidence            5 799999998644321                        2345899999999999988765     458999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .++++..... ..  ......+ ...  .   .       ...+++++|+|++++.++....  ..| .++++|
T Consensus       189 ~v~t~~~~~~-~~--~~~~~~~-~~~--~---~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  246 (251)
T 1zk4_A          189 YIKTPLVDDL-PG--AEEAMSQ-RTK--T---P-------MGHIGEPNDIAYICVYLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             CBCCHHHHTS-TT--HHHHHTS-TTT--C---T-------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCcchhhhhc-Cc--hhhhHHH-hhc--C---C-------CCCCcCHHHHHHHHHHHcCcccccccCcEEEECC
Confidence            9998743211 00  0000100 000  0   0       2347899999999999987643  234 556654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.46  E-value=1.7e-12  Score=105.48  Aligned_cols=166  Identities=17%  Similarity=0.157  Sum_probs=118.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh-----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT-----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~-----~~   76 (293)
                      .++.++.+|++|++++.++++       .+|+|||+||......      ++.. ..++.|+.++.++++++.     +.
T Consensus        76 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~  154 (267)
T 4iiu_A           76 GNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWD-AVIHTNLDSFYNVIQPCIMPMIGAR  154 (267)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            578999999999998888775       7999999999764221      1222 678899999999998873     34


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..+||++||...+.+.                        .+...|+.+|...+.+.+.++.+.   |+++.+++|+.
T Consensus       155 ~-~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~  209 (267)
T 4iiu_A          155 Q-GGRIITLSSVSGVMGN------------------------RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGL  209 (267)
T ss_dssp             S-CEEEEEECCHHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred             C-CcEEEEEcchHhccCC------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEee
Confidence            4 5799999998755432                        234589999999998888877654   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      +.++.....    ...........+              ...+..++|+|++++.++....  ..| .++++|.
T Consensus       210 v~t~~~~~~----~~~~~~~~~~~p--------------~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          210 IDTGMIEME----ESALKEAMSMIP--------------MKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             BCSTTCCCC----HHHHHHHHHTCT--------------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ecCCccccc----HHHHHHHHhcCC--------------CCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence            988754321    111112111111              2346789999999999887543  334 5566554

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.46  E-value=1.2e-12  Score=105.12  Aligned_cols=166  Identities=20%  Similarity=0.218  Sum_probs=117.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++++|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++..    .+
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  132 (247)
T 3lyl_A           54 FKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQ-SVINTNLSSIFRMSKECVRGMMKKR  132 (247)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            478999999999998887765       5899999999764221      1122 6788999999999887753    33


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||.....+.                        .....|+.+|...+.+++.++.+   .++++.+++|+.+
T Consensus       133 -~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v  187 (247)
T 3lyl_A          133 -WGRIISIGSVVGSAGN------------------------PGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFI  187 (247)
T ss_dssp             -CEEEEEECCTHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CeEEEEEcchhhccCC------------------------CCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcE
Confidence             4699999998654322                        23458999999999999888775   3899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ..+.....    .......+....      .       ...+.+++|+|++++.++....  ..| .++++|
T Consensus       188 ~t~~~~~~----~~~~~~~~~~~~------~-------~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  242 (247)
T 3lyl_A          188 ATDMTDKL----TDEQKSFIATKI------P-------SGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNG  242 (247)
T ss_dssp             CCTTTTTS----CHHHHHHHHTTS------T-------TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ecccchhc----cHHHHHHHhhcC------C-------CCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECC
Confidence            87754321    111112111111      0       3457899999999999887543  234 567754

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.45  E-value=4.8e-13  Score=109.27  Aligned_cols=175  Identities=15%  Similarity=0.101  Sum_probs=116.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC-----
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT-----   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~-----   76 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++...     
T Consensus        71 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~m~~  149 (277)
T 2rhc_B           71 VEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWL-DVVETNLTGVFRVTKQVLKAGGMLE  149 (277)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHTTTCHHH
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHhChhhHhh
Confidence            468899999999998887765       6899999999754211      1122 67889999999999987765     


Q ss_pred             -CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccC
Q 035985           77 -KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPS  152 (293)
Q Consensus        77 -~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~  152 (293)
                       + ..+||++||....++.                        .+...|+.+|...+.+.+.++.+   .|+++++++|+
T Consensus       150 ~~-~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG  204 (277)
T 2rhc_B          150 RG-TGRIVNIASTGGKQGV------------------------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPG  204 (277)
T ss_dssp             HT-EEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEC
T ss_pred             cC-CeEEEEECccccccCC------------------------CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecC
Confidence             4 6799999998644321                        23358999999999999988765   37999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHh---CCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          153 LMSGPSLTPDIPSSVALAATLIT---GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .+.++....    ..........   ...... ...+    .....+++++|+|++++.++..+.  ..| .++++|.
T Consensus       205 ~v~t~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~----~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          205 FVETPMAAS----VREHYSDIWEVSTEEAFDR-ITAR----VPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             SBCSHHHHH----HHHHHHHHHTCCHHHHHHH-HHHH----STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCcCchhhh----hhhhcccccccchHHHHHH-HHhc----CCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            998753110    0000000000   000000 0000    002458899999999999887643  234 5677554

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.45  E-value=6.6e-13  Score=107.47  Aligned_cols=170  Identities=14%  Similarity=0.116  Sum_probs=115.2

Q ss_pred             CCeEEEecCCCCCcchhhhh--------cCCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPI--------SRSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~--------~~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .++.++++|++|++++.+++        .++|++||+||.....      ..+.. ..++.|+.++.++++++.    +.
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~  136 (260)
T 2ae2_A           58 FKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYS-LIMSINFEAAYHLSVLAHPFLKAS  136 (260)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhc
Confidence            46889999999999888776        4699999999975321      11122 678899999999998884    44


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..+||++||...+.+.                        .+...|+.+|...+.+++.++.+.   ++++++++|+.
T Consensus       137 ~-~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~  191 (260)
T 2ae2_A          137 E-RGNVVFISSVSGALAV------------------------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGV  191 (260)
T ss_dssp             S-SEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECS
T ss_pred             C-CcEEEEEcchhhccCC------------------------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCC
Confidence            5 6899999998643211                        233589999999999999988765   89999999999


Q ss_pred             ccCCCCCCCCCc-cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPS-SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +.++........ ........+...   .   .       ...+++++|+|++++.++....  ..| .++++|
T Consensus       192 v~t~~~~~~~~~~~~~~~~~~~~~~---~---~-------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg  252 (260)
T 2ae2_A          192 IATSLVEMTIQDPEQKENLNKLIDR---C---A-------LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDG  252 (260)
T ss_dssp             BCSHHHHHHTTSHHHHHHHHHHHHT---S---T-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcchhhhccChhhHHHHHHHHhc---C---C-------CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            977531100000 000000011000   0   0       2347899999999999887542  234 556654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.45  E-value=3.9e-13  Score=108.81  Aligned_cols=177  Identities=17%  Similarity=0.142  Sum_probs=113.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++.+|++|++++.++++       ++|++||+||.....      ..+.. ..++.|+.++.++++++.    +.+
T Consensus        55 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~  133 (260)
T 1x1t_A           55 VKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWD-AILALNLSAVFHGTAAALPHMKKQG  133 (260)
T ss_dssp             SCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            468899999999998887775       699999999975421      11122 678899999999888774    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||...+.+.                        .+...|+.+|...+.+++.++.+.   |+++++++|+.+
T Consensus       134 -~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  188 (260)
T 1x1t_A          134 -FGRIINIASAHGLVAS------------------------ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWV  188 (260)
T ss_dssp             -CEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCB
T ss_pred             -CCEEEEECcHHhCcCC------------------------CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCc
Confidence             5799999998644321                        234589999999999999887663   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCc-ccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGND-FLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .++............ ........ ..+. ...    .-...+.+++|+|++++.++....  ..| .++++|
T Consensus       189 ~t~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~----~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdg  255 (260)
T 1x1t_A          189 RTPLVEKQISALAEK-NGVDQETAARELL-SEK----QPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             CC-------------------------CH-HHH----CTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCchHHHhhhhhccc-cCCchHHHHHHHh-hcc----CCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence            887532211000000 00000000 0000 000    002357899999999999987542  334 556654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.45  E-value=5.7e-13  Score=108.11  Aligned_cols=167  Identities=19%  Similarity=0.190  Sum_probs=115.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------------CCccccchhHHHHHHHHHHHHHhc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------------DDPETDMIKPAIQGVVNVLKACTK   75 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------------~~~~~~~~~~n~~~~~~l~~~~~~   75 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||......            .+.. ..++.|+.++.++++++..
T Consensus        58 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~  136 (265)
T 2o23_A           58 NNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQ-RVLDVNLMGTFNVIRLVAG  136 (265)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHH-HHHHHHTHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHH-HHHHHHhHHHHHHHHHHHH
Confidence            468999999999999888876       7999999999754211            1122 6788999999999988764


Q ss_pred             C----------CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---C
Q 035985           76 T----------KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---N  142 (293)
Q Consensus        76 ~----------~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~  142 (293)
                      .          + ..+||++||...+.+.                        .+...|+.+|...+.+++.++.+   .
T Consensus       137 ~~~~~~~~~~~~-~~~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~  191 (265)
T 2o23_A          137 EMGQNEPDQGGQ-RGVIINTASVAAFEGQ------------------------VGQAAYSASKGGIVGMTLPIARDLAPI  191 (265)
T ss_dssp             HHTTSCCCTTSC-CEEEEEECCTHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             HHHhcccccCCC-CcEEEEeCChhhcCCC------------------------CCCchhHHHHHHHHHHHHHHHHHHhhc
Confidence            3          4 5799999998644321                        23458999999999999888765   3


Q ss_pred             CceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEE
Q 035985          143 NIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYIC  221 (293)
Q Consensus       143 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~  221 (293)
                      ++++++++|+.+.++......    ......+...   ++.         ...+++++|+|++++.++++....| .+.+
T Consensus       192 gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~---~~~---------~~~~~~~~dva~~~~~l~~~~~~~G~~i~v  255 (265)
T 2o23_A          192 GIRVMTIAPGLFGTPLLTSLP----EKVCNFLASQ---VPF---------PSRLGDPAEYAHLVQAIIENPFLNGEVIRL  255 (265)
T ss_dssp             TEEEEEEEECCBCCC--------------CHHHHT---CSS---------SCSCBCHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred             CcEEEEEEeccccCccccccC----HHHHHHHHHc---CCC---------cCCCCCHHHHHHHHHHHhhcCccCceEEEE
Confidence            899999999999876432110    0000000000   000         1236789999999999987665555 5566


Q ss_pred             ec
Q 035985          222 CA  223 (293)
Q Consensus       222 ~~  223 (293)
                      +|
T Consensus       256 dg  257 (265)
T 2o23_A          256 DG  257 (265)
T ss_dssp             ST
T ss_pred             CC
Confidence            44

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.45  E-value=4.2e-13  Score=109.55  Aligned_cols=171  Identities=18%  Similarity=0.170  Sum_probs=114.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CC---ccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DD---PETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~---~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++.++++|++|++++.++++       ++|++||+||......  ..   ..+..+++|+.++.++++++.    +.+ 
T Consensus        73 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-  151 (277)
T 4dqx_A           73 SKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-  151 (277)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-
Confidence            478999999999998887775       7899999999753211  11   112577799999998888774    444 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..+||++||...+.+                        ..+...|+.+|...+.+++.++.+.   |+++.+++|+.+.
T Consensus       152 ~g~iv~isS~~~~~~------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  207 (277)
T 4dqx_A          152 GGSIINTTSYTATSA------------------------IADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTID  207 (277)
T ss_dssp             CEEEEEECCGGGTSC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CcEEEEECchhhCcC------------------------CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCc
Confidence            579999999864322                        1234689999999999999887664   8999999999987


Q ss_pred             CCCCCCC--CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPD--IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ++.....  ................             -...+.+++|+|++++.++....  ..| .++++|
T Consensus       208 T~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  267 (277)
T 4dqx_A          208 SPYFTKIFAEAKDPAKLRSDFNARA-------------VMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDG  267 (277)
T ss_dssp             CHHHHHHHHTCSCHHHHHHHHHTTS-------------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             CchhhhhcccccchhHHHHHHHhcC-------------cccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECC
Confidence            6520000  0000000000011100             02447789999999999987543  234 567754

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.44  E-value=1e-12  Score=106.85  Aligned_cols=163  Identities=21%  Similarity=0.216  Sum_probs=116.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      ++.. ..+++|+.++.++++++.    +.+
T Consensus        78 ~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~  156 (269)
T 4dmm_A           78 GEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQ-SVLDLNLGGVFLCSRAAAKIMLKQR  156 (269)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            478999999999998888775       7899999999764221      1222 678899999999998874    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||.....+.+                        ....|+.+|...+.+.+.++.+   .|+++.+++|+.|
T Consensus       157 -~g~iv~isS~~~~~~~~------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v  211 (269)
T 4dmm_A          157 -SGRIINIASVVGEMGNP------------------------GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFI  211 (269)
T ss_dssp             -CCEEEEECCHHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred             -CcEEEEECchhhcCCCC------------------------CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCC
Confidence             57999999987544322                        2358999999999999888775   3899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~-~y~~~~  223 (293)
                      .++....     .  ....... .  .   .       ...+.+.+|+|++++.++..+.   ..| .++++|
T Consensus       212 ~T~~~~~-----~--~~~~~~~-~--~---p-------~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdG  264 (269)
T 4dmm_A          212 ATDMTSE-----L--AAEKLLE-V--I---P-------LGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDG  264 (269)
T ss_dssp             TTSCSCH-----H--HHHHHGG-G--C---T-------TSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEEST
T ss_pred             cCccccc-----c--cHHHHHh-c--C---C-------CCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECC
Confidence            8765321     1  1111111 0  0   0       2346789999999999987632   234 567754

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.44  E-value=8.1e-13  Score=107.11  Aligned_cols=166  Identities=20%  Similarity=0.143  Sum_probs=115.1

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC----CC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT----KT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~----~~   78 (293)
                      ++.++++|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++...    +.
T Consensus        59 ~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~g~~~~~~~~~~~~~~~~~  137 (263)
T 3ak4_A           59 GGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWD-FNFDVNARGVFLANQIACRHFLASNT  137 (263)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred             CCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence            68899999999999888876       7999999999754211      1122 67889999999998887642    21


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..+||++||.....+.                        .+...|+.+|...+.+++.++.+.   |++++++||+.++
T Consensus       138 ~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  193 (263)
T 3ak4_A          138 KGVIVNTASLAAKVGA------------------------PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVK  193 (263)
T ss_dssp             CCEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBT
T ss_pred             CeEEEEecccccccCC------------------------CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEeccccc
Confidence            4799999997643211                        234589999999999999887664   8999999999998


Q ss_pred             CCCCCCCCCccH-----------HHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEE
Q 035985          156 GPSLTPDIPSSV-----------ALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYIC  221 (293)
Q Consensus       156 G~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~  221 (293)
                      ++....    ..           ......+..      ...       ...+++++|+|++++.++..+.  ..| .+++
T Consensus       194 t~~~~~----~~~~~~~~~~~~~~~~~~~~~~------~~p-------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~v  256 (263)
T 3ak4_A          194 TAMQER----EIIWEAELRGMTPEAVRAEYVS------LTP-------LGRIEEPEDVADVVVFLASDAARFMTGQGINV  256 (263)
T ss_dssp             THHHHH----HHHHHHHHHTSCHHHHHHHHHH------TCT-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             Chhhhh----hccccccccccCcHHHHHHHHh------cCC-------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEE
Confidence            764210    00           000000000      000       2458899999999999987642  234 6677


Q ss_pred             ec
Q 035985          222 CA  223 (293)
Q Consensus       222 ~~  223 (293)
                      +|
T Consensus       257 dg  258 (263)
T 3ak4_A          257 TG  258 (263)
T ss_dssp             SS
T ss_pred             Cc
Confidence            54

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.44  E-value=3e-13  Score=110.19  Aligned_cols=168  Identities=16%  Similarity=0.151  Sum_probs=116.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++.++++|++|.+++.++.+      ++|++||+||......      ++.. ..+++|+.++.++++++.    +.+ 
T Consensus        79 ~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-  156 (273)
T 3uf0_A           79 GSAEAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWR-EVLTVNLDAAWVLSRSFGTAMLAHG-  156 (273)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            468999999999988877653      7999999999764221      1122 678899999999998773    345 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..+||++||...+.+.                        .+...|+.+|...+.+++.++.+   .|+++.+++|+.+.
T Consensus       157 ~g~IV~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  212 (273)
T 3uf0_A          157 SGRIVTIASMLSFQGG------------------------RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVV  212 (273)
T ss_dssp             CEEEEEECCGGGTSCC------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CCEEEEEcchHhcCCC------------------------CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCc
Confidence            5799999998644321                        23458999999999999998876   48999999999998


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ++.......  .......+...   .   .       ...+..++|+|++++.++....  ..| .++++|
T Consensus       213 T~~~~~~~~--~~~~~~~~~~~---~---p-------~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdG  268 (273)
T 3uf0_A          213 TANTAALRA--DDERAAEITAR---I---P-------AGRWATPEDMVGPAVFLASDAASYVHGQVLAVDG  268 (273)
T ss_dssp             SGGGHHHHT--SHHHHHHHHHH---S---T-------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCchhhccc--CHHHHHHHHhc---C---C-------CCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence            864211000  00011111000   0   0       2346789999999999887643  334 557754

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.44  E-value=1.1e-12  Score=105.16  Aligned_cols=166  Identities=17%  Similarity=0.214  Sum_probs=114.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||.....      ..+.. ..++.|+.++.++++++.    +.+
T Consensus        54 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~  132 (246)
T 2uvd_A           54 SDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWD-TVINTNLKGVFLCTKAVSRFMMRQR  132 (246)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            468899999999998888775       799999999975421      11122 678899999777766654    445


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||....++.+                        +...|+.+|...+.+.+.++.+   .|+++++++|+.+
T Consensus       133 -~g~iv~isS~~~~~~~~------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  187 (246)
T 2uvd_A          133 -HGRIVNIASVVGVTGNP------------------------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFI  187 (246)
T ss_dssp             -CEEEEEECCTHHHHCCT------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CcEEEEECCHHhcCCCC------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccc
Confidence             68999999986544321                        2358999999999998887764   3899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .++..........    ..+...   .   .       ...+++++|+|++++.++..+.  ..| .+.++|
T Consensus       188 ~t~~~~~~~~~~~----~~~~~~---~---p-------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg  242 (246)
T 2uvd_A          188 ATDMTDVLDENIK----AEMLKL---I---P-------AAQFGEAQDIANAVTFFASDQSKYITGQTLNVDG  242 (246)
T ss_dssp             GGGCSSCCCTTHH----HHHHHT---C---T-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCcchhhcCHHHH----HHHHhc---C---C-------CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECc
Confidence            8774332111111    111110   0   0       1347889999999999887542  234 556654

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.44  E-value=1.1e-12  Score=106.40  Aligned_cols=168  Identities=17%  Similarity=0.143  Sum_probs=113.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++.++++|++|++++.++++       .+|+|||+||......      .+.. ..++.|+.++.++++++...    +
T Consensus        73 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~  151 (266)
T 3o38_A           73 GRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWD-RVLNVTLTSVMRATRAALRYFRGVD  151 (266)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHTSS
T ss_pred             CceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            479999999999998887765       6899999999754221      1122 67889999999998887643    1


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                      ...+||++||...+.+                        ..+...|+.+|...+.+++.++.+   .|+++.+++|+.+
T Consensus       152 ~~~~iv~~sS~~~~~~------------------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v  207 (266)
T 3o38_A          152 HGGVIVNNASVLGWRA------------------------QHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIA  207 (266)
T ss_dssp             CCEEEEEECCGGGTCC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC
T ss_pred             CCeEEEEeCCHHHcCC------------------------CCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcc
Confidence            2578999999764322                        124468999999999999988776   4899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ..+.......   ......+..      .       .....+.+++|+|++++.++....  ..| .++++|
T Consensus       208 ~t~~~~~~~~---~~~~~~~~~------~-------~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg  263 (266)
T 3o38_A          208 RHKFLEKTSS---SELLDRLAS------D-------EAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSS  263 (266)
T ss_dssp             CC--------------------------C-------CTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             cchhhhccCc---HHHHHHHHh------c-------CCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcC
Confidence            8764322100   000011000      0       012457889999999999887543  334 456654

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.44  E-value=2.2e-13  Score=109.86  Aligned_cols=164  Identities=16%  Similarity=0.134  Sum_probs=94.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC---------CCCCccccchhHHHHHHHHHHHHH----h
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF---------SSDDPETDMIKPAIQGVVNVLKAC----T   74 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~----~   74 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||....         ...+.. ..++.|+.++.++++++    +
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~  136 (253)
T 3qiv_A           58 GTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYK-KFMSVNLDGALWCTRAVYKKMT  136 (253)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHH-HHHhhhhHHHHHHHHHHHHHHH
Confidence            468899999999998888775       79999999997321         111122 67889999976666655    4


Q ss_pred             cCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEcc
Q 035985           75 KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIP  151 (293)
Q Consensus        75 ~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~  151 (293)
                      +.+ ..+||++||...+.                           +...|+.+|...+.+++.++.+.   ++++.+++|
T Consensus       137 ~~~-~g~iv~isS~~~~~---------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P  188 (253)
T 3qiv_A          137 KRG-GGAIVNQSSTAAWL---------------------------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAP  188 (253)
T ss_dssp             HHT-CEEEEEECC--------------------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC
T ss_pred             hcC-CCEEEEECCccccC---------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEe
Confidence            445 57999999986321                           12469999999999999998875   799999999


Q ss_pred             CCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEEec
Q 035985          152 SLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYICCA  223 (293)
Q Consensus       152 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~~~  223 (293)
                      +.+.++.......   ..+...+....      .       ...+..++|+|++++.++....   .+..|+++|
T Consensus       189 G~v~t~~~~~~~~---~~~~~~~~~~~------~-------~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg  247 (253)
T 3qiv_A          189 GPIDTEANRTTTP---KEMVDDIVKGL------P-------LSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDG  247 (253)
T ss_dssp             -----------------------------------------------CCHHHHHHHHHHSGGGTTCCSCEEEC--
T ss_pred             cCCcccchhhcCc---HHHHHHHhccC------C-------CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            9999875432111   01111111100      0       2345678999999999887543   234666643

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.44  E-value=3.9e-13  Score=108.40  Aligned_cols=169  Identities=15%  Similarity=0.145  Sum_probs=114.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC--CC-----CCccccchhHHHHHHHHHHHHH----hcC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF--SS-----DDPETDMIKPAIQGVVNVLKAC----TKT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~--~~-----~~~~~~~~~~n~~~~~~l~~~~----~~~   76 (293)
                      .++.++++|++|.+++.++++       ++|++||+||....  ..     ++. +..++.|+.++.++++++    ++.
T Consensus        50 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~m~~~  128 (254)
T 3kzv_A           50 DRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAW-KKLYDINFFSIVSLVGIALPELKKT  128 (254)
T ss_dssp             GGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            468999999999998888775       68999999997532  11     112 267889999999999888    443


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-CceEEEEccCCcc
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-NIDLITVIPSLMS  155 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-~~~~~ilR~~~v~  155 (293)
                      +  .++|++||.....+                        ..+...|+.+|...+.+.+.++.+. ++++..++|+.+.
T Consensus       129 ~--g~iv~isS~~~~~~------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~  182 (254)
T 3kzv_A          129 N--GNVVFVSSDACNMY------------------------FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVD  182 (254)
T ss_dssp             T--CEEEEECCSCCCCS------------------------SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCC
T ss_pred             C--CeEEEEcCchhccC------------------------CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccc
Confidence            4  69999999864321                        1234689999999999999998876 8999999999998


Q ss_pred             CCCCCCCCCc-----cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcE-EEec
Q 035985          156 GPSLTPDIPS-----SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRY-ICCA  223 (293)
Q Consensus       156 G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y-~~~~  223 (293)
                      .+........     ........+....   +          ...+.+.+|+|++++.++....   ..|.+ +++|
T Consensus       183 t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----------~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg  246 (254)
T 3kzv_A          183 TDMQVNIRENVGPSSMSAEQLKMFRGLK---E----------NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYND  246 (254)
T ss_dssp             CCCSCCCCCCCCTTTSCHHHHHHHHHHH---T----------TC----CHHHHHHHHHHHHHCCCGGGTTCEEETTC
T ss_pred             chhHHHhhcccCccccCHHHHHHHHHHH---h----------cCCcCCcccHHHHHHHHHhhcccCCCCccEEEecC
Confidence            8754322110     0111111111100   0          2346789999999999887652   34544 5544

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.43  E-value=6.9e-13  Score=109.04  Aligned_cols=166  Identities=20%  Similarity=0.193  Sum_probs=115.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      +++. ..+++|+.++.++++++.    +.+
T Consensus        91 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~  169 (293)
T 3rih_A           91 GNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLS-EVLDVNVKGTVYTVQACLAPLTASG  169 (293)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHTHHHHHHHS
T ss_pred             CcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            378999999999998877764       6899999999764221      1122 678999999999999883    445


Q ss_pred             CccEEEEecccchh-cccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           78 TVKRVILTSSAAAV-SINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        78 ~~~~~v~~SS~~~~-~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                       ..+||++||.... .+.                        .+...|+.+|...+.+.+.++.+   .|+++.+++|+.
T Consensus       170 -~g~iV~isS~~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~  224 (293)
T 3rih_A          170 -RGRVILTSSITGPVTGY------------------------PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGN  224 (293)
T ss_dssp             -SCEEEEECCSBTTTBBC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECS
T ss_pred             -CCEEEEEeChhhccCCC------------------------CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCC
Confidence             5799999997632 211                        23458999999999999988776   489999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      |+++.....    .......+....   +          ..-+...+|+|++++.++....  ..| .++++|
T Consensus       225 v~t~~~~~~----~~~~~~~~~~~~---p----------~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG  280 (293)
T 3rih_A          225 ILTEGLVDM----GEEYISGMARSI---P----------MGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDG  280 (293)
T ss_dssp             BCCHHHHHT----CHHHHHHHHTTS---T----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CcCcchhhc----cHHHHHHHHhcC---C----------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            998642111    011122211111   0          1235679999999999887543  334 567754

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.43  E-value=1.8e-12  Score=105.62  Aligned_cols=170  Identities=18%  Similarity=0.129  Sum_probs=112.0

Q ss_pred             CCeEEEecCCCCCcchhhhh--------cCCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPI--------SRSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~--------~~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .++.++++|++|++++.+++        .++|++||+||......      .+. +..++.|+.++.++++++.    +.
T Consensus        70 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~m~~~  148 (273)
T 1ae1_A           70 LNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDY-NIIMGTNFEAAYHLSQIAYPLLKAS  148 (273)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            46889999999999888776        47999999999753211      112 2567799999999998874    34


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..+||++||...+.+.                        .+...|+.+|...+.+.+.++.+.   |+++++++|+.
T Consensus       149 ~-~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~  203 (273)
T 1ae1_A          149 Q-NGNVIFLSSIAGFSAL------------------------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGV  203 (273)
T ss_dssp             T-SEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred             C-CcEEEEEcCHhhcCCC------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Confidence            4 5799999998643211                        234589999999999999887654   89999999999


Q ss_pred             ccCCCCCCCCCcc--HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSS--VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ++++.........  .......+...   .+          ...+.+++|+|++++.++....  ..| .+.++|
T Consensus       204 v~t~~~~~~~~~~~~~~~~~~~~~~~---~p----------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  265 (273)
T 1ae1_A          204 ILTPLVETAIKKNPHQKEEIDNFIVK---TP----------MGRAGKPQEVSALIAFLCFPAASYITGQIIWADG  265 (273)
T ss_dssp             BC-------------CHHHHHHHHHH---ST----------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CcCchhhhhhhcccCcHHHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECC
Confidence            9987532211000  00111111000   00          1236789999999999886542  234 556654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.43  E-value=8.6e-13  Score=106.06  Aligned_cols=169  Identities=16%  Similarity=0.121  Sum_probs=110.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHH----HhcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKA----CTKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~----~~~~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      .+.. ..++.|+.++.+++++    +++.+
T Consensus        54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~  132 (249)
T 2ew8_A           54 RRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWK-KTFEINVDSGFLMAKAFVPGMKRNG  132 (249)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            468999999999998887753       7999999999754211      1122 6788999998888777    44555


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||...+.+.                        .+...|+.+|...+.+.+.++.+.   |+++++++|+.+
T Consensus       133 -~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  187 (249)
T 2ew8_A          133 -WGRIINLTSTTYWLKI------------------------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLV  187 (249)
T ss_dssp             -CEEEEEECCGGGGSCC------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC
T ss_pred             -CeEEEEEcchhhccCC------------------------CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcC
Confidence             6899999998643321                        234589999999999999987763   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .++........  . ... ....   +. ..       ...+.+++|+|++++.++....  ..| .+.++|.
T Consensus       188 ~t~~~~~~~~~--~-~~~-~~~~---~~-~~-------~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG  245 (249)
T 2ew8_A          188 RTATTEASALS--A-MFD-VLPN---ML-QA-------IPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG  245 (249)
T ss_dssp             ----------------------C---TT-SS-------SCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             cCccchhcccc--c-hhh-HHHH---hh-Cc-------cCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCC
Confidence            88753210000  0 000 0000   00 01       1347889999999999987542  334 4566543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.42  E-value=1.4e-12  Score=106.00  Aligned_cols=158  Identities=15%  Similarity=0.167  Sum_probs=112.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc---------CCCEEEEecccCC-CC------CCCccccchhHHHHHHHHHHHHHhcC--
Q 035985           15 GELKIFRADLTDEASFDAPIS---------RSDIVFHVATPVN-FS------SDDPETDMIKPAIQGVVNVLKACTKT--   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---------~~d~Vih~a~~~~-~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--   76 (293)
                      .++.++.+|++|.+++.++++         ++|+|||+||... ..      ..+.. ..++.|+.++.++++++...  
T Consensus        72 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~  150 (267)
T 1sny_A           72 SNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELL-DTLQTNTVVPIMLAKACLPLLK  150 (267)
T ss_dssp             TTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHH-HHHhhhchHHHHHHHHHHHHHh
Confidence            479999999999999988876         7999999999754 11      01122 57889999999999888543  


Q ss_pred             --------CC----ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---
Q 035985           77 --------KT----VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---  141 (293)
Q Consensus        77 --------~~----~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---  141 (293)
                              +.    ..+||++||...+.+..                     +..+...|+.+|...+.+++.++.+   
T Consensus       151 ~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~  209 (267)
T 1sny_A          151 KAAKANESQPMGVGRAAIINMSSILGSIQGN---------------------TDGGMYAYRTSKSALNAATKSLSVDLYP  209 (267)
T ss_dssp             HHHHHTTTSCSSTTTCEEEEECCGGGCSTTC---------------------CSCCCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             hcccccccccccCCCceEEEEecccccccCC---------------------CCCCchHHHHHHHHHHHHHHHHHHHhhc
Confidence                    10    36899999986433211                     1124468999999999999988766   


Q ss_pred             CCceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE
Q 035985          142 NNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY  219 (293)
Q Consensus       142 ~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y  219 (293)
                      .+++++++||+.|..+....                                ...+..+|+|+.++.++....  ..|.|
T Consensus       210 ~gi~v~~v~Pg~v~t~~~~~--------------------------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~  257 (267)
T 1sny_A          210 QRIMCVSLHPGWVKTDMGGS--------------------------------SAPLDVPTSTGQIVQTISKLGEKQNGGF  257 (267)
T ss_dssp             GTCEEEEECCCSBCSTTTCT--------------------------------TCSBCHHHHHHHHHHHHHHCCGGGTTCE
T ss_pred             CCcEEEEeCCcceecCCCCC--------------------------------CCCCCHHHHHHHHHHHHHhcCcCCCCcE
Confidence            48999999999986653210                                012458899999999887542  34555


Q ss_pred             E-EeccCC
Q 035985          220 I-CCAVNT  226 (293)
Q Consensus       220 ~-~~~~~~  226 (293)
                      + ..|..+
T Consensus       258 ~~~~g~~~  265 (267)
T 1sny_A          258 VNYDGTPL  265 (267)
T ss_dssp             ECTTSCBC
T ss_pred             EccCCcCc
Confidence            3 355443

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.42  E-value=3.4e-13  Score=111.64  Aligned_cols=169  Identities=11%  Similarity=0.084  Sum_probs=115.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++++|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++..    .+
T Consensus        72 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~  150 (303)
T 1yxm_A           72 ARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWH-AVLETNLTGTFYMCKAVYSSWMKEH  150 (303)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHTHHHH
T ss_pred             ccEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHhc
Confidence            478999999999998888775       5999999999643210      1122 5788999999999998765    23


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||.. ..+.                        .....|+.+|...+.+.+.++.+.   |++++++||+.+
T Consensus       151 -~~~iv~isS~~-~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  204 (303)
T 1yxm_A          151 -GGSIVNIIVPT-KAGF------------------------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVI  204 (303)
T ss_dssp             -CEEEEEECCCC-TTCC------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSB
T ss_pred             -CCeEEEEEeec-ccCC------------------------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCc
Confidence             46899999975 3321                        123589999999999999888775   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +|+..............    ..  ......       ...+.+++|+|++++.++....  ..| .++++|
T Consensus       205 ~t~~~~~~~~~~~~~~~----~~--~~~~~p-------~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~g  263 (303)
T 1yxm_A          205 YSQTAVENYGSWGQSFF----EG--SFQKIP-------AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDG  263 (303)
T ss_dssp             CCTGGGTTSGGGGGGGG----TT--GGGGST-------TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccchhhhhccccchHHH----HH--HHhcCc-------ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECC
Confidence            99842111100000000    00  000000       2347899999999999987543  334 557754

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.42  E-value=1.1e-12  Score=106.86  Aligned_cols=175  Identities=17%  Similarity=0.129  Sum_probs=116.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcCC-Ccc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKTK-TVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~   80 (293)
                      .++.++.+|++|.+++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++...- +..
T Consensus        54 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~g  132 (276)
T 1wma_A           54 LSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAE-VTMKTNFFGTRDVCTELLPLIKPQG  132 (276)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHH-HHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred             CeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHH-hhhheeeeeHHHHHHHHHHhhCCCC
Confidence            468999999999998888776       7999999999764221      1122 678899999999999998762 124


Q ss_pred             EEEEecccchhcccccCC-------CCccccCCCCCchh----------hhccCCCCCchhHHHHHHHHHHHHHHHHh--
Q 035985           81 RVILTSSAAAVSINAQNV-------TGLVMDEKNWTDVE----------FLSSEKPPTWGYAASKTLAERAACKFAQE--  141 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~-------~~~~~~E~~~~~~~----------~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~--  141 (293)
                      +||++||..++++.....       ....++|+.+....          ....+..|.+.|+.+|...|.+++.++.+  
T Consensus       133 ~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~  212 (276)
T 1wma_A          133 RVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLS  212 (276)
T ss_dssp             EEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhh
Confidence            999999987554311100       00112222100000          00001234579999999999999888765  


Q ss_pred             -----CCceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC---
Q 035985          142 -----NNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE---  213 (293)
Q Consensus       142 -----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~---  213 (293)
                           .++++++++|+.|.++....                                ..+.+++|+|++++.++..+   
T Consensus       213 ~~~~~~~i~v~~v~PG~v~t~~~~~--------------------------------~~~~~~~~~a~~~~~l~~~~~~~  260 (276)
T 1wma_A          213 EQRKGDKILLNACCPGWVRTDMAGP--------------------------------KATKSPEEGAETPVYLALLPPDA  260 (276)
T ss_dssp             HHCTTSCCEEEEEECCSBCSTTTCT--------------------------------TCSBCHHHHTHHHHHHHSCCTTC
T ss_pred             cccCCCceEEEEecCCccccCcCCc--------------------------------cccCChhHhhhhHhhhhcCcccc
Confidence                 48999999999987653211                                12467999999999998754   


Q ss_pred             -CCCCcEEEe
Q 035985          214 -SASGRYICC  222 (293)
Q Consensus       214 -~~~~~y~~~  222 (293)
                       ...|.|+..
T Consensus       261 ~~~~G~~~~~  270 (276)
T 1wma_A          261 EGPHGQFVSE  270 (276)
T ss_dssp             CCCCSCEEET
T ss_pred             cccCceEecc
Confidence             234666443

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.42  E-value=2.2e-12  Score=103.97  Aligned_cols=166  Identities=17%  Similarity=0.056  Sum_probs=112.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHH----HHHhcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVL----KACTKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~----~~~~~~~   77 (293)
                      .++.++.+|++|++++.++++       ++|++||+||.....      ..+.. ..++.|+.++..++    ..+++.+
T Consensus        51 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~  129 (254)
T 1hdc_A           51 DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFR-KVVEINLTGVFIGMKTVIPAMKDAG  129 (254)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC
Confidence            368899999999998888776       799999999975421      11122 67889999987554    4445555


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||...+.+.                        .+...|+.+|...+.+.+.++.+   .|+++++++|+.+
T Consensus       130 -~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v  184 (254)
T 1hdc_A          130 -GGSIVNISSAAGLMGL------------------------ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMT  184 (254)
T ss_dssp             -CEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CCEEEEECchhhccCC------------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccC
Confidence             6899999998643321                        23458999999999999988765   3899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCc-ccccccccccccCCCCcce-eHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGND-FLLNGLKGMQMLSGSISIS-HVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~v-~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      +++..        .   . ..... ..+....      ....+. +.+|+|++++.++..+.  ..| .+.++|.
T Consensus       185 ~t~~~--------~---~-~~~~~~~~~~~~~------p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          185 YTPMT--------A---E-TGIRQGEGNYPNT------PMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             CCHHH--------H---H-HTCCCSTTSCTTS------TTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCccc--------c---c-cchhHHHHHHhcC------CCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            87531        0   0 11100 0000000      012367 89999999999987642  334 5566543

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.42  E-value=4.6e-13  Score=107.49  Aligned_cols=171  Identities=21%  Similarity=0.205  Sum_probs=114.7

Q ss_pred             CCeEEEecCCCCCcchhhhh---cCCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCCCccE
Q 035985           15 GELKIFRADLTDEASFDAPI---SRSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTKTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~---~~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~   81 (293)
                      +++.++++|++|++++.+++   .++|+|||+||.....      ..+.. ..++.|+.++.++++++.    +.+ ..+
T Consensus        50 ~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~n~~g~~~~~~~~~~~~~~~~-~g~  127 (246)
T 2ag5_A           50 PGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWD-FSMNLNVRSMYLMIKAFLPKMLAQK-SGN  127 (246)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEE
T ss_pred             cCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-Cce
Confidence            37899999999999887764   4789999999975421      11122 677899999999988875    334 579


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~  158 (293)
                      +|++||.....+.+                       .+...|+.+|...+.+++.++.+.   |++++++||+.++++.
T Consensus       128 iv~isS~~~~~~~~-----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  184 (246)
T 2ag5_A          128 IINMSSVASSVKGV-----------------------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS  184 (246)
T ss_dssp             EEEECCSBTTTBCC-----------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred             EEEEechHhCcCCC-----------------------CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcc
Confidence            99999976332111                       134589999999999999987653   8999999999999864


Q ss_pred             CCCCC--CccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          159 LTPDI--PSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       159 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .....  ..........+...   .   .       ...+.+.+|+|++++.++....  ..| .+.++|
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~---~---~-------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdg  241 (246)
T 2ag5_A          185 LQERIQARGNPEEARNDFLKR---Q---K-------TGRFATAEEIAMLCVYLASDESAYVTGNPVIIDG  241 (246)
T ss_dssp             HHHHHHHSSSHHHHHHHHHHT---C---T-------TSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             hhhhhhcccCcHHHHHHHHhc---C---C-------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            21000  00000111111100   0   0       1347899999999999987543  334 456654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.42  E-value=5.2e-13  Score=107.70  Aligned_cols=177  Identities=19%  Similarity=0.158  Sum_probs=120.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcCC-Ccc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKTK-TVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~   80 (293)
                      .++.++++|++|++++.++++       ++|++||+||.....      ..+.. ..++.|+.++.++++++...- +-.
T Consensus        54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~g  132 (255)
T 4eso_A           54 PRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYD-RQFAVNTKGAFFTVQRLTPLIREGG  132 (255)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred             CcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHhcCC
Confidence            478999999999998877654       689999999976421      11222 678999999999999987641 135


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~  157 (293)
                      ++|++||...+.+.                        .+...|+.+|...+.+.+.++.+.   |+++..++|+.+..+
T Consensus       133 ~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~  188 (255)
T 4eso_A          133 SIVFTSSVADEGGH------------------------PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTP  188 (255)
T ss_dssp             EEEEECCGGGSSBC------------------------TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCS
T ss_pred             EEEEECChhhcCCC------------------------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCc
Confidence            89999998643321                        234589999999999999988775   899999999999887


Q ss_pred             CCCCCC-Ccc-HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc-CCCCC-cEEEe-ccCCCHH
Q 035985          158 SLTPDI-PSS-VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK-ESASG-RYICC-AVNTSVP  229 (293)
Q Consensus       158 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~-~~~~~-~y~~~-~~~~t~~  229 (293)
                      ...... ... ...+...... .  .+          ...+.+++|+|++++.++.. ....| .++++ |...++.
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~-~--~p----------~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~  252 (255)
T 4eso_A          189 TKGVAGITEAERAEFKTLGDN-I--TP----------MKRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLS  252 (255)
T ss_dssp             STTCTTSCHHHHHHHHHHHHH-H--ST----------TSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBC
T ss_pred             ccccccCChhhHHHHHHHHhc-c--CC----------CCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCc
Confidence            543211 111 1111111111 0  00          23467899999999988864 22334 56774 4444443

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.42  E-value=4e-13  Score=112.13  Aligned_cols=181  Identities=16%  Similarity=0.141  Sum_probs=125.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcCC----
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKTK----   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----   77 (293)
                      .++.++.+|++|++++.++++       ++|++||+||.....      ..+.. ..+++|+.++.++++++...-    
T Consensus        86 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~~~~~~  164 (322)
T 3qlj_A           86 GEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFD-AVIAVHLKGHFATMRHAAAYWRGLS  164 (322)
T ss_dssp             CEEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcc
Confidence            468899999999998888775       789999999976422      11122 678899999999998875331    


Q ss_pred             -----CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEE
Q 035985           78 -----TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITV  149 (293)
Q Consensus        78 -----~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~il  149 (293)
                           .-.+||++||...+.+..                        ....|+.+|...+.+++.++.+   .|+++.++
T Consensus       165 ~~~~~~~g~IV~isS~~~~~~~~------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v  220 (322)
T 3qlj_A          165 KAGKAVDGRIINTSSGAGLQGSV------------------------GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAI  220 (322)
T ss_dssp             HTTCCCCEEEEEECCHHHHHCBT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             ccCCCCCcEEEEEcCHHHccCCC------------------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEe
Confidence                 014899999987554322                        2358999999999999998876   48999999


Q ss_pred             ccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec-c-
Q 035985          150 IPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA-V-  224 (293)
Q Consensus       150 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~-~-  224 (293)
                      +|+ +..+..........    .    .     .       .....++.++|+|++++.++....  ..| .++++| . 
T Consensus       221 ~PG-~~t~~~~~~~~~~~----~----~-----~-------~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~  279 (322)
T 3qlj_A          221 APS-ARTRMTETVFAEMM----A----T-----Q-------DQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKI  279 (322)
T ss_dssp             EEC-TTSCCSCCSCCC----------------------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEE
T ss_pred             cCC-CCCccchhhhhhhh----h----c-----c-------ccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            999 65443221111100    0    0     0       113456789999999999987543  234 556644 2 


Q ss_pred             ----------------CCCHHHHHHHHHHhCCC
Q 035985          225 ----------------NTSVPELAKFLNKRFPE  241 (293)
Q Consensus       225 ----------------~~t~~e~~~~i~~~~~~  241 (293)
                                      ..+..|+++.+.+.++.
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~  312 (322)
T 3qlj_A          280 RVAEGWAHGPQIDKGARWDPAELGPVVADLLGK  312 (322)
T ss_dssp             EEEECCEEEEEEECSSCCCGGGHHHHHHHHHHH
T ss_pred             ccCCCcccccccCccCCCCHHHHHHHHHHHhhc
Confidence                            23779999999998763

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.42  E-value=1.4e-12  Score=106.59  Aligned_cols=169  Identities=20%  Similarity=0.196  Sum_probs=108.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCC--C------CCCCccccchhHHHHHHHHHHHHHhcC---
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVN--F------SSDDPETDMIKPAIQGVVNVLKACTKT---   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~--~------~~~~~~~~~~~~n~~~~~~l~~~~~~~---   76 (293)
                      .++.++++|++|++++.++++       ++|++||+||...  .      ..+++. ..+++|+.++.++++++...   
T Consensus        79 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~  157 (280)
T 4da9_A           79 ARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFD-TIVGVNLRGTVFFTQAVLKAMLA  157 (280)
T ss_dssp             CCEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHH-HHTTTHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHH
Confidence            478999999999999888876       7899999999732  1      111222 67889999999988877543   


Q ss_pred             -C--CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEc
Q 035985           77 -K--TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVI  150 (293)
Q Consensus        77 -~--~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR  150 (293)
                       +  ...+||++||...+.+.                        .+...|+.+|...+.+.+.++.+   .|+++.+++
T Consensus       158 ~~~~~~g~Iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~  213 (280)
T 4da9_A          158 SDARASRSIINITSVSAVMTS------------------------PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVR  213 (280)
T ss_dssp             HCCCCCEEEEEECCC-------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEE
T ss_pred             hCCCCCCEEEEEcchhhccCC------------------------CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEe
Confidence             1  13589999998644322                        12358999999999999998876   489999999


Q ss_pred             cCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          151 PSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       151 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      |+.|.++......    ............  +          ...+..++|+|++++.++....  ..| .++++|.
T Consensus       214 PG~v~T~~~~~~~----~~~~~~~~~~~~--p----------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (280)
T 4da9_A          214 PGIIRSDMTAAVS----GKYDGLIESGLV--P----------MRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG  274 (280)
T ss_dssp             ECCBCC--------------------------------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTT
T ss_pred             ecCCcCCchhhcc----hhHHHHHhhcCC--C----------cCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            9999876432210    001111111000  0          2346789999999999987654  234 5677543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.42  E-value=7.7e-13  Score=108.81  Aligned_cols=168  Identities=17%  Similarity=0.162  Sum_probs=117.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHhcCC-Cc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACTKTK-TV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~   79 (293)
                      .++.++++|++|++++.++++       ++|++||+||.....       .++.. ..+++|+.++.++++++...- +.
T Consensus        97 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~  175 (291)
T 3ijr_A           97 VKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLE-KTFRINIFSYFHVTKAALSHLKQG  175 (291)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHH-HHHHHHTHHHHHHHHHHHTTCCTT
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhhC
Confidence            478999999999998887765       689999999975321       11223 788999999999999997651 13


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .+||++||...+.+.                        .....|+.+|...+.+++.++.+.   |+++.+++|+.|.+
T Consensus       176 g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T  231 (291)
T 3ijr_A          176 DVIINTASIVAYEGN------------------------ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWT  231 (291)
T ss_dssp             CEEEEECCTHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred             CEEEEEechHhcCCC------------------------CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcC
Confidence            589999998754422                        123589999999999999988764   89999999999988


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +......   -......+ ....            -...+.+++|+|++++.++....  ..| .++++|
T Consensus       232 ~~~~~~~---~~~~~~~~-~~~~------------p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  285 (291)
T 3ijr_A          232 PLIPSSF---DEKKVSQF-GSNV------------PMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNG  285 (291)
T ss_dssp             THHHHHS---CHHHHHHT-TTTS------------TTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             CcccccC---CHHHHHHH-HccC------------CCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECC
Confidence            6321000   00011111 0000            02457789999999999887543  334 556754

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.42  E-value=6.1e-12  Score=101.68  Aligned_cols=167  Identities=14%  Similarity=0.074  Sum_probs=113.2

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCCCC-c---cccchhHHHHHHHHHHHHHh----cCCCcc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSDD-P---ETDMIKPAIQGVVNVLKACT----KTKTVK   80 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~~-~---~~~~~~~n~~~~~~l~~~~~----~~~~~~   80 (293)
                      ++.++.+|++|++++.++++       ++|++||+||.......+ .   ....++.|+.++.++++++.    +.+ ..
T Consensus        72 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g  150 (260)
T 3gem_A           72 GAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VA  150 (260)
T ss_dssp             TCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SC
T ss_pred             CCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc
Confidence            58899999999998887765       689999999976432111 1   12578899999999988774    334 57


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccCCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSGPS  158 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~  158 (293)
                      ++|++||...+.+.                        .+...|+.+|...+.+++.++.++  ++++.+++|+.+..+.
T Consensus       151 ~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~  206 (260)
T 3gem_A          151 DIVHISDDVTRKGS------------------------SKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQP  206 (260)
T ss_dssp             EEEEECCGGGGTCC------------------------SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--
T ss_pred             EEEEECChhhcCCC------------------------CCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCC
Confidence            99999998644321                        234589999999999999988765  5999999999997764


Q ss_pred             CCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEec-cCC
Q 035985          159 LTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICCA-VNT  226 (293)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~~-~~~  226 (293)
                      ....      .........   .+          ..-+..++|+|++++.+++.....| .++++| ..+
T Consensus       207 ~~~~------~~~~~~~~~---~p----------~~r~~~~edva~~v~~L~~~~~itG~~i~vdGG~~~  257 (260)
T 3gem_A          207 KDDA------AYRANALAK---SA----------LGIEPGAEVIYQSLRYLLDSTYVTGTTLTVNGGRHV  257 (260)
T ss_dssp             ----------------------CC----------SCCCCCTHHHHHHHHHHHHCSSCCSCEEEESTTTTT
T ss_pred             CCCH------HHHHHHHhc---CC----------CCCCCCHHHHHHHHHHHhhCCCCCCCEEEECCCccc
Confidence            2210      011111110   00          1224568999999999987665555 567744 444

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.41  E-value=9.7e-13  Score=103.97  Aligned_cols=164  Identities=16%  Similarity=0.092  Sum_probs=112.9

Q ss_pred             cCCCCCcchhhhhc---CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHhcCC-CccEEEEecccch
Q 035985           22 ADLTDEASFDAPIS---RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACTKTK-TVKRVILTSSAAA   90 (293)
Q Consensus        22 ~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~   90 (293)
                      +|++|+++++++++   ++|++||+||.....       .++. +..++.|+.++.++++++...- +-.++|++||...
T Consensus        42 ~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  120 (223)
T 3uce_A           42 LDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQA-KYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS  120 (223)
T ss_dssp             CCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHH-HHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             cCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHH-HhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh
Confidence            79999998888875   689999999975211       1112 2578899999999999987652 1248999999864


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCC-ceEEEEccCCccCCCCCCCCCccHHH
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENN-IDLITVIPSLMSGPSLTPDIPSSVAL  169 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~-~~~~ilR~~~v~G~~~~~~~~~~~~~  169 (293)
                      ..+                        ..+...|+.+|...+.+.+.++.+.+ +++..++|+.+.++............
T Consensus       121 ~~~------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~  176 (223)
T 3uce_A          121 RKV------------------------VANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDA  176 (223)
T ss_dssp             TSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHH
T ss_pred             ccC------------------------CCCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHH
Confidence            321                        12346899999999999999988764 99999999999887533221111111


Q ss_pred             HHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEec
Q 035985          170 AATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICCA  223 (293)
Q Consensus       170 ~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~~  223 (293)
                      +.......   .+          ...+.+++|+|++++.++++....| .++++|
T Consensus       177 ~~~~~~~~---~~----------~~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdg  218 (223)
T 3uce_A          177 MYQRTQSH---LP----------VGKVGEASDIAMAYLFAIQNSYMTGTVIDVDG  218 (223)
T ss_dssp             HHHHHHHH---ST----------TCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             HHHHHhhc---CC----------CCCccCHHHHHHHHHHHccCCCCCCcEEEecC
Confidence            11111110   00          2447789999999999998665555 556744

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.41  E-value=3.2e-13  Score=109.59  Aligned_cols=167  Identities=19%  Similarity=0.185  Sum_probs=111.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++.+|++|++++.++++       ++|++||+||......      .++. ..+++|+.++..+++++.    +.+
T Consensus        73 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~  151 (266)
T 3grp_A           73 KDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWD-DVLAVNLTAASTLTRELIHSMMRRR  151 (266)
T ss_dssp             SSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            478999999999998888775       7999999999764211      1122 678899999777766553    345


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||...+.+.                        .+...|+.+|...+.+.+.++.+.   |+++.+++|+.+
T Consensus       152 -~g~Iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v  206 (266)
T 3grp_A          152 -YGRIINITSIVGVVGN------------------------PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFI  206 (266)
T ss_dssp             -CEEEEEECCC-------------------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CcEEEEECCHHHcCCC------------------------CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcC
Confidence             5799999998644322                        123589999999999998887753   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .++.....    .......+.....             ...+.+.+|+|++++.++....  ..| .++++|.
T Consensus       207 ~t~~~~~~----~~~~~~~~~~~~p-------------~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3grp_A          207 KSAMTDKL----NEKQKEAIMAMIP-------------MKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG  262 (266)
T ss_dssp             CSHHHHTC----CHHHHHHHHTTCT-------------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCchhhcc----CHHHHHHHHhcCC-------------CCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            87532111    1111111111110             2446789999999999887543  234 5577553

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.41  E-value=9.1e-13  Score=107.05  Aligned_cols=170  Identities=19%  Similarity=0.166  Sum_probs=112.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-C------CCCccccchhHHHHHHHHHHHHH----hcC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-S------SDDPETDMIKPAIQGVVNVLKAC----TKT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~----~~~   76 (293)
                      .++.++++|++|++++.++++       ++|+|||+||.... .      ..+.. ..++.|+.++..+++++    ++.
T Consensus        64 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~  142 (267)
T 1iy8_A           64 AEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFD-KVVSINLRGVFLGLEKVLKIMREQ  142 (267)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHc
Confidence            468899999999998888775       68999999997532 1      01122 67889998887666554    444


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                      + ..+||++||...+.+.                        .+...|+.+|...+.+.+.++.+   .|+++++++|+.
T Consensus       143 ~-~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~  197 (267)
T 1iy8_A          143 G-SGMVVNTASVGGIRGI------------------------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGA  197 (267)
T ss_dssp             T-CCEEEEECCGGGTSBC------------------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECS
T ss_pred             C-CCEEEEEcchhhccCC------------------------CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCC
Confidence            5 6799999998643321                        13358999999999999988765   389999999999


Q ss_pred             ccCCCCCCC----CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPD----IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +.++.....    ...........+...   .   .       ...+.+.+|+|++++.++..+.  ..| .+.++|
T Consensus       198 v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~---p-------~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdG  261 (267)
T 1iy8_A          198 IWTPMVENSMKQLDPENPRKAAEEFIQV---N---P-------SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG  261 (267)
T ss_dssp             BCSHHHHHHHHHHCTTCHHHHHHHHHTT---C---T-------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CcCcchhccccccChhhhhhHHHHHhcc---C---C-------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            987531100    000000000011110   0   0       1347889999999999987542  334 456644

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.41  E-value=1.1e-12  Score=106.15  Aligned_cols=174  Identities=20%  Similarity=0.150  Sum_probs=114.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-C-CCCc----cccchhHHHHHHHHHHHHHhcCC-Ccc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-S-SDDP----ETDMIKPAIQGVVNVLKACTKTK-TVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-~-~~~~----~~~~~~~n~~~~~~l~~~~~~~~-~~~   80 (293)
                      .++.++++|++|++++.++++       ++|++||+||.... . ..+.    .+..+++|+.++.++++++...- +-.
T Consensus        58 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g  137 (259)
T 3edm_A           58 RSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGG  137 (259)
T ss_dssp             SCCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEE
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            468999999999998888775       68999999986521 1 1111    12678999999999999998653 024


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccCCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSGPS  158 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~  158 (293)
                      ++|++||...+..                       .......|+.+|...+.+.+.++.+.  ++++..+.|+.+..+.
T Consensus       138 ~iv~isS~~~~~~-----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~  194 (259)
T 3edm_A          138 AIVTFSSQAGRDG-----------------------GGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTF  194 (259)
T ss_dssp             EEEEECCHHHHHC-----------------------CSTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC--
T ss_pred             EEEEEcCHHhccC-----------------------CCCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcc
Confidence            8999999864311                       11234589999999999999988765  3899999999987764


Q ss_pred             CCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEeccCCC
Q 035985          159 LTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAVNTS  227 (293)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~~~t  227 (293)
                      ......   ......+...   .   .       ...+.+++|+|++++.++....  ..| .++++|....
T Consensus       195 ~~~~~~---~~~~~~~~~~---~---p-------~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~  250 (259)
T 3edm_A          195 HDTFTK---PEVRERVAGA---T---S-------LKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLF  250 (259)
T ss_dssp             ------------------------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSB
T ss_pred             cccccC---hHHHHHHHhc---C---C-------CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCC
Confidence            321100   0001110000   0   0       2446789999999999887643  234 5678665443

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.41  E-value=1.6e-12  Score=106.43  Aligned_cols=178  Identities=18%  Similarity=0.150  Sum_probs=116.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC--CCCC----ccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF--SSDD----PETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~--~~~~----~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||....  ...+    ..+..+++|+.++.++++++    ++.+
T Consensus        77 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~  156 (283)
T 3v8b_A           77 GQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG  156 (283)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence            478999999999998887765       69999999997531  1111    11267899999999999988    4445


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..++|++||.......                      +..+...|+.+|...+.+.+.++.+.   |+++.+++|+.+
T Consensus       157 -~g~Iv~isS~~~~~~~----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v  213 (283)
T 3v8b_A          157 -GGAIVVVSSINGTRTF----------------------TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAI  213 (283)
T ss_dssp             -CEEEEEECCSBTTTBC----------------------CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSB
T ss_pred             -CceEEEEcChhhccCC----------------------CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCC
Confidence             5799999997633211                      11234689999999999999998774   799999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ..+......... ..  .  ......... ...+  -....+...+|+|++++.++....  ..| .++++|
T Consensus       214 ~T~~~~~~~~~~-~~--~--~~~~~~~~~-~~~p--~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  277 (283)
T 3v8b_A          214 ETNISDNTKLRH-EE--E--TAIPVEWPK-GQVP--ITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDG  277 (283)
T ss_dssp             SSCTTCCTTBCC-HH--H--HSCCCBCTT-CSCG--GGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             cCCccccccccc-ch--h--hhhhhhhhh-hcCc--cccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECc
Confidence            887543221110 00  0  000000000 0000  000235779999999999887543  345 456654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.41  E-value=9.8e-13  Score=106.67  Aligned_cols=172  Identities=18%  Similarity=0.201  Sum_probs=115.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHhcCC--C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACTKTK--T   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~   78 (293)
                      .++.++++|++|++++.++++       ++|++||+||.....       .++.. ..++.|+.++.++++++...-  +
T Consensus        60 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~  138 (264)
T 3ucx_A           60 RRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMR-DAIELTVFGALRLIQGFTPALEES  138 (264)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHTHHHHHHH
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHc
Confidence            478999999999998887775       689999999874211       11122 678899999999998875331  0


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      -.++|++||.....+.                        .+...|+.+|...+.+.+.++.+   .|+++.+++|+.|+
T Consensus       139 ~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  194 (264)
T 3ucx_A          139 KGAVVNVNSMVVRHSQ------------------------AKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIW  194 (264)
T ss_dssp             TCEEEEECCGGGGCCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCB
T ss_pred             CCEEEEECcchhccCC------------------------CccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccc
Confidence            1599999998643321                        23458999999999999998876   58999999999998


Q ss_pred             CCCCCCCCC-------ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          156 GPSLTPDIP-------SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       156 G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ++.......       .....+...+....             -...+.+++|+|++++.++....  ..| .++++|.
T Consensus       195 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  260 (264)
T 3ucx_A          195 GGTLKSYFEHQAGKYGTSVEDIYNAAAAGS-------------DLKRLPTEDEVASAILFMASDLASGITGQALDVNCG  260 (264)
T ss_dssp             SHHHHHHHHHHHHHTTCCHHHHHHHHHTTS-------------SSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccHHHHHHhhhhhcCCCHHHHHHHHhccC-------------CcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            763211000       00000111111100             02457889999999999887543  334 5577543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.41  E-value=3.1e-13  Score=110.03  Aligned_cols=179  Identities=15%  Similarity=0.060  Sum_probs=118.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-----C-C--CC--ccccchhHHHHHHHHHHHHHhcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-----S-S--DD--PETDMIKPAIQGVVNVLKACTKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-----~-~--~~--~~~~~~~~n~~~~~~l~~~~~~~~   77 (293)
                      +++.++++|++|++++.++++       ++|++||+||....     . .  ..  .....++.|+.++.++++++...-
T Consensus        64 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  143 (271)
T 3ek2_A           64 GSELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPML  143 (271)
T ss_dssp             TCCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGE
T ss_pred             CCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence            468899999999998888775       67999999997542     1 0  01  112678899999999999987651


Q ss_pred             -CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           78 -TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        78 -~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                       +..++|++||.....+.                        .+...|+.+|...+.+++.++.+.   |+++++++|+.
T Consensus       144 ~~~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~  199 (271)
T 3ek2_A          144 SDDASLLTLSYLGAERAI------------------------PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGP  199 (271)
T ss_dssp             EEEEEEEEEECGGGTSBC------------------------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred             ccCceEEEEeccccccCC------------------------CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCc
Confidence             13589999998644321                        234589999999999999888653   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEE-eccCCCHH
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYIC-CAVNTSVP  229 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~-~~~~~t~~  229 (293)
                      |..+.....  .........+....   +          ...+..++|+|++++.++....  ..| .+++ +|..+++.
T Consensus       200 v~T~~~~~~--~~~~~~~~~~~~~~---~----------~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~  264 (271)
T 3ek2_A          200 IKTLAASGI--KSFGKILDFVESNS---P----------LKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVG  264 (271)
T ss_dssp             C-----CCC--HHHHHHHHHHHHHS---T----------TSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCC
T ss_pred             ccchhhhcc--cchHHHHHHHHhcC---C----------cCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehh
Confidence            987643321  11111111111110   0          2346779999999999987533  345 5577 45555555


Q ss_pred             HHH
Q 035985          230 ELA  232 (293)
Q Consensus       230 e~~  232 (293)
                      ++.
T Consensus       265 ~~~  267 (271)
T 3ek2_A          265 GMA  267 (271)
T ss_dssp             CC-
T ss_pred             hhh
Confidence            543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.40  E-value=2.5e-12  Score=104.59  Aligned_cols=167  Identities=16%  Similarity=0.188  Sum_probs=115.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++.+|++|++++.++++       ++|++||+||......      .+. +..++.|+.++.++++++..    .+
T Consensus        75 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~  153 (269)
T 3gk3_A           75 RDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDW-DAVMRTDLDAMFNVTKQFIAGMVERR  153 (269)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            579999999999998887765       7999999999764221      112 26788999999998887753    34


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||.....+.                        .+...|+.+|...+.+++.++.+.   |+++.+++|+.+
T Consensus       154 -~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v  208 (269)
T 3gk3_A          154 -FGRIVNIGSVNGSRGA------------------------FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYL  208 (269)
T ss_dssp             -CEEEEEECCHHHHHCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CCEEEEeCChhhccCC------------------------CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcc
Confidence             5799999998654322                        234589999999999998887663   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ..+......    ....   ...  .....       ....+..++|+|++++.++....  ..| .++++|
T Consensus       209 ~T~~~~~~~----~~~~---~~~--~~~~~-------~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg  264 (269)
T 3gk3_A          209 ATAMVEAVP----QDVL---EAK--ILPQI-------PVGRLGRPDEVAALIAFLCSDDAGFVTGADLAING  264 (269)
T ss_dssp             CCTTTTC--------------CC--SGGGC-------TTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEEST
T ss_pred             cchhhhhhc----hhHH---HHH--hhhcC-------CcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECC
Confidence            876533210    0000   000  00000       12456789999999999987653  334 567754

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.40  E-value=1.6e-13  Score=111.95  Aligned_cols=172  Identities=17%  Similarity=0.145  Sum_probs=114.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||.....      .++.. ..+++|+.++.++++++..    .+
T Consensus        75 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~  153 (277)
T 3gvc_A           75 CGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFD-RVIAINLRGAWLCTKHAAPRMIERG  153 (277)
T ss_dssp             SSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            478999999999998887765       689999999976421      11122 6788999999998888753    44


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||.....+                        ..+...|+.+|...+.+++.++.+   .|+++.+++|+.|
T Consensus       154 -~g~Iv~isS~~~~~~------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v  208 (277)
T 3gvc_A          154 -GGAIVNLSSLAGQVA------------------------VGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFV  208 (277)
T ss_dssp             -CEEEEEECCGGGTSC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CcEEEEEcchhhccC------------------------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCc
Confidence             578999999864332                        123468999999999999988765   4899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCC-cccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGN-DFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .++.........    ....... ........       ...+.+++|+|++++.++....  ..| .++++|
T Consensus       209 ~t~~~~~~~~~~----~~~~~~~~~~~~~~~~-------~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdG  270 (277)
T 3gvc_A          209 DTPMQQTAMAMF----DGALGAGGARSMIARL-------QGRMAAPEEMAGIVVFLLSDDASMITGTTQIADG  270 (277)
T ss_dssp             CCHHHHHHHTCC----------CCHHHHHHHH-------HSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCchHHHhhhcc----hhhHHHHhhhhhhhcc-------ccCCCCHHHHHHHHHHHcCCccCCccCcEEEECC
Confidence            876311000000    0000000 00000000       1346789999999999987543  334 567754

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.40  E-value=1.8e-12  Score=105.94  Aligned_cols=169  Identities=17%  Similarity=0.121  Sum_probs=114.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-CC---CCc---cccchhHHHHH----HHHHHHHHhcC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-SS---DDP---ETDMIKPAIQG----VVNVLKACTKT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-~~---~~~---~~~~~~~n~~~----~~~l~~~~~~~   76 (293)
                      .++.++++|++|++++.++++       .+|+|||+||.... ..   ...   ....++.|+.+    +..++..+++.
T Consensus        83 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~  162 (279)
T 3ctm_A           83 VHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN  162 (279)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CcceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence            468899999999998888775       48999999997543 11   111   12577889999    55667777766


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + .++||++||.....+.                      ...+...|+.+|...|.+++.++.++   + ++++++|+.
T Consensus       163 ~-~~~iv~isS~~~~~~~----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~  218 (279)
T 3ctm_A          163 G-KGSLIITSSISGKIVN----------------------IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGY  218 (279)
T ss_dssp             T-CCEEEEECCCTTSCC-------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECS
T ss_pred             C-CCeEEEECchHhccCC----------------------CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccC
Confidence            6 7899999998633210                      12234689999999999999998764   6 999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      +.++..... .   ......+...   .   .       ...+++++|+|++++.++....  ..| .++++|.
T Consensus       219 v~t~~~~~~-~---~~~~~~~~~~---~---p-------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG  275 (279)
T 3ctm_A          219 IDTDITDFA-S---KDMKAKWWQL---T---P-------LGREGLTQELVGGYLYLASNASTFTTGSDVVIDGG  275 (279)
T ss_dssp             BSSTTTSSC-C---HHHHHHHHHH---S---T-------TCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             Ccccccccc-C---hHHHHHHHHh---C---C-------ccCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            987754211 1   1111111100   0   0       2347889999999999987642  334 5567543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.40  E-value=1.9e-12  Score=105.02  Aligned_cols=161  Identities=19%  Similarity=0.229  Sum_probs=113.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC---CC--ccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS---DD--PETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~---~~--~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++.++++|++|.+++.++++       ++|++||+||......   ..  ..+..+++|+.++.++++++.    +.+ 
T Consensus        59 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-  137 (266)
T 3p19_A           59 PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-  137 (266)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            478899999999998888775       7899999999764221   11  112578899999999777664    445 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..+||++||...+.+.                        .+...|+.+|...+.+.+.++.+   .|+++.+++|+.|.
T Consensus       138 ~g~IV~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  193 (266)
T 3p19_A          138 CGTIINISSIAGKKTF------------------------PDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVK  193 (266)
T ss_dssp             CCEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBS
T ss_pred             CcEEEEEcChhhCCCC------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccc
Confidence            5799999998644321                        23458999999999999988776   48999999999998


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA  215 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~  215 (293)
                      ++........   ...........     .       ...+++++|+|++++.+++.+..
T Consensus       194 T~~~~~~~~~---~~~~~~~~~~~-----~-------~~r~~~pedvA~av~~l~~~~~~  238 (266)
T 3p19_A          194 TELLSHTTSQ---QIKDGYDAWRV-----D-------MGGVLAADDVARAVLFAYQQPQN  238 (266)
T ss_dssp             SSGGGGCSCH---HHHHHHHHHHH-----H-------TTCCBCHHHHHHHHHHHHHSCTT
T ss_pred             cchhhcccch---hhhHHHHhhcc-----c-------ccCCCCHHHHHHHHHHHHcCCCC
Confidence            8753321111   11111111000     1       23468899999999999988754

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.40  E-value=6.1e-12  Score=102.79  Aligned_cols=171  Identities=15%  Similarity=0.089  Sum_probs=116.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc------
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK------   75 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~------   75 (293)
                      .++.++.+|++|++++.++++       .+|++||+||......      .+. +..+++|+.++.++++++..      
T Consensus        73 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~~~~~~  151 (279)
T 3sju_A           73 HDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALW-ADVLDTNLTGVFRVTREVLRAGGMRE  151 (279)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHSSHHH
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHhchhhHhh
Confidence            478999999999998887765       6899999999764211      112 26778999999999998754      


Q ss_pred             CCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccC
Q 035985           76 TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPS  152 (293)
Q Consensus        76 ~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~  152 (293)
                      .+ ..+||++||.....+.                        .....|+.+|...+.+.+.++.+   .|+++.+++|+
T Consensus       152 ~~-~g~iV~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG  206 (279)
T 3sju_A          152 AG-WGRIVNIASTGGKQGV------------------------MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPG  206 (279)
T ss_dssp             HT-CEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEES
T ss_pred             cC-CcEEEEECChhhccCC------------------------CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeC
Confidence            34 5799999998643321                        23458999999999999998876   48999999999


Q ss_pred             CccCCCCCC-------CCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEe
Q 035985          153 LMSGPSLTP-------DIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICC  222 (293)
Q Consensus       153 ~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~  222 (293)
                      .|.++....       ............+....             -...+..++|+|++++.++....  ..| .++++
T Consensus       207 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vd  273 (279)
T 3sju_A          207 YVETPMAERVREGYARHWGVTEQEVHERFNAKI-------------PLGRYSTPEEVAGLVGYLVTDAAASITAQALNVC  273 (279)
T ss_dssp             SBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC-------------TTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEES
T ss_pred             cccchHHHHHHhhhhhcccCChHHHHHHHHhcC-------------CCCCCCCHHHHHHHHHHHhCccccCcCCcEEEEC
Confidence            997652110       00000011111111110             02446889999999999887543  334 55775


Q ss_pred             cc
Q 035985          223 AV  224 (293)
Q Consensus       223 ~~  224 (293)
                      |.
T Consensus       274 GG  275 (279)
T 3sju_A          274 GG  275 (279)
T ss_dssp             TT
T ss_pred             CC
Confidence            53

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.40  E-value=1.3e-12  Score=105.45  Aligned_cols=166  Identities=16%  Similarity=0.151  Sum_probs=115.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++++|++|.+++.++++       ++|++||+||......      .+.. ..+++|+.++.++++++    ++.+
T Consensus        63 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~  141 (256)
T 3ezl_A           63 FDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQ-AVIDTNLTSLFNVTKQVIDGMVERG  141 (256)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            478999999999998887775       6899999999764221      1122 68889999988887766    3445


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||.....+.                        .+...|+.+|...+.+++.++.+   .|+++.+++|+.+
T Consensus       142 -~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v  196 (256)
T 3ezl_A          142 -WGRIINISSVNGQKGQ------------------------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYI  196 (256)
T ss_dssp             -CEEEEEECCCCGGGSC------------------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CCEEEEEcchhhccCC------------------------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcc
Confidence             5799999998644322                        23468999999999999888766   4899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .++.....    .......+...   .   .       ...+.+.+|+|++++.++....  ..| .++++|
T Consensus       197 ~t~~~~~~----~~~~~~~~~~~---~---~-------~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (256)
T 3ezl_A          197 GTDMVKAI----RPDVLEKIVAT---I---P-------VRRLGSPDEIGSIVAWLASEESGFSTGADFSLNG  251 (256)
T ss_dssp             CCHHHHTS----CHHHHHHHHHH---S---T-------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCcccccc----CHHHHHHHHhc---C---C-------CCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            76532211    11111111110   0   0       2446789999999999886543  334 557754

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.40  E-value=1.2e-12  Score=106.69  Aligned_cols=170  Identities=20%  Similarity=0.199  Sum_probs=116.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCc---cccchhHHHHHHHHHHHHHhcC----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDP---ETDMIKPAIQGVVNVLKACTKT----KT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~---~~~~~~~n~~~~~~l~~~~~~~----~~   78 (293)
                      .++.++++|++|++++.++++       ++|++||+||......  ...   .+..+++|+.++.++++++...    +.
T Consensus        81 ~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~  160 (276)
T 3r1i_A           81 GKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGL  160 (276)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            478999999999998888876       7999999999764221  111   1256789999999998887542    21


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..++|++||.....+.                      ...+...|+.+|...+.+.+.++.+   .++++.+++|+.|.
T Consensus       161 ~g~iv~isS~~~~~~~----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~  218 (276)
T 3r1i_A          161 GGTIITTASMSGHIIN----------------------IPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIR  218 (276)
T ss_dssp             CEEEEEECCGGGTSCC----------------------CSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             CcEEEEECchHhcccC----------------------CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCc
Confidence            2689999997643221                      1123468999999999999998876   48999999999998


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .+.....     ......+...   ++          ...+...+|+|++++.++....  ..| +++++|.
T Consensus       219 T~~~~~~-----~~~~~~~~~~---~p----------~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  272 (276)
T 3r1i_A          219 TELVEPL-----ADYHALWEPK---IP----------LGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGG  272 (276)
T ss_dssp             STTTGGG-----GGGHHHHGGG---ST----------TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCccccc-----hHHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHcCccccCccCcEEEECcC
Confidence            7653221     1111111110   00          1346789999999999987543  334 5577554

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.40  E-value=3.2e-12  Score=103.73  Aligned_cols=169  Identities=14%  Similarity=0.048  Sum_probs=116.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC----C------CCCccccchhHHHHHHHHHHHHHhcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF----S------SDDPETDMIKPAIQGVVNVLKACTKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~----~------~~~~~~~~~~~n~~~~~~l~~~~~~~~   77 (293)
                      .++.++++|++|++++.++++       .+|++||+||....    .      ..+.. ..++.|+.++.++++++...-
T Consensus        59 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~  137 (266)
T 3oig_A           59 NDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFL-LAHNISSYSLTAVVKAARPMM  137 (266)
T ss_dssp             CCCEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHGGGC
T ss_pred             CCceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHH-HHHHHhHHHHHHHHHHHHhhc
Confidence            369999999999998888775       68999999997541    1      11122 677899999999999987652


Q ss_pred             -CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           78 -TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        78 -~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                       +-.+||++||.....+.                        .....|+.+|...+.+++.++.+.   |+++.+++|+.
T Consensus       138 ~~~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~  193 (266)
T 3oig_A          138 TEGGSIVTLTYLGGELVM------------------------PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGP  193 (266)
T ss_dssp             TTCEEEEEEECGGGTSCC------------------------TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             CCCceEEEEecccccccC------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCc
Confidence             13589999998644321                        234589999999999999887764   79999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +..+......  ........+....   +          ...+...+|+|++++.++....  ..| .++++|
T Consensus       194 v~T~~~~~~~--~~~~~~~~~~~~~---~----------~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdG  251 (266)
T 3oig_A          194 IRTLSAKGIS--DFNSILKDIEERA---P----------LRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDS  251 (266)
T ss_dssp             CCSGGGTTCT--THHHHHHHHHHHS---T----------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cccccccccc--chHHHHHHHHhcC---C----------CCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECC
Confidence            9876433211  1111111111110   0          2346789999999999987643  334 556654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.40  E-value=1.4e-12  Score=106.00  Aligned_cols=166  Identities=18%  Similarity=0.192  Sum_probs=115.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++..+.+|++|++++.++++       ++|++||+||.....      .++.. ..+++|+.++.++++++..    .+
T Consensus        77 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~  155 (270)
T 3ftp_A           77 LEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWD-AVIDTNLKAVFRLSRAVLRPMMKAR  155 (270)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC
Confidence            468899999999998887775       799999999975421      11122 6788999999999988752    33


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||.....+.                        .+...|+.+|...+.+.+.++.+   .|+++.+++|+.|
T Consensus       156 -~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v  210 (270)
T 3ftp_A          156 -GGRIVNITSVVGSAGN------------------------PGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFI  210 (270)
T ss_dssp             -CEEEEEECCHHHHHCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CCEEEEECchhhCCCC------------------------CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCC
Confidence             4689999998754422                        23458999999999999988776   3899999999998


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ..+....    ........+....      .       ...+.+++|+|++++.++....  ..| .++++|
T Consensus       211 ~T~~~~~----~~~~~~~~~~~~~------p-------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  265 (270)
T 3ftp_A          211 DTDMTKG----LPQEQQTALKTQI------P-------LGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNG  265 (270)
T ss_dssp             CSHHHHH----SCHHHHHHHHTTC------T-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCcchhh----cCHHHHHHHHhcC------C-------CCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECC
Confidence            7652111    0011111111110      0       2447789999999999886443  334 567754

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.40  E-value=6.1e-13  Score=109.55  Aligned_cols=168  Identities=17%  Similarity=0.143  Sum_probs=115.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHhcCC-Cc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACTKTK-TV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~   79 (293)
                      .++.++++|++|.+++.++++       ++|++||+||.....       .++.. ..+++|+.++.++++++...- +-
T Consensus       100 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~  178 (294)
T 3r3s_A          100 RKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQ-QTFAVNVFALFWITQEAIPLLPKG  178 (294)
T ss_dssp             CCEEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHH-HHHHHHTHHHHHHHHHHGGGCCTT
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHhhcC
Confidence            478999999999998877764       689999999975311       11122 688999999999999997653 12


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .+||++||...+.+.                        .....|+.+|...+.+.+.++.+.   |+++.+++|+.|.+
T Consensus       179 g~Iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t  234 (294)
T 3r3s_A          179 ASIITTSSIQAYQPS------------------------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWT  234 (294)
T ss_dssp             CEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred             CEEEEECChhhccCC------------------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcc
Confidence            499999998744321                        234589999999999999988764   89999999999987


Q ss_pred             CCCCCCCCccHHHHHHHHhCCccccccc-ccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGL-KGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +.......            ....+... ..    .-...+...+|+|++++.++....  ..| +++++|
T Consensus       235 ~~~~~~~~------------~~~~~~~~~~~----~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  289 (294)
T 3r3s_A          235 ALQISGGQ------------TQDKIPQFGQQ----TPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCG  289 (294)
T ss_dssp             HHHHTTTS------------CGGGSTTTTTT----STTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccccccCC------------CHHHHHHHHhc----CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            63111000            00000000 00    002346789999999999887543  234 667744

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.39  E-value=3e-12  Score=103.30  Aligned_cols=168  Identities=16%  Similarity=0.115  Sum_probs=112.3

Q ss_pred             EEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--C-C--ccccchhHHHHHHHHHHHHHh----cCCCccE
Q 035985           18 KIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--D-D--PETDMIKPAIQGVVNVLKACT----KTKTVKR   81 (293)
Q Consensus        18 ~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~-~--~~~~~~~~n~~~~~~l~~~~~----~~~~~~~   81 (293)
                      .++++|++|++++.++++       ++|+|||+||......  . .  ..+..++.|+.++.++++++.    +.+ ..+
T Consensus        52 ~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~  130 (256)
T 2d1y_A           52 AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGA  130 (256)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEE
T ss_pred             CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcE
Confidence            788999999988887765       6899999999754211  1 1  112678899999999988775    345 689


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~  158 (293)
                      ||++||.....+.                        .+...|+.+|...+.+++.++.+.   ++++++++|+.+.++.
T Consensus       131 iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  186 (256)
T 2d1y_A          131 IVNVASVQGLFAE------------------------QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA  186 (256)
T ss_dssp             EEEECCGGGTSBC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             EEEEccccccCCC------------------------CCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch
Confidence            9999998644321                        123589999999999999887653   8999999999987642


Q ss_pred             CCCCCCccHHHHHH-HH-hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          159 LTPDIPSSVALAAT-LI-TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       159 ~~~~~~~~~~~~~~-~~-~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .        ..... .. ....... ...+    .....+++++|+|++++.++..+.  ..| .++++|
T Consensus       187 ~--------~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~g  243 (256)
T 2d1y_A          187 V--------LEAIALSPDPERTRRD-WEDL----HALRRLGKPEEVAEAVLFLASEKASFITGAILPVDG  243 (256)
T ss_dssp             H--------HHHHC--------CHH-HHTT----STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             h--------hhccccccCCHHHHHH-HHhc----CCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECC
Confidence            1        11000 00 0000000 0000    012458899999999999987652  234 567744

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.39  E-value=3.1e-12  Score=103.70  Aligned_cols=171  Identities=18%  Similarity=0.181  Sum_probs=114.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++++|++|++++.++++       ++|+|||+||.....      ..+.. ..++.|+.++.++++++..    .+
T Consensus        46 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~  124 (264)
T 2dtx_A           46 AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWR-RIIDVNLFGYYYASKFAIPYMIRSR  124 (264)
T ss_dssp             CSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHH-HHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC
Confidence            368899999999998887775       699999999975421      11122 6788999998888887753    34


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCC--ceEEEEccCCcc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENN--IDLITVIPSLMS  155 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~--~~~~ilR~~~v~  155 (293)
                       ..+||++||..++.+                        ..+...|+.+|...+.+++.++.+.+  +++++++|+.+.
T Consensus       125 -~g~iv~isS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~  179 (264)
T 2dtx_A          125 -DPSIVNISSVQASII------------------------TKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATID  179 (264)
T ss_dssp             -SCEEEEECCGGGTSC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBC
T ss_pred             -CcEEEEECCchhccC------------------------CCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCc
Confidence             679999999864321                        12346899999999999999887654  899999999987


Q ss_pred             CCCCCCCCCccHHHHHHHHhC-Cc----cccc-ccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITG-ND----FLLN-GLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~-~~----~~~~-~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ++..        ..+.....+ ..    .... ...+    .....+++++|+|++++.++..+.  ..| .++++|
T Consensus       180 t~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  244 (264)
T 2dtx_A          180 TPLV--------RKAAELEVGSDPMRIEKKISEWGHE----HPMQRIGKPQEVASAVAFLASREASFITGTCLYVDG  244 (264)
T ss_dssp             SHHH--------HHHHHHHHCSCHHHHHHHHHHHHHH----STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             Ccch--------hhhhhcccccCchhhHHHHHHHHhc----CCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECC
Confidence            6421        111000000 00    0000 0000    002457899999999999987543  334 556654

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.39  E-value=1.4e-12  Score=105.58  Aligned_cols=175  Identities=12%  Similarity=0.073  Sum_probs=113.5

Q ss_pred             CeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCCCc
Q 035985           16 ELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTKTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~   79 (293)
                      ++.++.+|++|++++.++++      ++|+|||+||.....      ..+.. ..++.|+.++..+++++.    +.+ .
T Consensus        59 ~~~~~~~D~~~~~~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-~  136 (260)
T 2z1n_A           59 QVDIVAGDIREPGDIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWD-ESYRLLARSAVWVGRRAAEQMVEKG-W  136 (260)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHH-HHHHHTHHHHHHHHHHHHHHHHHHT-C
T ss_pred             eEEEEEccCCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            68999999999999888876      599999999965321      11122 678899999977766654    445 6


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .+||++||...+.+.                        .+...|+.+|...+.+.+.++.+.   |+++++++|+.+++
T Consensus       137 g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  192 (260)
T 2z1n_A          137 GRMVYIGSVTLLRPW------------------------QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILT  192 (260)
T ss_dssp             EEEEEECCGGGTSCC------------------------TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHH
T ss_pred             cEEEEECchhhcCCC------------------------CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCccc
Confidence            899999998643211                        234589999999999999887664   89999999999998


Q ss_pred             CCCCCCCCccHH--HHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          157 PSLTPDIPSSVA--LAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       157 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      +...........  ....... .........       ...+.+++|+|++++.++....  ..| .++++|.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p-------~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          193 DRVRSLAEERARRSGITVEEA-LKSMASRIP-------MGRVGKPEELASVVAFLASEKASFITGAVIPVDGG  257 (260)
T ss_dssp             CCCC------------------------CCT-------TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             chhhhhhhhhhcccCCcHHHH-HHHHHhcCC-------CCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            764311000000  0000000 000000000       1346789999999999987542  334 4566543

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.39  E-value=2.2e-12  Score=103.34  Aligned_cols=175  Identities=17%  Similarity=0.190  Sum_probs=116.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-----CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcCC-CccEE
Q 035985           15 GELKIFRADLTDEASFDAPIS-----RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKTK-TVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-----~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~   82 (293)
                      ..+.++++|++|++++.++++     ++|++||+||.....      .++. +..+++|+.++.++++++...- +-.++
T Consensus        44 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~vN~~g~~~~~~~~~~~~~~~g~i  122 (244)
T 4e4y_A           44 ENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESI-KKVLDLNVWSSIYFIKGLENNLKVGASI  122 (244)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHH-HHHHHHHTHHHHHHHHHTGGGEEEEEEE
T ss_pred             ccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHH-HHHHHHccHHHHHHHHHHHHHhccCcEE
Confidence            468899999999999888876     789999999975321      1112 2678999999999999987652 01489


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPSL  159 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~  159 (293)
                      |++||...+.+.                        .+...|+.+|...+.+.+.++.+   .|+++.+++|+.+.++..
T Consensus       123 v~~sS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  178 (244)
T 4e4y_A          123 VFNGSDQCFIAK------------------------PNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLY  178 (244)
T ss_dssp             EEECCGGGTCCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHH
T ss_pred             EEECCHHHccCC------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhh
Confidence            999998643321                        23458999999999999998864   489999999999976531


Q ss_pred             CCCCCccHHHHHHHHhCCcc--cc-cccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          160 TPDIPSSVALAATLITGNDF--LL-NGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~--~~-~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ..    ........ .+...  .. .....    .-...+.+++|+|++++.++....  ..| .++++|
T Consensus       179 ~~----~~~~~~~~-~~~~~~~~~~~~~~~----~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  239 (244)
T 4e4y_A          179 RN----LIQKYANN-VGISFDEAQKQEEKE----FPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDG  239 (244)
T ss_dssp             HH----HHHHHHHH-HTCCHHHHHHHHHTT----STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HH----HHHhhhhh-cCCCHHHHHHHHhhc----CCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECC
Confidence            10    00000000 00000  00 00000    002457889999999999987543  234 556754

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.39  E-value=1.5e-12  Score=105.24  Aligned_cols=175  Identities=21%  Similarity=0.192  Sum_probs=114.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      .+.. ..++.|+.++.++++++...    +
T Consensus        53 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~  131 (258)
T 3a28_C           53 QKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLK-QIYSVNVFSVFFGIQAASRKFDELG  131 (258)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHhccHHHHHHHHHHHHHHHhcC
Confidence            468999999999998887775       7999999999754211      1122 67889999999998887653    4


Q ss_pred             Cc-cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           78 TV-KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        78 ~~-~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                       . .+||++||...+.+.                        .+...|+.+|...+.+.+.++.+.   ++++++++|+.
T Consensus       132 -~~g~iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~  186 (258)
T 3a28_C          132 -VKGKIINAASIAAIQGF------------------------PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGI  186 (258)
T ss_dssp             -CCCEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECC
T ss_pred             -CCcEEEEECcchhccCC------------------------CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCc
Confidence             5 799999998643321                        234589999999999999887653   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCC--cccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGN--DFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +..+....    ....+.. ..+.  ..........   .-...+.+.+|+|++++.++....  ..| .+.++|
T Consensus       187 v~t~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~---~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  253 (258)
T 3a28_C          187 VGTGMWEQ----IDAELSK-INGKPIGENFKEYSSS---IALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDG  253 (258)
T ss_dssp             BCSHHHHH----HHHHHHH-HHCCCTTHHHHHHHTT---CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             cCChhhhh----hhhhhcc-ccCCchHHHHHHHHhc---CCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECC
Confidence            86642100    0000000 0010  0000000000   001347889999999999987542  334 456644

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.39  E-value=2.6e-12  Score=105.89  Aligned_cols=169  Identities=14%  Similarity=0.054  Sum_probs=117.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC----------CCCCccccchhHHHHHHHHHHHHHhcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF----------SSDDPETDMIKPAIQGVVNVLKACTKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~   77 (293)
                      +++.++++|++|++++.++++       ++|++||+||....          ...+.. ..++.|+.++.++++++...-
T Consensus        80 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m  158 (296)
T 3k31_A           80 GVKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFL-TSMHISCYSFTYIASKAEPLM  158 (296)
T ss_dssp             TCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHGGGC
T ss_pred             CCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence            457899999999998888775       68999999997531          111222 678899999999999987642


Q ss_pred             -CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           78 -TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        78 -~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                       +..++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++.+++|+.
T Consensus       159 ~~~g~IV~isS~~~~~~~------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~  214 (296)
T 3k31_A          159 TNGGSILTLSYYGAEKVV------------------------PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGP  214 (296)
T ss_dssp             TTCEEEEEEECGGGTSCC------------------------TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECC
T ss_pred             hcCCEEEEEEehhhccCC------------------------CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECC
Confidence             13589999998643321                        233589999999999999887764   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      |..+.....  .............   .+          ..-+...+|+|++++.++....  ..| .++++|
T Consensus       215 v~T~~~~~~--~~~~~~~~~~~~~---~p----------~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  272 (296)
T 3k31_A          215 VRTLASSGI--SDFHYILTWNKYN---SP----------LRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDC  272 (296)
T ss_dssp             CCCSSCCSC--HHHHHHHHHHHHH---ST----------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CcCchhhcc--cchHHHHHHHHhc---CC----------CCCCCCHHHHHHHHHHHcCCccCCccCCEEEECC
Confidence            988754321  1111111111111   11          1235679999999999987543  344 557744

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.38  E-value=9.5e-13  Score=107.52  Aligned_cols=169  Identities=12%  Similarity=0.129  Sum_probs=115.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||.....      .++.. ..++.|+.++.++++++..    .+
T Consensus        77 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~  155 (277)
T 4fc7_A           77 RRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFK-TVMDIDTSGTFNVSRVLYEKFFRDH  155 (277)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHTHHHH
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC
Confidence            478999999999998887765       789999999965321      11122 6788999999999988742    33


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       ..+||++||.....+..                        ....|+.+|...+.+.+.++.+.   |+++.+++|+.|
T Consensus       156 -~g~iv~isS~~~~~~~~------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v  210 (277)
T 4fc7_A          156 -GGVIVNITATLGNRGQA------------------------LQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPI  210 (277)
T ss_dssp             -CEEEEEECCSHHHHTCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred             -CCEEEEECchhhCCCCC------------------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCE
Confidence             46999999987544221                        23589999999999999887764   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .++......... ...........   +          ..-+...+|+|++++.++....  ..| .++++|
T Consensus       211 ~t~~~~~~~~~~-~~~~~~~~~~~---p----------~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdG  268 (277)
T 4fc7_A          211 SGTEGLRRLGGP-QASLSTKVTAS---P----------LQRLGNKTEIAHSVLYLASPLASYVTGAVLVADG  268 (277)
T ss_dssp             SSSHHHHHHSCC-HHHHHHHHHTS---T----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ecchhhhhccCC-HHHHHHHhccC---C----------CCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECC
Confidence            876311000000 01111111110   0          2346789999999999987543  344 556744

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.38  E-value=1.9e-12  Score=104.58  Aligned_cols=168  Identities=21%  Similarity=0.222  Sum_probs=116.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecccCC----------CCCCCccccchhHHHHHHHHHHHHHhcC--
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVATPVN----------FSSDDPETDMIKPAIQGVVNVLKACTKT--   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--   76 (293)
                      .++.++++|++|++++.++++      ++|++||+||...          ....+.. ..++.|+.++..+++++...  
T Consensus        52 ~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~  130 (257)
T 3tl3_A           52 DRARFAAADVTDEAAVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFR-KIVDINLVGSFNVLRLAAERIA  130 (257)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHH-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHH-HHHHHccHHHHHHHHHHHHHHH
Confidence            478999999999998888775      7999999999652          1112233 78899999999999887642  


Q ss_pred             ---------CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCc
Q 035985           77 ---------KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNI  144 (293)
Q Consensus        77 ---------~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~  144 (293)
                               +.-.++|++||...+.+.+                        +...|+.+|...+.+.+.++.+   .|+
T Consensus       131 ~~~~~~~~~~~~g~iv~isS~~~~~~~~------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI  186 (257)
T 3tl3_A          131 KTEPVGPNAEERGVIINTASVAAFDGQI------------------------GQAAYSASKGGVVGMTLPIARDLASHRI  186 (257)
T ss_dssp             TSCCC--CCCCSEEEEEECCCC--CCHH------------------------HHHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             HhcccccccCCCcEEEEEcchhhcCCCC------------------------CCccHHHHHHHHHHHHHHHHHHhcccCc
Confidence                     1145899999986443221                        2248999999999999888765   389


Q ss_pred             eEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEec
Q 035985          145 DLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICCA  223 (293)
Q Consensus       145 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~~  223 (293)
                      ++..++|+.|..+.....    .......+....   +.         ...+.+.+|+|++++.+++++...| .++++|
T Consensus       187 ~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~~---~~---------~~r~~~p~dva~~v~~l~s~~~itG~~i~vdG  250 (257)
T 3tl3_A          187 RVMTIAPGLFDTPLLASL----PEEARASLGKQV---PH---------PSRLGNPDEYGALAVHIIENPMLNGEVIRLDG  250 (257)
T ss_dssp             EEEEEEECSBCCTTC-------CHHHHHHHHHTS---SS---------SCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             EEEEEEecCccChhhhhc----cHHHHHHHHhcC---CC---------CCCccCHHHHHHHHHHHhcCCCCCCCEEEECC
Confidence            999999999987643221    111111111111   00         1346789999999999998765556 456744

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.38  E-value=8.7e-12  Score=101.21  Aligned_cols=166  Identities=18%  Similarity=0.174  Sum_probs=113.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++++|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++.    +.+
T Consensus        71 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~m~~~~  149 (267)
T 1vl8_A           71 VETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFR-QVIEVNLFGTYYVCREAFSLLRESD  149 (267)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHTTCS
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC
Confidence            468889999999998887765       6899999999754211      1112 578899999999988773    444


Q ss_pred             CccEEEEecccc-hhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           78 TVKRVILTSSAA-AVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        78 ~~~~~v~~SS~~-~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                       ..+||++||.. ...                        +..+...|+.+|...+.+++.++.+   .|+++++++|+.
T Consensus       150 -~g~iv~isS~~~~~~------------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~  204 (267)
T 1vl8_A          150 -NPSIINIGSLTVEEV------------------------TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGW  204 (267)
T ss_dssp             -SCEEEEECCGGGTCC------------------------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECC
T ss_pred             -CcEEEEECCcchhcc------------------------CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEecc
Confidence             68999999975 221                        1123458999999999999988765   389999999999


Q ss_pred             ccCCCCCCCCCccH--HHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSSV--ALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +.++....    ..  ......+...   .   .       ...+.+.+|+|++++.++....  ..| .+.++|
T Consensus       205 v~T~~~~~----~~~~~~~~~~~~~~---~---p-------~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  262 (267)
T 1vl8_A          205 YRTKMTEA----VFSDPEKLDYMLKR---I---P-------LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDG  262 (267)
T ss_dssp             BCSTTTHH----HHTCHHHHHHHHHT---C---T-------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             Cccccccc----cccChHHHHHHHhh---C---C-------CCCCcCHHHHHHHHHHHcCccccCCcCCeEEECC
Confidence            97764210    00  0111111110   0   0       1236789999999999887542  344 456654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.38  E-value=1.2e-12  Score=104.97  Aligned_cols=169  Identities=21%  Similarity=0.214  Sum_probs=115.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      ++.. ..++.|+.++.++++++    ++.+
T Consensus        52 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~  130 (247)
T 3rwb_A           52 KKARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWR-KIIDVNLTGTFIVTRAGTDQMRAAG  130 (247)
T ss_dssp             TTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC
Confidence            478999999999998888775       7999999999764221      1122 67889999999998874    4433


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                      ...++|++||.....+.                        .....|+.+|...+.+.+.++.+   .|+++.+++|+.+
T Consensus       131 ~~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v  186 (247)
T 3rwb_A          131 KAGRVISIASNTFFAGT------------------------PNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLI  186 (247)
T ss_dssp             CCEEEEEECCTHHHHTC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             CCcEEEEECchhhccCC------------------------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcC
Confidence            24799999998754422                        13358999999999999988876   4899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ..+............+....      ..          ...+...+|+|++++.++....  ..| .++++|.
T Consensus       187 ~t~~~~~~~~~~~~~~~~~~------~~----------~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  243 (247)
T 3rwb_A          187 ESDGVKASPHNEAFGFVEML------QA----------MKGKGQPEHIADVVSFLASDDARWITGQTLNVDAG  243 (247)
T ss_dssp             CCHHHHTSGGGGGHHHHHHH------SS----------SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCccccccChhHHHHHHhcc------cc----------cCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            76532111000000000000      00          1235679999999999887643  344 5566553

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.38  E-value=2e-12  Score=105.05  Aligned_cols=171  Identities=18%  Similarity=0.134  Sum_probs=115.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--C-C--ccccchhHHHHHHHHHHHHHhc----CCCc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--D-D--PETDMIKPAIQGVVNVLKACTK----TKTV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~-~--~~~~~~~~n~~~~~~l~~~~~~----~~~~   79 (293)
                      .+..+++|++|++++.++++       ++|++||+||......  . .  ..+..+++|+.++..+++++..    .+ .
T Consensus        54 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~  132 (269)
T 3vtz_A           54 VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-H  132 (269)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-C
Confidence            57889999999998888775       7899999999754221  0 1  1125778999999999887653    34 5


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccCC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSGP  157 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~  157 (293)
                      .+||++||...+.+.                        .....|+.+|...+.+++.++.+.  ++++.+++|+.|.++
T Consensus       133 g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~  188 (269)
T 3vtz_A          133 GSIINIASVQSYAAT------------------------KNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTP  188 (269)
T ss_dssp             EEEEEECCGGGTSBC------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCH
T ss_pred             CEEEEECchhhccCC------------------------CCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCc
Confidence            799999998744321                        233589999999999999998776  799999999999875


Q ss_pred             CCCCC-------CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          158 SLTPD-------IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       158 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .....       ...........+..      .       .-...+.+++|+|++++.++....  ..| .++++|.
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~-------~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  252 (269)
T 3vtz_A          189 MVIKAAKMEVGEDENAVERKIEEWGR------Q-------HPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG  252 (269)
T ss_dssp             HHHHHHHHHHCCSTTHHHHHHHHHHH------H-------STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             chhhhhhccccccchhhHHHHHHHHh------c-------CCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence            31100       00000011111000      0       002457889999999999887543  334 5677553

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.37  E-value=1.7e-12  Score=105.52  Aligned_cols=177  Identities=16%  Similarity=0.124  Sum_probs=116.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-------CCccccchhHHHHHHHHHHHHHhcC---C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-------DDPETDMIKPAIQGVVNVLKACTKT---K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~   77 (293)
                      +++.++++|++|++++.++++       ++|++||+||......       .+.. ..++.|+.++.++++++...   +
T Consensus        54 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~  132 (270)
T 1yde_A           54 PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFR-QLLELNLLGTYTLTKLALPYLRKS  132 (270)
T ss_dssp             TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHC
Confidence            358899999999998887765       6899999999753210       1122 67889999999999888632   2


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||....++.+                        ....|+.+|...+.+.+.++.+   +|+++++++|+.+
T Consensus       133 -~g~iv~isS~~~~~~~~------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v  187 (270)
T 1yde_A          133 -QGNVINISSLVGAIGQA------------------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNI  187 (270)
T ss_dssp             -TCEEEEECCHHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred             -CCEEEEEcCccccCCCC------------------------CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcc
Confidence             36999999986444321                        2358999999999999988765   4899999999999


Q ss_pred             cCCCCCC---CCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC-CCCC-cEEEe-ccCCCH
Q 035985          155 SGPSLTP---DIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE-SASG-RYICC-AVNTSV  228 (293)
Q Consensus       155 ~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~-~~~~-~y~~~-~~~~t~  228 (293)
                      +++....   ........+......    .+          ...+...+|+|++++.++... ...| .+.++ |..+.+
T Consensus       188 ~t~~~~~~~~~~~~~~~~~~~~~~~----~p----------~~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~  253 (270)
T 1yde_A          188 WTPLWEELAALMPDPRASIREGMLA----QP----------LGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGY  253 (270)
T ss_dssp             CCHHHHHHHTTSSSHHHHHHHHHHT----ST----------TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC
T ss_pred             ccchhhhhhhcccchHHHHHHHhhc----CC----------CCCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeeccc
Confidence            8863110   000000001000000    00          123578999999999888652 2334 56664 445554


Q ss_pred             HHH
Q 035985          229 PEL  231 (293)
Q Consensus       229 ~e~  231 (293)
                      ...
T Consensus       254 ~~~  256 (270)
T 1yde_A          254 GCK  256 (270)
T ss_dssp             ---
T ss_pred             CcC
Confidence            433

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.37  E-value=2.9e-12  Score=104.77  Aligned_cols=169  Identities=9%  Similarity=0.004  Sum_probs=116.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-----------CCCCccccchhHHHHHHHHHHHHHhcC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-----------SSDDPETDMIKPAIQGVVNVLKACTKT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~   76 (293)
                      +++.++.+|++|.+++.++++       ++|+|||+||....           ...+. ...++.|+.++.++++++...
T Consensus        75 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~  153 (280)
T 3nrc_A           75 NPAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGF-SIAHDISAYSFAALAKEGRSM  153 (280)
T ss_dssp             CCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHH-HHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence            468999999999998887764       57999999997642           11112 257889999999999988643


Q ss_pred             --CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEcc
Q 035985           77 --KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIP  151 (293)
Q Consensus        77 --~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~  151 (293)
                        .+..+||++||..+..+                        ..+...|+.+|...+.+++.++.+   .|+++.+++|
T Consensus       154 ~~~~~g~iv~isS~~~~~~------------------------~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~P  209 (280)
T 3nrc_A          154 MKNRNASMVALTYIGAEKA------------------------MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSA  209 (280)
T ss_dssp             HTTTTCEEEEEECGGGTSC------------------------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             hhcCCCeEEEEeccccccC------------------------CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEee
Confidence              11469999999864332                        123468999999999999988765   4899999999


Q ss_pred             CCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          152 SLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       152 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +.|..+......  .............   +          ...+..++|+|++++.++....  ..| .++++|
T Consensus       210 G~v~T~~~~~~~--~~~~~~~~~~~~~---p----------~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdg  269 (280)
T 3nrc_A          210 GPIKTLAASGIS--NFKKMLDYNAMVS---P----------LKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDA  269 (280)
T ss_dssp             CCCCCSGGGGCT--THHHHHHHHHHHS---T----------TCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred             ccccchhhhcCc--chHHHHHHHHhcC---C----------CCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECC
Confidence            999886432211  1111111111100   0          2336779999999999987543  344 556754

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.37  E-value=7.4e-12  Score=99.94  Aligned_cols=168  Identities=14%  Similarity=0.095  Sum_probs=112.7

Q ss_pred             eEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCCc
Q 035985           17 LKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKTV   79 (293)
Q Consensus        17 v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~   79 (293)
                      +.++++|++| +++.++++       ++|++||+||......      .+.. ..++.|+.++.++++++.    +.+ .
T Consensus        45 ~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~~~~~~~~~~~~~~-~  121 (239)
T 2ekp_A           45 AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWR-RVLYLHLDVAFLLAQAAAPHMAEAG-W  121 (239)
T ss_dssp             CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-C
Confidence            7889999999 87776653       7999999999753211      1122 678899999999888874    345 6


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .++|++||...+.+.                      ...+...|+.+|...+.+.+.++.+.   |++++++||+.+.+
T Consensus       122 g~iv~isS~~~~~~~----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  179 (239)
T 2ekp_A          122 GRVLFIGSVTTFTAG----------------------GPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVET  179 (239)
T ss_dssp             EEEEEECCGGGTSCC----------------------TTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCS
T ss_pred             cEEEEECchhhccCC----------------------CCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccC
Confidence            899999998643321                      01234689999999999999887764   89999999999987


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      +...... . .......+....      .       ...+...+|+|++++.++....  ..| .+.++|.
T Consensus       180 ~~~~~~~-~-~~~~~~~~~~~~------p-------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          180 EFTLPLR-Q-NPELYEPITARI------P-------MGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             GGGHHHH-T-CHHHHHHHHTTC------T-------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             chhhccc-c-CHHHHHHHHhcC------C-------CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence            6421000 0 011111111110      0       1346789999999999887542  334 4466553

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.37  E-value=9.2e-13  Score=107.18  Aligned_cols=168  Identities=13%  Similarity=0.100  Sum_probs=115.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||.....      .++.. ..++.|+.++.++++++...    +
T Consensus        75 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~  153 (271)
T 4ibo_A           75 HDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQ-RVIDTNLTSAFMIGREAAKRMIPRG  153 (271)
T ss_dssp             CCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            478999999999998888775       699999999975422      11222 67899999999998776543    4


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||.....+.                        .+...|+.+|...+.+++.++.+   .|+++..++|+.+
T Consensus       154 -~g~iV~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v  208 (271)
T 4ibo_A          154 -YGKIVNIGSLTSELAR------------------------ATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYM  208 (271)
T ss_dssp             -CEEEEEECCGGGTSBC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CcEEEEEccHHhCCCC------------------------CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccE
Confidence             4699999997643321                        23458999999999999998776   4899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .++......  ........+... .  +          ...+..++|+|++++.++....  ..| .++++|
T Consensus       209 ~T~~~~~~~--~~~~~~~~~~~~-~--p----------~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdG  265 (271)
T 4ibo_A          209 LTDMNQALI--DNPEFDAWVKAR-T--P----------AKRWGKPQELVGTAVFLSASASDYVNGQIIYVDG  265 (271)
T ss_dssp             CSGGGHHHH--HCHHHHHHHHHH-S--T----------TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             eCcchhhcc--cCHHHHHHHHhc-C--C----------CCCCcCHHHHHHHHHHHhCccccCCCCcEEEECC
Confidence            876421100  000111111110 0  0          2346789999999999887543  334 567754

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.37  E-value=6.7e-12  Score=102.12  Aligned_cols=167  Identities=17%  Similarity=0.130  Sum_probs=115.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++++|++|.+++.++++       ++|++||+||......      .+.. ..++.|+.++.++++++..    .+
T Consensus        79 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~  157 (271)
T 4iin_A           79 YKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFH-HVIDNNLTSAFIGCREALKVMSKSR  157 (271)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHH-HHHHhccHHHHHHHHHHHHHHhhcC
Confidence            478999999999998887775       7999999999764221      1122 6788999999888887643    34


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..++|++||.....+.                        .+...|+.+|...+.+++.++.+   .++++.+++|+.+
T Consensus       158 -~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v  212 (271)
T 4iin_A          158 -FGSVVNVASIIGERGN------------------------MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFI  212 (271)
T ss_dssp             -CEEEEEECCHHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSB
T ss_pred             -CCEEEEEechhhcCCC------------------------CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcc
Confidence             5799999998754322                        23468999999999999988876   4899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ..+.....    .......      .....       ....+.+++|+|++++.++....  ..| .++++|.
T Consensus       213 ~T~~~~~~----~~~~~~~------~~~~~-------~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG  268 (271)
T 4iin_A          213 ETDMNANL----KDELKAD------YVKNI-------PLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGG  268 (271)
T ss_dssp             CCC----------------------CGGGC-------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCchhhh----cHHHHHH------HHhcC-------CcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCC
Confidence            77643211    0000000      00000       12457889999999999987643  334 5567543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.37  E-value=8.8e-12  Score=103.71  Aligned_cols=173  Identities=23%  Similarity=0.197  Sum_probs=116.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      .+.. ..+++|+.++.++++++..    .+
T Consensus       107 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~  185 (317)
T 3oec_A          107 RRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWS-DILQTNLIGAWHACRAVLPSMIERG  185 (317)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTC
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHcC
Confidence            478999999999998888775       6899999999764211      1122 6788999999999888743    22


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      ...+||++||...+.+.                        .....|+.+|...+.+.+.++.+.   |+++.+++|+.|
T Consensus       186 ~~g~Iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v  241 (317)
T 3oec_A          186 QGGSVIFVSSTVGLRGA------------------------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAV  241 (317)
T ss_dssp             SCEEEEEECCGGGSSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             CCCEEEEECcHHhcCCC------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcc
Confidence            23689999998644321                        233589999999999999988764   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCC---cc------cccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEe
Q 035985          155 SGPSLTPDIPSSVALAATLITGN---DF------LLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICC  222 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~---~~------~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~  222 (293)
                      .++....      ..........   ..      .+....     .....+++++|+|++++.++....  ..| +++++
T Consensus       242 ~T~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vd  310 (317)
T 3oec_A          242 NTEMALN------EKLLKMFLPHLENPTREDAAELFSQLT-----LLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVD  310 (317)
T ss_dssp             SSHHHHC------HHHHHHHCTTCSSCCHHHHHHHHTTTC-----SSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred             cCccccc------hhhhhhhhhhccccchhHHHHHHhhhc-----cCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEEC
Confidence            8763211      0001111000   00      000000     112568899999999999886543  334 56775


Q ss_pred             c
Q 035985          223 A  223 (293)
Q Consensus       223 ~  223 (293)
                      |
T Consensus       311 G  311 (317)
T 3oec_A          311 G  311 (317)
T ss_dssp             T
T ss_pred             c
Confidence            4

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.37  E-value=1.5e-12  Score=105.93  Aligned_cols=159  Identities=17%  Similarity=0.147  Sum_probs=105.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHhcC----
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACTKT----   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----   76 (293)
                      .++.++++|++|++++.++++       ++|++||+||.....       .++. +..+++|+.++.++++++...    
T Consensus        74 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~-~~~~~vN~~g~~~~~~~~~~~~~~~  152 (272)
T 4dyv_A           74 DDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQW-KQVVDTNLTGPFLCTQEAFRVMKAQ  152 (272)
T ss_dssp             SCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHS
T ss_pred             CCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHH-HHHHHhccHHHHHHHHHHHHHHHhC
Confidence            478999999999998888775       799999999975321       1112 267889999988888876532    


Q ss_pred             C-CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccC
Q 035985           77 K-TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPS  152 (293)
Q Consensus        77 ~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~  152 (293)
                      + +..+||++||...+.+                        ..+...|+.+|...+.+.+.++.+   .++++..++|+
T Consensus       153 ~~~~g~IV~isS~~~~~~------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  208 (272)
T 4dyv_A          153 EPRGGRIINNGSISATSP------------------------RPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIG  208 (272)
T ss_dssp             SSCCEEEEEECCSSTTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEE
T ss_pred             CCCCcEEEEECchhhcCC------------------------CCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEEC
Confidence            2 1358999999864432                        123468999999999999988766   38999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCC
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESAS  216 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~  216 (293)
                      .|..+.....        ..   +.........       ...+..++|+|++++.++..+...
T Consensus       209 ~v~T~~~~~~--------~~---~~~~~~~~~~-------~~~~~~pedvA~~v~fL~s~~~~~  254 (272)
T 4dyv_A          209 NADTPMAQKM--------KA---GVPQADLSIK-------VEPVMDVAHVASAVVYMASLPLDA  254 (272)
T ss_dssp             ECC------------------------------------------CHHHHHHHHHHHHHSCTTS
T ss_pred             cccChhhhhh--------cc---cchhhhhccc-------ccCCCCHHHHHHHHHHHhCCCCcC
Confidence            9877642211        00   0000000000       234788999999999999876543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.36  E-value=4.5e-12  Score=100.85  Aligned_cols=145  Identities=14%  Similarity=0.093  Sum_probs=99.2

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHH----HhcCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKA----CTKTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~----~~~~~~   78 (293)
                      ++.++.+|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++.    +++.+ 
T Consensus        51 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~~~~~~~~~~~~~~-  128 (234)
T 2ehd_A           51 GALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWR-LVLDTNLTGAFLGIRHAVPALLRRG-  128 (234)
T ss_dssp             TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHTTT-
T ss_pred             hceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhCC-
Confidence            68999999999998877764       6899999999754211      1122 6788999998755554    45556 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      .++||++||..++.+                        ..+...|+.+|...+.+++.++.+   .|++++++||+.+.
T Consensus       129 ~~~iv~isS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~  184 (234)
T 2ehd_A          129 GGTIVNVGSLAGKNP------------------------FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVD  184 (234)
T ss_dssp             CEEEEEECCTTTTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---
T ss_pred             CcEEEEECCchhcCC------------------------CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCc
Confidence            789999999864321                        123468999999999988887654   48999999999886


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      .+....        .       .      .       ...++..+|+|++++.++..+.
T Consensus       185 t~~~~~--------~-------~------~-------~~~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          185 TGFAGN--------T-------P------G-------QAWKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             -----------------------------------------CCHHHHHHHHHHHHHSCC
T ss_pred             CCcccc--------c-------c------c-------ccCCCCHHHHHHHHHHHhCCCc
Confidence            543110        0       0      0       0114679999999999987653

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.36  E-value=2.4e-12  Score=105.30  Aligned_cols=171  Identities=18%  Similarity=0.154  Sum_probs=114.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC----------CCccccchhHHHHHHHHHHHHHhcCC-
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS----------DDPETDMIKPAIQGVVNVLKACTKTK-   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~~~-   77 (293)
                      ++.++++|++|++++.++++       ++|+|||+||......          .+. +..++.|+.++.++++++...- 
T Consensus        59 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~~~  137 (280)
T 1xkq_A           59 QVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIY-HKTLKLNLQAVIEMTKKVKPHLV  137 (280)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHH-HHHHHHhhHHHHHHHHHHHHHhh
Confidence            68999999999998887765       6899999999754211          112 2678899999999998876431 


Q ss_pred             -CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           78 -TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        78 -~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                       +-.+||++||.....+.                       ..+...|+.+|...+.+.+.++.+   .|+++++++|+.
T Consensus       138 ~~~g~iv~isS~~~~~~~-----------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~  194 (280)
T 1xkq_A          138 ASKGEIVNVSSIVAGPQA-----------------------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGM  194 (280)
T ss_dssp             HHTCEEEEECCGGGSSSC-----------------------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred             cCCCcEEEecCccccCCC-----------------------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCc
Confidence             01699999998633211                       023458999999999999988754   489999999999


Q ss_pred             ccCCCCCCCC-Ccc----HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC---CCCC-cEEEec
Q 035985          154 MSGPSLTPDI-PSS----VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE---SASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~---~~~~-~y~~~~  223 (293)
                      +.++...... ...    .......+.. .  .   .       ...+.+++|+|++++.++..+   ...| .++++|
T Consensus       195 v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~--~---p-------~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdg  260 (280)
T 1xkq_A          195 VETGFTNAMGMPDQASQKFYNFMASHKE-C--I---P-------IGAAGKPEHIANIILFLADRNLSFYILGQSIVADG  260 (280)
T ss_dssp             BCSSHHHHTTCCHHHHHHHHHHHHHCTT-T--C---T-------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             CcCCcccccccccccccchHHHHHHHHc-C--C---C-------CCCCCCHHHHHHHHHHhcCcccccCccCCeEEECC
Confidence            9887421110 000    0001111100 0  0   0       234789999999999988754   2334 556754

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.36  E-value=1.5e-12  Score=107.30  Aligned_cols=183  Identities=15%  Similarity=0.108  Sum_probs=120.1

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--------CCccccchhHHHHHHHHHHHHHhcC---C
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--------DDPETDMIKPAIQGVVNVLKACTKT---K   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~   77 (293)
                      ++.++.+|++|++++.++++       ++|+|||+||......        .+. +..++.|+.++.++++++...   .
T Consensus        79 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~~~~~  157 (297)
T 1xhl_A           79 KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELY-QKTFKLNFQAVIEMTQKTKEHLIKT  157 (297)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHH-HHHHhHhhHHHHHHHHHHHHHHHhc
Confidence            68899999999998887765       7999999999754221        112 267889999999998887643   2


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                      + .+||++||.....+.                       ..+...|+.+|...+.+.+.++.+   .|+++++++|+.+
T Consensus       158 ~-g~IV~isS~~~~~~~-----------------------~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v  213 (297)
T 1xhl_A          158 K-GEIVNVSSIVAGPQA-----------------------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAV  213 (297)
T ss_dssp             T-CEEEEECCGGGSSSC-----------------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred             C-CEEEEEcCchhccCC-----------------------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCC
Confidence            1 699999998633211                       013358999999999999988754   4899999999999


Q ss_pred             cCCCCCCCC-CccH----HHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC---CCCC-cEEEe-cc
Q 035985          155 SGPSLTPDI-PSSV----ALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE---SASG-RYICC-AV  224 (293)
Q Consensus       155 ~G~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~---~~~~-~y~~~-~~  224 (293)
                      .++...... ....    ......+.. .  +   .       ...+..++|+|++++.++..+   ...| .++++ |.
T Consensus       214 ~T~~~~~~~~~~~~~~~~~~~~~~~~~-~--~---p-------~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~  280 (297)
T 1xhl_A          214 ATGFMGAMGLPETASDKLYSFIGSRKE-C--I---P-------VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGS  280 (297)
T ss_dssp             CSSHHHHTTCCHHHHHHHHHHHHHCTT-T--C---T-------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             cCccccccccccccccchHHHHHHHHh-c--C---C-------CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCc
Confidence            886321100 0000    000111000 0  0   0       234788999999999998754   3344 55674 44


Q ss_pred             CCCHHHHHHHHH
Q 035985          225 NTSVPELAKFLN  236 (293)
Q Consensus       225 ~~t~~e~~~~i~  236 (293)
                      ...+.+.+..+.
T Consensus       281 ~~~~~~~~~~~~  292 (297)
T 1xhl_A          281 TLVMGMQTHDLM  292 (297)
T ss_dssp             GGCCGGGGSCHH
T ss_pred             cccccccccchh
Confidence            555555443333

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.36  E-value=3.2e-12  Score=104.31  Aligned_cols=169  Identities=13%  Similarity=0.065  Sum_probs=115.3

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-----C-----CCCccccchhHHHHHHHHHHHHHhcCC-
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-----S-----SDDPETDMIKPAIQGVVNVLKACTKTK-   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-----~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-   77 (293)
                      ++.++++|++|++++.++++       ++|++||+||....     .     ..+. +..+++|+.++.++++++...- 
T Consensus        57 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~  135 (275)
T 2pd4_A           57 SPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAF-NTAMEISVYSLIELTNTLKPLLN  135 (275)
T ss_dssp             CCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHH-HHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             CcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHhc
Confidence            47899999999998887765       68999999997532     0     1112 2678899999999999998651 


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      +-.+||++||.....+.                        .+...|+.+|...+.+.+.++.+.   |+++++++|+.+
T Consensus       136 ~~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v  191 (275)
T 2pd4_A          136 NGASVLTLSYLGSTKYM------------------------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPI  191 (275)
T ss_dssp             EEEEEEEEECGGGTSBC------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC
T ss_pred             cCCEEEEEecchhcCCC------------------------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcc
Confidence            02589999997643211                        133589999999999999887764   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .++.....  .........+...   .+          ..-+.+.+|+|++++.++....  ..| .++++|.
T Consensus       192 ~T~~~~~~--~~~~~~~~~~~~~---~p----------~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg  249 (275)
T 2pd4_A          192 RTLASSGI--ADFRMILKWNEIN---AP----------LRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  249 (275)
T ss_dssp             CCTTGGGS--TTHHHHHHHHHHH---ST----------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccchhhhc--cccHHHHHHHHhc---CC----------cCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            88753211  0111111111110   00          1235679999999999887532  345 4566543

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.36  E-value=4.3e-12  Score=102.91  Aligned_cols=167  Identities=17%  Similarity=0.130  Sum_probs=112.2

Q ss_pred             EEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHH----hcCCCcc
Q 035985           18 KIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKAC----TKTKTVK   80 (293)
Q Consensus        18 ~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~   80 (293)
                      ..+.+|++|.+.+.++++       ++|++||+||.....      ..+.. ..+++|+.++.++++++    ++.+ ..
T Consensus        69 ~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-~g  146 (266)
T 3uxy_A           69 LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWS-LSLGVNVEAPFRICRAAIPLMAAAG-GG  146 (266)
T ss_dssp             EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CE
T ss_pred             hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-Cc
Confidence            445789999887776654       799999999976421      11122 67789999999999988    4445 57


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~  157 (293)
                      ++|++||...+.+                        ..+...|+.+|...+.+++.++.+.   |+++.+++|+.+.++
T Consensus       147 ~iv~isS~~~~~~------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~  202 (266)
T 3uxy_A          147 AIVNVASCWGLRP------------------------GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTP  202 (266)
T ss_dssp             EEEEECCSBTTBC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCH
T ss_pred             EEEEECCHHhCCC------------------------CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcch
Confidence            9999999864332                        1234589999999999999888764   899999999999875


Q ss_pred             CCCCC---CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          158 SLTPD---IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       158 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .....   ...........+....             -...+.+++|+|++++.++....  ..| .++++|
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~-------------p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 3uxy_A          203 MLRTGFAKRGFDPDRAVAELGRTV-------------PLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNG  261 (266)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHTTS-------------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HhhhhhhcccccchHHHHHHHhcC-------------CCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence            31100   0000000001111100             02457889999999999987653  234 567744

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.36  E-value=7e-12  Score=103.12  Aligned_cols=169  Identities=14%  Similarity=0.085  Sum_probs=114.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC----------CCCCccccchhHHHHHHHHHHHHHhcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF----------SSDDPETDMIKPAIQGVVNVLKACTKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~   77 (293)
                      +++.++++|++|.+++.++++       ++|++||+||....          ...+.. ..++.|+.++.++++++...-
T Consensus        81 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~m  159 (293)
T 3grk_A           81 GAFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFT-NTMLISVYSLTAVSRRAEKLM  159 (293)
T ss_dssp             TCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHT
T ss_pred             CCceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence            468899999999998887775       68999999997531          111122 678899999999999887531


Q ss_pred             -CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           78 -TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        78 -~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                       +..++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++.+++|+.
T Consensus       160 ~~~g~Iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~  215 (293)
T 3grk_A          160 ADGGSILTLTYYGAEKVM------------------------PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGP  215 (293)
T ss_dssp             TTCEEEEEEECGGGTSBC------------------------TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             cCCCEEEEEeehhhccCC------------------------CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCC
Confidence             13599999998644321                        123589999999999999888763   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      |..+......  ............   .+          ...+...+|+|++++.++....  ..| .++++|
T Consensus       216 v~T~~~~~~~--~~~~~~~~~~~~---~p----------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG  273 (293)
T 3grk_A          216 IKTLAASGIG--DFRYILKWNEYN---AP----------LRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADS  273 (293)
T ss_dssp             CCC------C--CHHHHHHHHHHH---ST----------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             Ccchhhhccc--chHHHHHHHHhc---CC----------CCCCCCHHHHHHHHHHHcCccccCCcceEEEECC
Confidence            9886432211  111111111111   00          1336779999999999887543  345 557754

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.36  E-value=1.3e-11  Score=100.35  Aligned_cols=168  Identities=17%  Similarity=0.152  Sum_probs=117.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC-CCcc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT-KTVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~   80 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      ++.. ..+++|+.++..+++++... .+..
T Consensus        81 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~m~~~g  159 (271)
T 3v2g_A           81 GRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFD-EVMAVNFRAPFVAIRSASRHLGDGG  159 (271)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHCCTTC
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhcCC
Confidence            478999999999998888775       7999999999754221      1122 67889999999999988754 1146


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~  157 (293)
                      ++|++||......                       +..+...|+.+|...+.+.+.++.+.   |+++.+++|+.|.++
T Consensus       160 ~iv~isS~~~~~~-----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~  216 (271)
T 3v2g_A          160 RIITIGSNLAELV-----------------------PWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTD  216 (271)
T ss_dssp             EEEEECCGGGTCC-----------------------CSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSS
T ss_pred             EEEEEeChhhccC-----------------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCC
Confidence            8999998643221                       11234689999999999999887764   899999999999887


Q ss_pred             CCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          158 SLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ...... .....+..   ..    +          ...+...+|+|++++.++....  ..| .++++|.
T Consensus       217 ~~~~~~-~~~~~~~~---~~----~----------~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  268 (271)
T 3v2g_A          217 MNPADG-DHAEAQRE---RI----A----------TGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG  268 (271)
T ss_dssp             SSCSSC-SSHHHHHH---TC----T----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccccc-hhHHHHHh---cC----C----------CCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence            543321 11111111   10    0          1235679999999999886543  334 5566543

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.35  E-value=3.4e-12  Score=103.58  Aligned_cols=169  Identities=16%  Similarity=0.096  Sum_probs=115.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      ++. +..++.|+.++..+++++...    +
T Consensus        70 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~  148 (266)
T 4egf_A           70 TDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLF-DATIAVNLRAPALLASAVGKAMVAAG  148 (266)
T ss_dssp             CCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            479999999999998887765       7999999999764221      112 267889999999998887532    2


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      ...++|++||...+.+                        ......|+.+|...+.+.+.++.+.   |+++..++|+.|
T Consensus       149 ~~g~iv~isS~~~~~~------------------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v  204 (266)
T 4egf_A          149 EGGAIITVASAAALAP------------------------LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVV  204 (266)
T ss_dssp             SCEEEEEECCGGGTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCB
T ss_pred             CCeEEEEEcchhhccC------------------------CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCC
Confidence            1358999999864332                        1234589999999999999887763   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ..+....... . ......+....   +          ...+..++|+|++++.++....  ..| .++++|
T Consensus       205 ~T~~~~~~~~-~-~~~~~~~~~~~---p----------~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 4egf_A          205 LTEMGQRVWG-D-EAKSAPMIARI---P----------LGRFAVPHEVSDAVVWLASDAASMINGVDIPVDG  261 (266)
T ss_dssp             CSHHHHHHTC-S-HHHHHHHHTTC---T----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCchhhhhcc-C-hHHHHHHHhcC---C----------CCCCcCHHHHHHHHHHHhCchhcCccCcEEEECC
Confidence            7753110000 0 01111111110   0          2346789999999999887543  334 557754

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.35  E-value=1.3e-12  Score=107.88  Aligned_cols=161  Identities=17%  Similarity=0.093  Sum_probs=108.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++++|++|.+++.++++       ++|+|||+||.....      ..+.. ..+++|+.++.++++++..    .+
T Consensus        80 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~  158 (301)
T 3tjr_A           80 FDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWR-WVIDIDLWGSIHAVEAFLPRLLEQG  158 (301)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHC
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHH-HHHHhhhHHHHHHHHHHHHHHHhcC
Confidence            478999999999998888775       789999999976421      11122 6888999999999988743    22


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      ...+||++||...+.+.                        .....|+.+|...+.+.+.++.+.   |+++++++|+.|
T Consensus       159 ~~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v  214 (301)
T 3tjr_A          159 TGGHIAFTASFAGLVPN------------------------AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVV  214 (301)
T ss_dssp             SCEEEEEECCGGGTSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCC
T ss_pred             CCcEEEEeCchhhcCCC------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcc
Confidence            23689999998744321                        234589999999999998887654   899999999998


Q ss_pred             cCCCCCCCCCccHHHHHHH------HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          155 SGPSLTPDIPSSVALAATL------ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ..+..        ......      ....+..... .    ......+++++|+|++++.++..+
T Consensus       215 ~T~~~--------~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          215 ETKLV--------SNSERIRGADYGMSATPEGAFG-P----LPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             CSSHH--------HHHHHHC---------------------------CCCHHHHHHHHHHHHHHT
T ss_pred             ccccc--------cccccccchhhccccChhhhcc-c----cccccCCCCHHHHHHHHHHHHhcC
Confidence            76421        111000      0000000000 0    012356899999999999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.35  E-value=1.5e-12  Score=106.36  Aligned_cols=178  Identities=22%  Similarity=0.192  Sum_probs=117.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++.++.+|++|++++.++++       ++|++||+||......      ++.. ..+++|+.++.++++++..    .+
T Consensus        73 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~~  151 (277)
T 3tsc_A           73 RRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFR-DVMDINVTGTWNTVMAGAPRIIEGG  151 (277)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHhHHHHHHHHHHHHHHHHhcC
Confidence            578999999999998887764       5899999999764321      1122 6789999999999887643    22


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      +-.+||++||...+.+.                        .....|+.+|...+.+.+.++.+.   |+++..++|+.+
T Consensus       152 ~~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v  207 (277)
T 3tsc_A          152 RGGSIILISSAAGMKMQ------------------------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPV  207 (277)
T ss_dssp             SCEEEEEECCGGGTSCC------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             CCCEEEEEccHhhCCCC------------------------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCC
Confidence            13589999998643321                        223589999999999999888764   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ..+....   .............+........    ....-+.+.+|+|++++.++....  ..| .++++|.
T Consensus       208 ~T~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  273 (277)
T 3tsc_A          208 NTPMGSG---DMVTAVGQAMETNPQLSHVLTP----FLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQG  273 (277)
T ss_dssp             SSGGGSH---HHHHHHHHHHHTCGGGTTTTCC----SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCcccc---hhhhhhhhcccccHHHHHHhhh----ccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence            8764321   0011111111111111111010    001237899999999999987543  334 5567553

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.35  E-value=5.3e-12  Score=103.48  Aligned_cols=165  Identities=16%  Similarity=0.201  Sum_probs=113.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-C------CCCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-S------SDDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .++.++++|++|++++.++++       ++|++||+||.... .      .++.. ..+++|+.++.++++++.    +.
T Consensus        87 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~  165 (287)
T 3rku_A           87 AKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQ-DVFDTNVTALINITQAVLPIFQAK  165 (287)
T ss_dssp             CEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            468899999999999988875       58999999997531 1      11122 678899999999999883    44


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                      + ..+||++||.....+.                        .....|+.+|...+.+.+.++.+   .|+++.+++|+.
T Consensus       166 ~-~g~IV~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~  220 (287)
T 3rku_A          166 N-SGDIVNLGSIAGRDAY------------------------PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGL  220 (287)
T ss_dssp             T-CCEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESC
T ss_pred             C-CCeEEEECChhhcCCC------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCc
Confidence            4 5799999998643321                        23458999999999999999887   489999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC---CCcEEEe
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA---SGRYICC  222 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~---~~~y~~~  222 (293)
                      |..+.................          .       ....+..+|+|++++.++..+..   +..++++
T Consensus       221 v~T~~~~~~~~~~~~~~~~~~----------~-------~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~  275 (287)
T 3rku_A          221 VETEFSLVRYRGNEEQAKNVY----------K-------DTTPLMADDVADLIVYATSRKQNTVIADTLIFP  275 (287)
T ss_dssp             EESSHHHHHTTTCHHHHHHHH----------T-------TSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEE
T ss_pred             CcCccccccccCcHHHHHHhh----------c-------ccCCCCHHHHHHHHHHHhCCCCCeEecceEEee
Confidence            976521000000000000000          0       12234799999999999987643   2345543

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.35  E-value=1.4e-11  Score=101.01  Aligned_cols=177  Identities=23%  Similarity=0.226  Sum_probs=116.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-------CCccccchhHHHHHHHHHHHHHhcC----
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-------DDPETDMIKPAIQGVVNVLKACTKT----   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~----   76 (293)
                      .++.++++|++|++++.++++       ++|++||+||......       ++.. ..+++|+.++.++++++...    
T Consensus        76 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~  154 (286)
T 3uve_A           76 RRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWT-EMIDINLAGVWKTVKAGVPHMIAG  154 (286)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhC
Confidence            578999999999998888775       7999999999754221       1122 67889999999999887532    


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                      ++..++|++||...+.+.                        .....|+.+|...+.+.+.++.+   .|+++..++|+.
T Consensus       155 ~~~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~  210 (286)
T 3uve_A          155 GRGGSIILTSSVGGLKAY------------------------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTH  210 (286)
T ss_dssp             TSCEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred             CCCcEEEEECchhhccCC------------------------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCc
Confidence            213589999998644321                        23358999999999999988776   489999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcc----c-ccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDF----L-LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      |..+.....  .....+.........    . .....     .....+.+.+|+|++++.++....  ..| .++++|
T Consensus       211 v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG  281 (286)
T 3uve_A          211 VKTPMLHNE--GTFKMFRPDLENPGPDDMAPICQMFH-----TLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDA  281 (286)
T ss_dssp             BSSTTTSSH--HHHHHHCTTSSSCCHHHHHHHHHTTC-----SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccCCccccc--chhhhccccccccchhhHHHHHHhhh-----ccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECC
Confidence            988754320  000000000000000    0 00000     001457889999999999987543  334 557754

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.35  E-value=2.8e-12  Score=104.88  Aligned_cols=158  Identities=18%  Similarity=0.165  Sum_probs=106.8

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHH----HHHHHHHHhcCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQG----VVNVLKACTKTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~----~~~l~~~~~~~~~   78 (293)
                      ++.++.+|++|++++.++++       ++|+|||+||......      .+. ...++.|+.+    +..++..+++.+ 
T Consensus        84 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~~~~~~l~~~~~~~-  161 (279)
T 1xg5_A           84 TLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGW-KDMFNVNVLALSICTREAYQSMKERN-  161 (279)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHTT-
T ss_pred             eEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            57889999999998887775       7999999999754211      112 2678899999    666777777766 


Q ss_pred             c--cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-----CCceEEEEcc
Q 035985           79 V--KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-----NNIDLITVIP  151 (293)
Q Consensus        79 ~--~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-----~~~~~~ilR~  151 (293)
                      .  .+||++||..++...                      +..+...|+.+|...+.+++.++.+     .++++++++|
T Consensus       162 ~~~g~iv~isS~~~~~~~----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~P  219 (279)
T 1xg5_A          162 VDDGHIININSMSGHRVL----------------------PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISP  219 (279)
T ss_dssp             CCSCEEEEECCGGGTSCC----------------------SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred             CCCceEEEEcChhhcccC----------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEec
Confidence            4  799999998632100                      1123458999999999998887654     4799999999


Q ss_pred             CCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          152 SLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       152 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      +.+.++...           .........+.. .     .....+++++|+|++++.++..+.
T Consensus       220 g~v~t~~~~-----------~~~~~~~~~~~~-~-----~~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          220 GVVETQFAF-----------KLHDKDPEKAAA-T-----YEQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             SCBCSSHHH-----------HHTTTCHHHHHH-H-----HC---CBCHHHHHHHHHHHHHSCT
T ss_pred             Ccccchhhh-----------hhcccChhHHhh-h-----cccccCCCHHHHHHHHHHHhcCCc
Confidence            998765310           000000000000 0     002346889999999999998653

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.35  E-value=6.3e-12  Score=102.98  Aligned_cols=173  Identities=17%  Similarity=0.120  Sum_probs=115.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC--CCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT--KTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~   79 (293)
                      .++.++.+|++|.+++.++++       ++|+|||+||.....      ..+.. ..++.|+.++.++++++...  + .
T Consensus        79 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~-~  156 (283)
T 1g0o_A           79 SDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFD-RVFTINTRGQFFVAREAYKHLEI-G  156 (283)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHSCT-T
T ss_pred             CCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHhc-C
Confidence            468899999999988877654       689999999976421      11122 67899999999999998765  4 5


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      .+||++||.....+..                       .+...|+.+|...+.+++.++.+   .|+++++++|+.+.+
T Consensus       157 g~iv~isS~~~~~~~~-----------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  213 (283)
T 1g0o_A          157 GRLILMGSITGQAKAV-----------------------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKT  213 (283)
T ss_dssp             CEEEEECCGGGTCSSC-----------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSS
T ss_pred             CeEEEEechhhccCCC-----------------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccc
Confidence            7999999976332111                       12458999999999999988765   389999999999987


Q ss_pred             CCCCC-------CCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          157 PSLTP-------DIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       157 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +....       ............+... .   ...       ...+.+.+|+|++++.++....  ..| .+.++|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~p-------~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdg  279 (283)
T 1g0o_A          214 DMYHAVCREYIPNGENLSNEEVDEYAAV-Q---WSP-------LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDG  279 (283)
T ss_dssp             HHHHHHGGGGSTTCTTCCHHHHHHHHHH-H---SCT-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhhhhhhhccccccccCHHHHHHHHhh-c---CCC-------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            53110       0000000011111000 0   000       1336789999999999987543  334 456654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.34  E-value=2e-11  Score=100.68  Aligned_cols=174  Identities=21%  Similarity=0.211  Sum_probs=116.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--C--C--ccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--D--D--PETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~--~--~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||......  .  +  ..+..+++|+.++..+++++...    +
T Consensus        89 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~  168 (299)
T 3t7c_A           89 RRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGK  168 (299)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            578999999999998887775       6999999999764221  1  1  11268899999999999886532    2


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      +..+||++||...+.+.                        .....|+.+|...+.+.+.++.+.   |+++..++|+.|
T Consensus       169 ~~g~Iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v  224 (299)
T 3t7c_A          169 RGGSIVFTSSIGGLRGA------------------------ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSV  224 (299)
T ss_dssp             SCEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCB
T ss_pred             CCcEEEEECChhhccCC------------------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCc
Confidence            24799999998644321                        234589999999999999888764   899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCc--ccc-------cccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEe
Q 035985          155 SGPSLTPDIPSSVALAATLITGND--FLL-------NGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICC  222 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~  222 (293)
                      ..+.....     .. ........  ...       ....     .....+...+|+|++++.++....  ..| .++++
T Consensus       225 ~T~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vd  293 (299)
T 3t7c_A          225 ATPMLLNE-----PT-YRMFRPDLENPTVEDFQVASRQMH-----VLPIPYVEPADISNAILFLVSDDARYITGVSLPVD  293 (299)
T ss_dssp             SSTTTSSH-----HH-HHHHCTTSSSCCHHHHHHHHHHHS-----SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred             cCcccccc-----ch-hhhhhhhhccchhhHHHHHhhhhc-----ccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeC
Confidence            88754320     00 00000000  000       0000     001347789999999999987543  334 55675


Q ss_pred             c
Q 035985          223 A  223 (293)
Q Consensus       223 ~  223 (293)
                      |
T Consensus       294 G  294 (299)
T 3t7c_A          294 G  294 (299)
T ss_dssp             T
T ss_pred             C
Confidence            4

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.34  E-value=1e-11  Score=101.31  Aligned_cols=168  Identities=18%  Similarity=0.157  Sum_probs=112.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      ++.++++|++|++++.++++       ++|+|||+||.....      ..+.. ..++.|+.++.++++++.    +.+.
T Consensus        78 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~~  156 (276)
T 2b4q_A           78 DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWE-KVMQLNVTSVFSCIQQLLPLLRRSAS  156 (276)
T ss_dssp             CEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHH-HHHHHHTHHHHHHHHHHHHHHHHHCC
T ss_pred             ceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhccC
Confidence            68889999999998887765       689999999975421      11122 678899999988887764    2331


Q ss_pred             ---ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCc-hhHHHHHHHHHHHHHHHHh---CCceEEEEcc
Q 035985           79 ---VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTW-GYAASKTLAERAACKFAQE---NNIDLITVIP  151 (293)
Q Consensus        79 ---~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~-~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~  151 (293)
                         ..+||++||...+.+.+                        ... .|+.+|...+.+.+.++.+   .|+++++++|
T Consensus       157 ~~~~g~iV~isS~~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~P  212 (276)
T 2b4q_A          157 AENPARVINIGSVAGISAMG------------------------EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAP  212 (276)
T ss_dssp             SSSCEEEEEECCGGGTCCCC------------------------CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCCCEEEEECCHHHcCCCC------------------------CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEe
Confidence               27999999986433211                        123 7999999999999988765   3899999999


Q ss_pred             CCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          152 SLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       152 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +.+..+....    ........+... ...+          ...+.+++|+|++++.++..+.  ..| .+.++|
T Consensus       213 G~v~T~~~~~----~~~~~~~~~~~~-~~~p----------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  272 (276)
T 2b4q_A          213 GRFPSRMTRH----IANDPQALEADS-ASIP----------MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDG  272 (276)
T ss_dssp             CCCCSTTTHH----HHHCHHHHHHHH-HTST----------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccCcCcchhh----cchhHHHHHHhh-cCCC----------CCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence            9998764211    000001111100 0000          1347889999999999987642  334 456654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.34  E-value=1.1e-11  Score=100.74  Aligned_cols=174  Identities=18%  Similarity=0.167  Sum_probs=114.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc---CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCCccE
Q 035985           15 GELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~   81 (293)
                      ..+..+.+|+++++.+.++++   ++|++||+||......      .+. +..++.|+.++..+++++.    +.+ ..+
T Consensus        61 ~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~  138 (267)
T 3t4x_A           61 AILQPVVADLGTEQGCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDW-FKLFEVNIMSGVRLTRSYLKKMIERK-EGR  138 (267)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHTT-EEE
T ss_pred             ceEEEEecCCCCHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhCC-CCE
Confidence            457889999999998888775   7999999999764221      112 2568899999877766654    445 679


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~  158 (293)
                      +|++||...+.+                        ..+...|+.+|...+.+.+.++.+.   ++++..+.|+.+..+.
T Consensus       139 iv~isS~~~~~~------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~  194 (267)
T 3t4x_A          139 VIFIASEAAIMP------------------------SQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG  194 (267)
T ss_dssp             EEEECCGGGTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHH
T ss_pred             EEEEcchhhccC------------------------CCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCcc
Confidence            999999864332                        1234689999999999999998765   6999999999887652


Q ss_pred             CCC-------CCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          159 LTP-------DIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       159 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ...       .................  .+..       -...+.+++|+|++++.++....  ..| .++++|
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG  260 (267)
T 3t4x_A          195 VETMLNSLYPNEQLTIEEAEKRFMKEN--RPTS-------IIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDG  260 (267)
T ss_dssp             HHHHHHHSSTTSCCCHHHHHHHHHHHH--CTTC-------SSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhhcCcccCCCHHHHHHHHhhcc--CCcc-------cccCccCHHHHHHHHHHHcCccccCccCCeEEECC
Confidence            100       00000000101000000  0000       02457889999999999887543  334 567754

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.34  E-value=2.2e-12  Score=104.14  Aligned_cols=187  Identities=13%  Similarity=0.099  Sum_probs=108.1

Q ss_pred             EecCCCCCcchhhhhc----CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHh----cCCCccEEEEecccchh
Q 035985           20 FRADLTDEASFDAPIS----RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACT----KTKTVKRVILTSSAAAV   91 (293)
Q Consensus        20 v~~Dl~d~~~~~~~~~----~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~   91 (293)
                      +++|++|++++.++++    ++|+|||+||..... .... ..+++|+.++.++++++.    +.+ ..+||++||...+
T Consensus        42 ~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~~-~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~  118 (257)
T 1fjh_A           42 LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT-KVLG-NVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASA  118 (257)
T ss_dssp             TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTC-SSHH-HHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGG
T ss_pred             cccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCCc-ccHH-HHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhh
Confidence            4578888888888875    459999999975411 2244 899999999999998885    444 6899999998754


Q ss_pred             cccccCC-CCccccCCCCCchhh--h-ccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCCCCCCCC
Q 035985           92 SINAQNV-TGLVMDEKNWTDVEF--L-SSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPSLTPDIP  164 (293)
Q Consensus        92 ~~~~~~~-~~~~~~E~~~~~~~~--~-~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~  164 (293)
                      ....... ....+.+..+.....  . ..+..+...|+.+|...+.+++.++.+   .|+++++++|+.+.++.......
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  198 (257)
T 1fjh_A          119 HLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ  198 (257)
T ss_dssp             SSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------
T ss_pred             ccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhcc
Confidence            2211100 000000010000000  0 001123468999999999999988765   58999999999998875322100


Q ss_pred             ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC--CCCC-cEEEec
Q 035985          165 SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE--SASG-RYICCA  223 (293)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~--~~~~-~y~~~~  223 (293)
                         ..........   + ...       ...+.+++|+|++++.++..+  ...| .+.++|
T Consensus       199 ---~~~~~~~~~~---~-~~~-------~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdg  246 (257)
T 1fjh_A          199 ---DPRYGESIAK---F-VPP-------MGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDG  246 (257)
T ss_dssp             ----------------C-CCS-------TTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             ---chhHHHHHHh---c-ccc-------cCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECC
Confidence               0000000000   0 000       124788999999999998765  2345 456654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.34  E-value=8.6e-12  Score=100.37  Aligned_cols=165  Identities=21%  Similarity=0.225  Sum_probs=111.3

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC------CCCCccccchhHHHHHHHHHHHHHhc----CCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF------SSDDPETDMIKPAIQGVVNVLKACTK----TKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~   78 (293)
                      .+.++++|++|++++.++++       .+|++||+||....      ...+.. ..++.|+.++.++++++..    .+ 
T Consensus        60 ~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~m~~~~-  137 (253)
T 2nm0_A           60 GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFT-SVVETNLTGTFRVVKRANRAMLRAK-  137 (253)
T ss_dssp             TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTH-HHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            47889999999998887765       47999999997532      222344 7889999999999887653    34 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..+||++||.....+.+                        ....|+.+|...+.+.+.++.+   .++++++++|+.+.
T Consensus       138 ~g~iv~isS~~~~~~~~------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~  193 (253)
T 2nm0_A          138 KGRVVLISSVVGLLGSA------------------------GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVD  193 (253)
T ss_dssp             CEEEEEECCCCCCCCHH------------------------HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBC
T ss_pred             CCEEEEECchhhCCCCC------------------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCc
Confidence            57999999976432211                        1248999999999999988765   37999999999987


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .+.....    .......+...   .   .       ...++..+|+|++++.++..+.  ..| .+.++|
T Consensus       194 T~~~~~~----~~~~~~~~~~~---~---p-------~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdG  247 (253)
T 2nm0_A          194 TDMTKVL----TDEQRANIVSQ---V---P-------LGRYARPEEIAATVRFLASDDASYITGAVIPVDG  247 (253)
T ss_dssp             C-------------CHHHHHTT---C---T-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             Ccchhhc----CHHHHHHHHhc---C---C-------CCCCcCHHHHHHHHHHHhCccccCCcCcEEEECC
Confidence            6542110    00000111110   0   0       1347889999999999987643  344 456654

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.34  E-value=8.6e-12  Score=100.44  Aligned_cols=170  Identities=16%  Similarity=0.142  Sum_probs=111.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++++|++|++++.++++       .+|+|||+||......      .+.. ..++.|+.++..+.+++    ++.+
T Consensus        52 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~~~~~~~~~~~~~~  130 (253)
T 1hxh_A           52 ERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFS-RLLKINTESVFIGCQQGIAAMKETG  130 (253)
T ss_dssp             TTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHTTTC
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHhhcHHHHHHHHHHHHHHHHcC
Confidence            468899999999998887765       4799999999754211      1122 67888988877666544    4444


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-----CceEEEEccC
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-----NIDLITVIPS  152 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-----~~~~~ilR~~  152 (293)
                        .+||++||...+.+                        ..+...|+.+|...+.+++.++.+.     +++++++||+
T Consensus       131 --g~iv~isS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg  184 (253)
T 1hxh_A          131 --GSIINMASVSSWLP------------------------IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPD  184 (253)
T ss_dssp             --EEEEEECCGGGTSC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEES
T ss_pred             --CEEEEEcchhhcCC------------------------CCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence              79999999864321                        1234589999999999999887653     8999999999


Q ss_pred             CccCCCCCCCC-CccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          153 LMSGPSLTPDI-PSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       153 ~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .++++...... .....   ..+.....   ...       ...+.+++|+|++++.++..+.  ..| .+.++|.
T Consensus       185 ~v~t~~~~~~~~~~~~~---~~~~~~~~---~~p-------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          185 GIYTPMMQASLPKGVSK---EMVLHDPK---LNR-------AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             EECCHHHHHHSCTTCCH---HHHBCBTT---TBT-------TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CccCchhhhccchhhhH---HHHhhhhc---cCc-------cCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            99886321000 00000   00111000   000       2347899999999999987643  334 4566554

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.33  E-value=2.5e-12  Score=107.07  Aligned_cols=167  Identities=16%  Similarity=0.077  Sum_probs=102.9

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcCC-----
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKTK-----   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~-----   77 (293)
                      ++.++.+|++|++++.++++       ++|+|||+||......      .+.. ..+++|+.|+.++++++....     
T Consensus        60 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~~  138 (319)
T 3ioy_A           60 EVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWD-WLLGVNLHGVVNGVTTFVPRMVERVK  138 (319)
T ss_dssp             GEEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHhhh
Confidence            78999999999998888775       5799999999754221      1122 688999999999988876431     


Q ss_pred             ----CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEc
Q 035985           78 ----TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVI  150 (293)
Q Consensus        78 ----~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR  150 (293)
                          +..+||++||..++.+.+                        ....|+.+|...+.+.+.++.+   .|+++++++
T Consensus       139 ~~~~~~g~iV~isS~a~~~~~~------------------------~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~  194 (319)
T 3ioy_A          139 AGEQKGGHVVNTASMAAFLAAG------------------------SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLC  194 (319)
T ss_dssp             TTSCCCCEEEEECCGGGTCCCS------------------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEC
T ss_pred             ccCCCCcEEEEecccccccCCC------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEE
Confidence                135799999987543221                        2358999999777666665543   389999999


Q ss_pred             cCCccCCCCCCCCCccHHHHHHHHhCCc-ccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          151 PSLMSGPSLTPDIPSSVALAATLITGND-FLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       151 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      |+.|.++........ ...+........ ..+....     ......++++|+|+.++.+++.+
T Consensus       195 PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          195 PGLVKSYIYASDDIR-PDALKGEVKPVDKTAVERLA-----GVHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             CCCBC------------------------------C-----CGGGSSBCHHHHHHHHHHHHHTT
T ss_pred             cCeEccCcccccccC-chhhcccccchhHHHHHHHH-----HhhhcCCCHHHHHHHHHHHHHcC
Confidence            999987653321100 000000000000 0000000     00112278999999999999875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.33  E-value=5.4e-12  Score=102.61  Aligned_cols=172  Identities=16%  Similarity=0.150  Sum_probs=115.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcCC-Ccc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKTK-TVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~   80 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      ++.. ..+++|+.++.++++++...- +-.
T Consensus        68 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~g  146 (270)
T 3is3_A           68 SDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFD-RVFSLNTRGQFFVAREAYRHLTEGG  146 (270)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHCCTTC
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhcCC
Confidence            578999999999998887775       6899999999764221      1222 678999999999999887652 124


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~  157 (293)
                      ++|++||..... .                      +..+...|+.+|...+.+.+.++.+   .|+++..++|+.+..+
T Consensus       147 ~iv~isS~~~~~-~----------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~  203 (270)
T 3is3_A          147 RIVLTSSNTSKD-F----------------------SVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTD  203 (270)
T ss_dssp             EEEEECCTTTTT-C----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCST
T ss_pred             eEEEEeCchhcc-C----------------------CCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccCh
Confidence            899999975111 0                      1123468999999999999998876   3899999999999876


Q ss_pred             CCCCC-------C-CccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          158 SLTPD-------I-PSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       158 ~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .....       . .............. .  +          ...+.+++|+|++++.++....  ..| .++++|
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--p----------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  267 (270)
T 3is3_A          204 MFHEVSHHYIPNGTSYTAEQRQQMAAHA-S--P----------LHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDG  267 (270)
T ss_dssp             THHHHGGGGSTTGGGSCHHHHHHHHHHH-S--T----------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hhhhhhhhccccccccchHHHHHHHHhc-C--C----------CCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCC
Confidence            42100       0 00001111111100 0  0          2346789999999999987543  334 456654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.33  E-value=1.9e-12  Score=105.44  Aligned_cols=146  Identities=15%  Similarity=0.091  Sum_probs=107.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||......      .+.. ..++.|+.++.++++++.    +.+
T Consensus        80 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~  158 (272)
T 1yb1_A           80 AKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIE-KTFEVNVLAHFWTTKAFLPAMTKNN  158 (272)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            478999999999998887765       7899999999764221      1122 678899999887777664    445


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC------CceEEEEcc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN------NIDLITVIP  151 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~------~~~~~ilR~  151 (293)
                       ..+||++||..++.+.+                        +...|+.+|...+.+++.++.+.      +++++++||
T Consensus       159 -~~~iv~isS~~~~~~~~------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~P  213 (272)
T 1yb1_A          159 -HGHIVTVASAAGHVSVP------------------------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCP  213 (272)
T ss_dssp             -CEEEEEECCCC-CCCHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEE
T ss_pred             -CCEEEEEechhhcCCCC------------------------CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeC
Confidence             68999999986433211                        23489999999999999887653      799999999


Q ss_pred             CCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          152 SLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       152 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +.+.++....               ...     .       ...+++++|+|++++.++..+
T Consensus       214 g~v~t~~~~~---------------~~~-----~-------~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          214 NFVNTGFIKN---------------PST-----S-------LGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             THHHHCSTTC---------------THH-----H-------HCCCCCHHHHHHHHHHHHHTT
T ss_pred             CcccCCcccc---------------ccc-----c-------ccCCCCHHHHHHHHHHHHHcC
Confidence            9988764211               000     0       134678999999999999865

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.33  E-value=5.5e-12  Score=101.78  Aligned_cols=175  Identities=18%  Similarity=0.172  Sum_probs=113.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||.....      ..+.. ..++.|+.++.++++++...    +
T Consensus        51 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~  129 (256)
T 1geg_A           51 GHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVD-KVYNINVKGVIWGIQAAVEAFKKEG  129 (256)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC
Confidence            468899999999998888776       799999999975321      01122 57889999998888777542    2


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                      ...++|++||...+++.                        .....|+.+|...+.+.+.++.+   .|+++++++|+.+
T Consensus       130 ~~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v  185 (256)
T 1geg_A          130 HGGKIINACSQAGHVGN------------------------PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIV  185 (256)
T ss_dssp             SCEEEEEECCGGGTSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             CCCEEEEECchhhcCCC------------------------CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCC
Confidence            13699999998644321                        12358999999999999988765   3899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhC--Cccccc-ccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITG--NDFLLN-GLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .++....    ....+.. ..+  ...... ....    .-...+.+.+|+|++++.++..+.  ..| .+.++|
T Consensus       186 ~t~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~----~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  251 (256)
T 1geg_A          186 KTPMWAE----IDRQVSE-AAGKPLGYGTAEFAKR----ITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDG  251 (256)
T ss_dssp             SSHHHHH----HHHHHHH-HHTCCTTHHHHHHHTT----CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             ccchhhh----hhhhccc-cccCChHHHHHHHHhc----CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence            8753110    0000000 000  000000 0000    001347899999999999887542  334 456644

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.32  E-value=1.1e-11  Score=101.46  Aligned_cols=169  Identities=19%  Similarity=0.108  Sum_probs=113.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecc-cCCCCC--------CCc--cccchhHHHHHHHHHHHHHhcC-
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVAT-PVNFSS--------DDP--ETDMIKPAIQGVVNVLKACTKT-   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~-~~~~~~--------~~~--~~~~~~~n~~~~~~l~~~~~~~-   76 (293)
                      .++.++++|++|.+++.++++      ++|++||+|+ ......        .+.  ....++.|+.++.++++++... 
T Consensus        76 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  155 (281)
T 3ppi_A           76 NRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASI  155 (281)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            478999999999998888775      5899999944 322110        010  1377889999999998877521 


Q ss_pred             --------CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---Cce
Q 035985           77 --------KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NID  145 (293)
Q Consensus        77 --------~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~  145 (293)
                              +.-.+||++||...+.+.                        .....|+.+|...+.+++.++.+.   |++
T Consensus       156 ~~~~~~~~~~~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~  211 (281)
T 3ppi_A          156 AAAEPRENGERGALVLTASIAGYEGQ------------------------IGQTAYAAAKAGVIGLTIAAARDLSSAGIR  211 (281)
T ss_dssp             HTSCCCTTSCCEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HhhcccccCCCeEEEEEecccccCCC------------------------CCCcccHHHHHHHHHHHHHHHHHHhhcCeE
Confidence                    114589999998744321                        234589999999999998887664   899


Q ss_pred             EEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEec
Q 035985          146 LITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICCA  223 (293)
Q Consensus       146 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~~  223 (293)
                      +.+++|+.|..+.....    .............            ....+.+++|+|++++.++++....| .++++|
T Consensus       212 v~~v~PG~v~T~~~~~~----~~~~~~~~~~~~~------------~~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdG  274 (281)
T 3ppi_A          212 VNTIAPGTMKTPIMESV----GEEALAKFAANIP------------FPKRLGTPDEFADAAAFLLTNGYINGEVMRLDG  274 (281)
T ss_dssp             EEEEEECSBCCHHHHTT----CHHHHHHHHHTCC------------SSSSCBCHHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             EEEEecCcCCchhhhcc----cHHHHHHHHhcCC------------CCCCCCCHHHHHHHHHHHHcCCCcCCcEEEECC
Confidence            99999999876422110    0111111111110            01447889999999999998766566 456644

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.32  E-value=1.1e-11  Score=100.61  Aligned_cols=170  Identities=18%  Similarity=0.188  Sum_probs=113.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCc---cccchhHHHHHHHHHHHHHhcCC-CccE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDP---ETDMIKPAIQGVVNVLKACTKTK-TVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~---~~~~~~~n~~~~~~l~~~~~~~~-~~~~   81 (293)
                      .++.++++|++|++++.++++       ++|++||+||......  ...   .+..+++|+.++.++++++...- +-.+
T Consensus        77 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~  156 (267)
T 3u5t_A           77 GKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGR  156 (267)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCe
Confidence            478999999999998888775       6899999999764221  111   12667799999999998886541 1358


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~  158 (293)
                      +|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..+.|+.+..+.
T Consensus       157 iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  212 (267)
T 3u5t_A          157 IINMSTSQVGLLH------------------------PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDL  212 (267)
T ss_dssp             EEEECCTHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---
T ss_pred             EEEEeChhhccCC------------------------CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcc
Confidence            9999998643321                        123589999999999999998875   7999999999997764


Q ss_pred             CCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          159 LTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ......   ......+....      .       ...+..++|+|++++.++....  ..| .+.++|.
T Consensus       213 ~~~~~~---~~~~~~~~~~~------p-------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          213 FLEGKS---DEVRDRFAKLA------P-------LERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             -----------CHHHHHTSS------T-------TCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred             ccccCC---HHHHHHHHhcC------C-------CCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            221100   00011111110      0       2346789999999999887543  245 4466553

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.32  E-value=1e-11  Score=99.43  Aligned_cols=165  Identities=21%  Similarity=0.159  Sum_probs=113.3

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhc----CCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTK----TKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~----~~~   78 (293)
                      ++.++++|++|++++.++++       ++|++||+||......      .+. +..++.|+.++.++++++..    .+ 
T Consensus        50 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~m~~~~-  127 (245)
T 1uls_A           50 GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDW-ELVLRVNLTGSFLVAKAASEAMREKN-  127 (245)
T ss_dssp             TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHH-HHHHHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence            37889999999998887765       4899999999754211      112 26788999999999887753    34 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..+||++||.. .++.+                        ....|+.+|...+.+.+.++.+   .|+++++++|+.+.
T Consensus       128 ~g~iv~isS~~-~~~~~------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  182 (245)
T 1uls_A          128 PGSIVLTASRV-YLGNL------------------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIE  182 (245)
T ss_dssp             CEEEEEECCGG-GGCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CCEEEEEccch-hcCCC------------------------CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCc
Confidence            67999999986 44321                        2358999999999998888765   38999999999997


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .+.... ..   ..........   .+          ...+.+.+|+|++++.++....  ..| .+.++|.
T Consensus       183 t~~~~~-~~---~~~~~~~~~~---~p----------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  237 (245)
T 1uls_A          183 TRMTAK-VP---EKVREKAIAA---TP----------LGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGG  237 (245)
T ss_dssp             CTTTSS-SC---HHHHHHHHHT---CT----------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             Ccchhh-cC---HHHHHHHHhh---CC----------CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            764321 11   1111111111   00          1236789999999999887543  334 4566543

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.32  E-value=2.3e-12  Score=103.73  Aligned_cols=157  Identities=12%  Similarity=-0.002  Sum_probs=102.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++.++++|++|++++.++++      ++|++||+||......      .+. +..+++|+.++..+++++.    +.+ 
T Consensus        56 ~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~~~~~~-  133 (252)
T 3h7a_A           56 GRIVARSLDARNEDEVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVF-RKVWEMACWAGFVSGRESARLMLAHG-  133 (252)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             CeEEEEECcCCCHHHHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            478999999999999888876      6899999999764211      112 2678899999999888773    344 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceE-EEEccCCc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDL-ITVIPSLM  154 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~-~ilR~~~v  154 (293)
                      ..++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++ .++.|+.+
T Consensus       134 ~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v  189 (252)
T 3h7a_A          134 QGKIFFTGATASLRGG------------------------SGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGV  189 (252)
T ss_dssp             CEEEEEEEEGGGTCCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---
T ss_pred             CcEEEEECCHHHcCCC------------------------CCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCcc
Confidence            4699999998644321                        233589999999999999887764   7999 89999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA  215 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~  215 (293)
                      ..+......    ......       +....      ... +...+|+|++++.++..+..
T Consensus       190 ~T~~~~~~~----~~~~~~-------~~~~~------~~~-~~~pedvA~~~~~l~s~~~~  232 (252)
T 3h7a_A          190 DTAWVRERR----EQMFGK-------DALAN------PDL-LMPPAAVAGAYWQLYQQPKS  232 (252)
T ss_dssp             ------------------------------------------CCHHHHHHHHHHHHHCCGG
T ss_pred             CChhhhccc----hhhhhh-------hhhcC------Ccc-CCCHHHHHHHHHHHHhCchh
Confidence            765432110    000000       00000      013 88999999999999986543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.32  E-value=5.9e-12  Score=110.50  Aligned_cols=171  Identities=15%  Similarity=0.143  Sum_probs=120.0

Q ss_pred             CCeEEEecCCCCCcchhhhhcCC------CEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcCCCccEE
Q 035985           15 GELKIFRADLTDEASFDAPISRS------DIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKTKTVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~------d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   82 (293)
                      .+++++.+|++|++++.++++++      |+|||+||......      .+. ...+..|+.++.++.+++...+ .++|
T Consensus       279 ~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~-~~~~~~nv~g~~~L~~~~~~~~-~~~~  356 (486)
T 2fr1_A          279 ARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERI-ERASRAKVLGARNLHELTRELD-LTAF  356 (486)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHH-HHHTHHHHHHHHHHHHHHTTSC-CSEE
T ss_pred             CEEEEEEeCCCCHHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHH-HHHHHHHHHHHHHHHHHhCcCC-CCEE
Confidence            46899999999999999888754      99999999764321      112 2677889999999999999887 8999


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD  162 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~  162 (293)
                      |++||...+++...                        ...|+.+|...+.+...+.. .|+++++++|+.+.+.+....
T Consensus       357 V~~SS~a~~~g~~g------------------------~~~Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~~gm~~~  411 (486)
T 2fr1_A          357 VLFSSFASAFGAPG------------------------LGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEG  411 (486)
T ss_dssp             EEEEEHHHHTCCTT------------------------CTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC-------
T ss_pred             EEEcChHhcCCCCC------------------------CHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCCCcccch
Confidence            99999876654332                        24799999999988877654 499999999999887642110


Q ss_pred             CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHH
Q 035985          163 IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNK  237 (293)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~  237 (293)
                            ....       .+.        .....+++.+|+++++..++..+..  .+.+..  +.|..+...+..
T Consensus       412 ------~~~~-------~~~--------~~g~~~i~~e~~a~~l~~~l~~~~~--~~~v~~--~d~~~~~~~~~~  461 (486)
T 2fr1_A          412 ------PVAD-------RFR--------RHGVIEMPPETACRALQNALDRAEV--CPIVID--VRWDRFLLAYTA  461 (486)
T ss_dssp             ------------------CT--------TTTEECBCHHHHHHHHHHHHHTTCS--SCEECE--ECHHHHHHHHTS
T ss_pred             ------hHHH-------HHH--------hcCCCCCCHHHHHHHHHHHHhCCCC--eEEEEe--CCHHHHhhhhcc
Confidence                  0000       010        0124578999999999999986543  232222  567777665543

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.32  E-value=3.8e-13  Score=112.42  Aligned_cols=123  Identities=13%  Similarity=0.097  Sum_probs=92.7

Q ss_pred             cCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCC-CccEEEEecccchhcccccCCCC
Q 035985           22 ADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTK-TVKRVILTSSAAAVSINAQNVTG  100 (293)
Q Consensus        22 ~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~  100 (293)
                      +|+.+...+.++++++|+|||+|+........+. ++++.|+.++.++++++++.+ ...+++++|+.....        
T Consensus        66 ~di~~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~-~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~--------  136 (327)
T 1y7t_A           66 AGLEATDDPKVAFKDADYALLVGAAPRKAGMERR-DLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN--------  136 (327)
T ss_dssp             EEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH--------
T ss_pred             CCeEeccChHHHhCCCCEEEECCCcCCCCCCCHH-HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh--------
Confidence            5777767788889999999999998764434455 889999999999999999874 234788877653111        


Q ss_pred             ccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCC
Q 035985          101 LVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLT  160 (293)
Q Consensus       101 ~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~  160 (293)
                      .++.++..       ....|.+.|+.+|+.+|++...+++..|++.+++|+++|||++..
T Consensus       137 ~~~~~~~~-------~~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          137 ALIAYKNA-------PGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             HHHHHHTC-------TTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             HHHHHHHc-------CCCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence            11111110       013455689999999999999999888999999999999998764

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.31  E-value=5.1e-13  Score=108.54  Aligned_cols=180  Identities=16%  Similarity=0.086  Sum_probs=113.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCCCCccccchhHHHHHHHHH----HHHHhcCC--CccE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNV----LKACTKTK--TVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l----~~~~~~~~--~~~~   81 (293)
                      .++.++.+|++|++++.++++       ++|+|||+||....  .+.. ..++.|+.++..+    +..+++.+  +..+
T Consensus        58 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~  134 (267)
T 2gdz_A           58 QKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE--KNWE-KTLQINLVSVISGTYLGLDYMSKQNGGEGGI  134 (267)
T ss_dssp             GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCS--SSHH-HHHHHHTHHHHHHHHHHHHHHCGGGTCCCEE
T ss_pred             CceEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCh--hhHH-HHHhHHHHHHHHHHHHHHHHHHhccCCCCCE
Confidence            368899999999998887765       47999999997542  2344 7888998866554    44444432  1479


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHH-----HhCCceEEEEccCCccC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFA-----QENNIDLITVIPSLMSG  156 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~-----~~~~~~~~ilR~~~v~G  156 (293)
                      ||++||...+.+.                        .+...|+.+|...+.+++.++     ...++++++++|+.+.+
T Consensus       135 iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t  190 (267)
T 2gdz_A          135 IINMSSLAGLMPV------------------------AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNT  190 (267)
T ss_dssp             EEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSS
T ss_pred             EEEeCCccccCCC------------------------CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcc
Confidence            9999998643211                        123589999999999988742     23589999999999976


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEe-ccCCCHHH
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICC-AVNTSVPE  230 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~-~~~~t~~e  230 (293)
                      +...... .  .............+.. .     -....+++++|+|++++.++......| .++++ ++..++.|
T Consensus       191 ~~~~~~~-~--~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          191 AILESIE-K--EENMGQYIEYKDHIKD-M-----IKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHHGGG-C--HHHHGGGGGGHHHHHH-H-----HHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             hhhhccc-c--ccccchhhhHHHHHHH-H-----hccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence            5311000 0  0000000000000000 0     002347899999999999998765444 56664 45555544

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.31  E-value=1.5e-11  Score=98.63  Aligned_cols=156  Identities=17%  Similarity=0.166  Sum_probs=105.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCC-CC------CCCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVN-FS------SDDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~-~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .++.++.+|++|++++.++++       ++|++||+||... ..      ..+.. ..++.|+.++.++++++.    +.
T Consensus        46 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~m~~~  124 (248)
T 3asu_A           46 DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWE-TMIDTNNKGLVYMTRAVLPGMVER  124 (248)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhc
Confidence            368999999999998888765       6899999999752 11      11122 678899999999888875    34


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..+||++||.....+                        ..+...|+.+|...+.+.+.++.+.   |+++++++|+.
T Consensus       125 ~-~g~iv~isS~~~~~~------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~  179 (248)
T 3asu_A          125 N-HGHIINIGSTAGSWP------------------------YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGL  179 (248)
T ss_dssp             T-CCEEEEECCGGGTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECS
T ss_pred             C-CceEEEEccchhccC------------------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccc
Confidence            4 579999999864321                        1234589999999999999988764   89999999999


Q ss_pred             ccC-CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          154 MSG-PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       154 v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +.| +.....    ........    ...  ..       ....+..+|+|++++.++..+
T Consensus       180 v~gT~~~~~~----~~~~~~~~----~~~--~~-------~~~~~~p~dvA~~v~~l~s~~  223 (248)
T 3asu_A          180 VGGTEFSNVR----FKGDDGKA----EKT--YQ-------NTVALTPEDVSEAVWWVSTLP  223 (248)
T ss_dssp             BCC---------------------------------------CCBCHHHHHHHHHHHHHSC
T ss_pred             cccCcchhhc----ccCchHHH----HHH--Hh-------ccCCCCHHHHHHHHHHHhcCC
Confidence            985 321110    00000000    000  00       122468999999999998764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.31  E-value=6.9e-12  Score=100.62  Aligned_cols=163  Identities=18%  Similarity=0.160  Sum_probs=109.0

Q ss_pred             EEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CCCccE
Q 035985           19 IFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TKTVKR   81 (293)
Q Consensus        19 ~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~   81 (293)
                      .+++|++|++++.++++       ++|++||+||.....      ..+.. ..++.|+.++.++++++..    .+ ..+
T Consensus        57 ~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~-~g~  134 (247)
T 1uzm_A           57 GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFE-KVINANLTGAFRVAQRASRSMQRNK-FGR  134 (247)
T ss_dssp             EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHTT-CEE
T ss_pred             CeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhCC-CCE
Confidence            47899999998887765       589999999975421      11122 6788999999999887753    45 689


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~  158 (293)
                      ||++||...+++.                        .+...|+.+|...+.+.+.++.+   .|+++++++|+.+.++.
T Consensus       135 iv~isS~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  190 (247)
T 1uzm_A          135 MIFIGSVSGLWGI------------------------GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM  190 (247)
T ss_dssp             EEEECCCCC-----------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             EEEECCHhhccCC------------------------CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccc
Confidence            9999998644322                        12358999999999999888765   38999999999987642


Q ss_pred             CCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          159 LTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ...    ........... .  +   .       ...+.+++|+|++++.++....  ..| .+.++|.
T Consensus       191 ~~~----~~~~~~~~~~~-~--~---p-------~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG  242 (247)
T 1uzm_A          191 TRA----LDERIQQGALQ-F--I---P-------AKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG  242 (247)
T ss_dssp             HHH----SCHHHHHHHGG-G--C---T-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhh----cCHHHHHHHHh-c--C---C-------CCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCC
Confidence            110    00011111110 0  0   0       2347899999999999887542  234 5566543

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.30  E-value=2.3e-11  Score=97.69  Aligned_cols=163  Identities=12%  Similarity=0.167  Sum_probs=106.8

Q ss_pred             CeEEEecCCCCCcchhhhhc---CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHH----HhcCCCccEE
Q 035985           16 ELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKA----CTKTKTVKRV   82 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~   82 (293)
                      .+.++ +|+  .+++.++++   ++|+|||+||.....      ..+.. ..++.|+.++..++++    +++.+ ..+|
T Consensus        61 ~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-~g~i  135 (249)
T 1o5i_A           61 HRYVV-CDL--RKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFK-EAIDSLFLNMIKIVRNYLPAMKEKG-WGRI  135 (249)
T ss_dssp             SEEEE-CCT--TTCHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred             CeEEE-eeH--HHHHHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CcEE
Confidence            56667 999  445555554   799999999965421      11122 6778899887766544    44555 6899


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPSL  159 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~  159 (293)
                      |++||..++.+                        ..+...|+.+|...+.+.+.++.+   .|+++++++|+.+.++..
T Consensus       136 v~isS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  191 (249)
T 1o5i_A          136 VAITSFSVISP------------------------IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERV  191 (249)
T ss_dssp             EEECCGGGTSC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTH
T ss_pred             EEEcchHhcCC------------------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcc
Confidence            99999874321                        123458999999999999988765   489999999999988752


Q ss_pred             CCCCCccHHHHHH-HHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          160 TPDIPSSVALAAT-LITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       160 ~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ....    ..... .+...   .   .       ...+.+++|+|++++.++....  ..| .++++|.
T Consensus       192 ~~~~----~~~~~~~~~~~---~---p-------~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG  243 (249)
T 1o5i_A          192 KELL----SEEKKKQVESQ---I---P-------MRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGG  243 (249)
T ss_dssp             HHHS----CHHHHHHHHTT---S---T-------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccc----hhhHHHHHHhc---C---C-------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            1100    00111 11110   0   0       2347899999999999887543  234 5577554

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.30  E-value=8.2e-12  Score=99.09  Aligned_cols=150  Identities=19%  Similarity=0.175  Sum_probs=105.1

Q ss_pred             CCeEEEecCCCCCcchhhhhcCC----CEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcCC--CccEE
Q 035985           15 GELKIFRADLTDEASFDAPISRS----DIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKTK--TVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~----d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~   82 (293)
                      .++.++.+|++|.+++.++++.+    |+|||+||......      ++. +..++.|+.++.++++++...-  ...++
T Consensus        47 ~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~~~i  125 (230)
T 3guy_A           47 NNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQI-QTLIENNLSSAINVLRELVKRYKDQPVNV  125 (230)
T ss_dssp             SCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSCCEE
T ss_pred             hccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence            47899999999999999888754    99999999754221      112 2678899999999998876431  01389


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSL  159 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~  159 (293)
                      |++||..+..+                        ..+...|+.+|...+.+.+.++.+.   |+++..++|+.+..+..
T Consensus       126 v~isS~~~~~~------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  181 (230)
T 3guy_A          126 VMIMSTAAQQP------------------------KAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFW  181 (230)
T ss_dssp             EEECCGGGTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-----
T ss_pred             EEEeecccCCC------------------------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHH
Confidence            99999864332                        1234689999999999999998875   79999999998866532


Q ss_pred             CCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          160 TPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      ...             +..  .   .       ...+.+++|+|++++.++.++.
T Consensus       182 ~~~-------------~~~--~---~-------~~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          182 ETS-------------GKS--L---D-------TSSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             ------------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred             Hhc-------------CCC--C---C-------cccCCCHHHHHHHHHHHHhCcC
Confidence            110             000  0   0       2456789999999999988653

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.30  E-value=1.5e-11  Score=98.69  Aligned_cols=158  Identities=16%  Similarity=0.167  Sum_probs=108.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC---CC--ccccchhHHHHHHHHHHHHHhcC---CCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS---DD--PETDMIKPAIQGVVNVLKACTKT---KTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~---~~--~~~~~~~~n~~~~~~l~~~~~~~---~~~   79 (293)
                      .++.++++|++|++++.++++       ++|++||+||......   .+  ..+..++.|+.++.++++++...   .+ 
T Consensus        56 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-  134 (247)
T 2jah_A           56 AKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-  134 (247)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-
Confidence            468999999999998887764       7999999999753211   01  11257889999999999887542   11 


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      .+||++||.....+.                        .+...|+.+|...+.+.+.++.+   .|+++++++|+.+..
T Consensus       135 g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T  190 (247)
T 2jah_A          135 GTVVQMSSIAGRVNV------------------------RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDT  190 (247)
T ss_dssp             CEEEEECCGGGTCCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSS
T ss_pred             CEEEEEccHHhcCCC------------------------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCC
Confidence            699999998643211                        13358999999999998888765   389999999999987


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +.......   .........    .+  .       +..++..+|+|++++.++..+
T Consensus       191 ~~~~~~~~---~~~~~~~~~----~~--~-------~~~~~~pedvA~~v~~l~s~~  231 (247)
T 2jah_A          191 ELRGHITH---TATKEMYEQ----RI--S-------QIRKLQAQDIAEAVRYAVTAP  231 (247)
T ss_dssp             SGGGGCCC---HHHHHHHHH----HT--T-------TSCCBCHHHHHHHHHHHHHSC
T ss_pred             cchhcccc---hhhHHHHHh----cc--c-------ccCCCCHHHHHHHHHHHhCCC
Confidence            64221110   111111110    00  1       222578999999999998764

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.30  E-value=1.3e-11  Score=99.83  Aligned_cols=150  Identities=19%  Similarity=0.182  Sum_probs=104.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHhc----C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACTK----T   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~   76 (293)
                      .++.++.+|++|.+++.++++       .+|+|||+||.....       ..+.. ..+++|+.++.++++++..    .
T Consensus        78 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~~~~~  156 (262)
T 3rkr_A           78 GEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWD-ALIAVNLKAPYLLLRAFAPAMIAA  156 (262)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred             CceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhC
Confidence            468999999999998887765       589999999973211       11122 6788999999999888643    4


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                      + ..+||++||...+.                        +..+...|+.+|...+.+++.++.+   .|+++.+++|+.
T Consensus       157 ~-~g~iv~isS~~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~  211 (262)
T 3rkr_A          157 K-RGHIINISSLAGKN------------------------PVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGS  211 (262)
T ss_dssp             T-CCEEEEECSSCSSC------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECC
T ss_pred             C-CceEEEEechhhcC------------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCC
Confidence            4 57999999986432                        1123468999999999999988765   489999999998


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA  215 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~  215 (293)
                      +..+.....            ....      .       ...++..+|+|++++.++.....
T Consensus       212 v~t~~~~~~------------~~~~------~-------~~~~~~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          212 VRTEFGVGL------------SAKK------S-------ALGAIEPDDIADVVALLATQADQ  248 (262)
T ss_dssp             C-----------------------------------------CCCHHHHHHHHHHHHTCCTT
T ss_pred             CcCCccccc------------cccc------c-------cccCCCHHHHHHHHHHHhcCccc
Confidence            865432110            0000      0       23467899999999999886543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.29  E-value=3.6e-11  Score=97.57  Aligned_cols=168  Identities=13%  Similarity=0.101  Sum_probs=116.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++.++++|++|++++.++++       .+|++||+||......      .+.. ..++.|+.++.++++++    ++.+
T Consensus        73 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~  151 (267)
T 3gdg_A           73 IKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWN-HVVQVDLNGTFHCAKAVGHHFKERG  151 (267)
T ss_dssp             CCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHH-HHHHhcchHHHHHHHHHHHHHHHcC
Confidence            478999999999998887765       5799999999764221      1122 68889999999999887    3444


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCC--ceEEEEccCCcc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENN--IDLITVIPSLMS  155 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~--~~~~ilR~~~v~  155 (293)
                       ..++|++||.....+..                      ..+...|+.+|...+.+++.++.+.+  +++..+.|+.+.
T Consensus       152 -~g~iv~isS~~~~~~~~----------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~  208 (267)
T 3gdg_A          152 -TGSLVITASMSGHIANF----------------------PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYID  208 (267)
T ss_dssp             -CCEEEEECCGGGTSCCS----------------------SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEE
T ss_pred             -CceEEEEccccccccCC----------------------CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccc
Confidence             57999999976443211                      12346899999999999999988763  789999999887


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .+....    ........+.....             ...+.+++|+|++++.++....  ..| .++++|
T Consensus       209 t~~~~~----~~~~~~~~~~~~~~-------------~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdg  262 (267)
T 3gdg_A          209 TGLSDF----VPKETQQLWHSMIP-------------MGRDGLAKELKGAYVYFASDASTYTTGADLLIDG  262 (267)
T ss_dssp             CSCGGG----SCHHHHHHHHTTST-------------TSSCEETHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred             cchhhh----CCHHHHHHHHhcCC-------------CCCCcCHHHHHhHhheeecCccccccCCEEEECC
Confidence            653221    11111222211110             2457889999999999887543  334 556654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.29  E-value=4e-12  Score=102.96  Aligned_cols=168  Identities=22%  Similarity=0.205  Sum_probs=114.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCc---cccchhHHHHHHHHHHHHHhcCC-CccE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDP---ETDMIKPAIQGVVNVLKACTKTK-TVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~---~~~~~~~n~~~~~~l~~~~~~~~-~~~~   81 (293)
                      .++.++++|++|++++.++++       .+|++||+||......  ...   .+..++.|+.++.++++++...- +..+
T Consensus        52 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~  131 (263)
T 2a4k_A           52 AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGS  131 (263)
T ss_dssp             SSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCE
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCE
Confidence            468899999999998887765       5799999999754211  111   12678899999999999886531 1369


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~  158 (293)
                      ||++||...+ +.+                        +...|+.+|...+.+.+.++.+   .|+++++++|+.+.++.
T Consensus       132 iv~isS~~~~-~~~------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  186 (263)
T 2a4k_A          132 LVLTGSVAGL-GAF------------------------GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM  186 (263)
T ss_dssp             EEEECCCTTC-CHH------------------------HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred             EEEEecchhc-CCC------------------------CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCch
Confidence            9999998643 211                        1248999999999998888765   38999999999998875


Q ss_pred             CCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          159 LTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .... .   ......+....   +          ...+.+.+|+|++++.++....  ..| .+.++|.
T Consensus       187 ~~~~-~---~~~~~~~~~~~---p----------~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG  238 (263)
T 2a4k_A          187 TAGL-P---PWAWEQEVGAS---P----------LGRAGRPEEVAQAALFLLSEESAYITGQALYVDGG  238 (263)
T ss_dssp             GTTS-C---HHHHHHHHHTS---T----------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhhc-C---HHHHHHHHhcC---C----------CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            3221 1   11111111110   0          1236789999999999987543  334 4566543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.29  E-value=6e-12  Score=102.56  Aligned_cols=170  Identities=18%  Similarity=0.145  Sum_probs=113.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++.++++|++|.+++.++++      ++|++||+||.....      .++.. ..+++|+.++.++++++.    +.+ 
T Consensus        82 ~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-  159 (275)
T 4imr_A           82 GTAQELAGDLSEAGAGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLA-FQLAVNLGSTVDMLQSALPKMVARK-  159 (275)
T ss_dssp             CCEEEEECCTTSTTHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             CeEEEEEecCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhcC-
Confidence            578999999999998888775      689999999975321      11122 678899999999998873    334 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..+||++||...+.                        +..+...|+.+|...+.+.+.++.+.   |+++..++|+.+.
T Consensus       160 ~g~Iv~isS~~~~~------------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~  215 (275)
T 4imr_A          160 WGRVVSIGSINQLR------------------------PKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVD  215 (275)
T ss_dssp             CEEEEEECCGGGTS------------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred             CcEEEEECCHHhCC------------------------CCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEecccc
Confidence            57999999986432                        11234579999999999999888764   8999999999987


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .+...... ...............  +          ..-+...+|+|++++.++....  ..| .++++|
T Consensus       216 T~~~~~~~-~~~~~~~~~~~~~~~--p----------~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          216 TDRNADRR-AQDPEGWDEYVRTLN--W----------MGRAGRPEEMVGAALFLASEACSFMTGETIFLTG  273 (275)
T ss_dssp             SHHHHHHH-HHCHHHHHHHHHHHS--T----------TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             Cccccccc-ccChHHHHHHHhhcC--c----------cCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence            65211000 000000000000000  0          1225679999999999887543  334 456654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.28  E-value=4.6e-11  Score=96.09  Aligned_cols=163  Identities=17%  Similarity=0.176  Sum_probs=111.1

Q ss_pred             CeEEEecCC--CCCcchhhhhc-------CCCEEEEecccCCC--CC--CCc--cccchhHHHHHHHHHHHHH----hcC
Q 035985           16 ELKIFRADL--TDEASFDAPIS-------RSDIVFHVATPVNF--SS--DDP--ETDMIKPAIQGVVNVLKAC----TKT   76 (293)
Q Consensus        16 ~v~~v~~Dl--~d~~~~~~~~~-------~~d~Vih~a~~~~~--~~--~~~--~~~~~~~n~~~~~~l~~~~----~~~   76 (293)
                      ++.++.+|+  +|.+++.++++       ++|++||+||....  ..  ...  .+..+++|+.++..+++++    ++.
T Consensus        63 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~  142 (252)
T 3f1l_A           63 QPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS  142 (252)
T ss_dssp             CCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             CceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC
Confidence            688999999  88887777664       68999999997421  11  111  1267899999999999988    445


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCC--ceEEEEccCCc
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENN--IDLITVIPSLM  154 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~--~~~~ilR~~~v  154 (293)
                      + ..++|++||.....+.                        .....|+.+|...+.+.+.++.+++  +++..+.|+.+
T Consensus       143 ~-~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v  197 (252)
T 3f1l_A          143 D-AGSLVFTSSSVGRQGR------------------------ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGT  197 (252)
T ss_dssp             S-SCEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSB
T ss_pred             C-CCEEEEECChhhccCC------------------------CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcc
Confidence            5 6799999998644321                        2345899999999999999988763  88999999987


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEE-eccCCCH
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYIC-CAVNTSV  228 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~-~~~~~t~  228 (293)
                      ..+.            ........             ....+...+|++.+++.++....  ..| .+.+ +|...++
T Consensus       198 ~t~~------------~~~~~~~~-------------~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  250 (252)
T 3f1l_A          198 RTAM------------RASAFPTE-------------DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGI  250 (252)
T ss_dssp             SSHH------------HHHHCTTC-------------CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC-----
T ss_pred             cCch------------hhhhCCcc-------------chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCC
Confidence            5431            11111100             01335679999999999987653  334 5566 4444444

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.27  E-value=2e-11  Score=98.72  Aligned_cols=157  Identities=23%  Similarity=0.208  Sum_probs=105.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++.+|++|++++.++++       ++|++||+||......      .+.. ..+++|+.++..+++++.    +.+
T Consensus        53 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~  131 (264)
T 3tfo_A           53 GTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWE-RMIDVNIKGVLWGIGAVLPIMEAQR  131 (264)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHhCC
Confidence            468889999999998887764       7899999999764221      1122 678899999998888764    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-CceEEEEccCCccC
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-NIDLITVIPSLMSG  156 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-~~~~~ilR~~~v~G  156 (293)
                       ..+||++||...+.+.                        .....|+.+|...+.+.+.++.+. ++++..++|+.|..
T Consensus       132 -~g~IV~isS~~~~~~~------------------------~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T  186 (264)
T 3tfo_A          132 -SGQIINIGSIGALSVV------------------------PTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVES  186 (264)
T ss_dssp             -CEEEEEECCGGGTCCC------------------------TTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC--
T ss_pred             -CeEEEEEcCHHHcccC------------------------CCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcC
Confidence             5799999998644321                        233589999999999999988776 89999999998876


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA  215 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~  215 (293)
                      +......        ..  .........        ...+...+|+|++++.+++.+..
T Consensus       187 ~~~~~~~--------~~--~~~~~~~~~--------~~~~~~pedvA~~v~~l~s~~~~  227 (264)
T 3tfo_A          187 ELAGTIT--------HE--ETMAAMDTY--------RAIALQPADIARAVRQVIEAPQS  227 (264)
T ss_dssp             ---------------------------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred             ccccccc--------ch--hHHHHHHhh--------hccCCCHHHHHHHHHHHhcCCcc
Confidence            5322100        00  000000000        12246799999999999987654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.27  E-value=9.2e-12  Score=99.77  Aligned_cols=159  Identities=18%  Similarity=0.158  Sum_probs=98.4

Q ss_pred             CCeEEEecCCCCCc---chhhhh---cCCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEA---SFDAPI---SRSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~---~~~~~~---~~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++.++.+|+++..   .+.+.+   .++|+|||+||......      .+.. ..++.|+.++..+++++.    +.+ 
T Consensus        48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~~~~~l~~~~~~~~~~~~-  125 (245)
T 3e9n_A           48 EGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWH-AHLDLNVIVPAELSRQLLPALRAAS-  125 (245)
T ss_dssp             TTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC----------CHHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             cCCcceecccchHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhhcC-
Confidence            47899999998873   333333   36999999999764221      1122 678899999888887764    223 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                       .++|++||...+.+.                        .+...|+.+|...+.+++.++.+   .|+++++++|+.+.
T Consensus       126 -g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  180 (245)
T 3e9n_A          126 -GCVIYINSGAGNGPH------------------------PGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTN  180 (245)
T ss_dssp             -CEEEEEC----------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred             -CeEEEEcCcccccCC------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCcc
Confidence             589999998644321                        23358999999999999998875   48999999999998


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC  221 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~  221 (293)
                      ++.....        .... +..  +   .       ...+++++|+|++++.+++.+..+.+|++
T Consensus       181 t~~~~~~--------~~~~-~~~--~---~-------~~~~~~p~dvA~~i~~l~~~~~~~~~~~i  225 (245)
T 3e9n_A          181 TPMLQGL--------MDSQ-GTN--F---R-------PEIYIEPKEIANAIRFVIDAGETTQITNV  225 (245)
T ss_dssp             -----------------------------C-------CGGGSCHHHHHHHHHHHHTSCTTEEEEEE
T ss_pred             Cchhhhh--------hhhh-hcc--c---c-------cccCCCHHHHHHHHHHHHcCCCccceeee
Confidence            7643210        0000 000  0   0       24578899999999999998776666654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.27  E-value=1.1e-10  Score=97.50  Aligned_cols=167  Identities=17%  Similarity=0.069  Sum_probs=113.8

Q ss_pred             CCeEEEecCCCCCc-----------------chhhhhc-------CCCEEEEecccCCCCC--CCc--------------
Q 035985           15 GELKIFRADLTDEA-----------------SFDAPIS-------RSDIVFHVATPVNFSS--DDP--------------   54 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~-----------------~~~~~~~-------~~d~Vih~a~~~~~~~--~~~--------------   54 (293)
                      .++.++++|++|++                 ++.++++       .+|++||+||......  ...              
T Consensus        97 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~  176 (328)
T 2qhx_A           97 NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM  176 (328)
T ss_dssp             TCEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHH
T ss_pred             CeEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccccccccc
Confidence            46899999999999                 8877765       7899999999753211  001              


Q ss_pred             ---cccchhHHHHHHHHHHHHHhc----CCC-----ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCc
Q 035985           55 ---ETDMIKPAIQGVVNVLKACTK----TKT-----VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTW  122 (293)
Q Consensus        55 ---~~~~~~~n~~~~~~l~~~~~~----~~~-----~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~  122 (293)
                         ....+++|+.++..+++++..    .+.     ..+||++||.....+                        ..+..
T Consensus       177 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~------------------------~~~~~  232 (328)
T 2qhx_A          177 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP------------------------LLGYT  232 (328)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSC------------------------CTTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccC------------------------CCCcH
Confidence               125678999999999887753    220     368999999864321                        12345


Q ss_pred             hhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeH
Q 035985          123 GYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHV  199 (293)
Q Consensus       123 ~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v  199 (293)
                      .|+.+|...+.+.+.++.+.   |+++++++|+.|..+. . .   . ......+... .  +.         ..-+...
T Consensus       233 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~-~---~-~~~~~~~~~~-~--p~---------~~r~~~p  294 (328)
T 2qhx_A          233 IYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M---P-PAVWEGHRSK-V--PL---------YQRDSSA  294 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C-S---C-HHHHHHHHTT-C--TT---------TTSCBCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c-c---c-HHHHHHHHhh-C--CC---------CCCCCCH
Confidence            89999999999999887764   8999999999998876 2 1   1 1222222111 1  11         1136779


Q ss_pred             HhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          200 EDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       200 ~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +|+|++++.++....  ..| .+.++|
T Consensus       295 edvA~~v~~l~s~~~~~itG~~i~vdG  321 (328)
T 2qhx_A          295 AEVSDVVIFLCSSKAKYITGTCVKVDG  321 (328)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCccccCccCcEEEECC
Confidence            999999999986432  344 456654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.27  E-value=3.6e-11  Score=96.85  Aligned_cols=169  Identities=18%  Similarity=0.171  Sum_probs=116.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------------CCCEEEEecccCCCCC-----CCccccchhHHHHHHHHHHHHHhcC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------------RSDIVFHVATPVNFSS-----DDPETDMIKPAIQGVVNVLKACTKT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------------~~d~Vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~   76 (293)
                      .++.++.+|++|.+.+.++++             .+|++||+||......     .+..+..+++|+.++.++++++...
T Consensus        57 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  136 (255)
T 3icc_A           57 GSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSR  136 (255)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTT
T ss_pred             CceEEEecCcCCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHh
Confidence            468889999999988777654             2899999999754221     0111256889999999999998765


Q ss_pred             --CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEcc
Q 035985           77 --KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIP  151 (293)
Q Consensus        77 --~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~  151 (293)
                        + ..++|++||.....+.                        .....|+.+|...+.+.+.++.+.   ++++..++|
T Consensus       137 ~~~-~~~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  191 (255)
T 3icc_A          137 LRD-NSRIINISSAATRISL------------------------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILP  191 (255)
T ss_dssp             EEE-EEEEEEECCGGGTSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             hCC-CCEEEEeCChhhccCC------------------------CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEE
Confidence              3 4689999998643321                        223589999999999999887763   899999999


Q ss_pred             CCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          152 SLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       152 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +.+..+........  ...........             ....+.+++|+|++++.++....  ..| .++++|
T Consensus       192 G~v~t~~~~~~~~~--~~~~~~~~~~~-------------~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (255)
T 3icc_A          192 GFVKTDMNAELLSD--PMMKQYATTIS-------------AFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSG  251 (255)
T ss_dssp             CCBCCSSSTTTTTS--HHHHHHHHHTS-------------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             eeecccchhhhccc--HHHHHhhhccC-------------CcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecC
Confidence            99987754332111  11111111111             02446789999999999886543  334 556654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.27  E-value=1.4e-11  Score=99.95  Aligned_cols=171  Identities=15%  Similarity=0.107  Sum_probs=113.8

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      ++.++++|++|++++.++++       ++|++||+||......      ++.. ..++.|+.++.++++++.    +.+ 
T Consensus        60 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~~-  137 (265)
T 3lf2_A           60 RLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWS-EELQLKFFSVIHPVRAFLPQLESRA-  137 (265)
T ss_dssp             CEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTTST-
T ss_pred             eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhccC-
Confidence            58999999999998877764       6899999999754211      1122 678899999999998874    334 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..+||++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..++|+.+.
T Consensus       138 ~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~  193 (265)
T 3lf2_A          138 DAAIVCVNSLLASQPE------------------------PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVE  193 (265)
T ss_dssp             TEEEEEEEEGGGTSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             CeEEEEECCcccCCCC------------------------CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCc
Confidence            5689999998643321                        234589999999999999888764   8999999999997


Q ss_pred             CCCCCCCC------CccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDI------PSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ++......      ......+...+.... .++          ...+...+|+|++++.++....  ..| .++++|
T Consensus       194 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p----------~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG  259 (265)
T 3lf2_A          194 SGQWRRRFEAREERELDWAQWTAQLARNK-QIP----------LGRLGKPIEAARAILFLASPLSAYTTGSHIDVSG  259 (265)
T ss_dssp             CHHHHHHHTC------CHHHHHHHHHHHT-TCT----------TCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESS
T ss_pred             CchhhhhhhhhhhhccCHHHHHHHHhhcc-CCC----------cCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECC
Confidence            65211000      000011111111000 011          1336789999999999987543  345 456654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.26  E-value=3.7e-11  Score=96.54  Aligned_cols=150  Identities=19%  Similarity=0.152  Sum_probs=106.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-CCc---cccchhHHHHHHHHHHHHHh----cCCCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-DDP---ETDMIKPAIQGVVNVLKACT----KTKTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-~~~---~~~~~~~n~~~~~~l~~~~~----~~~~~   79 (293)
                      .++.++++|++|.+++.++++       ++|++||+||...... ...   .+..++.|+.++..+++++.    +.+ .
T Consensus        59 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~  137 (250)
T 3nyw_A           59 QEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-N  137 (250)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             CcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence            578999999999998887764       6899999999754221 111   12678899999999988873    344 5


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .++|++||.....+.                        .+...|+.+|...+.+.+.++.+.   |+++..++|+.+..
T Consensus       138 g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T  193 (250)
T 3nyw_A          138 GYIFNVASRAAKYGF------------------------ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNT  193 (250)
T ss_dssp             EEEEEECC-------------------------------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCS
T ss_pred             eEEEEEccHHhcCCC------------------------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccC
Confidence            799999998644321                        224589999999999999887764   89999999998864


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      +.            .... ...  ..          ...++..+|+|++++.++..+.
T Consensus       194 ~~------------~~~~-~~~--~~----------~~~~~~p~dva~~v~~l~s~~~  226 (250)
T 3nyw_A          194 DM------------AKKA-GTP--FK----------DEEMIQPDDLLNTIRCLLNLSE  226 (250)
T ss_dssp             HH------------HHHT-TCC--SC----------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             ch------------hhhc-CCC--cc----------cccCCCHHHHHHHHHHHHcCCC
Confidence            31            1111 111  10          2347889999999999998654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.25  E-value=1.1e-11  Score=100.35  Aligned_cols=171  Identities=14%  Similarity=0.147  Sum_probs=111.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC--CCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT--KTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~   79 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      .+. +..++.|+.++..+++++...  + .
T Consensus        63 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~m~~-~  140 (262)
T 3ksu_A           63 AKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEF-DAMDTINNKVAYFFIKQAAKHMNP-N  140 (262)
T ss_dssp             CEEEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHH-HHHHHHHHHHHHHHHHHHHTTEEE-E
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHhhcC-C
Confidence            468899999999998888775       6899999999764221      112 267789999999999999865  3 4


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..+.|+.+..
T Consensus       141 g~iv~isS~~~~~~~~------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T  196 (262)
T 3ksu_A          141 GHIITIATSLLAAYTG------------------------FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDT  196 (262)
T ss_dssp             EEEEEECCCHHHHHHC------------------------CCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCT
T ss_pred             CEEEEEechhhccCCC------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcC
Confidence            6899999986544322                        22479999999999999998875   79999999998865


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC-CCCC-cEEEeccCCC
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE-SASG-RYICCAVNTS  227 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~-~~~~-~y~~~~~~~t  227 (293)
                      +.......   ......... .  .          -...+...+|+|++++.++... ...| .++++|....
T Consensus       197 ~~~~~~~~---~~~~~~~~~-~--~----------~~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          197 SFFYGQET---KESTAFHKS-Q--A----------MGNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYTT  253 (262)
T ss_dssp             HHHHTCC----------------------------CCCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCCC
T ss_pred             ccccccCc---hHHHHHHHh-c--C----------cccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCccC
Confidence            42110000   000000000 0  0          0234678999999999988752 2345 4577665433

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.25  E-value=1.7e-11  Score=97.48  Aligned_cols=146  Identities=16%  Similarity=0.126  Sum_probs=104.8

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      ++.++.+|++|++++.++++       .+|++||+||.....      .++.. ..++.|+.++..+++++.    +.+ 
T Consensus        50 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~~-  127 (235)
T 3l6e_A           50 AVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIR-RVMESNLVSTILVAQQTVRLIGERG-  127 (235)
T ss_dssp             GEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred             CceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            68999999999998887765       689999999975321      11122 678899999998888874    333 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                       .++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..++|+.+-
T Consensus       128 -~~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~  182 (235)
T 3l6e_A          128 -GVLANVLSSAAQVGK------------------------ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIR  182 (235)
T ss_dssp             -EEEEEECCEECCSSC------------------------SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEEC
T ss_pred             -CEEEEEeCHHhcCCC------------------------CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCcc
Confidence             399999998644322                        123589999999999999998764   7999999999886


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      .+.....            ..       ..       ...+...+|+|++++.++..+.
T Consensus       183 T~~~~~~------------~~-------~~-------~~~~~~pedvA~~v~~l~~~~~  215 (235)
T 3l6e_A          183 SEFWDNT------------DH-------VD-------PSGFMTPEDAAAYMLDALEARS  215 (235)
T ss_dssp             CCC-------------------------------------CBCHHHHHHHHHHHTCCCS
T ss_pred             Ccchhcc------------CC-------CC-------CcCCCCHHHHHHHHHHHHhCCC
Confidence            5432110            00       00       1246789999999999998654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.25  E-value=6.8e-11  Score=94.04  Aligned_cols=150  Identities=19%  Similarity=0.201  Sum_probs=107.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC---CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT---KT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~   78 (293)
                      .++.++++|++|++++.++++       ++|++||+||......      .+.. ..++.|+.++.++++++...   + 
T Consensus        52 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~-  129 (235)
T 3l77_A           52 VEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFH-EMIEVNLLGVWRTLKAFLDSLKRT-  129 (235)
T ss_dssp             CCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred             CeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhc-
Confidence            478999999999998888876       6899999999764221      1122 67889999999999988542   2 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-CceEEEEccCCccCC
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-NIDLITVIPSLMSGP  157 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~  157 (293)
                      ..++|++||.....+.                        .....|+.+|...+.+++.+..+. ++++++++|+.+-.+
T Consensus       130 ~~~ii~~sS~~~~~~~------------------------~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~  185 (235)
T 3l77_A          130 GGLALVTTSDVSARLI------------------------PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTY  185 (235)
T ss_dssp             TCEEEEECCGGGSSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSS
T ss_pred             CCcEEEEecchhcccC------------------------CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccc
Confidence            2567777776533221                        123589999999999999885443 899999999988665


Q ss_pred             CCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC
Q 035985          158 SLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA  215 (293)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~  215 (293)
                      ......            ...      .       ...++..+|+|++++.+++.+..
T Consensus       186 ~~~~~~------------~~~------~-------~~~~~~p~dva~~v~~l~~~~~~  218 (235)
T 3l77_A          186 FGGSKP------------GKP------K-------EKGYLKPDEIAEAVRCLLKLPKD  218 (235)
T ss_dssp             TTTCCS------------CCC------G-------GGTCBCHHHHHHHHHHHHTSCTT
T ss_pred             cccccC------------Ccc------c-------ccCCCCHHHHHHHHHHHHcCCCC
Confidence            322110            000      0       12467899999999999987653

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.25  E-value=5.7e-11  Score=96.57  Aligned_cols=156  Identities=13%  Similarity=0.133  Sum_probs=103.6

Q ss_pred             CCeEEEecCCCCCcchhhhhcC-------CCEEEEecccCCC-C------CCCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPISR-------SDIVFHVATPVNF-S------SDDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~-------~d~Vih~a~~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .++.++++|++|++++.++++.       +|++||+||.... .      ..+.. ..++.|+.++.++++++.    +.
T Consensus        69 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~~~~~~~~~m~~~  147 (272)
T 2nwq_A           69 TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWD-TMVDTNIKGLLYSTRLLLPRLIAH  147 (272)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3689999999999988887754       5999999997532 1      01122 678899999888777664    44


Q ss_pred             CCcc-EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccC
Q 035985           77 KTVK-RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPS  152 (293)
Q Consensus        77 ~~~~-~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~  152 (293)
                      + .. +||++||...+.+                        ......|+.+|...+.+.+.++.+.   |+++++++|+
T Consensus       148 ~-~g~~IV~isS~~~~~~------------------------~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG  202 (272)
T 2nwq_A          148 G-AGASIVNLGSVAGKWP------------------------YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPG  202 (272)
T ss_dssp             C-TTCEEEEECCGGGTSC------------------------CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEC
T ss_pred             C-CCcEEEEeCCchhccC------------------------CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcC
Confidence            4 46 9999999864321                        1123589999999999999988653   7999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+.++.....    ..   ..  .... .....       ....+..+|+|++++.++..+
T Consensus       203 ~v~T~~~~~~----~~---~~--~~~~-~~~~~-------~~~~~~pedvA~~v~~l~s~~  246 (272)
T 2nwq_A          203 LCESEFSLVR----FG---GD--QARY-DKTYA-------GAHPIQPEDIAETIFWIMNQP  246 (272)
T ss_dssp             SBC-------------------------------------CCCCBCHHHHHHHHHHHHTSC
T ss_pred             CCcCcchhcc----cc---cc--hHHH-HHhhc-------cCCCCCHHHHHHHHHHHhCCC
Confidence            9987642110    00   00  0000 00000       122468999999999998864

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.25  E-value=3e-11  Score=106.51  Aligned_cols=174  Identities=13%  Similarity=0.096  Sum_probs=123.1

Q ss_pred             CCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCCC---CC--ccccchhHHHHHHHHHHHHHhcC-CCccEEEEec
Q 035985           15 GELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFSS---DD--PETDMIKPAIQGVVNVLKACTKT-KTVKRVILTS   86 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~~---~~--~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S   86 (293)
                      .+++++.+|++|.+++.+++++  +|+|||+||......   ..  .....+..|+.++.++.+++... + .++||++|
T Consensus       312 ~~v~~~~~Dvtd~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~S  390 (511)
T 2z5l_A          312 CEVVHAACDVAERDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFS  390 (511)
T ss_dssp             CEEEEEECCSSCHHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEE
T ss_pred             CEEEEEEeCCCCHHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEe
Confidence            4689999999999999999875  999999999764321   01  11256788999999999999876 5 78999999


Q ss_pred             ccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCcc
Q 035985           87 SAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSS  166 (293)
Q Consensus        87 S~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~  166 (293)
                      |...+++..                        ....|+.+|...+.+++.+. ..|+++++++|+.+-+.+...   ..
T Consensus       391 S~a~~~g~~------------------------g~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~---~~  442 (511)
T 2z5l_A          391 SVTGTWGNA------------------------GQGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAA---GA  442 (511)
T ss_dssp             EGGGTTCCT------------------------TBHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCC---CH
T ss_pred             CHHhcCCCC------------------------CCHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCcccc---cc
Confidence            987555433                        23589999999999988765 449999999999874333211   11


Q ss_pred             HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhC
Q 035985          167 VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF  239 (293)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~  239 (293)
                      .   ...+.        ..       ....++.+|+++++..++..+..  .+.+.  .+.|..+...+....
T Consensus       443 ~---~~~~~--------~~-------g~~~l~~e~~a~~l~~al~~~~~--~v~v~--~~d~~~~~~~~~~~~  493 (511)
T 2z5l_A          443 G---EESLS--------RR-------GLRAMDPDAAVDALLGAMGRNDV--CVTVV--DVDWERFAPATNAIR  493 (511)
T ss_dssp             H---HHHHH--------HH-------TBCCBCHHHHHHHHHHHHHHTCS--EEEEC--CBCHHHHHHHHHHHS
T ss_pred             c---HHHHH--------hc-------CCCCCCHHHHHHHHHHHHhCCCC--EEEEE--eCCHHHHHhhhcccC
Confidence            1   11111        01       24468899999999999986532  23332  356777777665543

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.25  E-value=1.8e-11  Score=98.46  Aligned_cols=158  Identities=13%  Similarity=0.132  Sum_probs=110.6

Q ss_pred             EEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-------CCccccchhHHHHHHHHHHHHHhcCC-CccEE
Q 035985           18 KIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-------DDPETDMIKPAIQGVVNVLKACTKTK-TVKRV   82 (293)
Q Consensus        18 ~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~   82 (293)
                      ..+.+|++|.+++.++++       ++|+|||+||......       .+.. ..++.|+.++.++++++...- +-.+|
T Consensus        62 ~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~~~g~i  140 (251)
T 3orf_A           62 HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVK-GMIDMNLYSAFASAHIGAKLLNQGGLF  140 (251)
T ss_dssp             EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHH-HHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred             cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHH-HHHHHHhHHHHHHHHHHHHhhccCCEE
Confidence            457789999988877764       4799999999753211       1122 678899999999999887542 02489


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-----CCceEEEEccCCccCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-----NNIDLITVIPSLMSGP  157 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~  157 (293)
                      |++||...+.+.                        .+...|+.+|...+.+++.++.+     .++++.+++|+.+.++
T Consensus       141 v~isS~~~~~~~------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~  196 (251)
T 3orf_A          141 VLTGASAALNRT------------------------SGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP  196 (251)
T ss_dssp             EEECCGGGGSCC------------------------TTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH
T ss_pred             EEEechhhccCC------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc
Confidence            999998744321                        23458999999999999998877     4799999999988653


Q ss_pred             CCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhcc---CCCCC-cEEE-eccC
Q 035985          158 SLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEK---ESASG-RYIC-CAVN  225 (293)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~---~~~~~-~y~~-~~~~  225 (293)
                      .            ........             ....+++++|+|++++.++..   ....| .+.+ +++.
T Consensus       197 ~------------~~~~~~~~-------------~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~  244 (251)
T 3orf_A          197 T------------NRKYMSDA-------------NFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSK  244 (251)
T ss_dssp             H------------HHHHCTTS-------------CGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred             c------------hhhhcccc-------------cccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCc
Confidence            2            11111110             124578899999999999987   33344 4544 4443

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.24  E-value=3.9e-11  Score=98.08  Aligned_cols=159  Identities=14%  Similarity=0.106  Sum_probs=107.8

Q ss_pred             eEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHhcC----C-
Q 035985           17 LKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACTKT----K-   77 (293)
Q Consensus        17 v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~-   77 (293)
                      +.++++|++|++++.++++       .+|++||+||.....       .++. +..+++|+.++..+++++...    + 
T Consensus        85 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~-~~~~~vN~~g~~~~~~~~~~~~~~~~~  163 (281)
T 4dry_A           85 VRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQW-NGIVAANLTGAFLCTQHAFRMMKAQTP  163 (281)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHSSS
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            5899999999998887764       679999999975321       1112 258889999988887776532    1 


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                      +..+||++||.....+                        ..+...|+.+|...+.+.+.++.+   .++++.+++|+.|
T Consensus       164 ~~g~IV~isS~~~~~~------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v  219 (281)
T 4dry_A          164 RGGRIINNGSISAQTP------------------------RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNA  219 (281)
T ss_dssp             CCEEEEEECCGGGTCC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECB
T ss_pred             CCcEEEEECCHHhCCC------------------------CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcC
Confidence            1368999999864332                        123468999999999999988865   4899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGR  218 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~  218 (293)
                      ..+.....           ..+.........       ...++..+|+|++++.++..+....+
T Consensus       220 ~T~~~~~~-----------~~~~~~~~~~~~-------~~~~~~pedvA~~v~fL~s~~~~~~i  265 (281)
T 4dry_A          220 ATDMTARM-----------STGVLQANGEVA-------AEPTIPIEHIAEAVVYMASLPLSANV  265 (281)
T ss_dssp             CC------------------CEEECTTSCEE-------ECCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred             cChhhhhh-----------cchhhhhhhccc-------ccCCCCHHHHHHHHHHHhCCCccCcc
Confidence            76532110           000000000000       12367899999999999998765443

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.24  E-value=9.4e-11  Score=96.19  Aligned_cols=166  Identities=16%  Similarity=0.089  Sum_probs=111.7

Q ss_pred             CCeEEEecCCCC----Ccchhhhhc-------CCCEEEEecccCCCCC-------C-----Cc---cccchhHHHHHHHH
Q 035985           15 GELKIFRADLTD----EASFDAPIS-------RSDIVFHVATPVNFSS-------D-----DP---ETDMIKPAIQGVVN   68 (293)
Q Consensus        15 ~~v~~v~~Dl~d----~~~~~~~~~-------~~d~Vih~a~~~~~~~-------~-----~~---~~~~~~~n~~~~~~   68 (293)
                      .++.++++|++|    ++++.++++       ++|++||+||......       .     ..   ....+++|+.++..
T Consensus        74 ~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~  153 (288)
T 2x9g_A           74 NTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFL  153 (288)
T ss_dssp             TCEEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHH
T ss_pred             CceEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHH
Confidence            468999999999    777776664       7999999999754211       1     11   12567899999999


Q ss_pred             HHHHHhcCC---C------ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHH
Q 035985           69 VLKACTKTK---T------VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFA  139 (293)
Q Consensus        69 l~~~~~~~~---~------~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~  139 (293)
                      +++++...-   .      ..+||++||...+.+                        ..+...|+.+|...+.+.+.++
T Consensus       154 l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------------------~~~~~~Y~asKaa~~~l~~~la  209 (288)
T 2x9g_A          154 LTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP------------------------CMAFSLYNMGKHALVGLTQSAA  209 (288)
T ss_dssp             HHHHHHHHC--------CCCEEEEEECCTTTTSC------------------------CTTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcCCCCCCCCeEEEEEecccccCC------------------------CCCCchHHHHHHHHHHHHHHHH
Confidence            988875431   1      358999999864321                        1234589999999999998887


Q ss_pred             HhC---CceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcc-eeHHhHHHHHHHhhccCC-
Q 035985          140 QEN---NIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISI-SHVEDVCRAHIFLAEKES-  214 (293)
Q Consensus       140 ~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-v~v~D~a~~~~~~~~~~~-  214 (293)
                      .+.   |+++++++|+.+.++. . ..    ......+...   .+          ..-+ ...+|+|++++.++.... 
T Consensus       210 ~e~~~~gI~vn~v~PG~v~t~~-~-~~----~~~~~~~~~~---~p----------~~r~~~~pedvA~~v~~l~s~~~~  270 (288)
T 2x9g_A          210 LELAPYGIRVNGVAPGVSLLPV-A-MG----EEEKDKWRRK---VP----------LGRREASAEQIADAVIFLVSGSAQ  270 (288)
T ss_dssp             HHHGGGTEEEEEEEESSCSCCT-T-SC----HHHHHHHHHT---CT----------TTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             HHhhccCeEEEEEEeccccCcc-c-cC----hHHHHHHHhh---CC----------CCCCCCCHHHHHHHHHHHhCcccc
Confidence            664   8999999999999886 2 11    1111111111   00          1123 679999999999987532 


Q ss_pred             -CCCc-EEEec
Q 035985          215 -ASGR-YICCA  223 (293)
Q Consensus       215 -~~~~-y~~~~  223 (293)
                       ..|. +.++|
T Consensus       271 ~itG~~i~vdG  281 (288)
T 2x9g_A          271 YITGSIIKVDG  281 (288)
T ss_dssp             TCCSCEEEEST
T ss_pred             CccCCEEEECc
Confidence             3454 46644

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.23  E-value=1.6e-10  Score=94.62  Aligned_cols=153  Identities=20%  Similarity=0.189  Sum_probs=108.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CCc---cccchhHHHHHHHHHHHHHhcC----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DDP---ETDMIKPAIQGVVNVLKACTKT----KT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~~---~~~~~~~n~~~~~~l~~~~~~~----~~   78 (293)
                      .++.++++|++|++++.++++       ++|++||+||......  ...   .+..+++|+.++.++++++...    + 
T Consensus        65 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-  143 (285)
T 3sc4_A           65 GQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-  143 (285)
T ss_dssp             SEEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-
Confidence            468999999999998888775       7999999999764221  111   1267779999999999988654    3 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      ..++|++||.....+..                       .+...|+.+|...+.+.+.++.+   .|+++..+.|+.+.
T Consensus       144 ~g~iv~isS~~~~~~~~-----------------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v  200 (285)
T 3sc4_A          144 NPHILTLSPPIRLEPKW-----------------------LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTV  200 (285)
T ss_dssp             SCEEEECCCCCCCSGGG-----------------------SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCB
T ss_pred             CcEEEEECChhhccCCC-----------------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcc
Confidence            57999999976332210                       12358999999999999998876   38999999998533


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      ...          +..... +....            ...+...+|+|++++.++..+.
T Consensus       201 ~t~----------~~~~~~-~~~~~------------~~r~~~pedvA~~~~~l~s~~~  236 (285)
T 3sc4_A          201 ATA----------AVQNLL-GGDEA------------MARSRKPEVYADAAYVVLNKPS  236 (285)
T ss_dssp             CCH----------HHHHHH-TSCCC------------CTTCBCTHHHHHHHHHHHTSCT
T ss_pred             ccH----------HHHhhc-ccccc------------ccCCCCHHHHHHHHHHHhCCcc
Confidence            221          111211 11111            1235679999999999998764

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.22  E-value=4.1e-11  Score=95.40  Aligned_cols=146  Identities=19%  Similarity=0.163  Sum_probs=102.8

Q ss_pred             CeEEEecCCCCCcchhhhhc---------CCCEEEEecccCCCCC---CC---ccccchhHHHHHHHHHHHHHhcCC-Cc
Q 035985           16 ELKIFRADLTDEASFDAPIS---------RSDIVFHVATPVNFSS---DD---PETDMIKPAIQGVVNVLKACTKTK-TV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~---------~~d~Vih~a~~~~~~~---~~---~~~~~~~~n~~~~~~l~~~~~~~~-~~   79 (293)
                      .+.++.+|++|++++.++++         ++|+|||+||......   ..   ..+..++.|+.++.++++++...- +.
T Consensus        43 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~  122 (236)
T 1ooe_A           43 SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG  122 (236)
T ss_dssp             EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred             ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence            35677899999988877764         7899999999753211   11   112678899999999999887541 02


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-----CceEEEEccCCc
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-----NIDLITVIPSLM  154 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-----~~~~~ilR~~~v  154 (293)
                      .+||++||...+.+                        ..+...|+.+|...+.+++.++.+.     ++++++++|+.+
T Consensus       123 g~iv~isS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v  178 (236)
T 1ooe_A          123 GLLQLTGAAAAMGP------------------------TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTL  178 (236)
T ss_dssp             EEEEEECCGGGGSC------------------------CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCB
T ss_pred             CEEEEECchhhccC------------------------CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcc
Confidence            58999999864332                        1234589999999999999988764     499999999998


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhh
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLA  210 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~  210 (293)
                      .++..            .......      .       ...++..+|+|++++.++
T Consensus       179 ~t~~~------------~~~~~~~------~-------~~~~~~~~dvA~~i~~~l  209 (236)
T 1ooe_A          179 DTPMN------------RKWMPNA------D-------HSSWTPLSFISEHLLKWT  209 (236)
T ss_dssp             CCHHH------------HHHSTTC------C-------GGGCBCHHHHHHHHHHHH
T ss_pred             cCcch------------hhcCCCc------c-------ccccCCHHHHHHHHHHHH
Confidence            76521            1111100      0       123467899999998666

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.22  E-value=4e-11  Score=98.05  Aligned_cols=172  Identities=19%  Similarity=0.166  Sum_probs=112.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCCC------C----ccccchhHHHHHHHHHHHHHhcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSD------D----PETDMIKPAIQGVVNVLKACTKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~------~----~~~~~~~~n~~~~~~l~~~~~~~~   77 (293)
                      .++.++++|++|++++.++++       ++|++||+||.......      +    ..+..++.|+.++..+++++...-
T Consensus        51 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~  130 (281)
T 3zv4_A           51 GNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPAL  130 (281)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence            478999999999998877764       68999999997532110      1    012567899999999998875431


Q ss_pred             --CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCC
Q 035985           78 --TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSL  153 (293)
Q Consensus        78 --~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~  153 (293)
                        +-.++|++||...+.+.                        .....|+.+|...+.+.+.++.+.  ++++..+.|+.
T Consensus       131 ~~~~g~iv~isS~~~~~~~------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~  186 (281)
T 3zv4_A          131 VSSRGSVVFTISNAGFYPN------------------------GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGG  186 (281)
T ss_dssp             HHHTCEEEEECCGGGTSSS------------------------SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECS
T ss_pred             HhcCCeEEEEecchhccCC------------------------CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCc
Confidence              02589999998644321                        223589999999999999998764  49999999999


Q ss_pred             ccCCCCCCCCCccHHH------HHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSSVAL------AATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~-~y~~~~  223 (293)
                      +..+............      ....+....   +          ..-+...+|+|++++.++..+.   ..| .++++|
T Consensus       187 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p----------~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdG  253 (281)
T 3zv4_A          187 MNTDLRGPSSLGLSEQSISSVPLADMLKSVL---P----------IGRMPALEEYTGAYVFFATRGDSLPATGALLNYDG  253 (281)
T ss_dssp             SCC--CCCTTCC--------CCHHHHHHHTC---T----------TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESS
T ss_pred             CcCCcccccccccccccccchhHHHHHHhcC---C----------CCCCCCHHHHHHHHHHhhcccccccccCcEEEECC
Confidence            9876432211000000      011111100   0          2336779999999999987332   344 556754

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.20  E-value=1.1e-10  Score=93.28  Aligned_cols=170  Identities=16%  Similarity=0.128  Sum_probs=112.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-C------CCCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-S------SDDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .++..+++|++|+++++++++       ++|++||.||.... .      .+++. ..+++|+.++..+.+++.    +.
T Consensus        56 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~p~m~~~  134 (254)
T 4fn4_A           56 KEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWE-RVLAVNLYSAFYSSRAVIPIMLKQ  134 (254)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHc
Confidence            578999999999998887764       68999999996431 1      11122 788899999988887764    33


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + -.++|++||.....+.+                        ....|+.+|.....+.+.++.+.   |+++..|-|+.
T Consensus       135 ~-~G~IVnisS~~g~~~~~------------------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~  189 (254)
T 4fn4_A          135 G-KGVIVNTASIAGIRGGF------------------------AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGT  189 (254)
T ss_dssp             T-CEEEEEECCGGGTCSSS------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred             C-CcEEEEEechhhcCCCC------------------------CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCC
Confidence            4 46999999986433221                        23489999999999999887664   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      |-.+.........-.. .+.......++            .-+...+|+|.+++.++....  ..| .+.++|
T Consensus       190 i~T~~~~~~~~~~~~~-~~~~~~~~~~~------------~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDG  249 (254)
T 4fn4_A          190 VKTNIGLGSSKPSELG-MRTLTKLMSLS------------SRLAEPEDIANVIVFLASDEASFVNGDAVVVDG  249 (254)
T ss_dssp             BCSSCTTSCSSCCHHH-HHHHHHHHTTC------------CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCcccccccCCcHHH-HHHHHhcCCCC------------CCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCC
Confidence            8766322211111111 11111111110            113458999999999887543  344 445644

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.19  E-value=1.9e-10  Score=94.32  Aligned_cols=149  Identities=14%  Similarity=0.118  Sum_probs=105.2

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEe-cccCCCCCC--Cc--cccchhHHHHHHHHHHHHHhcC---CCcc
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHV-ATPVNFSSD--DP--ETDMIKPAIQGVVNVLKACTKT---KTVK   80 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~-a~~~~~~~~--~~--~~~~~~~n~~~~~~l~~~~~~~---~~~~   80 (293)
                      ++.++.+|++|.+++.++++       ++|+|||+ |+.......  +.  ....+++|+.++.++++++...   + ..
T Consensus        79 ~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g  157 (286)
T 1xu9_A           79 SAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NG  157 (286)
T ss_dssp             EEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TC
T ss_pred             ceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CC
Confidence            68899999999988877765       79999999 565432111  11  1267889999999998887542   2 36


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-----CceEEEEccCCcc
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-----NIDLITVIPSLMS  155 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-----~~~~~ilR~~~v~  155 (293)
                      +||++||.....+                        ..+...|+.+|...+.+++.++.+.     ++++++++|+.+.
T Consensus       158 ~iv~isS~~~~~~------------------------~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~  213 (286)
T 1xu9_A          158 SIVVVSSLAGKVA------------------------YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLID  213 (286)
T ss_dssp             EEEEEEEGGGTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC
T ss_pred             EEEEECCcccccC------------------------CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccC
Confidence            9999999864321                        1234689999999999998877653     8999999999885


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      .+.           ......+       ..       ...+++.+|+|+.++.++..+.
T Consensus       214 t~~-----------~~~~~~~-------~~-------~~~~~~~~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          214 TET-----------AMKAVSG-------IV-------HMQAAPKEECALEIIKGGALRQ  247 (286)
T ss_dssp             CHH-----------HHHHSCG-------GG-------GGGCBCHHHHHHHHHHHHHTTC
T ss_pred             Chh-----------HHHhccc-------cc-------cCCCCCHHHHHHHHHHHHhcCC
Confidence            431           0111000       00       2346789999999999987653

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.19  E-value=1.9e-10  Score=100.06  Aligned_cols=166  Identities=17%  Similarity=0.093  Sum_probs=112.1

Q ss_pred             CeEEEecCCCCCcchhhhhc-------C-CCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC----C
Q 035985           16 ELKIFRADLTDEASFDAPIS-------R-SDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT----K   77 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~-~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~----~   77 (293)
                      +++++.+|++|.+++.++++       + +|+|||+||......      ++. +..+++|+.++.++.+++...    +
T Consensus       260 ~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~-~~~~~~nv~g~~~l~~~~~~~~~~~~  338 (454)
T 3u0b_A          260 GGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRW-DAVIAVNLLAPQRLTEGLVGNGTIGE  338 (454)
T ss_dssp             TCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHTTSSCT
T ss_pred             CCeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHH-HHHHHHHHHHHHHHHHHHHHhhhhcC
Confidence            57889999999998887764       3 999999999864321      112 267889999999999998765    4


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       ..+||++||...+.+..                        ....|+.+|...+.+.+.++.+   .|++++++.|+.+
T Consensus       339 -~g~iV~iSS~a~~~g~~------------------------g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v  393 (454)
T 3u0b_A          339 -GGRVIGLSSMAGIAGNR------------------------GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFI  393 (454)
T ss_dssp             -TCEEEEECCHHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSB
T ss_pred             -CCEEEEEeChHhCCCCC------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcc
Confidence             57999999987655432                        2358999999888888877654   3899999999999


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ..+...... ...   .......   ..          ...+...+|++++++.++....  ..| .++++|.
T Consensus       394 ~T~~~~~~~-~~~---~~~~~~~---~~----------l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG  449 (454)
T 3u0b_A          394 ETKMTEAIP-LAT---REVGRRL---NS----------LFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQ  449 (454)
T ss_dssp             CC--------------CHHHHHS---BT----------TSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSS
T ss_pred             cChhhhhcc-hhh---HHHHHhh---cc----------ccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCc
Confidence            765422100 000   0000000   00          1234578999999999887543  344 4566553

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.19  E-value=2.4e-10  Score=96.03  Aligned_cols=162  Identities=19%  Similarity=0.223  Sum_probs=112.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--CC---ccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--DD---PETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~~---~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++.++++|++|++++.++++       ++|+|||+||......  ..   ..+..+++|+.++.++++++.    +.+ 
T Consensus       101 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-  179 (346)
T 3kvo_A          101 GKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-  179 (346)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-
T ss_pred             CeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-
Confidence            468899999999998888775       7999999999754221  11   112678999999999999884    444 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccC
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSG  156 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G  156 (293)
                      ..+||++||...+.+..                      ......|+.+|...+.+++.++.+.  ++++..+.|+.+..
T Consensus       180 ~g~IV~iSS~~~~~~~~----------------------~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~  237 (346)
T 3kvo_A          180 VAHILNISPPLNLNPVW----------------------FKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIH  237 (346)
T ss_dssp             SCEEEEECCCCCCCGGG----------------------TSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBC
T ss_pred             CCEEEEECCHHHcCCCC----------------------CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccc
Confidence            67999999986432210                      1234589999999999999988875  79999999986433


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC-CCCcEEEec
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES-ASGRYICCA  223 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~-~~~~y~~~~  223 (293)
                      ..           +...+.+...             ...+...+|+|++++.++.... ..|.+++++
T Consensus       238 T~-----------~~~~~~~~~~-------------~~r~~~pedvA~~v~~L~s~~~~itG~~ivdg  281 (346)
T 3kvo_A          238 TA-----------AMDMLGGPGI-------------ESQCRKVDIIADAAYSIFQKPKSFTGNFVIDE  281 (346)
T ss_dssp             CH-----------HHHHHCC--C-------------GGGCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             cH-----------HHHhhccccc-------------cccCCCHHHHHHHHHHHHhcCCCCCceEEECC
Confidence            21           1122211111             1235678999999999998722 345565644

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.19  E-value=4.9e-10  Score=92.00  Aligned_cols=167  Identities=18%  Similarity=0.101  Sum_probs=112.6

Q ss_pred             CCeEEEecCCCCCc-----------------chhhhhc-------CCCEEEEecccCCCCC--C-C--------------
Q 035985           15 GELKIFRADLTDEA-----------------SFDAPIS-------RSDIVFHVATPVNFSS--D-D--------------   53 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~-----------------~~~~~~~-------~~d~Vih~a~~~~~~~--~-~--------------   53 (293)
                      .++.++++|++|++                 ++.++++       ++|++||+||......  . .              
T Consensus        60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~  139 (291)
T 1e7w_A           60 NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM  139 (291)
T ss_dssp             TCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHH
T ss_pred             CeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccccccccc
Confidence            46899999999999                 8887765       7899999999753211  0 1              


Q ss_pred             --ccccchhHHHHHHHHHHHHHhc----CCC-----ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCc
Q 035985           54 --PETDMIKPAIQGVVNVLKACTK----TKT-----VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTW  122 (293)
Q Consensus        54 --~~~~~~~~n~~~~~~l~~~~~~----~~~-----~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~  122 (293)
                        .....+++|+.++..+++++..    .+.     ..+||++||.....+                        .....
T Consensus       140 ~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~------------------------~~~~~  195 (291)
T 1e7w_A          140 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP------------------------LLGYT  195 (291)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC------------------------CTTCH
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCC------------------------CCCCc
Confidence              1125788999999999888753    220     368999999864321                        12345


Q ss_pred             hhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeH
Q 035985          123 GYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHV  199 (293)
Q Consensus       123 ~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v  199 (293)
                      .|+.+|...+.+.+.++.+.   |++++.++|+.+..+. .  ..   ......+... .  +.         ..-+...
T Consensus       196 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~---~~~~~~~~~~-~--p~---------~~r~~~p  257 (291)
T 1e7w_A          196 IYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--MP---PAVWEGHRSK-V--PL---------YQRDSSA  257 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SC---HHHHHHHHTT-C--TT---------TTSCBCH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CC---HHHHHHHHhh-C--CC---------CCCCCCH
Confidence            89999999999999887653   8999999999986654 2  11   1111211111 1  10         0035679


Q ss_pred             HhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          200 EDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       200 ~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +|+|++++.++....  ..| .+.++|
T Consensus       258 edvA~~v~~l~s~~~~~itG~~i~vdG  284 (291)
T 1e7w_A          258 AEVSDVVIFLCSSKAKYITGTCVKVDG  284 (291)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCCcccCccCcEEEECC
Confidence            999999999987532  345 446644

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.17  E-value=6.5e-11  Score=98.84  Aligned_cols=118  Identities=22%  Similarity=0.205  Sum_probs=91.2

Q ss_pred             CCeEEEecCCCCCcchhhhhcC-----CCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHH----hcCCCc
Q 035985           15 GELKIFRADLTDEASFDAPISR-----SDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKAC----TKTKTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~-----~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~   79 (293)
                      .++.++.+|++|.+++.++++.     +|++||+||.....      ..+. +..+++|+.++.++++++    ++.+ .
T Consensus        57 ~~~~~~~~Dv~d~~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~p~m~~~~-~  134 (327)
T 1jtv_A           57 GSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAV-ASVLDVNVVGTVRMLQAFLPDMKRRG-S  134 (327)
T ss_dssp             TSEEEEECCTTCHHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             CceEEEEecCCCHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHhcC-C
Confidence            4689999999999999988864     89999999975321      1112 267889999999999886    3345 6


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G  156 (293)
                      .+||++||...+.+.                        .....|+.+|...+.+++.++.+   .|+++++++|+.|..
T Consensus       135 g~IV~isS~~~~~~~------------------------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T  190 (327)
T 1jtv_A          135 GRVLVTGSVGGLMGL------------------------PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT  190 (327)
T ss_dssp             EEEEEEEEGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             CEEEEECCcccccCC------------------------CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccC
Confidence            799999998643321                        12358999999999999998774   489999999999987


Q ss_pred             CC
Q 035985          157 PS  158 (293)
Q Consensus       157 ~~  158 (293)
                      +.
T Consensus       191 ~~  192 (327)
T 1jtv_A          191 AF  192 (327)
T ss_dssp             --
T ss_pred             hH
Confidence            64

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.15  E-value=4.6e-10  Score=90.32  Aligned_cols=160  Identities=14%  Similarity=0.151  Sum_probs=104.0

Q ss_pred             CCcchhhhhc-------CCCEEEEecccC-CCCC------CCccccchhHHHHHHHHHHHHHh----cCCCccEEEEecc
Q 035985           26 DEASFDAPIS-------RSDIVFHVATPV-NFSS------DDPETDMIKPAIQGVVNVLKACT----KTKTVKRVILTSS   87 (293)
Q Consensus        26 d~~~~~~~~~-------~~d~Vih~a~~~-~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS   87 (293)
                      |++++.++++       ++|++||+||.. ....      .+. +..++.|+.++.++++++.    +.+ ..+||++||
T Consensus        55 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  132 (254)
T 1zmt_A           55 SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDY-RGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITS  132 (254)
T ss_dssp             CCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECC
Confidence            5555555543       789999999975 3111      112 2678899999999988774    334 579999999


Q ss_pred             cchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCCCCCCC
Q 035985           88 AAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSLTPDIP  164 (293)
Q Consensus        88 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~~  164 (293)
                      ...+.+.                        .+...|+.+|...+.+.+.++.+.   |+++++++|+.++|+.......
T Consensus       133 ~~~~~~~------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~  188 (254)
T 1zmt_A          133 ATPFGPW------------------------KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYP  188 (254)
T ss_dssp             STTTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCB
T ss_pred             cccccCC------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCC
Confidence            8643321                        233589999999999999887663   8999999999999886543211


Q ss_pred             ccH----HHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          165 SSV----ALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       165 ~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .-+    ......+..   ..   .       ...+.+.+|+|++++.++....  ..| .+.++|.
T Consensus       189 T~~~~~~~~~~~~~~~---~~---p-------~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG  242 (254)
T 1zmt_A          189 TEPWKTNPEHVAHVKK---VT---A-------LQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  242 (254)
T ss_dssp             HHHHTTCHHHHHHHHH---HS---S-------SSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             CcccccChHHHHHHhc---cC---C-------CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            111    000000000   00   0       1236789999999999887543  234 5566554

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.15  E-value=5.2e-10  Score=88.39  Aligned_cols=169  Identities=16%  Similarity=0.114  Sum_probs=112.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc---CCCEEEEecccCCCC----CCCccccchhHHHHHHHHHHHHHhcC---CCccEEEE
Q 035985           15 GELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNFS----SDDPETDMIKPAIQGVVNVLKACTKT---KTVKRVIL   84 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~   84 (293)
                      .++..+++|++|+++++++++   ++|++||+||.....    .+++. ..+++|+.++..+.+++...   + -.++|+
T Consensus        54 ~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~-~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVn  131 (242)
T 4b79_A           54 PRIRREELDITDSQRLQRLFEALPRLDVLVNNAGISRDREEYDLATFE-RVLRLNLSAAMLASQLARPLLAQR-GGSILN  131 (242)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHH-HHHHHHTHHHHHHHHHHHHHHHHH-CEEEEE
T ss_pred             CCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHHc-CCeEEE
Confidence            578999999999998888775   689999999975421    11223 67889999998888776432   1 268999


Q ss_pred             ecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCCCC
Q 035985           85 TSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSLTP  161 (293)
Q Consensus        85 ~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~  161 (293)
                      +||.....+.+                        ....|+.+|.....+.+.++.++   |+++..|-|+.|-.+....
T Consensus       132 isS~~~~~~~~------------------------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~  187 (242)
T 4b79_A          132 IASMYSTFGSA------------------------DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAG  187 (242)
T ss_dssp             ECCGGGTSCCS------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC----
T ss_pred             EeeccccCCCC------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhc
Confidence            99986433221                        23589999999999999887654   8999999999987663222


Q ss_pred             CCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          162 DIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .. .... ..+.+... .++            .-+...+|+|.+++.++....  ..| .+.++|.
T Consensus       188 ~~-~~~~-~~~~~~~~-~Pl------------gR~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG  238 (242)
T 4b79_A          188 LK-ADVE-ATRRIMQR-TPL------------ARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGG  238 (242)
T ss_dssp             -C-CCHH-HHHHHHHT-CTT------------CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cc-CCHH-HHHHHHhc-CCC------------CCCcCHHHHHHHHHHHhCchhcCccCceEEECcc
Confidence            11 1111 11221111 111            114568999999999886543  344 4466543

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.15  E-value=7.5e-11  Score=95.42  Aligned_cols=117  Identities=26%  Similarity=0.321  Sum_probs=88.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccC-CCC------CCCccccchhHHHHHHHHHHHHHhcC----
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPV-NFS------SDDPETDMIKPAIQGVVNVLKACTKT----   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~-~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----   76 (293)
                      .++.++++|++|++++.++++       ++|+|||+||.. ...      ..+.. ..++.|+.++.++++++...    
T Consensus        56 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~~~~~  134 (262)
T 1zem_A           56 VEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFA-RVLTINVTGAFHVLKAVSRQMITQ  134 (262)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHHhc
Confidence            468899999999998877665       789999999975 211      11122 67889999999998887643    


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~  153 (293)
                      + ..+||++||...+.+.                        .....|+.+|...+.+.+.++.+   .|+++++++|+.
T Consensus       135 ~-~g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~  189 (262)
T 1zem_A          135 N-YGRIVNTASMAGVKGP------------------------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGY  189 (262)
T ss_dssp             T-CEEEEEECCHHHHSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred             C-CcEEEEEcchhhccCC------------------------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCC
Confidence            4 5799999998644322                        12358999999999988888754   389999999998


Q ss_pred             ccCC
Q 035985          154 MSGP  157 (293)
Q Consensus       154 v~G~  157 (293)
                      +..+
T Consensus       190 v~t~  193 (262)
T 1zem_A          190 MGPG  193 (262)
T ss_dssp             BCSS
T ss_pred             cCcc
Confidence            8654

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.14  E-value=1.4e-10  Score=92.58  Aligned_cols=158  Identities=17%  Similarity=0.086  Sum_probs=108.1

Q ss_pred             CeEEEecCCCCCcchhhhhc---------CCCEEEEecccCCCCC---CCc---cccchhHHHHHHHHHHHHHhcCC-Cc
Q 035985           16 ELKIFRADLTDEASFDAPIS---------RSDIVFHVATPVNFSS---DDP---ETDMIKPAIQGVVNVLKACTKTK-TV   79 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~---------~~d~Vih~a~~~~~~~---~~~---~~~~~~~n~~~~~~l~~~~~~~~-~~   79 (293)
                      .+.++.+|++|++++.++++         ++|++||+||......   ...   .+..++.|+.++..+++++...- +-
T Consensus        47 ~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~  126 (241)
T 1dhr_A           47 ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG  126 (241)
T ss_dssp             EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred             CcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC
Confidence            35677899999988877764         6899999999754211   111   12678899999999999887541 02


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-----CceEEEEccCCc
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-----NIDLITVIPSLM  154 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-----~~~~~ilR~~~v  154 (293)
                      .+||++||...+.+.                        .+...|+.+|...+.+++.++.+.     |+++++++|+.+
T Consensus       127 g~iv~isS~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v  182 (241)
T 1dhr_A          127 GLLTLAGAKAALDGT------------------------PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTL  182 (241)
T ss_dssp             EEEEEECCGGGGSCC------------------------TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCE
T ss_pred             CEEEEECCHHHccCC------------------------CCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcc
Confidence            589999998643321                        234589999999999999987653     599999999987


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEe
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICC  222 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~  222 (293)
                      -.+.            ........      .       ...++..+|+|++++.++....  ..| .+.+.
T Consensus       183 ~T~~------------~~~~~~~~------~-------~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~  228 (241)
T 1dhr_A          183 DTPM------------NRKSMPEA------D-------FSSWTPLEFLVETFHDWITGNKRPNSGSLIQVV  228 (241)
T ss_dssp             ECHH------------HHHHSTTS------C-------GGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEE
T ss_pred             cCcc------------ccccCcch------h-------hccCCCHHHHHHHHHHHhcCCCcCccceEEEEe
Confidence            5431            11111100      0       1235778999999999887543  234 44553

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.13  E-value=6.1e-10  Score=88.54  Aligned_cols=162  Identities=14%  Similarity=0.201  Sum_probs=111.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC---CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT---KT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~   78 (293)
                      +++..+++|++|+++++++++       ++|++||.||.....      .++.. ..+++|+.++..+.+++...   + 
T Consensus        47 ~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~~~m~~~-  124 (247)
T 3ged_A           47 PNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFD-YILSVGLKAPYELSRLCRDELIKN-  124 (247)
T ss_dssp             TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHT-
T ss_pred             CCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHH-HHHHHHhHHHHHHHHHHHHHHhhc-
Confidence            578999999999998887764       689999999875421      11223 78889999998888776432   2 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccC
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSG  156 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G  156 (293)
                      -.++|++||.....+.+                        ....|+.+|.....+.+.++.+.  ++++..|-|+.|-.
T Consensus       125 ~G~IInisS~~~~~~~~------------------------~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t  180 (247)
T 3ged_A          125 KGRIINIASTRAFQSEP------------------------DSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINV  180 (247)
T ss_dssp             TCEEEEECCGGGTSCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCC
T ss_pred             CCcEEEEeecccccCCC------------------------CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCC
Confidence            26899999986433221                        22489999999999999887765  79999999998854


Q ss_pred             CCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCc-EEEec
Q 035985          157 PSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGR-YICCA  223 (293)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~-y~~~~  223 (293)
                      +...    ........   .    ++.          .-+...+|+|.+++.++++....|. +.++|
T Consensus       181 ~~~~----~~~~~~~~---~----~Pl----------~R~g~pediA~~v~fL~s~~~iTG~~i~VDG  227 (247)
T 3ged_A          181 TEQQ----EFTQEDCA---A----IPA----------GKVGTPKDISNMVLFLCQQDFITGETIIVDG  227 (247)
T ss_dssp             CC-------CCHHHHH---T----STT----------SSCBCHHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred             CCcH----HHHHHHHh---c----CCC----------CCCcCHHHHHHHHHHHHhCCCCCCCeEEECc
Confidence            4321    11111111   1    111          1145689999999999876555554 46644

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.12  E-value=3.5e-10  Score=91.21  Aligned_cols=171  Identities=20%  Similarity=0.208  Sum_probs=111.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC-CCcc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT-KTVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~   80 (293)
                      .++..+++|++|+++++++++       ++|++||.||.....      .+++. ..++.|+.++..+++++... .+-.
T Consensus        75 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~-~~~~vNl~g~~~~~~~~~p~m~~~G  153 (273)
T 4fgs_A           75 GGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYD-DTFDRNVKGVLFTVQKALPLLARGS  153 (273)
T ss_dssp             TTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHH-HHHHHHTHHHHHHHHHHTTTEEEEE
T ss_pred             CCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHH-HHHHHHhHHHHHHHHHHHHHHhhCC
Confidence            468899999999998887764       689999999975421      11223 78899999999999988654 1135


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~  157 (293)
                      ++|++||.....+.+                        ....|+.+|.....+.+.++.+.   |+++..|-|+.|-.+
T Consensus       154 ~IInisS~~~~~~~~------------------------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~  209 (273)
T 4fgs_A          154 SVVLTGSTAGSTGTP------------------------AFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETT  209 (273)
T ss_dssp             EEEEECCGGGGSCCT------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-
T ss_pred             eEEEEeehhhccCCC------------------------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCh
Confidence            799999976433221                        23589999999999999998775   799999999998765


Q ss_pred             CCCCCCCcc---HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          158 SLTPDIPSS---VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       158 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .........   ...+...+...   ++.          .-+...+|+|.+++.++....  ..| .+.++|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~---~Pl----------gR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDG  268 (273)
T 4fgs_A          210 GLVELAGKDPVQQQGLLNALAAQ---VPM----------GRVGRAEEVAAAALFLASDDSSFVTGAELFVDG  268 (273)
T ss_dssp             --------CHHHHHHHHHHHHHH---STT----------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hHHHhhccCchhhHHHHHHHHhc---CCC----------CCCcCHHHHHHHHHHHhCchhcCccCCeEeECc
Confidence            432211110   01111111111   111          114568999999999887543  345 445654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.11  E-value=9e-10  Score=88.19  Aligned_cols=148  Identities=15%  Similarity=0.179  Sum_probs=104.4

Q ss_pred             CCeEEEecCC--CCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHH----h
Q 035985           15 GELKIFRADL--TDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKAC----T   74 (293)
Q Consensus        15 ~~v~~v~~Dl--~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~----~   74 (293)
                      +++.++.+|+  +|.+++.++++       ++|++||+||.....       ..+.. ..++.|+.++.++++++    +
T Consensus        64 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~-~~~~~N~~g~~~l~~~~~~~~~  142 (247)
T 3i1j_A           64 PQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFM-QVMHVNVNATFMLTRALLPLLK  142 (247)
T ss_dssp             CCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHH-HHHHHhhHHHHHHHHHHHHHHH
Confidence            4677888877  88877776654       789999999975311       11222 67889999999999988    4


Q ss_pred             cCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh----CCceEEEEc
Q 035985           75 KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE----NNIDLITVI  150 (293)
Q Consensus        75 ~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~----~~~~~~ilR  150 (293)
                      +.+ ..++|++||.....+                        ..+...|+.+|...+.+++.++.+    .++++..+.
T Consensus       143 ~~~-~~~iv~isS~~~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~  197 (247)
T 3i1j_A          143 RSE-DASIAFTSSSVGRKG------------------------RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSIN  197 (247)
T ss_dssp             TSS-SEEEEEECCGGGTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEE
T ss_pred             hCC-CCeEEEEcchhhcCC------------------------CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEe
Confidence            444 679999999764332                        123458999999999999988765    478999999


Q ss_pred             cCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          151 PSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       151 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      |+.+-.+.           ....... .             ....+...+|+|++++.++...
T Consensus       198 PG~v~t~~-----------~~~~~~~-~-------------~~~~~~~p~dva~~~~~l~s~~  235 (247)
T 3i1j_A          198 PGATRTGM-----------RAQAYPD-E-------------NPLNNPAPEDIMPVYLYLMGPD  235 (247)
T ss_dssp             CCCCSSHH-----------HHHHSTT-S-------------CGGGSCCGGGGTHHHHHHHSGG
T ss_pred             cCcccCcc-----------chhcccc-c-------------CccCCCCHHHHHHHHHHHhCch
Confidence            99875421           1111111 0             0133566899999999988754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.09  E-value=3.6e-10  Score=91.98  Aligned_cols=159  Identities=15%  Similarity=0.218  Sum_probs=108.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--C---CccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--D---DPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~---~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++.++++|++|++++.++++       ++|++||+||......  .   +..+..+++|+.++..+++++.    +.+ 
T Consensus        62 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-  140 (274)
T 3e03_A           62 GQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-  140 (274)
T ss_dssp             SEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-
T ss_pred             CeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-
Confidence            468899999999998887765       6899999999753211  0   1112678899999999988874    334 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ..++|++||.....+..                      ..+...|+.+|...+.+.+.++.+.   |+++..+.|+.+.
T Consensus       141 ~g~iv~isS~~~~~~~~----------------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v  198 (274)
T 3e03_A          141 NPHILTLAPPPSLNPAW----------------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVI  198 (274)
T ss_dssp             SCEEEECCCCCCCCHHH----------------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCB
T ss_pred             CceEEEECChHhcCCCC----------------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCccc
Confidence            57999999976433210                      0123479999999999999887764   7999999998544


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcEEE
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRYIC  221 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y~~  221 (293)
                      .....           ....+..              ...+...+|+|++++.++....  ..|.++.
T Consensus       199 ~T~~~-----------~~~~~~~--------------~~~~~~pedvA~~v~~l~s~~~~~itG~~i~  241 (274)
T 3e03_A          199 ATDAI-----------NMLPGVD--------------AAACRRPEIMADAAHAVLTREAAGFHGQFLI  241 (274)
T ss_dssp             CC------------------CCC--------------GGGSBCTHHHHHHHHHHHTSCCTTCCSCEEE
T ss_pred             ccchh-----------hhccccc--------------ccccCCHHHHHHHHHHHhCccccccCCeEEE
Confidence            33210           1111110              1225679999999999987643  3455544

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.06  E-value=1.3e-09  Score=89.76  Aligned_cols=158  Identities=15%  Similarity=0.053  Sum_probs=102.3

Q ss_pred             Ccchhhhhc-------CCCEEEEecccCC---CC-----CCCccccchhHHHHHHHHHHHHHhcCC-CccEEEEecccch
Q 035985           27 EASFDAPIS-------RSDIVFHVATPVN---FS-----SDDPETDMIKPAIQGVVNVLKACTKTK-TVKRVILTSSAAA   90 (293)
Q Consensus        27 ~~~~~~~~~-------~~d~Vih~a~~~~---~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~   90 (293)
                      ++++.++++       ++|++||+||...   ..     ..+.. ..+++|+.++.++++++...= +-.++|++||...
T Consensus       103 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~  181 (297)
T 1d7o_A          103 NWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYL-AAISASSYSFVSLLSHFLPIMNPGGASISLTYIAS  181 (297)
T ss_dssp             CCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHH-HHHHHhhhHHHHHHHHHHHHhccCceEEEEecccc
Confidence            556665553       6899999998532   11     11122 678899999999999997641 0258999999764


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCC-chhHHHHHHHHHHHHHHHHh----CCceEEEEccCCccCCCCCCCCCc
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPT-WGYAASKTLAERAACKFAQE----NNIDLITVIPSLMSGPSLTPDIPS  165 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~-~~Y~~~K~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~  165 (293)
                      ..+.+                        .. ..|+.+|...+.+.+.++.+    .|+++++++|+.+.++.....  .
T Consensus       182 ~~~~~------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~--~  235 (297)
T 1d7o_A          182 ERIIP------------------------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI--G  235 (297)
T ss_dssp             TSCCT------------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC--S
T ss_pred             ccCCC------------------------CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc--c
Confidence            33211                        11 37999999999999888754    489999999999998764321  1


Q ss_pred             cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          166 SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ....+...+...   .+          ...+..++|+|++++.++....  ..| .++++|.
T Consensus       236 ~~~~~~~~~~~~---~p----------~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG  284 (297)
T 1d7o_A          236 FIDTMIEYSYNN---AP----------IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             HHHHHHHHHHHH---SS----------SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ccHHHHHHhhcc---CC----------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            112221211110   00          1235679999999999887532  234 5566543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.05  E-value=1.1e-09  Score=90.81  Aligned_cols=141  Identities=19%  Similarity=0.189  Sum_probs=91.5

Q ss_pred             CCeEEEecCCCCC-cchhhhhc-------CCCEEEEecccCCCC------------------------------------
Q 035985           15 GELKIFRADLTDE-ASFDAPIS-------RSDIVFHVATPVNFS------------------------------------   50 (293)
Q Consensus        15 ~~v~~v~~Dl~d~-~~~~~~~~-------~~d~Vih~a~~~~~~------------------------------------   50 (293)
                      .++.++.+|++|+ +.+.++++       ++|+|||+||.....                                    
T Consensus        62 ~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (311)
T 3o26_A           62 ENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSET  141 (311)
T ss_dssp             CSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECC
T ss_pred             CceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccc
Confidence            4799999999998 76666554       799999999975321                                    


Q ss_pred             CCCccccchhHHHHHHHHHHHHHh----cCCCccEEEEecccchhcccccCCC--CccccCCCCCchh------------
Q 035985           51 SDDPETDMIKPAIQGVVNVLKACT----KTKTVKRVILTSSAAAVSINAQNVT--GLVMDEKNWTDVE------------  112 (293)
Q Consensus        51 ~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~--~~~~~E~~~~~~~------------  112 (293)
                      .... +..+++|+.++..+++++.    +.+ ..+||++||.....+......  ....+++.+....            
T Consensus       142 ~~~~-~~~~~~N~~g~~~l~~~~~~~l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (311)
T 3o26_A          142 YELA-EECLKINYNGVKSVTEVLIPLLQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDF  219 (311)
T ss_dssp             HHHH-HHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHH
T ss_pred             hhhh-hhheeeeeehHHHHHHHhhHhhccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhh
Confidence            0111 2568999999888888774    334 579999999875443211000  0000000000000            


Q ss_pred             -----hhccCCCCCchhHHHHHHHHHHHHHHHHhC-CceEEEEccCCccCC
Q 035985          113 -----FLSSEKPPTWGYAASKTLAERAACKFAQEN-NIDLITVIPSLMSGP  157 (293)
Q Consensus       113 -----~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~  157 (293)
                           .......+...|+.+|...+.+++.++.++ ++++..+.|+.|..+
T Consensus       220 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~  270 (311)
T 3o26_A          220 KENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTE  270 (311)
T ss_dssp             HTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSG
T ss_pred             hccccccccCcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecC
Confidence                 000011234689999999999999999886 699999999988654

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.04  E-value=1.7e-09  Score=85.64  Aligned_cols=170  Identities=15%  Similarity=0.130  Sum_probs=113.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCCCccEE
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTKTVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~   82 (293)
                      .++..+++|++|++.++++++  ++|++||.||.....      .+++. ..+++|+.++..+.+++.    +.++-.++
T Consensus        56 ~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~-~~~~vNl~g~f~~~~~~~~~m~~~g~~G~I  134 (247)
T 4hp8_A           56 GNASALLIDFADPLAAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWD-EVMDVNLKALFFTTQAFAKELLAKGRSGKV  134 (247)
T ss_dssp             CCEEEEECCTTSTTTTTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CcEEEEEccCCCHHHHHHHHHhCCCCEEEECCCCCCCCCcccccHHHHH-HHHHHHhHHHHHHHHHHHHHHHHhCCCcEE
Confidence            578999999999999988876  689999999976422      11223 788899999998888653    22324689


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSL  159 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~  159 (293)
                      |++||.....+.+                        ....|+.+|.....+.+.++.++   |+++..|-|+.|-.+..
T Consensus       135 VnisS~~~~~g~~------------------------~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~  190 (247)
T 4hp8_A          135 VNIASLLSFQGGI------------------------RVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNT  190 (247)
T ss_dssp             EEECCGGGTSCCS------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             EEEechhhCCCCC------------------------CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcch
Confidence            9999986433221                        23489999999999999887664   89999999998865421


Q ss_pred             CCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          160 TPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .....  -....+.+... .++            .-+-..+|+|.+++.++....  ..| .+.++|.
T Consensus       191 ~~~~~--~~~~~~~~~~~-~Pl------------gR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          191 EALRA--DAARNKAILER-IPA------------GRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGG  243 (247)
T ss_dssp             HHHHT--SHHHHHHHHTT-CTT------------SSCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhccc--CHHHHHHHHhC-CCC------------CCCcCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence            10000  00111111111 111            114568999999999887543  334 4466543

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.02  E-value=1.3e-09  Score=87.44  Aligned_cols=173  Identities=17%  Similarity=0.153  Sum_probs=112.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCCCC----ccccchhHHHHHHHHHHHHHhcC---CCcc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSDD----PETDMIKPAIQGVVNVLKACTKT---KTVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~---~~~~   80 (293)
                      .++.++++|++|+++++++++       ++|++||.||.......+    .....++.|+.++..+.+++...   + -.
T Consensus        55 ~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G  133 (258)
T 4gkb_A           55 PRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RG  133 (258)
T ss_dssp             TTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TC
T ss_pred             CCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CC
Confidence            578999999999988877654       689999999975322111    11267889999998888776422   2 25


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~  157 (293)
                      ++|++||.....+.+                        ....|+.+|.....+.+.++.+.   |+++..|-|+.|-.+
T Consensus       134 ~IVnisS~~~~~~~~------------------------~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~  189 (258)
T 4gkb_A          134 AIVNISSKTAVTGQG------------------------NTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTP  189 (258)
T ss_dssp             EEEEECCTHHHHCCS------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCS
T ss_pred             eEEEEeehhhccCCC------------------------CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCh
Confidence            899999987544322                        23489999999999999887653   899999999998765


Q ss_pred             CCCCCCCcc--HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          158 SLTPDIPSS--VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       158 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .........  .......+....+ +           ..-+...+|+|.+++.++....  ..| .+.++|.
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~p-l-----------g~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG  249 (258)
T 4gkb_A          190 LYRNWIATFEDPEAKLAEIAAKVP-L-----------GRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGG  249 (258)
T ss_dssp             CC-----------CHHHHHHTTCT-T-----------TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hHhhhhhcccChHHHHHHHHhcCC-C-----------CCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCC
Confidence            432110000  0001111111111 1           0225568999999999886543  345 4466543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=98.99  E-value=5.3e-10  Score=97.93  Aligned_cols=155  Identities=15%  Similarity=0.120  Sum_probs=111.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecccC-CCCC-C--Cc--cccchhHHHHHHHHHHHHHhcCCCccEE
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVATPV-NFSS-D--DP--ETDMIKPAIQGVVNVLKACTKTKTVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~-~~~~-~--~~--~~~~~~~n~~~~~~l~~~~~~~~~~~~~   82 (293)
                      .++.++.+|++|++++.++++      .+|+|||+||.. .... .  ..  ....++.|+.++.++.+++...+ ..+|
T Consensus       292 ~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~i  370 (496)
T 3mje_A          292 VRVTIAACDAADREALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAF  370 (496)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEE
T ss_pred             CeEEEEEccCCCHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEE
Confidence            468999999999999988875      479999999986 3211 1  11  12678899999999999999887 7899


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD  162 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~  162 (293)
                      |++||...+.+...                        ...|+.+|...+.+.+.+.. .|+++++|.|+.+.+.+....
T Consensus       371 V~~SS~a~~~g~~g------------------------~~~YaAaKa~ldala~~~~~-~Gi~v~sV~pG~w~~~gm~~~  425 (496)
T 3mje_A          371 VLFSSGAAVWGSGG------------------------QPGYAAANAYLDALAEHRRS-LGLTASSVAWGTWGEVGMATD  425 (496)
T ss_dssp             EEEEEHHHHTTCTT------------------------CHHHHHHHHHHHHHHHHHHH-TTCCCEEEEECEESSSCC---
T ss_pred             EEEeChHhcCCCCC------------------------cHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCcccCCccccC
Confidence            99999876654432                        24899999999998887654 499999999998876653221


Q ss_pred             CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC
Q 035985          163 IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA  215 (293)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~  215 (293)
                      .     .....+...               ....+..++.++++..++..+..
T Consensus       426 ~-----~~~~~l~~~---------------g~~~l~pe~~~~~l~~~l~~~~~  458 (496)
T 3mje_A          426 P-----EVHDRLVRQ---------------GVLAMEPEHALGALDQMLENDDT  458 (496)
T ss_dssp             --------CHHHHHT---------------TEEEECHHHHHHHHHHHHHHTCS
T ss_pred             h-----HHHHHHHhc---------------CCCCCCHHHHHHHHHHHHcCCCc
Confidence            0     000111000               12345688999999999886543

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.99  E-value=1.3e-09  Score=87.00  Aligned_cols=170  Identities=18%  Similarity=0.167  Sum_probs=111.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++..+++|++|+++++++++       ++|++||+||.....      .+++. ..+++|+.++..+.+++.    +.+
T Consensus        58 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~p~m~~~~  136 (255)
T 4g81_D           58 YDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQ-KVIDTNLTSAFLVSRSAAKRMIARN  136 (255)
T ss_dssp             CCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcc
Confidence            478899999999998877764       589999999976422      11222 778899999988887663    222


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      +-.++|++||.....+.+                        ....|+.+|.....+.+.++.+.   |+++..|-|+.|
T Consensus       137 ~~G~IVnisS~~~~~~~~------------------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i  192 (255)
T 4g81_D          137 SGGKIINIGSLTSQAARP------------------------TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYI  192 (255)
T ss_dssp             CCEEEEEECCGGGTSBCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             CCCEEEEEeehhhcCCCC------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCC
Confidence            246999999986433221                        23489999999999999887654   899999999998


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ..+........  ......+.. .  ++.          .-+...+|+|.+++.++....  ..| .+.++|.
T Consensus       193 ~T~~~~~~~~~--~~~~~~~~~-~--~Pl----------~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          193 LTDMNTALIED--KQFDSWVKS-S--TPS----------QRWGRPEELIGTAIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             CCGGGHHHHTC--HHHHHHHHH-H--STT----------CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCchhhcccCC--HHHHHHHHh-C--CCC----------CCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence            65531100000  011111111 1  111          114568999999999886543  344 4466554

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=98.98  E-value=1.4e-09  Score=87.78  Aligned_cols=117  Identities=15%  Similarity=0.127  Sum_probs=88.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc---------CCC--EEEEecccCCC---------CCCCccccchhHHHHHHHHHHHHHh
Q 035985           15 GELKIFRADLTDEASFDAPIS---------RSD--IVFHVATPVNF---------SSDDPETDMIKPAIQGVVNVLKACT   74 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---------~~d--~Vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~   74 (293)
                      .++.++++|++|++++.++++         .+|  ++||+||....         ...+. +..++.|+.++.++++++.
T Consensus        60 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~  138 (259)
T 1oaa_A           60 LKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEV-NNYWALNLTSMLCLTSGTL  138 (259)
T ss_dssp             SEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHH-HHHHHHHTHHHHHHHHHHH
T ss_pred             CeEEEEecCCCCHHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            368899999999988877653         368  99999997532         11112 2678899999999999886


Q ss_pred             cCC-----CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-CceEEE
Q 035985           75 KTK-----TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-NIDLIT  148 (293)
Q Consensus        75 ~~~-----~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-~~~~~i  148 (293)
                      ..-     ...+||++||...+.+                        ..+...|+.+|...+.+.+.++.+. ++++..
T Consensus       139 ~~~~~~~~~~g~iv~isS~~~~~~------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~  194 (259)
T 1oaa_A          139 NAFQDSPGLSKTVVNISSLCALQP------------------------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLS  194 (259)
T ss_dssp             HTSCCCTTCEEEEEEECCGGGTSC------------------------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred             HHHhhccCCCceEEEEcCchhcCC------------------------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEE
Confidence            431     1468999999864321                        1234589999999999999998876 488999


Q ss_pred             EccCCccC
Q 035985          149 VIPSLMSG  156 (293)
Q Consensus       149 lR~~~v~G  156 (293)
                      +.|+.+-.
T Consensus       195 v~PG~v~T  202 (259)
T 1oaa_A          195 YAPGPLDN  202 (259)
T ss_dssp             EECCSBSS
T ss_pred             ecCCCcCc
Confidence            99988744

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.97  E-value=6.1e-09  Score=83.79  Aligned_cols=171  Identities=12%  Similarity=0.026  Sum_probs=110.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCcc---ccchhHHHHHHHHHHHHHhcCC-
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPE---TDMIKPAIQGVVNVLKACTKTK-   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~---~~~~~~n~~~~~~l~~~~~~~~-   77 (293)
                      +++.++++|++|++++.++++       ++|++||+||.....      .+...   ...++.|+.+...+.+++...- 
T Consensus        58 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~  137 (256)
T 4fs3_A           58 PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP  137 (256)
T ss_dssp             SSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            578999999999998877664       689999999865311      01111   1345677888777777765431 


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      +-.++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..|.|+.|
T Consensus       138 ~~G~IVnisS~~~~~~~------------------------~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i  193 (256)
T 4fs3_A          138 EGGSIVATTYLGGEFAV------------------------QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPI  193 (256)
T ss_dssp             TCEEEEEEECGGGTSCC------------------------TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC
T ss_pred             cCCEEEEEeccccccCc------------------------ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCC
Confidence            13589999997643321                        123589999999999999887653   899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      -.+.....  .......+.+...   ++.          .-+...+|+|.+++.++....  ..| .+.++|.
T Consensus       194 ~T~~~~~~--~~~~~~~~~~~~~---~Pl----------~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          194 RTLSAKGV--GGFNTILKEIKER---APL----------KRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             CSGGGTTC--TTHHHHHHHHHHH---STT----------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CChhhhhc--cCCHHHHHHHHhc---CCC----------CCCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence            66533221  1112222222111   111          114568999999999886543  344 4466543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=98.96  E-value=2.9e-09  Score=85.91  Aligned_cols=117  Identities=14%  Similarity=0.168  Sum_probs=85.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc--------CCCEEEEecc--cC-------C----CCCCCccccchhHHHHHHHHHHHHH
Q 035985           15 GELKIFRADLTDEASFDAPIS--------RSDIVFHVAT--PV-------N----FSSDDPETDMIKPAIQGVVNVLKAC   73 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--------~~d~Vih~a~--~~-------~----~~~~~~~~~~~~~n~~~~~~l~~~~   73 (293)
                      .++.++++|++|++++.++++        .+|++||+||  ..       .    ....+.. ..++.|+.++..+.+++
T Consensus        54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~  132 (260)
T 2qq5_A           54 GQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWD-DINNVGLRGHYFCSVYG  132 (260)
T ss_dssp             SEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHH-HHHTTTTHHHHHHHHHH
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHH-HHHhhcchhHHHHHHHH
Confidence            368899999999988776643        5799999994  21       1    1111122 66778888887776655


Q ss_pred             h----cCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceE
Q 035985           74 T----KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDL  146 (293)
Q Consensus        74 ~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~  146 (293)
                      .    +.+ ..+||++||.....+                         .+...|+.+|...+.+.+.++.+   .|+++
T Consensus       133 ~~~~~~~~-~g~iv~isS~~~~~~-------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v  186 (260)
T 2qq5_A          133 ARLMVPAG-QGLIVVISSPGSLQY-------------------------MFNVPYGVGKAACDKLAADCAHELRRHGVSC  186 (260)
T ss_dssp             HHHHGGGT-CCEEEEECCGGGTSC-------------------------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             HHHHhhcC-CcEEEEEcChhhcCC-------------------------CCCCchHHHHHHHHHHHHHHHHHhccCCeEE
Confidence            3    445 579999999863211                         12358999999999999988764   48999


Q ss_pred             EEEccCCccCCC
Q 035985          147 ITVIPSLMSGPS  158 (293)
Q Consensus       147 ~ilR~~~v~G~~  158 (293)
                      ++++|+.+..+.
T Consensus       187 ~~v~PG~v~T~~  198 (260)
T 2qq5_A          187 VSLWPGIVQTEL  198 (260)
T ss_dssp             EEEECCCSCTTT
T ss_pred             EEEecCccccHH
Confidence            999999998764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=98.92  E-value=1.5e-09  Score=88.00  Aligned_cols=117  Identities=13%  Similarity=0.050  Sum_probs=88.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc----------CCCEEEEecccCCC-----C------CCCccccchhHHHHHHHHHHHHH
Q 035985           15 GELKIFRADLTDEASFDAPIS----------RSDIVFHVATPVNF-----S------SDDPETDMIKPAIQGVVNVLKAC   73 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~----------~~d~Vih~a~~~~~-----~------~~~~~~~~~~~n~~~~~~l~~~~   73 (293)
                      .++.++++|++|++++.++++          ++|++||+||....     .      ..+. +..++.|+.++..+++++
T Consensus        56 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~  134 (269)
T 2h7i_A           56 AKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADV-SKGIHISAYSYASMAKAL  134 (269)
T ss_dssp             SCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHH-HHHHHHHTHHHHHHHHHH
T ss_pred             CCceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHH-HHHHHHhhHHHHHHHHHH
Confidence            368899999999998887775          79999999997541     1      0111 256889999999999998


Q ss_pred             hcCC-CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEE
Q 035985           74 TKTK-TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITV  149 (293)
Q Consensus        74 ~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~il  149 (293)
                      ...- +-.+||++||... ++                        ......|+.+|...+.+.+.++.+.   |+++.++
T Consensus       135 ~~~~~~~g~iv~iss~~~-~~------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v  189 (269)
T 2h7i_A          135 LPIMNPGGSIVGMDFDPS-RA------------------------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLV  189 (269)
T ss_dssp             GGGEEEEEEEEEEECCCS-SC------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             HHhhccCCeEEEEcCccc-cc------------------------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEE
Confidence            7541 0258999998652 21                        1133589999999999999887663   8999999


Q ss_pred             ccCCccCC
Q 035985          150 IPSLMSGP  157 (293)
Q Consensus       150 R~~~v~G~  157 (293)
                      +|+.+..+
T Consensus       190 ~PG~v~T~  197 (269)
T 2h7i_A          190 AAGPIRTL  197 (269)
T ss_dssp             EECCCCCH
T ss_pred             ecCcccch
Confidence            99988654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.88  E-value=4.8e-09  Score=83.80  Aligned_cols=161  Identities=12%  Similarity=0.065  Sum_probs=100.5

Q ss_pred             CCcchhhhhc-------CCCEEEEecccCCC---CC-CC----ccccchhHHHHHHHHHHHHHh----cCCCccEEEEec
Q 035985           26 DEASFDAPIS-------RSDIVFHVATPVNF---SS-DD----PETDMIKPAIQGVVNVLKACT----KTKTVKRVILTS   86 (293)
Q Consensus        26 d~~~~~~~~~-------~~d~Vih~a~~~~~---~~-~~----~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~S   86 (293)
                      |.+++.++++       ++|++||+||....   .. .+    ..+..++.|+.++.++++++.    +.+ ..+||++|
T Consensus        55 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~is  133 (244)
T 1zmo_A           55 AEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFIT  133 (244)
T ss_dssp             CCCCGGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEC
Confidence            5555555443       68999999997543   11 11    112678899999999888775    444 57999999


Q ss_pred             ccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCCCCCC
Q 035985           87 SAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSLTPDI  163 (293)
Q Consensus        87 S~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~~~  163 (293)
                      |...+.+.                        .....|+.+|...+.+.+.++.+.   |+++++++|+.+-.+..... 
T Consensus       134 S~~~~~~~------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-  188 (244)
T 1zmo_A          134 SSVGKKPL------------------------AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPT-  188 (244)
T ss_dssp             CGGGTSCC------------------------TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCH-
T ss_pred             ChhhCCCC------------------------CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc-
Confidence            98643321                        123589999999999999887653   89999999998866532000 


Q ss_pred             CccH-HHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          164 PSSV-ALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       164 ~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      .... ......+....  .+          ..-+...+|+|++++.++....  ..| .+.++|.
T Consensus       189 ~~~~~~~~~~~~~~~~--~p----------~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          189 SDWENNPELRERVDRD--VP----------LGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             HHHHHCHHHHHHHHHH--CT----------TCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             ccccchHHHHHHHhcC--CC----------CCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence            0000 00001110000  00          1235679999999999887543  234 4456543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=98.84  E-value=5.7e-09  Score=86.69  Aligned_cols=151  Identities=21%  Similarity=0.181  Sum_probs=103.8

Q ss_pred             EecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCCccEE
Q 035985           20 FRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKTVKRV   82 (293)
Q Consensus        20 v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~   82 (293)
                      +.+|+++.+++.++++       ++|++||+||......      .+.. ..+++|+.++.++++++.    +.+ ..+|
T Consensus        69 ~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~-~~~~vN~~g~~~l~~~~~~~m~~~~-~grI  146 (319)
T 1gz6_A           69 AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWD-IIQRVHLRGSFQVTRAAWDHMKKQN-YGRI  146 (319)
T ss_dssp             EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT-CEEE
T ss_pred             EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHHcC-CCEE
Confidence            3579999987766543       6899999999764221      1122 678899999998888773    345 5799


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSL  159 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~  159 (293)
                      |++||....++..                        +...|+.+|...+.+.+.++.+.   |+++++++|+.+ .+..
T Consensus       147 V~vsS~~~~~~~~------------------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~  201 (319)
T 1gz6_A          147 IMTASASGIYGNF------------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT  201 (319)
T ss_dssp             EEECCHHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT
T ss_pred             EEECChhhccCCC------------------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc
Confidence            9999986555322                        23589999999999999988764   899999999976 3210


Q ss_pred             CCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC-CCC-cEEEec
Q 035985          160 TPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES-ASG-RYICCA  223 (293)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~-~~~-~y~~~~  223 (293)
                      .    ...              . ..       ...++..+|+|.+++.++..+. ..| .|.++|
T Consensus       202 ~----~~~--------------~-~~-------~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~G  241 (319)
T 1gz6_A          202 E----TVM--------------P-ED-------LVEALKPEYVAPLVLWLCHESCEENGGLFEVGA  241 (319)
T ss_dssp             G----GGS--------------C-HH-------HHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEET
T ss_pred             c----ccC--------------C-hh-------hhccCCHHHHHHHHHHHhCchhhcCCCEEEECC
Confidence            0    000              0 00       1234578999999999887643 234 455554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=98.83  E-value=3e-08  Score=79.67  Aligned_cols=118  Identities=18%  Similarity=0.164  Sum_probs=86.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--------CCccccchhHHHHHHHHHHHHHh----c
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--------DDPETDMIKPAIQGVVNVLKACT----K   75 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~   75 (293)
                      +....+++|++|++++.++++       ++|++||+||......        +++. ..+++|+.++..+.+++.    +
T Consensus        50 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~p~m~~  128 (261)
T 4h15_A           50 PEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWY-NELSLNLFAAVRLDRQLVPDMVA  128 (261)
T ss_dssp             CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHH-HHHHHHhHHHHHHHHhhchhhhh
Confidence            345678999999998777654       6899999998643211        1122 678899999988877664    3


Q ss_pred             CCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccC
Q 035985           76 TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPS  152 (293)
Q Consensus        76 ~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~  152 (293)
                      .+ -.++|++||.....+.+                       .....|+.+|...+.+.+.++.+.   |+++..|.|+
T Consensus       129 ~~-~G~Iv~isS~~~~~~~~-----------------------~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG  184 (261)
T 4h15_A          129 RG-SGVVVHVTSIQRVLPLP-----------------------ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPG  184 (261)
T ss_dssp             HT-CEEEEEECCGGGTSCCT-----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             cC-CceEEEEEehhhccCCC-----------------------CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCC
Confidence            34 46899999976432211                       123579999999999999887653   8999999999


Q ss_pred             CccCC
Q 035985          153 LMSGP  157 (293)
Q Consensus       153 ~v~G~  157 (293)
                      .|-.+
T Consensus       185 ~i~T~  189 (261)
T 4h15_A          185 WIETE  189 (261)
T ss_dssp             CBCCH
T ss_pred             CcCCc
Confidence            88543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=98.81  E-value=3.9e-09  Score=93.40  Aligned_cols=174  Identities=13%  Similarity=0.081  Sum_probs=117.9

Q ss_pred             CCeEEEecCCCCCcchhhhhcC------CCEEEEecccCCCCCC---C--ccccchhHHHHHHHHHHHHHhcCCC----c
Q 035985           15 GELKIFRADLTDEASFDAPISR------SDIVFHVATPVNFSSD---D--PETDMIKPAIQGVVNVLKACTKTKT----V   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~------~d~Vih~a~~~~~~~~---~--~~~~~~~~n~~~~~~l~~~~~~~~~----~   79 (293)
                      .++.++.+|++|.+++.++++.      +|+|||+||......-   +  ..+..++.|+.|+.++.+++.....    .
T Consensus       315 ~~v~~~~~Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~  394 (525)
T 3qp9_A          315 ATATVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRP  394 (525)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CC
T ss_pred             CEEEEEECCCCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCC
Confidence            4689999999999999888764      6999999998643211   1  1126788999999999999876531    4


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSL  159 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~  159 (293)
                      .+||++||...+.+...                        ...|+.+|...+.+...+.. .|+++++|.|+.+ +.+.
T Consensus       395 ~~iV~~SS~a~~~g~~g------------------------~~~YaaaKa~l~~lA~~~~~-~gi~v~sI~pG~~-~tgm  448 (525)
T 3qp9_A          395 PVLVLFSSVAAIWGGAG------------------------QGAYAAGTAFLDALAGQHRA-DGPTVTSVAWSPW-EGSR  448 (525)
T ss_dssp             CEEEEEEEGGGTTCCTT------------------------CHHHHHHHHHHHHHHTSCCS-SCCEEEEEEECCB-TTSG
T ss_pred             CEEEEECCHHHcCCCCC------------------------CHHHHHHHHHHHHHHHHHHh-CCCCEEEEECCcc-cccc
Confidence            68999999876554332                        35899999999988766543 4999999999988 3322


Q ss_pred             CCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHh
Q 035985          160 TPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKR  238 (293)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~  238 (293)
                      ...  ...   ...+...               ....+..+++++++..++..+..  ...+  ..+.|..+...+...
T Consensus       449 ~~~--~~~---~~~~~~~---------------g~~~l~pee~a~~l~~~l~~~~~--~v~v--~~~dw~~~~~~~~~~  503 (525)
T 3qp9_A          449 VTE--GAT---GERLRRL---------------GLRPLAPATALTALDTALGHGDT--AVTI--ADVDWSSFAPGFTTA  503 (525)
T ss_dssp             GGS--SHH---HHHHHHT---------------TBCCBCHHHHHHHHHHHHHHTCS--EEEE--CCBCHHHHHHHHHSS
T ss_pred             ccc--hhh---HHHHHhc---------------CCCCCCHHHHHHHHHHHHhCCCC--eEEE--EeCCHHHHHhhcccc
Confidence            100  111   1111100               13346799999999999986532  2222  245677776665543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=98.69  E-value=6.6e-08  Score=80.21  Aligned_cols=161  Identities=15%  Similarity=0.050  Sum_probs=98.1

Q ss_pred             Ccchhhhhc-------CCCEEEEecccCC---CC-----CCCccccchhHHHHHHHHHHHHHhcCC-CccEEEEecccch
Q 035985           27 EASFDAPIS-------RSDIVFHVATPVN---FS-----SDDPETDMIKPAIQGVVNVLKACTKTK-TVKRVILTSSAAA   90 (293)
Q Consensus        27 ~~~~~~~~~-------~~d~Vih~a~~~~---~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~   90 (293)
                      ++++.++++       ++|++||+||...   ..     ..+. ...++.|+.++..+++++...= +-.+||++||...
T Consensus       104 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  182 (315)
T 2o2s_A          104 GYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGY-LAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAA  182 (315)
T ss_dssp             CCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHH-HHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGG
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHH-HHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecccc
Confidence            556666553       6899999998642   11     1112 2678899999999999987541 0258999999764


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh----CCceEEEEccCCccCCCCCC----C
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE----NNIDLITVIPSLMSGPSLTP----D  162 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~----~  162 (293)
                      ..+.+                       .....|+.+|...+.+.+.++.+    .|+++..++|+.|..+....    .
T Consensus       183 ~~~~~-----------------------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~  239 (315)
T 2o2s_A          183 ERVVP-----------------------GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSG  239 (315)
T ss_dssp             TSCCT-----------------------TCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSS
T ss_pred             cccCC-----------------------CccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccc
Confidence            32211                       01137999999999999887654    58999999999886541100    0


Q ss_pred             CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcE-EEecc
Q 035985          163 IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRY-ICCAV  224 (293)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y-~~~~~  224 (293)
                      .......+...+...   .+          ..-+...+|+|++++.++....  ..|.+ .++|.
T Consensus       240 ~~~~~~~~~~~~~~~---~p----------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  291 (315)
T 2o2s_A          240 EKSFIDYAIDYSYNN---AP----------LRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG  291 (315)
T ss_dssp             SSCHHHHHHHHHHHH---SS----------SCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cchhHHHHHHHHhcc---CC----------CCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCC
Confidence            000111111111000   00          1124679999999999887532  34544 56543

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=98.65  E-value=1.8e-08  Score=83.80  Aligned_cols=163  Identities=12%  Similarity=0.040  Sum_probs=84.3

Q ss_pred             Ccchhhhhc-------CCCEEEEecccCC--C-C-----CCCccccchhHHHHHHHHHHHHHhcCC-CccEEEEecccch
Q 035985           27 EASFDAPIS-------RSDIVFHVATPVN--F-S-----SDDPETDMIKPAIQGVVNVLKACTKTK-TVKRVILTSSAAA   90 (293)
Q Consensus        27 ~~~~~~~~~-------~~d~Vih~a~~~~--~-~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~   90 (293)
                      ++++.++++       ++|++||+||...  . .     ..+. +..+++|+.++..+++++...= +-.+||++||...
T Consensus       117 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  195 (319)
T 2ptg_A          117 GFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGY-LAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIAS  195 (319)
T ss_dssp             CCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHH-HHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC-
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHH-HHHHhHhhHHHHHHHHHHHHHHhcCceEEEEecccc
Confidence            345665543       6899999998542  1 1     0112 2678899999999999987641 0258999999764


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCC-chhHHHHHHHHHHHHHHHHh----CCceEEEEccCCccCCCCCCCCCc
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPT-WGYAASKTLAERAACKFAQE----NNIDLITVIPSLMSGPSLTPDIPS  165 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~-~~Y~~~K~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~~~~~~~~~  165 (293)
                      ..+.+                        .. ..|+.+|...+.+.+.++.+    .|+++.+|+|+.|..+........
T Consensus       196 ~~~~~------------------------~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~  251 (319)
T 2ptg_A          196 EKVIP------------------------GYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKA  251 (319)
T ss_dssp             -----------------------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC----------
T ss_pred             ccccC------------------------ccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccc
Confidence            32211                        11 37999999999998887654    489999999999876532110000


Q ss_pred             cHHHHHHHHhCC-cccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCc-EEEecc
Q 035985          166 SVALAATLITGN-DFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGR-YICCAV  224 (293)
Q Consensus       166 ~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~-y~~~~~  224 (293)
                      ....+....... ....+          ..-+...+|+|++++.++....  ..|. +.++|.
T Consensus       252 ~~~~~~~~~~~~~~~~~p----------~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  304 (319)
T 2ptg_A          252 GDKTFIDLAIDYSEANAP----------LQKELESDDVGRAALFLLSPLARAVTGATLYVDNG  304 (319)
T ss_dssp             -------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cchhhHHHHHHHHhccCC----------CCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            000000000000 00000          1225679999999999887532  3454 466543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=98.58  E-value=3.6e-07  Score=76.19  Aligned_cols=117  Identities=12%  Similarity=0.133  Sum_probs=84.1

Q ss_pred             CeEEEecCCCCC--c------------------chhhhhc-------CCCEEEEecccCC--C-C-----CCCccccchh
Q 035985           16 ELKIFRADLTDE--A------------------SFDAPIS-------RSDIVFHVATPVN--F-S-----SDDPETDMIK   60 (293)
Q Consensus        16 ~v~~v~~Dl~d~--~------------------~~~~~~~-------~~d~Vih~a~~~~--~-~-----~~~~~~~~~~   60 (293)
                      .+.++.+|+++.  +                  ++.++++       .+|++||+||...  . .     ..+. +..++
T Consensus        66 ~~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~-~~~~~  144 (329)
T 3lt0_A           66 ILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGY-LDALS  144 (329)
T ss_dssp             EEEEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHH-HHHHH
T ss_pred             ccccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHH-HHHHH
Confidence            478888898887  6                  6666553       5899999998631  1 1     1112 26889


Q ss_pred             HHHHHHHHHHHHHhcCC-CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCc-hhHHHHHHHHHHHHHH
Q 035985           61 PAIQGVVNVLKACTKTK-TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTW-GYAASKTLAERAACKF  138 (293)
Q Consensus        61 ~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~-~Y~~~K~~~E~~~~~~  138 (293)
                      +|+.++..+++++...= .-.++|++||.....+.+                        ... .|+.+|...+.+.+.+
T Consensus       145 vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~------------------------~~~~~Y~asKaal~~~~~~l  200 (329)
T 3lt0_A          145 KSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVP------------------------GYGGGMSSAKAALESDTRVL  200 (329)
T ss_dssp             HHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT------------------------TCTTTHHHHHHHHHHHHHHH
T ss_pred             HHhHHHHHHHHHHHHHHhhCCeEEEEeCccccCCCC------------------------cchHHHHHHHHHHHHHHHHH
Confidence            99999999999886541 015899999976432211                        122 7999999999988877


Q ss_pred             HHh----CCceEEEEccCCccCC
Q 035985          139 AQE----NNIDLITVIPSLMSGP  157 (293)
Q Consensus       139 ~~~----~~~~~~ilR~~~v~G~  157 (293)
                      +.+    .|+++..+.|+.|-.+
T Consensus       201 a~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          201 AYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             HHHHHHHHCCEEEEEEECCCCCH
T ss_pred             HHHhCCccCeEEEEEecceeech
Confidence            654    4899999999988654

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=98.49  E-value=1.9e-07  Score=84.35  Aligned_cols=108  Identities=24%  Similarity=0.189  Sum_probs=79.9

Q ss_pred             ecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHH----hcCCCccEEE
Q 035985           21 RADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKAC----TKTKTVKRVI   83 (293)
Q Consensus        21 ~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v   83 (293)
                      .+|++|.+++.++++       .+|++||+||......      .+.. ..+++|+.++.++++++    ++.+ ..+||
T Consensus        80 ~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~-~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV  157 (613)
T 3oml_A           80 VADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWN-LVNDVHLKGSFKCTQAAFPYMKKQN-YGRII  157 (613)
T ss_dssp             EECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTT-CEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence            479999988877765       5899999999764221      1122 67889999999999888    4555 57999


Q ss_pred             EecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           84 LTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        84 ~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      ++||....++..                        ....|+.+|...+.+.+.++.+.   |+.+..+.|+.+
T Consensus       158 ~isS~a~~~~~~------------------------~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~  207 (613)
T 3oml_A          158 MTSSNSGIYGNF------------------------GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA  207 (613)
T ss_dssp             EECCHHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred             EECCHHHcCCCC------------------------CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence            999987555332                        23589999999999999887664   899999999753

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.40  E-value=2.3e-07  Score=86.11  Aligned_cols=114  Identities=17%  Similarity=0.232  Sum_probs=88.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcCCCccEE
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKTKTVKRV   82 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~   82 (293)
                      .++.++.+|++|.+++.++++      .+|+|||+|+......      ++. +..++.|+.|+.++.+++. .. . +|
T Consensus       584 ~~v~~~~~Dvsd~~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~-~~~~~~nv~G~~~l~~~~~-~~-l-~i  659 (795)
T 3slk_A          584 AEVSLQACDVADRETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERL-DQVLRPKVDGARNLLELID-PD-V-AL  659 (795)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHH-HHHHCCCCCHHHHHHHHSC-TT-S-EE
T ss_pred             CcEEEEEeecCCHHHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHH-HHHHHHHHHHHHHHHHHHh-hC-C-EE
Confidence            468899999999999988875      3699999999864321      112 2678889999999999883 23 4 89


Q ss_pred             EEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCC
Q 035985           83 ILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGP  157 (293)
Q Consensus        83 v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~  157 (293)
                      |++||.....+.+.                        ...|+.+|...+.+.+++... |++++.+-|+.+-..
T Consensus       660 V~~SS~ag~~g~~g------------------------~~~YaAaka~~~alA~~~~~~-Gi~v~sI~pG~v~t~  709 (795)
T 3slk_A          660 VLFSSVSGVLGSGG------------------------QGNYAAANSFLDALAQQRQSR-GLPTRSLAWGPWAEH  709 (795)
T ss_dssp             EEEEETHHHHTCSS------------------------CHHHHHHHHHHHHHHHHHHHT-TCCEEEEEECCCSCC
T ss_pred             EEEccHHhcCCCCC------------------------CHHHHHHHHHHHHHHHHHHHc-CCeEEEEECCeECcc
Confidence            99999876655432                        248999999888888777655 999999999987644

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.34  E-value=2e-06  Score=84.95  Aligned_cols=154  Identities=12%  Similarity=0.061  Sum_probs=101.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------------CCCEEEEecccCCCC--CC-Cc-----cccchhHHHHHHHHHHHHH
Q 035985           15 GELKIFRADLTDEASFDAPIS-------------RSDIVFHVATPVNFS--SD-DP-----ETDMIKPAIQGVVNVLKAC   73 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------------~~d~Vih~a~~~~~~--~~-~~-----~~~~~~~n~~~~~~l~~~~   73 (293)
                      .++.++.+|++|.+++.++++             .+|++||+||.....  .. ..     .+..+.+|+.++..+++++
T Consensus       730 ~~v~~v~~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~  809 (1887)
T 2uv8_A          730 STLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQ  809 (1887)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CeEEEEEecCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence            468899999999998877653             489999999975422  11 11     1267889999999999887


Q ss_pred             hcCCC-----ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHH-HHHHHHhCC--ce
Q 035985           74 TKTKT-----VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERA-ACKFAQENN--ID  145 (293)
Q Consensus        74 ~~~~~-----~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~-~~~~~~~~~--~~  145 (293)
                      +....     -.+||++||.....+                          ....|+.+|...+.+ .+.++.+.+  ++
T Consensus       810 ~~lp~m~~~~~G~IVnISS~ag~~g--------------------------g~~aYaASKAAL~~Lttr~lA~ela~~Ir  863 (1887)
T 2uv8_A          810 KSARGIETRPAQVILPMSPNHGTFG--------------------------GDGMYSESKLSLETLFNRWHSESWANQLT  863 (1887)
T ss_dssp             HHTTTCCSCCEEEEEEECSCTTCSS--------------------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEE
T ss_pred             HhhhhhhhCCCCEEEEEcChHhccC--------------------------CCchHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence            43221     258999999764322                          123799999999998 565555443  89


Q ss_pred             EEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          146 LITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       146 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      ++.+.|+++-+....... ....   ..+...               ..-+...+|+|.+++.++...
T Consensus       864 VNaV~PG~V~tT~m~~~~-~~~~---~~~~~~---------------plr~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          864 VCGAIIGWTRGTGLMSAN-NIIA---EGIEKM---------------GVRTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             EEEEEECCEECC-----C-CTTH---HHHHTT---------------SCCCEEHHHHHHHHHGGGSHH
T ss_pred             EEEEEecccccccccccc-hhHH---HHHHhc---------------CCCCCCHHHHHHHHHHHhCCC
Confidence            999999999753221100 0111   111110               112347999999999988764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.03  E-value=1.5e-06  Score=83.55  Aligned_cols=117  Identities=12%  Similarity=0.074  Sum_probs=82.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------------CCCEEEEecccCCCC--CC-Cc-----cccchhHHHHHHHHHHHHH
Q 035985           15 GELKIFRADLTDEASFDAPIS-------------RSDIVFHVATPVNFS--SD-DP-----ETDMIKPAIQGVVNVLKAC   73 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------------~~d~Vih~a~~~~~~--~~-~~-----~~~~~~~n~~~~~~l~~~~   73 (293)
                      .++.++.+|++|.+++.++++             .+|++||+||.....  .. ..     ....+++|+.++..+++++
T Consensus       531 a~V~vV~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa  610 (1688)
T 2pff_A          531 STLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQ  610 (1688)
T ss_dssp             CEEEEEECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            358899999999998887753             489999999975322  11 11     1267889999999998887


Q ss_pred             hcC-----CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHH-HHHHHHhC--Cce
Q 035985           74 TKT-----KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERA-ACKFAQEN--NID  145 (293)
Q Consensus        74 ~~~-----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~-~~~~~~~~--~~~  145 (293)
                      +..     .+-.+||++||.....+                          ....|+.+|...+.+ .+.++++.  .++
T Consensus       611 ~~lp~M~krggGrIVnISSiAG~~G--------------------------g~saYaASKAAL~aLttrsLAeEla~~IR  664 (1688)
T 2pff_A          611 KSARGIETRPAQVILPMSPNHGTFG--------------------------GDGMYSESKLSLETLFNRWHSESWANQLT  664 (1688)
T ss_dssp             HHHHTCTTSCEEECCCCCSCTTTSS--------------------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEE
T ss_pred             HhChHHHhCCCCEEEEEEChHhccC--------------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeE
Confidence            321     11258999999764322                          124799999999998 44444433  288


Q ss_pred             EEEEccCCccCC
Q 035985          146 LITVIPSLMSGP  157 (293)
Q Consensus       146 ~~ilR~~~v~G~  157 (293)
                      ++.+.|+.+-|.
T Consensus       665 VNaVaPG~V~TT  676 (1688)
T 2pff_A          665 VCGAIIGWTRGT  676 (1688)
T ss_dssp             CCCCCCCCCCCC
T ss_pred             EEEEEECcCcCC
Confidence            889999988753

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.00  E-value=1.3e-05  Score=67.62  Aligned_cols=121  Identities=7%  Similarity=-0.093  Sum_probs=78.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCC--------------CCC---------------------C
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVN--------------FSS---------------------D   52 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~--------------~~~---------------------~   52 (293)
                      ..+..+.+|++|++++.++++       ++|++||.||...              ...                     .
T Consensus       109 ~~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~  188 (405)
T 3zu3_A          109 LYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQ  188 (405)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEEC
T ss_pred             CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCC
Confidence            367889999999988777654       5899999998641              000                     0


Q ss_pred             -Ccc---ccchhHHHHHHH-HHHHHHhcCC---CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchh
Q 035985           53 -DPE---TDMIKPAIQGVV-NVLKACTKTK---TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGY  124 (293)
Q Consensus        53 -~~~---~~~~~~n~~~~~-~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y  124 (293)
                       ...   +.++++|..+.. .+++++....   .-.++|.+||.....+.+.                      .....|
T Consensus       189 ~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~----------------------~~~~aY  246 (405)
T 3zu3_A          189 PATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDI----------------------YWNGSI  246 (405)
T ss_dssp             CCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTT----------------------TTTSHH
T ss_pred             CCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCC----------------------ccchHH
Confidence             011   134555655544 4444433211   0258999999763322110                      112589


Q ss_pred             HHHHHHHHHHHHHHHHh---C-CceEEEEccCCccCC
Q 035985          125 AASKTLAERAACKFAQE---N-NIDLITVIPSLMSGP  157 (293)
Q Consensus       125 ~~~K~~~E~~~~~~~~~---~-~~~~~ilR~~~v~G~  157 (293)
                      +.+|...+.+.+.++.+   . |+++.++-|+.|-.+
T Consensus       247 ~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~  283 (405)
T 3zu3_A          247 GAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ  283 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence            99999999999988765   4 899999999988654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.00  E-value=4.8e-06  Score=82.17  Aligned_cols=153  Identities=12%  Similarity=0.079  Sum_probs=100.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-----------CCCEEEEecccCCCC---CCCc-----cccchhHHHHHHHHHHHHHhc
Q 035985           15 GELKIFRADLTDEASFDAPIS-----------RSDIVFHVATPVNFS---SDDP-----ETDMIKPAIQGVVNVLKACTK   75 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-----------~~d~Vih~a~~~~~~---~~~~-----~~~~~~~n~~~~~~l~~~~~~   75 (293)
                      .++.++.+|++|.+++.++++           .+|+|||+||.....   ....     ....+.+|+.++.+++++++.
T Consensus       707 ~~v~~v~~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~  786 (1878)
T 2uv9_A          707 SQLVVVPFNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKK  786 (1878)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEcCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            468899999999998887653           489999999975432   1111     126788999999988876321


Q ss_pred             ------CCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-C--CceE
Q 035985           76 ------TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-N--NIDL  146 (293)
Q Consensus        76 ------~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-~--~~~~  146 (293)
                            .+ ..+||++||.....+                          ....|+.+|...+.+++.+..+ .  ++++
T Consensus       787 lp~M~~~~-~G~IVnISS~ag~~g--------------------------g~~aYaASKAAL~aLt~~laAeEla~~IrV  839 (1878)
T 2uv9_A          787 ERGYETRP-AQVILPLSPNHGTFG--------------------------NDGLYSESKLALETLFNRWYSESWGNYLTI  839 (1878)
T ss_dssp             HHTCCSCC-EEECCEECSCSSSSS--------------------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEE
T ss_pred             hHHHHhCC-CCEEEEEcchhhccC--------------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEE
Confidence                  12 368999999764322                          1237999999999987765443 2  3899


Q ss_pred             EEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          147 ITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       147 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      +.+.|+.+-|.....   . .......+...               ..-+...+|+|++++.++...
T Consensus       840 NaVaPG~V~gT~m~~---~-~~~~~~~~~~~---------------plr~~sPeEVA~avlfLaSd~  887 (1878)
T 2uv9_A          840 CGAVIGWTRGTGLMS---A-NNLVAEGVEKL---------------GVRTFSQQEMAFNLLGLMAPA  887 (1878)
T ss_dssp             EEEEECCBCCTTSCS---H-HHHTHHHHHTT---------------TCCCBCHHHHHHHHHHHHSHH
T ss_pred             EEEEecceecCcccc---c-chhhHHHHHhc---------------CCCCCCHHHHHHHHHHHhCCc
Confidence            999999886332111   1 01111111110               112237899999999888654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.87  E-value=2.4e-05  Score=70.42  Aligned_cols=105  Identities=26%  Similarity=0.223  Sum_probs=76.2

Q ss_pred             cCCCCCcchhhhh-------cCCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCCCccEEEE
Q 035985           22 ADLTDEASFDAPI-------SRSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTKTVKRVIL   84 (293)
Q Consensus        22 ~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~   84 (293)
                      .|+.|.+++++++       ..+|++||+||.....      .++. +..+++|+.++..+.+++.    +.+ -.++|+
T Consensus        70 ~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~-~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVn  147 (604)
T 2et6_A           70 ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDY-KLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVN  147 (604)
T ss_dssp             EECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEE
T ss_pred             EEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEE
Confidence            5777776555443       3699999999975321      1112 2688899999988887764    333 469999


Q ss_pred             ecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccC
Q 035985           85 TSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPS  152 (293)
Q Consensus        85 ~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~  152 (293)
                      +||.....+.+                        ....|+.+|.....+.+.++.+   +|+++..|.|+
T Consensus       148 isS~ag~~~~~------------------------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg  194 (604)
T 2et6_A          148 TSSPAGLYGNF------------------------GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL  194 (604)
T ss_dssp             ECCHHHHHCCT------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             ECCHHHcCCCC------------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence            99987554322                        1248999999999999988765   38999999995

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=97.85  E-value=3.8e-05  Score=65.64  Aligned_cols=121  Identities=11%  Similarity=-0.086  Sum_probs=75.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccC-------------CC-CCC---------------------
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPV-------------NF-SSD---------------------   52 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~-------------~~-~~~---------------------   52 (293)
                      ..+..+.+|++|++++.++++       ++|++||.||..             .. ...                     
T Consensus       123 ~~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~  202 (418)
T 4eue_A          123 LVAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVS  202 (418)
T ss_dssp             CCEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEEC
T ss_pred             CcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCccccccccccccccccccccccccccccccccccccccccccc
Confidence            368899999999988777653       589999999863             00 000                     


Q ss_pred             --Ccc--ccchhHHHHHHH-HHHHHHhcCC---CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchh
Q 035985           53 --DPE--TDMIKPAIQGVV-NVLKACTKTK---TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGY  124 (293)
Q Consensus        53 --~~~--~~~~~~n~~~~~-~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y  124 (293)
                        ...  ...++.|..+.. .+++++....   +-.++|.+||.....+.+                      ......|
T Consensus       203 ~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p----------------------~~~~~aY  260 (418)
T 4eue_A          203 SASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYK----------------------IYREGTI  260 (418)
T ss_dssp             BCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTT----------------------TTTTSHH
T ss_pred             CCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCC----------------------ccccHHH
Confidence              000  022333333232 3444443222   024789998875322111                      1112589


Q ss_pred             HHHHHHHHHHHHHHHHh----CCceEEEEccCCccCC
Q 035985          125 AASKTLAERAACKFAQE----NNIDLITVIPSLMSGP  157 (293)
Q Consensus       125 ~~~K~~~E~~~~~~~~~----~~~~~~ilR~~~v~G~  157 (293)
                      +.+|...+.+.+.++.+    .|+++.++.|+.|-.+
T Consensus       261 ~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          261 GIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            99999999998887654    4799999999988654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.80  E-value=1.9e-05  Score=71.03  Aligned_cols=111  Identities=20%  Similarity=0.167  Sum_probs=78.8

Q ss_pred             CeEEEecCC-CCCcch-hhh---hcCCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCCCcc
Q 035985           16 ELKIFRADL-TDEASF-DAP---ISRSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTKTVK   80 (293)
Q Consensus        16 ~v~~v~~Dl-~d~~~~-~~~---~~~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~   80 (293)
                      ++..+.+|+ .+.+.+ +++   +..+|++||+||.....      .++. +..+++|+.++..+.+++.    +.+ -.
T Consensus       370 ~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~-~~~~~vNl~g~~~~~~~~~p~m~~~~-~G  447 (604)
T 2et6_A          370 EAWPDQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEW-DSVQQVHLIGTFNLSRLAWPYFVEKQ-FG  447 (604)
T ss_dssp             EEEEECCCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHTT-CE
T ss_pred             eEEEEEcChHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHhHHHHHHHHHHHHHHHHcC-CC
Confidence            466777888 554432 222   34799999999975321      1112 2688899999988887764    333 46


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPS  152 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~  152 (293)
                      ++|++||.....+.+                        ....|+.+|.....+.+.++.+   +|+++..|.|+
T Consensus       448 ~IVnisS~ag~~~~~------------------------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG  498 (604)
T 2et6_A          448 RIINITSTSGIYGNF------------------------GQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH  498 (604)
T ss_dssp             EEEEECCHHHHSCCT------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             EEEEECChhhccCCC------------------------CChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC
Confidence            999999986544322                        2248999999999999888765   38999999997

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.80  E-value=2.5e-05  Score=66.39  Aligned_cols=122  Identities=11%  Similarity=-0.062  Sum_probs=77.3

Q ss_pred             CCeEEEecCCCCCcchhhhh--------cCCCEEEEecccC-------------CC-CC---------------------
Q 035985           15 GELKIFRADLTDEASFDAPI--------SRSDIVFHVATPV-------------NF-SS---------------------   51 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~--------~~~d~Vih~a~~~-------------~~-~~---------------------   51 (293)
                      ..+..+.+|++|++++.+++        .++|++||.||..             .. ..                     
T Consensus       123 ~~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~  202 (422)
T 3s8m_A          123 LYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASI  202 (422)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEE
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCcccccccccccccccccccccccccccccccccccccccccc
Confidence            36788999999998776654        4589999999862             10 00                     


Q ss_pred             -CCcc---ccchhHHHHHHH-HHHHHHhcCC---CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCch
Q 035985           52 -DDPE---TDMIKPAIQGVV-NVLKACTKTK---TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWG  123 (293)
Q Consensus        52 -~~~~---~~~~~~n~~~~~-~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~  123 (293)
                       ....   ...++.|..+.. .+++++....   +-.++|.+||.....+.+.                      .....
T Consensus       203 ~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~----------------------~~~~a  260 (422)
T 3s8m_A          203 EPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPI----------------------YWHGA  260 (422)
T ss_dssp             CCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHH----------------------HTSHH
T ss_pred             CCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCC----------------------ccchH
Confidence             0011   123334433333 4455543221   0247999999763322110                      01147


Q ss_pred             hHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCC
Q 035985          124 YAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPS  158 (293)
Q Consensus       124 Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~  158 (293)
                      |+.+|...+.+.+.++.+.   |+++.++.|+.|-.+.
T Consensus       261 Y~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          261 LGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence            9999999999999887653   8999999999886653

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=97.75  E-value=4.4e-05  Score=78.96  Aligned_cols=116  Identities=16%  Similarity=0.147  Sum_probs=83.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecccCCC------CCCCccccchhHHHHHHHHHHHHHhcC-CCccE
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNF------SSDDPETDMIKPAIQGVVNVLKACTKT-KTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~   81 (293)
                      .++.++.+|++|.+++.++++      .+|+|||+||....      ..++.. ..++.|+.|+.++.+++... ....+
T Consensus      1937 ~~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~-~~~~~nv~g~~~l~~~~~~~~~~~g~ 2015 (2512)
T 2vz8_A         1937 VQVLVSTSNASSLDGARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQ-DVSKPKYSGTANLDRVTREACPELDY 2015 (2512)
T ss_dssp             CEEEEECCCSSSHHHHHHHHHHHHHHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTTCCE
T ss_pred             CEEEEEecCCCCHHHHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHH-HHHHHHHHHHHHHHHHHHHhcccCCE
Confidence            367889999999998877664      58999999997531      222334 78999999999998877543 11469


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSG  156 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G  156 (293)
                      ||++||.....+.+.                        ...|+.+|...+.+.+....+ |++.+.+-.+.+-+
T Consensus      2016 iV~iSS~ag~~g~~g------------------------~~~Y~aaKaal~~l~~~rr~~-Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2016 FVIFSSVSCGRGNAG------------------------QANYGFANSAMERICEKRRHD-GLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             EEEECCHHHHTTCTT------------------------CHHHHHHHHHHHHHHHHHHHT-TSCCCEEEECCBCT
T ss_pred             EEEecchhhcCCCCC------------------------cHHHHHHHHHHHHHHHHHHHC-CCcEEEEEccCcCC
Confidence            999999875543321                        248999999999999877665 89988888775533

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.67  E-value=1.2e-05  Score=66.87  Aligned_cols=122  Identities=14%  Similarity=0.064  Sum_probs=82.8

Q ss_pred             cCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCC-CccEEEEecccchhcccccCCCC
Q 035985           22 ADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTK-TVKRVILTSSAAAVSINAQNVTG  100 (293)
Q Consensus        22 ~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~  100 (293)
                      +|+....++.++++++|+|||+|+.......... +++..|+..++++++++.+.+ ...+||++|.-......-     
T Consensus        69 ~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~-dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~-----  142 (329)
T 1b8p_A           69 AGMTAHADPMTAFKDADVALLVGARPRGPGMERK-DLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYI-----  142 (329)
T ss_dssp             EEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHH-----
T ss_pred             CcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHH-----
Confidence            3555556678889999999999997654433444 788999999999999999883 345899988632111000     


Q ss_pred             ccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCC
Q 035985          101 LVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSL  159 (293)
Q Consensus       101 ~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~  159 (293)
                        +.+..+        ..++...++.+++...++...+++..|++...++..+|+|.+.
T Consensus       143 --~~~~~~--------~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg  191 (329)
T 1b8p_A          143 --AMKSAP--------SLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHS  191 (329)
T ss_dssp             --HHHTCT--------TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSS
T ss_pred             --HHHHcC--------CCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccC
Confidence              000000        0012235788888888888888887788777777767888553

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=96.85  E-value=0.0014  Score=53.97  Aligned_cols=111  Identities=13%  Similarity=0.027  Sum_probs=71.5

Q ss_pred             chhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccccCCCCccccCCCC
Q 035985           29 SFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNW  108 (293)
Q Consensus        29 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  108 (293)
                      ++.++++++|+|||+|+.......... +.+..|+.+++++++++++.+  +++|+++|-- +.....    ...+. . 
T Consensus        67 ~l~~al~gaD~Vi~~Ag~~~~~g~~r~-dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNP-v~~~t~----~~~k~-~-  136 (313)
T 1hye_A           67 ENLRIIDESDVVIITSGVPRKEGMSRM-DLAKTNAKIVGKYAKKIAEIC--DTKIFVITNP-VDVMTY----KALVD-S-  136 (313)
T ss_dssp             TCGGGGTTCSEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHC--CCEEEECSSS-HHHHHH----HHHHH-H-
T ss_pred             chHHHhCCCCEEEECCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHHhC--CeEEEEecCc-HHHHHH----HHHHh-h-
Confidence            367789999999999997654333334 789999999999999999987  4555555532 110000    00011 0 


Q ss_pred             CchhhhccCCCCCchhHH-HHHHHHHHHHHHHHhCCceEEEEccCCccCCC
Q 035985          109 TDVEFLSSEKPPTWGYAA-SKTLAERAACKFAQENNIDLITVIPSLMSGPS  158 (293)
Q Consensus       109 ~~~~~~~~~~~p~~~Y~~-~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~  158 (293)
                              ..++...+|. +.+...++...+++..|++..-++. .++|.+
T Consensus       137 --------~~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G~H  178 (313)
T 1hye_A          137 --------KFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIGEH  178 (313)
T ss_dssp             --------CCCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEECS
T ss_pred             --------CcChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEeecc
Confidence                    1234456777 7777777777777776776555554 566644

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=96.76  E-value=0.0019  Score=53.50  Aligned_cols=59  Identities=14%  Similarity=0.114  Sum_probs=46.6

Q ss_pred             cchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEeccc
Q 035985           28 ASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSA   88 (293)
Q Consensus        28 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~   88 (293)
                      .++.++++++|+|||+|+.......... ++...|+.+++++++++.+.+ .+.+|+++|-
T Consensus        68 ~d~~~al~gaDvVi~~ag~~~~~g~~r~-dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SN  126 (326)
T 1smk_A           68 QQLEAALTGMDLIIVPAGVPRKPGMTRD-DLFKINAGIVKTLCEGIAKCC-PRAIVNLISN  126 (326)
T ss_dssp             HHHHHHHTTCSEEEECCCCCCCSSCCCS-HHHHHHHHHHHHHHHHHHHHC-TTSEEEECCS
T ss_pred             CCHHHHcCCCCEEEEcCCcCCCCCCCHH-HHHHHHHHHHHHHHHHHHhhC-CCeEEEEECC
Confidence            3566788999999999997653333334 778999999999999999988 6777777764

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=96.65  E-value=0.0033  Score=51.44  Aligned_cols=110  Identities=11%  Similarity=0.067  Sum_probs=66.7

Q ss_pred             hhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccccCCCCccccCCCCCc
Q 035985           31 DAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTD  110 (293)
Q Consensus        31 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~  110 (293)
                      .++++++|+|||+|+.......... +.+..|+.+++++++++++.+ .+.+|+++|--+ .....    ......    
T Consensus        65 ~~a~~~aDvVi~~ag~~~~~g~~r~-dl~~~N~~i~~~i~~~i~~~~-p~~~viv~SNPv-~~~~~----~~~~~~----  133 (303)
T 1o6z_A           65 YEDTAGSDVVVITAGIPRQPGQTRI-DLAGDNAPIMEDIQSSLDEHN-DDYISLTTSNPV-DLLNR----HLYEAG----  133 (303)
T ss_dssp             GGGGTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHTTC-SCCEEEECCSSH-HHHHH----HHHHHS----
T ss_pred             HHHhCCCCEEEEcCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHC-CCcEEEEeCChH-HHHHH----HHHHHc----
Confidence            4568899999999997654333334 778999999999999999998 677777776431 10000    000000    


Q ss_pred             hhhhccCCCCCchhHH-HHHHHHHHHHHHHHhCCceEEEEccCCccCCC
Q 035985          111 VEFLSSEKPPTWGYAA-SKTLAERAACKFAQENNIDLITVIPSLMSGPS  158 (293)
Q Consensus       111 ~~~~~~~~~p~~~Y~~-~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~  158 (293)
                            ..++....|. +.+..-++-...++..|++..-++ ..++|.+
T Consensus       134 ------~~p~~rviG~gt~Ld~~r~~~~la~~l~v~~~~v~-~~v~G~H  175 (303)
T 1o6z_A          134 ------DRSREQVIGFGGRLDSARFRYVLSEEFDAPVQNVE-GTILGEH  175 (303)
T ss_dssp             ------SSCGGGEEECCHHHHHHHHHHHHHHHHTCCGGGEE-CCEEECS
T ss_pred             ------CCCHHHeeecccchhHHHHHHHHHHHhCcCHHHeE-EEEEeCC
Confidence                  1112234555 444455555555555566544444 5677754

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=96.29  E-value=0.0029  Score=43.50  Aligned_cols=55  Identities=20%  Similarity=0.112  Sum_probs=43.3

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSS   87 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS   87 (293)
                      .++.++.+|+.+.+.+.++++++|+|||+++..                 ....+++++.+.+ +++|.+.++
T Consensus        48 ~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~-----------------~~~~~~~~~~~~g-~~~~~~~~~  102 (118)
T 3ic5_A           48 MGVATKQVDAKDEAGLAKALGGFDAVISAAPFF-----------------LTPIIAKAAKAAG-AHYFDLTED  102 (118)
T ss_dssp             TTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG-----------------GHHHHHHHHHHTT-CEEECCCSC
T ss_pred             CCCcEEEecCCCHHHHHHHHcCCCEEEECCCch-----------------hhHHHHHHHHHhC-CCEEEecCc
Confidence            478899999999999999999999999998521                 1357888899988 766655444

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=96.04  E-value=0.072  Score=56.27  Aligned_cols=178  Identities=13%  Similarity=0.145  Sum_probs=102.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-----------CCCEEEEecccC----CC-------CCCCccccc----hhHHHHHHHH
Q 035985           15 GELKIFRADLTDEASFDAPIS-----------RSDIVFHVATPV----NF-------SSDDPETDM----IKPAIQGVVN   68 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-----------~~d~Vih~a~~~----~~-------~~~~~~~~~----~~~n~~~~~~   68 (293)
                      .++..+.+|++|.+++.++++           ++|++||+||..    ..       ...+.. ..    ++.|+.++..
T Consensus      2191 ~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~-~~~e~~~~vnl~~~~~ 2269 (3089)
T 3zen_D         2191 ATLWVVPANMASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVG-SRAEMEMKVLLWAVQR 2269 (3089)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTT-SHHHHHHHHHTHHHHH
T ss_pred             CeEEEEEecCCCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHH-HHHHHHHHHHHHHHHH
Confidence            357889999999988776632           489999999971    10       111121 23    6778888877


Q ss_pred             HHHHHhc----CC--CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-
Q 035985           69 VLKACTK----TK--TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-  141 (293)
Q Consensus        69 l~~~~~~----~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-  141 (293)
                      ++.++..    .+  ....+|..+|..  .+..                       .....|+.+|...+.+.+.++.+ 
T Consensus      2270 l~~~~~~~m~~~~~g~~~~ii~~~ss~--~g~~-----------------------g~~~aYsASKaAl~~LtrslA~E~ 2324 (3089)
T 3zen_D         2270 LISGLSKIGAERDIASRLHVVLPGSPN--RGMF-----------------------GGDGAYGEAKSALDALENRWSAEK 2324 (3089)
T ss_dssp             HHHHHHHHHHHTTCCCCEEEEEEECSS--TTSC-----------------------SSCSSHHHHGGGHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHcCCCceeEEEEECCcc--cccC-----------------------CCchHHHHHHHHHHHHHHHHHhcc
Confidence            7766543    22  011222222211  1000                       01237999999999999999888 


Q ss_pred             -C--CceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCC---
Q 035985          142 -N--NIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESA---  215 (293)
Q Consensus       142 -~--~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~---  215 (293)
                       .  ++.++.+.|+.|-+......... ..   .....    ..          .+ ....+|+|.+++.++.....   
T Consensus      2325 ~~a~~IrVn~v~PG~v~tT~l~~~~~~-~~---~~~~~----~~----------~r-~~~PeEIA~avlfLaS~~a~~~~ 2385 (3089)
T 3zen_D         2325 SWAERVSLAHALIGWTKGTGLMGQNDA-IV---SAVEE----AG----------VT-TYTTDEMAAMLLDLCTVETKVAA 2385 (3089)
T ss_dssp             TTTTTEEEEEEECCCEECSTTTTTTTT-TH---HHHGG----GS----------CB-CEEHHHHHHHHHHTTSHHHHHHH
T ss_pred             ccCCCeEEEEEeecccCCCcccccchh-HH---HHHHh----cC----------CC-CCCHHHHHHHHHHHhChhhhhHh
Confidence             3  58888999998875432211101 11   11111    00          11 12689999999998864321   


Q ss_pred             C--CcE-EEec-c---CCCHHHHHHHHHH
Q 035985          216 S--GRY-ICCA-V---NTSVPELAKFLNK  237 (293)
Q Consensus       216 ~--~~y-~~~~-~---~~t~~e~~~~i~~  237 (293)
                      .  .++ .++| -   ..++.++...+.+
T Consensus      2386 ~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D         2386 AGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp             HHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred             cCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence            1  133 3333 2   3688888876543

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=94.75  E-value=0.065  Score=44.28  Aligned_cols=58  Identities=14%  Similarity=0.121  Sum_probs=44.2

Q ss_pred             chhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCcc-EEEEecc
Q 035985           29 SFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVK-RVILTSS   87 (293)
Q Consensus        29 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS   87 (293)
                      ...+.++++|+|||+||.......... +.++.|+..++++++++.+.+.-. +++.+|-
T Consensus        72 ~~~~~~~daDvVvitAg~prkpG~tR~-dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           72 KEEIAFKDLDVAILVGSMPRRDGMERK-DLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             CHHHHTTTCSEEEECCSCCCCTTCCTT-TTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CcHHHhCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            445678899999999987654333444 789999999999999999987222 5777664

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=94.10  E-value=0.12  Score=42.30  Aligned_cols=58  Identities=14%  Similarity=0.145  Sum_probs=44.8

Q ss_pred             chhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecc
Q 035985           29 SFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSS   87 (293)
Q Consensus        29 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS   87 (293)
                      ++.++++++|+||++|+.......... +.+..|+...+.+++.+.+..+-.++|++|-
T Consensus        61 d~~~a~~~aDvVvi~ag~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           61 QLPDCLKGCDVVVIPAGVPRKPGMTRD-DLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             GHHHHHTTCSEEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CHHHHhCCCCEEEECCCcCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            466789999999999997654433444 7789999999999999988764457777653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=92.41  E-value=0.11  Score=43.66  Aligned_cols=53  Identities=13%  Similarity=0.090  Sum_probs=42.5

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      +.+..+..|++|.+++.++++++|+||+++++.       .          ...++++|.+.|  .+++=+|
T Consensus        56 ~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~-------~----------~~~v~~~~~~~g--~~yvD~s  108 (365)
T 3abi_A           56 EFATPLKVDASNFDKLVEVMKEFELVIGALPGF-------L----------GFKSIKAAIKSK--VDMVDVS  108 (365)
T ss_dssp             TTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG-------G----------HHHHHHHHHHHT--CEEEECC
T ss_pred             ccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc-------c----------cchHHHHHHhcC--cceEeee
Confidence            357788999999999999999999999998641       1          235888999988  5777665

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=91.70  E-value=0.3  Score=41.00  Aligned_cols=33  Identities=9%  Similarity=-0.034  Sum_probs=27.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPV   47 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~   47 (293)
                      .....+.+|+++++.++++++       ++|++||.++..
T Consensus       112 ~~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          112 LYSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             CCceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence            367889999999998877764       689999999865

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=90.16  E-value=0.52  Score=33.00  Aligned_cols=58  Identities=10%  Similarity=0.086  Sum_probs=39.8

Q ss_pred             CeEEEecCCCCCcchhhh-hcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccc
Q 035985           16 ELKIFRADLTDEASFDAP-ISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAA   89 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~-~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~   89 (293)
                      +...+.+|.++++.+.++ ++++|+||++++.      +     ...|    ..++..+++.+ ++++|..++..
T Consensus        49 ~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~------~-----~~~~----~~~~~~~~~~~-~~~ii~~~~~~  107 (144)
T 2hmt_A           49 ATHAVIANATEENELLSLGIRNFEYVIVAIGA------N-----IQAS----TLTTLLLKELD-IPNIWVKAQNY  107 (144)
T ss_dssp             CSEEEECCTTCHHHHHTTTGGGCSEEEECCCS------C-----HHHH----HHHHHHHHHTT-CSEEEEECCSH
T ss_pred             CCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC------c-----hHHH----HHHHHHHHHcC-CCeEEEEeCCH
Confidence            457788999988777776 7789999998863      1     1222    23566777777 67777666543

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=88.37  E-value=0.32  Score=41.41  Aligned_cols=52  Identities=27%  Similarity=0.417  Sum_probs=39.7

Q ss_pred             CeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           16 ELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      ++..+.+|++|.+++.+++++  +|+|||+++...                 ...++++|.+.+ + +++-++
T Consensus        54 ~~~~~~~D~~d~~~l~~~l~~~~~DvVin~ag~~~-----------------~~~v~~a~l~~g-~-~vvD~a  107 (405)
T 4ina_A           54 EIDITTVDADSIEELVALINEVKPQIVLNIALPYQ-----------------DLTIMEACLRTG-V-PYLDTA  107 (405)
T ss_dssp             CCEEEECCTTCHHHHHHHHHHHCCSEEEECSCGGG-----------------HHHHHHHHHHHT-C-CEEESS
T ss_pred             ceEEEEecCCCHHHHHHHHHhhCCCEEEECCCccc-----------------ChHHHHHHHHhC-C-CEEEec
Confidence            588999999999999999987  999999987411                 135777888877 4 455443

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=85.54  E-value=0.4  Score=41.41  Aligned_cols=63  Identities=13%  Similarity=0.233  Sum_probs=41.6

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCcc------ccchh--HHHHHHHHHHHHHhcCCCcc
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPE------TDMIK--PAIQGVVNVLKACTKTKTVK   80 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~------~~~~~--~n~~~~~~l~~~~~~~~~~~   80 (293)
                      ++..+.+|++|.+++.++++++|+|||+++...... ...      ..++.  .....+..++++|++.| ++
T Consensus        48 ~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~~-i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG-v~  118 (450)
T 1ff9_A           48 HSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHAT-VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG-IT  118 (450)
T ss_dssp             TEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHHH-HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT-CE
T ss_pred             CceEEEeecCCHHHHHHHHcCCcEEEECCccccchH-HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC-Ce
Confidence            578899999999999999999999999998632110 000      01110  01235678899999988 53

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=83.65  E-value=2.4  Score=34.72  Aligned_cols=54  Identities=7%  Similarity=0.094  Sum_probs=39.8

Q ss_pred             hhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           32 APISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        32 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      +.++++|+||.+||........-. +.+..|+...+.+++.+.+..+-..++.+|
T Consensus        69 ~a~~~aDvVvi~ag~p~kpG~~R~-dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           69 EDCKDADIVCICAGANQKPGETRL-ELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             GGGTTCSEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             HHhCCCCEEEEecccCCCCCccHH-HHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence            467899999999987543333333 678899999999999998887444555555

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=83.09  E-value=2.7  Score=33.85  Aligned_cols=54  Identities=9%  Similarity=0.124  Sum_probs=41.8

Q ss_pred             hhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           32 APISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        32 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      +.++++|+||-+||....+...-. +.+..|..-.+.+.+.+.+..+-..++.+|
T Consensus        65 ~~~~~aDvVvitAG~prkpGmtR~-dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           65 SLLKGSEIIVVTAGLARKPGMTRL-DLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             GGGTTCSEEEECCCCCCCSSSCHH-HHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             HHhCCCCEEEEecCCCCCCCCchH-HHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            357799999999998765444555 889999999999999999987434455554

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=82.97  E-value=1.1  Score=37.15  Aligned_cols=58  Identities=10%  Similarity=0.065  Sum_probs=39.0

Q ss_pred             cchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCcc-EEEEec
Q 035985           28 ASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVK-RVILTS   86 (293)
Q Consensus        28 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S   86 (293)
                      .+..++++++|+||.+||........-. +.+..|+...+.+++.+.+..+-. .++.+|
T Consensus        68 ~d~~~al~dADvVvitaG~p~kpG~~R~-dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           68 SDIKEALTDAKYIVSSGGAPRKEGMTRE-DLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             SCHHHHHTTEEEEEECCC-------CHH-HHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             CCHHHHhCCCCEEEEccCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            3456778899999999997543323333 678899999999999998886333 255555

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=82.73  E-value=3  Score=33.60  Aligned_cols=56  Identities=9%  Similarity=0.109  Sum_probs=41.8

Q ss_pred             hhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecc
Q 035985           31 DAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSS   87 (293)
Q Consensus        31 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS   87 (293)
                      .++++++|+||.+|+........-. +.+..|..-.+.+++.+.+.++-..++.+|-
T Consensus        64 ~~a~~~aDiVViaag~~~kpG~~R~-dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           64 YSLLKGSEIIVVTAGLARKPGMTRL-DLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             GGGGTTCSEEEECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             HHHhCCCCEEEECCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            4678899999999987643333334 7788899999999999998874456666553

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=81.85  E-value=1.8  Score=35.43  Aligned_cols=55  Identities=7%  Similarity=0.116  Sum_probs=30.6

Q ss_pred             hhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           31 DAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        31 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      .+.++++|+||++||........-. +.+..|+.-.+.+++.+.+..+-..++.+|
T Consensus        71 ~~a~~~aDiVvi~ag~~~kpG~tR~-dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           71 YSDAKDADLVVITAGAPQKPGETRL-DLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             GGGGTTCSEEEECCCCC-----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             HHHhcCCCEEEECCCCCCCCCchHH-HHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            3567899999999997543323333 778899999999999999887444555554

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=81.72  E-value=0.64  Score=38.47  Aligned_cols=117  Identities=11%  Similarity=0.094  Sum_probs=70.3

Q ss_pred             hhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCC-CccEEEEecccchhcccccCCCCccccCCCC
Q 035985           30 FDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTK-TVKRVILTSSAAAVSINAQNVTGLVMDEKNW  108 (293)
Q Consensus        30 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  108 (293)
                      ..++++++|+||-+||........-. +.++.|..-.+.+.+.+.+.. +-.+++.+|--.-....      ..+.... 
T Consensus        94 ~~~a~~~advVvi~aG~prkpGmtR~-DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~------i~~~~~~-  165 (345)
T 4h7p_A           94 PRVAFDGVAIAIMCGAFPRKAGMERK-DLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNAL------ILLKSAQ-  165 (345)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH------HHHHHTT-
T ss_pred             hHHHhCCCCEEEECCCCCCCCCCCHH-HHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHH------HHHHHcc-
Confidence            34567899999999998765444445 889999999999999987753 22345555532100000      0000000 


Q ss_pred             CchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCC
Q 035985          109 TDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTP  161 (293)
Q Consensus       109 ~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~  161 (293)
                             ..+.+...-+.+.+..-++-...++..+++..-++-..|+|.+...
T Consensus       166 -------g~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~t  211 (345)
T 4h7p_A          166 -------GKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSST  211 (345)
T ss_dssp             -------TCSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSSTT
T ss_pred             -------CCCCcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCCe
Confidence                   0122334455566666666666677667776666656677876554

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=80.50  E-value=3.2  Score=33.74  Aligned_cols=56  Identities=16%  Similarity=0.137  Sum_probs=42.1

Q ss_pred             hhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           30 FDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        30 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      ..+.++++|+||.+||........-. +.++.|....+.+.+.+.+..+-..++.+|
T Consensus        63 ~~~~~~~aDivii~ag~~rkpG~~R~-dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           63 ATPALEGADVVLISAGVARKPGMDRS-DLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             CHHHHTTCSEEEECCSCSCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             cHHHhCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            45678899999999997654433444 788999999999999998876334566655

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=80.39  E-value=3.4  Score=33.97  Aligned_cols=54  Identities=9%  Similarity=0.143  Sum_probs=41.3

Q ss_pred             hhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecc
Q 035985           33 PISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSS   87 (293)
Q Consensus        33 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS   87 (293)
                      .++++|+||.+||........-. +.+..|..-.+.+.+.+.+..+-..++.+|-
T Consensus        84 ~~~~aDiVvi~aG~~~kpG~tR~-dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           84 VTANSKLVIITAGARQQEGESRL-NLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             GGTTEEEEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             HhCCCCEEEEccCCCCCCCccHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            57899999999997654434444 8899999999999999988864446666553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	293
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-24
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-23
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-20
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	9e-20
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	3e-16
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-13
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	3e-12
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-11
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-11
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	4e-11
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.0 bits (246), Expect = 1e-24
 Identities = 39/279 (13%), Positives = 86/279 (30%), Gaps = 27/279 (9%)

Query: 17  LKIFRADLTDEASFDAPISRSDIVFHVATP--VNFSSDDPETDMIKPAIQGVVNVLKACT 74
           +     +L +    +      D ++H+A+P        +P    +K    G +N+L    
Sbjct: 46  IGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPI-KTLKTNTIGTLNMLGLAK 104

Query: 75  KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERA 134
           +     R++L S++        +       E  W  V  +     P   Y   K +AE  
Sbjct: 105 RVG--ARLLLASTSEVY----GDPEVHPQSEDYWGHVNPIG----PRACYDEGKRVAETM 154

Query: 135 ACKFAQENNIDLITVIPSLMSGPSLTPDIPSSV-ALAATLITGNDFLLNGLKGMQMLSGS 193
              + ++  +++         GP +  +    V       + G    + G  G Q     
Sbjct: 155 CYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYG-SGSQTR--- 210

Query: 194 ISISHVEDVCRAHIFLAEKESAS----GRYICCAVNTSVPELAKFLNKRFPEYKVPTDFG 249
            +  +V D+    + L     +S    G      +      +   +        +     
Sbjct: 211 -AFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQD 269

Query: 250 DFPSEAKLILSSEKLISE-GFCFKYGIEDIYDQTVEYLK 287
           D     K     +K     G+     +E+  ++ + Y +
Sbjct: 270 DPQ---KRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR 305

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 96.4 bits (238), Expect = 1e-23
 Identities = 69/300 (23%), Positives = 101/300 (33%), Gaps = 24/300 (8%)

Query: 1   NQKKISPLIALQELGEL-KIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMI 59
               +      +  G        D+  + ++D  I  +  V H       S  +   +++
Sbjct: 47  KLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH--IASVVSFSNKYDEVV 104

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLS---- 115
            PAI G +N L+A   T +VKR +LTSS  +  I   NV G+ +DEK+W           
Sbjct: 105 TPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL 164

Query: 116 ---SEKPPTWGYAASKTLAERAA--CKFAQENNIDLITVIPSLMSGPSLTP--DIPSSVA 168
                +   W YAASKT AE AA       + +  L  V+P+   G    P     S+  
Sbjct: 165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSG 224

Query: 169 LAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRY-ICCAVNTS 227
              +L  G       L   Q            D+   H+          R     A    
Sbjct: 225 WMMSLFNGEVSPALALMPPQY------YVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFD 278

Query: 228 VPELAKFLNKRFPEYKVPTDFGDFPSEAKLI---LSSEKLISEGFCFKYGIEDIYDQTVE 284
              +     K +P    P DF D   +        S E L S G      IE+     V 
Sbjct: 279 WNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVG 338

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 86.0 bits (212), Expect = 8e-20
 Identities = 57/307 (18%), Positives = 99/307 (32%), Gaps = 41/307 (13%)

Query: 8   LIALQELGELKIFRADLTDEASFDAPIS--RSDIVFHVA--TPVNFSSDDPETDMIKPAI 63
           L  + E        AD+ D A         + D V H+A  + V+ S   P    I+  I
Sbjct: 43  LSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPA-AFIETNI 101

Query: 64  QGVVNVLKACTKT--------KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLS 115
            G   +L+   K         K   R    S+                + +N   +   +
Sbjct: 102 VGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHP-----DEVENSVTLPLFT 156

Query: 116 SEKP--PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD--IPSSVALAA 171
                 P+  Y+ASK  ++     + +   +  I    S   GP   P+  IP    +  
Sbjct: 157 ETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIP---LVIL 213

Query: 172 TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRY-ICCAVNTSVPE 230
             + G    + G KG Q+        +VED  RA   +  +  A   Y I         +
Sbjct: 214 NALEGKPLPIYG-KGDQIR----DWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLD 268

Query: 231 LAKFLN-------KRFPEYKVPTDF-GDFPSEAK-LILSSEKLISE-GFCFKYGIEDIYD 280
           +   +         +   Y+    +  D P   +   + + K+  E G+      E    
Sbjct: 269 VVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIR 328

Query: 281 QTVEYLK 287
           +TVE+  
Sbjct: 329 KTVEWYL 335

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 85.3 bits (210), Expect = 9e-20
 Identities = 48/296 (16%), Positives = 85/296 (28%), Gaps = 33/296 (11%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETD-MI 59
                + L  +     L+    D+ D       +   D + H A   +            
Sbjct: 41  YAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFT 100

Query: 60  KPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKP 119
           +  +QG   +L+         RV+  S+         ++      E +  +         
Sbjct: 101 ETNVQGTQTLLQCAVDAGV-GRVVHVSTNQVY----GSIDSGSWTESSPLE--------- 146

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD--IPSSVALAATLITGN 177
           P   YAASK  ++  A  + +   +D+         GP   P+  IP        L+ G 
Sbjct: 147 PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIP---LFVTNLLDGG 203

Query: 178 DFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTS-----VPELA 232
              L G  G  +        H +D CR    +     A   Y                L 
Sbjct: 204 TLPLYG-DGANVR----EWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILL 258

Query: 233 KFLNKRFPEYKVPTDFGDFPSEAKLILSSEKLISE-GFCFKYGIEDIYDQTVEYLK 287
             L   +   +   D        +  L   K+  E G+  +    D   +TV + +
Sbjct: 259 DSLGADWSSVRKVADRKGHD--LRYSLDGGKIERELGYRPQVSFADGLARTVRWYR 312

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 75.3 bits (184), Expect = 3e-16
 Identities = 42/304 (13%), Positives = 95/304 (31%), Gaps = 38/304 (12%)

Query: 10  ALQELGELKIF-----RADLTDEASFDAPIS--RSDIVFHVATPV--NFSSDDPETDMIK 60
            L++ G++++        +L D  +     +  R D V+  A  V    +++    D I 
Sbjct: 21  QLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIY 80

Query: 61  PAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPP 120
             +    N++ A  +   V +++   S+      A+      M E          + +P 
Sbjct: 81  QNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQP----MAESELLQ----GTLEPT 131

Query: 121 TWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFL 180
              YA +K    +    + ++   D  +V+P+ + GP       +S  + A L   ++  
Sbjct: 132 NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEAT 191

Query: 181 LNGLK-------GMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPE--- 230
                       G  M                     E    + + +   +N        
Sbjct: 192 AQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCT 251

Query: 231 -------LAKFLNKRFPEYKVPTDFGDFPSEAKLILSSEKLISEGFCFKYGIEDIYDQTV 283
                  +AK +  +       +     P   + +L   +L   G+  +  +E     T 
Sbjct: 252 IRELAQTIAKVVGYKGRVVFDASKPDGTP---RKLLDVTRLHQLGWYHEISLEAGLASTY 308

Query: 284 EYLK 287
           ++  
Sbjct: 309 QWFL 312

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 67.9 bits (165), Expect = 1e-13
 Identities = 33/231 (14%), Positives = 66/231 (28%), Gaps = 26/231 (11%)

Query: 17  LKIFRADLTDEASFDAPIS--RSDIVFHVATP--VNFSSDDPETDMIKPAIQGVVNVLKA 72
             +   DL+D ++    +   + D V+++     V  S + PE         G + +L+A
Sbjct: 57  FHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPE-YTADVDAMGTLRLLEA 115

Query: 73  CTKT--KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTL 130
                 +   R    S++         V  +   E              P   YA +K  
Sbjct: 116 IRFLGLEKKTRFYQASTSELYG----LVQEIPQKETTPFY---------PRSPYAVAKLY 162

Query: 131 AERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSV--ALAATLITGNDFLLNGLKGMQ 188
           A      + +   +     I      P       +       A +  G +  L       
Sbjct: 163 AYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDS 222

Query: 189 MLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRF 239
           +        H +D  +    + ++E      I   V  SV +  +    + 
Sbjct: 223 L----RDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQL 269

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 63.8 bits (154), Expect = 3e-12
 Identities = 39/275 (14%), Positives = 79/275 (28%), Gaps = 15/275 (5%)

Query: 18  KIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAI-QGVVNVLKACTKT 76
           +    DL    +        D VF++A  +           +       +   +    + 
Sbjct: 61  EFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARI 120

Query: 77  KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAAC 136
             +KR    SSA       Q  T         +D         P   +   K   E    
Sbjct: 121 NGIKRFFYASSACIYPEFKQLET--TNVSLKESDAWPAE----PQDAFGLEKLATEELCK 174

Query: 137 KFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSI-- 194
            + ++  I+        + GP  T       A AA             +      G    
Sbjct: 175 HYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTS---TDRFEMWGDGLQTR 231

Query: 195 SISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPTDFGDFPSE 254
           S + +++     + L + +      I      S+ E+A+ +   F E K+P      P  
Sbjct: 232 SFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV-LSFEEKKLPIHHIPGPEG 290

Query: 255 AK-LILSSEKLISE-GFCFKYGIEDIYDQTVEYLK 287
            +     +  +  + G+     +++    T  ++K
Sbjct: 291 VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIK 325

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (147), Expect = 2e-11
 Identities = 42/313 (13%), Positives = 76/313 (24%), Gaps = 43/313 (13%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPISRSD---IVFHVATPVNFSSDDPETD 57
             + +         G +K+   DLTD       I+      I    A      S D    
Sbjct: 42  RIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEY 101

Query: 58  MIKPAIQGVVNVLKACTKTK--TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLS 115
                  G + +L A          +    S++         V  +   E          
Sbjct: 102 TADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYG----KVQEIPQKETTPFY----- 152

Query: 116 SEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLIT 175
               P   Y A+K  A      F +  N+  +  I      P    +  +     +  + 
Sbjct: 153 ----PRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRS--VA 206

Query: 176 GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSV------- 228
                      +  L       H +D   A   + + +      I      SV       
Sbjct: 207 KIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKS 266

Query: 229 -------------PELAKFLNKRFPEYKVPTDFGDF-PSEAK-LILSSEKLISE-GFCFK 272
                         E      K   +  V  D   + P+E   L     K   +  +  +
Sbjct: 267 FLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPR 326

Query: 273 YGIEDIYDQTVEY 285
              +++  + V  
Sbjct: 327 VAFDELVREMVHA 339

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 60.4 bits (145), Expect = 4e-11
 Identities = 39/278 (14%), Positives = 90/278 (32%), Gaps = 17/278 (6%)

Query: 17  LKIFRADLTDEASFDAPISRSDIVFHVATP--VNFSSDDPETDMIKPAIQGVVNVLKACT 74
           +++   D+ D    D   +++D + H A     + S +DP    I     G   +L+A  
Sbjct: 54  VELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPS-PFIHTNFIGTYTLLEAAR 112

Query: 75  KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERA 134
           K       +   S   V  +      L    +   +     +   P+  Y+++K  ++  
Sbjct: 113 KYDIRFHHV---STDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLI 169

Query: 135 ACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSI 194
              + +   +       S   GP    +      +   L      L    K +       
Sbjct: 170 VKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNV------R 223

Query: 195 SISHVEDVCRAHIFLAEKESASGRYICCAVNTSVP-ELAKFLNKRFPEYKVPTDFGDFPS 253
              H  D       +  K      Y+  A       E+ + + ++  + K   D     +
Sbjct: 224 DWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRA 283

Query: 254 --EAKLILSSEKLISE-GFCFKY-GIEDIYDQTVEYLK 287
             + +  + + KL  E G+  ++    +  ++T+++  
Sbjct: 284 GHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYT 321

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 60.5 bits (145), Expect = 4e-11
 Identities = 47/306 (15%), Positives = 94/306 (30%), Gaps = 21/306 (6%)

Query: 1   NQKKISPLIALQELGELKIFRADLTDEASFDAPIS--RSDIVFHVATP--VNFSSDDPET 56
            +     L  L  LG  +    D+ ++      I+    D  FH+A    +  S D+P  
Sbjct: 35  RKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPC- 93

Query: 57  DMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSS 116
              +  + G +N+L+A  +  +   +I +S+        Q             D      
Sbjct: 94  MDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYD 153

Query: 117 EKP---PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL 173
           E         Y  SK  A++    +A+   ++ +    S M G                 
Sbjct: 154 ESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWV--GWF 211

Query: 174 ITGNDFLLNGLKGMQMLSGSIS-----ISHVEDVCRAHIFLAEKESASGRYICCAVNT-- 226
                 + NG+     +SG+       +   + +      LA      G           
Sbjct: 212 CQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVN 271

Query: 227 --SVPELAKFLNKRFPEYKVPTDFGDFPSEAK-LILSSEKLISE-GFCFKYGIEDIYDQT 282
             S+ EL K L          T+     S+ +  +   +K+ +   +  K   +D   + 
Sbjct: 272 SLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKM 331

Query: 283 VEYLKT 288
            ++  +
Sbjct: 332 YDWTSS 337

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 36.7 bits (83), Expect = 0.002
 Identities = 35/204 (17%), Positives = 57/204 (27%), Gaps = 39/204 (19%)

Query: 120 PTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITG--N 177
           P   Y  SK +AER     A+   I  I +      G     DI      +  LI     
Sbjct: 171 PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILG 230

Query: 178 DFLLNGLKGMQMLSGSISIS-----------------------HVEDVCRAHIFLAEKES 214
             + +     ++     + +                       HV D+  AHI   +   
Sbjct: 231 RVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVE 290

Query: 215 ASGRYICCAV----------NTSVPELAKFLNKRFPEYKVPTDFGDFPSE--AKLILSSE 262
             G                   SV E+ +   K    + +P           A L+ +S+
Sbjct: 291 KLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTG-HPIPVRECGRREGDPAYLVAASD 349

Query: 263 KLISE-GFCFKYGIEDIYDQTVEY 285
           K     G+  KY   +   +T   
Sbjct: 350 KAREVLGWKPKYDTLEAIMETSWK 373

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	293
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.97
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.96
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.94
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.93
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.9
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.77
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.76
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.66
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.64
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.6
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.56
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.37
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.18
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.17
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.16
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.15
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.12
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.12
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.11
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.11
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.11
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.11
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.1
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.1
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.09
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.09
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.08
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.08
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.06
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.05
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.04
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.04
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.03
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.03
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.02
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.01
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.99
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	98.99
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.98
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.98
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.96
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.95
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	98.93
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	98.93
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	98.92
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	98.87
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	98.87
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	98.85
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	98.84
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	98.81
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	98.8
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	98.79
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	98.78
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	98.77
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.77
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	98.73
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	98.72
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	98.69
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.69
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	98.67
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	98.6
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	98.54
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.53
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.5
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	98.29
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	98.27
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	98.23
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.11
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	97.99
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.91
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	97.81
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.77
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.73
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.73
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	97.61
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	97.58
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.39
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	92.01
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	91.15
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	90.19
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	89.67
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	88.76
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	88.3
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	88.14
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	87.8
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	87.75
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	87.66
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	86.19
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	85.57
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	85.5
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	84.76
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	84.59
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	83.98
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	83.41

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=9.6e-40  Score=272.33  Aligned_cols=254  Identities=19%  Similarity=0.227  Sum_probs=207.5

Q ss_pred             CCCeEEEecCCCCCcchhhhhcCCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           14 LGELKIFRADLTDEASFDAPISRSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        14 ~~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      ..+++++.+|+.+..........+|.|+|+|+...  ....++. ..++.|+.++.+++++|++.+ +++|||+||.+ +
T Consensus        54 ~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~-~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~-~  130 (322)
T d1r6da_          54 DPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGAS-VFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQ-V  130 (322)
T ss_dssp             CTTEEEEECCTTCHHHHHHHTTTCCEEEECCSCCCHHHHHHCCH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGG-G
T ss_pred             CCCeEEEEeccccchhhhccccccceEEeecccccccccccchH-HHhhhhHHHHHHHHHHHHHcC-CceEEEeecce-e
Confidence            36899999999999999988999999999998754  1122344 778999999999999999998 89999999997 5


Q ss_pred             cccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHH
Q 035985           92 SINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAA  171 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~  171 (293)
                      |+....   .+++|++         +..|.+.|+.+|..+|.+++.++++++++++++||++||||++...  ..+..++
T Consensus       131 yg~~~~---~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~--~~i~~~i  196 (322)
T d1r6da_         131 YGSIDS---GSWTESS---------PLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE--KLIPLFV  196 (322)
T ss_dssp             GCCCSS---SCBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT--SHHHHHH
T ss_pred             ecCCCC---CCCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC--cHHHHHH
Confidence            554433   5788988         7889999999999999999999999999999999999999987543  4555554


Q ss_pred             -HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCC-CC
Q 035985          172 -TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPT-DF  248 (293)
Q Consensus       172 -~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~-~~  248 (293)
                       ++..+++..+.+.+     +..++|+|++|+|+++..+++++..+++||+ +++.+++.|+++.+.+.+|...... ..
T Consensus       197 ~~~~~~~~i~v~~~g-----~~~r~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~  271 (322)
T d1r6da_         197 TNLLDGGTLPLYGDG-----ANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKV  271 (322)
T ss_dssp             HHHHTTCCEEEETTS-----CCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEE
T ss_pred             HHHHcCCCcEEecCC-----CeEEccEEHHHHHHHHHHHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCCccceeec
Confidence             45566665554433     4478999999999999999999888889976 7789999999999999998432111 12


Q ss_pred             CCCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          249 GDFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       249 ~~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      ...+.. ....+|++|+++ |||+|+++++|+|+++++|++++
T Consensus       272 ~~~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~n  314 (322)
T d1r6da_         272 ADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN  314 (322)
T ss_dssp             CCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence            222222 557799999997 99999999999999999999975

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-38  Score=267.14  Aligned_cols=254  Identities=15%  Similarity=0.140  Sum_probs=196.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCC--CccEEEEeccc
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTK--TVKRVILTSSA   88 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~SS~   88 (293)
                      ++++++++|++|.+.+.++++  ++|+|||+|+..+  ....++. .+++.|+.||.+|+++|++.+  +++||||+||.
T Consensus        55 ~~~~~~~~Dl~d~~~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~-~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~  133 (357)
T d1db3a_          55 PKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPE-YTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS  133 (357)
T ss_dssp             CCEEECCCCSSCHHHHHHHHHHHCCSEEEECCCCCTTTTTTSCHH-HHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG
T ss_pred             CCeEEEEeecCCHHHHHHHHhccCCCEEEEeecccccchhhhCHH-HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEch
Confidence            689999999999999999998  5699999999865  3345566 789999999999999999875  24589999998


Q ss_pred             chhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC--cc
Q 035985           89 AAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP--SS  166 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~--~~  166 (293)
                      + +||.+..   .+++|++         +..|.++|+.+|+.+|.+++.++++++++++++||+++|||.......  .+
T Consensus       134 ~-vYG~~~~---~~~~E~~---------~~~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i  200 (357)
T d1db3a_         134 E-LYGLVQE---IPQKETT---------PFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKI  200 (357)
T ss_dssp             G-GGTTCCS---SSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHH
T ss_pred             h-hhCCCCC---CCcCCCC---------CCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHH
Confidence            7 6665432   5789998         778899999999999999999999989999999999999997654432  12


Q ss_pred             HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCC-
Q 035985          167 VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKV-  244 (293)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~-  244 (293)
                      ...+.....+....+..++|    +..++|+|++|+++++.++++.+ .++.||+ +|+.+|++|+++.+.+.+|.... 
T Consensus       201 ~~~~~~~~~~~~~~~~~g~~----~~~r~~~~v~D~~~a~~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~  275 (357)
T d1db3a_         201 TRAIANIAQGLESCLYLGNM----DSLRDWGHAKDYVKMQWMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRF  275 (357)
T ss_dssp             HHHHHHHHTTSCCCEEESCT----TCEECCEEHHHHHHHHHHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEE
T ss_pred             HHHHHHHHhCCCceEEECCC----CeeecceeechHHHHHHHHHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCcccc
Confidence            23344445555544443332    34689999999999999999875 4568866 78999999999999999862100 


Q ss_pred             -------------------CCCCCC-----------CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHH
Q 035985          245 -------------------PTDFGD-----------FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLK  287 (293)
Q Consensus       245 -------------------~~~~~~-----------~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~  287 (293)
                                         +.....           .+.. ....+|++|+++ |||+|+++++|+|+++|++..
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l  350 (357)
T d1db3a_         276 EGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDL  350 (357)
T ss_dssp             ESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             ccccccccchhhhhhcccccccccCceeEeeccccCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence                               000000           0011 234579999998 999999999999999986543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=8.8e-39  Score=270.17  Aligned_cols=270  Identities=19%  Similarity=0.173  Sum_probs=202.1

Q ss_pred             hhcccCCCCeEEEecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCC------
Q 035985            8 LIALQELGELKIFRADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTK------   77 (293)
Q Consensus         8 l~~~~~~~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------   77 (293)
                      +..+...++++++++|++|+..+.++++  ++|+|||||+..+  .+..++. .++++|+.++.+++++|++.+      
T Consensus        43 ~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~p~-~~~~~N~~gt~nl~~~~~~~~~~~~~~  121 (361)
T d1kewa_          43 LSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPA-AFIETNIVGTYALLEVARKYWSALGED  121 (361)
T ss_dssp             GTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCTH-HHHHHHTHHHHHHHHHHHHHHHTSCHH
T ss_pred             HHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEECccccchhhHHhCHH-HHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence            4444445789999999999999999887  6899999999764  2223566 889999999999999998764      


Q ss_pred             --CccEEEEecccchhcccccCCCCccccCCCC-CchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCc
Q 035985           78 --TVKRVILTSSAAAVSINAQNVTGLVMDEKNW-TDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLM  154 (293)
Q Consensus        78 --~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~-~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v  154 (293)
                        ++++|||+||.. +|+.....   +..|+.. .+...+..+..|.+.|+.+|.++|.+++.++++++++++++||++|
T Consensus       122 ~~~~~~~i~~SS~~-vyg~~~~~---~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~v  197 (361)
T d1kewa_         122 KKNNFRFHHISTDE-VYGDLPHP---DEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNN  197 (361)
T ss_dssp             HHHHCEEEEEEEGG-GGCCCCCG---GGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred             ccCceEEEEeccce-eeCCCccC---CccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCce
Confidence              145999999997 55543221   1211110 0000111266789999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCccHHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHH
Q 035985          155 SGPSLTPDIPSSVALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELA  232 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~  232 (293)
                      |||+....  ..++.++ ++..|++..+.+.+     +..++|+|++|+|+++..++++...+++||+ +++.+++.|++
T Consensus       198 yGp~~~~~--~~i~~~i~~~~~g~~~~v~g~g-----~~~r~~i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~  270 (361)
T d1kewa_         198 YGPYHFPE--KLIPLVILNALEGKPLPIYGKG-----DQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVV  270 (361)
T ss_dssp             ESTTCCTT--SHHHHHHHHHHHTCCEEEETTS-----CCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHH
T ss_pred             ECcCCCcC--cHHHHHHHHHHcCCCcEEeCCC-----CeEEeCEEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHH
Confidence            99987543  3555554 45566665555432     3479999999999999999998877889977 67889999999


Q ss_pred             HHHHHhCCCC-------CCCCC-CCCCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          233 KFLNKRFPEY-------KVPTD-FGDFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       233 ~~i~~~~~~~-------~~~~~-~~~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      +.+.+.++..       ..... ....+.. ....+|++|+++ |||+|+++++|+|+++++|++++
T Consensus       271 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n  337 (361)
T d1kewa_         271 FTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             HHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             hHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence            9999876311       00111 1112222 567789999997 99999999999999999999875

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-38  Score=258.99  Aligned_cols=248  Identities=16%  Similarity=0.221  Sum_probs=191.9

Q ss_pred             CCCCcchhhhhcCCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccccCCCCc
Q 035985           24 LTDEASFDAPISRSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGL  101 (293)
Q Consensus        24 l~d~~~~~~~~~~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  101 (293)
                      +.+.+.+..++.++|+|||+|+..+  ....++. ..++.|+.++.+|+++|++.+ + +|||+||.+ +|+....   .
T Consensus        53 ~~~~~~~~~~~~~~d~VihlAa~~~~~~~~~~~~-~~~~~Nv~g~~~ll~~~~~~~-~-k~I~~SS~~-vy~~~~~---~  125 (312)
T d2b69a1          53 LINHDVVEPLYIEVDQIYHLASPASPPNYMYNPI-KTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSE-VYGDPEV---H  125 (312)
T ss_dssp             EEECCTTSCCCCCCSEEEECCSCCSHHHHTTCHH-HHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGG-GGBSCSS---S
T ss_pred             EEehHHHHHHHcCCCEEEECcccCCchhHHhCHH-HHHHHHHHHHHHHHHHHHHcC-C-cEEEEEChh-eecCCCC---C
Confidence            3333334455668999999999765  2234566 789999999999999999988 5 899999987 5554432   4


Q ss_pred             cccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHH-HHHhCCccc
Q 035985          102 VMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAA-TLITGNDFL  180 (293)
Q Consensus       102 ~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~  180 (293)
                      +++|+.+...+    +..|.+.|+.+|.++|.+++.++++++++++++||++||||+.......+++.++ +.+.|+++.
T Consensus       126 ~~~e~~~~~~~----~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~  201 (312)
T d2b69a1         126 PQSEDYWGHVN----PIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT  201 (312)
T ss_dssp             SBCTTCCCBCC----SSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEE
T ss_pred             CCCccccCCCC----CCCCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeE
Confidence            56666533322    5578899999999999999999999999999999999999988766555565554 556777766


Q ss_pred             ccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCCCCCc-c-ccc
Q 035985          181 LNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFGDFPS-E-AKL  257 (293)
Q Consensus       181 ~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~-~-~~~  257 (293)
                      +.+.+     ...++|+|++|+++++..+++.. .++.||+ ++..++++++++.+++.++. ..+..+.+... . ...
T Consensus       202 i~~~g-----~~~r~~i~v~D~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~  274 (312)
T d2b69a1         202 VYGSG-----SQTRAFQYVSDLVNGLVALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGS-GSEIQFLSEAQDDPQKR  274 (312)
T ss_dssp             EESSS-----CCEEECEEHHHHHHHHHHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTC-CCCEEEECCCTTCCCCC
T ss_pred             EeCCC-----CeeEccEEHHHHHHHHHHHHhhc-cCCceEecCCcccchhhHHHHHHHHhCC-CCceEECCCCCCCCCee
Confidence            65433     44689999999999999998765 5668866 78899999999999999874 33333222222 2 556


Q ss_pred             ccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          258 ILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       258 ~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      ..|++|+++ |||+|+++++++|+++++|++++
T Consensus       275 ~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~  307 (312)
T d2b69a1         275 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE  307 (312)
T ss_dssp             CBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             eECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Confidence            789999997 99999999999999999999874

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=3.9e-36  Score=252.81  Aligned_cols=256  Identities=15%  Similarity=0.179  Sum_probs=201.2

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++.+|++|.+.+.+++.+++.|+|+|+....  ...++. +.++.|+.++.++++++++.+  .++|++||.. +|
T Consensus        52 ~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~-~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~-vy  127 (346)
T d1oc2a_          52 DRVELVVGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPS-PFIHTNFIGTYTLLEAARKYD--IRFHHVSTDE-VY  127 (346)
T ss_dssp             SSEEEEECCTTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCH-HHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGG-GG
T ss_pred             CCeEEEEccCCCHHHHHHHHhhhhhhhhhhhcccccchhhCcc-cceeeehHhHHhhhhhhcccc--ccccccccce-Ee
Confidence            58999999999999999999999999999987642  123566 789999999999999999988  5889999987 55


Q ss_pred             ccccCC---------CCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC
Q 035985           93 INAQNV---------TGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI  163 (293)
Q Consensus        93 ~~~~~~---------~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~  163 (293)
                      +.....         ....++|++         +..|.+.|+.+|.++|.+++.+++.++++++++||+++|||+.....
T Consensus       128 g~~~~~~~~~~~~~~~~~~~~e~~---------~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~  198 (346)
T d1oc2a_         128 GDLPLREDLPGHGEGPGEKFTAET---------NYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEK  198 (346)
T ss_dssp             CCBCCGGGSTTTTCSTTSSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTS
T ss_pred             cccCccccccccccCcccccccCC---------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccc
Confidence            432110         012344444         66788999999999999999999888999999999999998764432


Q ss_pred             CccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCC
Q 035985          164 PSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEY  242 (293)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~  242 (293)
                       .....+.....+....+.+.+     +..++|+|++|+|+++++++..+..++.|++ +++..++.++++.+.+.++..
T Consensus       199 -~~~~~i~~~~~~~~~~i~~~g-----~~~r~~i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  272 (346)
T d1oc2a_         199 -FIPRQITNILAGIKPKLYGEG-----KNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQP  272 (346)
T ss_dssp             -HHHHHHHHHHHTCCCEEETTS-----CCEEECEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred             -hhHHHHHHHHcCCceeEeCCC-----CccccccchhhHHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCCC
Confidence             223334455566666555433     4479999999999999999998888888855 788999999999999999865


Q ss_pred             CCCCCCCC-CCcc-cccccchHHHHh-cCCcccc-CHHHHHHHHHHHHHHc
Q 035985          243 KVPTDFGD-FPSE-AKLILSSEKLIS-EGFCFKY-GIEDIYDQTVEYLKTK  289 (293)
Q Consensus       243 ~~~~~~~~-~~~~-~~~~~d~~k~~~-lG~~~~~-~~~~~i~~~i~~~~~~  289 (293)
                      ........ .+.. ....+|++|+++ |||+|++ +|+++|+++++|++++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n  323 (346)
T d1oc2a_         273 KDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN  323 (346)
T ss_dssp             TTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             CcceEECCCCCCCCceeeeCHHHHHHHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence            44433222 2222 456689999997 9999997 6999999999999975

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.6e-36  Score=251.91  Aligned_cols=254  Identities=20%  Similarity=0.218  Sum_probs=203.2

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVS   92 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~   92 (293)
                      ++++++.+|+.|...+......++.|+|+++...  ....++. ..++.|+.|+.+++++|++.+ +++|||+||.+ +|
T Consensus        70 ~~~~~~~~d~~d~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~-vy  146 (341)
T d1sb8a_          70 SNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPI-TSNATNIDGFLNMLIAARDAK-VQSFTYAASSS-TY  146 (341)
T ss_dssp             TTEEEEECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGG-GG
T ss_pred             CCeeEEeeccccccccccccccccccccccccccccccccCcc-chhheeehhHHHHHHHHHhcC-CceEEEcccce-ee
Confidence            5799999999999999988899999999998654  1223455 789999999999999999999 99999999998 56


Q ss_pred             ccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC--ccHHHH
Q 035985           93 INAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP--SSVALA  170 (293)
Q Consensus        93 ~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~--~~~~~~  170 (293)
                      +....   .+++|++         +..|.+.|+.+|..+|.+++.++++.+++++++||++|||++..+...  .++..+
T Consensus       147 g~~~~---~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~  214 (341)
T d1sb8a_         147 GDHPG---LPKVEDT---------IGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKW  214 (341)
T ss_dssp             TTCCC---SSBCTTC---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHH
T ss_pred             CCCCC---CCccCCC---------CCCCCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHH
Confidence            54433   5789998         778999999999999999999999989999999999999998776543  344444


Q ss_pred             H-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCC
Q 035985          171 A-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPT  246 (293)
Q Consensus       171 ~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~  246 (293)
                      . .++.|++..+.+.+     ...++|+|++|++.++..++..+.  .++.|++ ++..+|+.|+++.|.+.++...++.
T Consensus       215 ~~~~~~g~~i~~~g~g-----~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~  289 (341)
T d1sb8a_         215 TSSMIQGDDVYINGDG-----ETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSY  289 (341)
T ss_dssp             HHHHHHTCCCEEESSS-----CCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHcCCceEEcCCC-----CEEEEEEEEeccchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccc
Confidence            4 55567666555432     336999999999999999887643  3558866 6688999999999999887433322


Q ss_pred             CC----CCC-Ccc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHH
Q 035985          247 DF----GDF-PSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKT  288 (293)
Q Consensus       247 ~~----~~~-~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~  288 (293)
                      ..    ... +.. .....|++|+++ |||+|+++++++|+++++||++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~  338 (341)
T d1sb8a_         290 HREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM  338 (341)
T ss_dssp             CCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred             cccccccCCCCCCcCeeeeCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            21    111 111 456789999998 9999999999999999999987

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.2e-36  Score=250.71  Aligned_cols=263  Identities=17%  Similarity=0.185  Sum_probs=197.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      ++++++++|++|.+.+.++++  ++|+|||+|+..+  ....++. ..++.|+.|+.+++++|++.+ +++||++||.+ 
T Consensus        50 ~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~-~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~-  126 (338)
T d1udca_          50 KHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPL-EYYDNNVNGTLRLISAMRAAN-VKNFIFSSSAT-  126 (338)
T ss_dssp             SCCEEEECCTTCHHHHHHHHHHTTCSEEEECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGG-
T ss_pred             CCCEEEEeecCCHHHHHHHHhccCCCEEEECCCccchhhHHhCHH-HHHHhHHHHHHHHHHHHHHhC-CCEEEecCcce-
Confidence            579999999999999999998  7999999999754  2223556 889999999999999999998 99999999987 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-CceEEEEccCCccCCCCCCCC------
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-NIDLITVIPSLMSGPSLTPDI------  163 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~~------  163 (293)
                      +|+....   .+..|+.+        ...|.+.|+.+|..+|.++..+...+ +++++++|++++||++.....      
T Consensus       127 vy~~~~~---~~~~e~~~--------~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~  195 (338)
T d1udca_         127 VYGDQPK---IPYVESFP--------TGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQG  195 (338)
T ss_dssp             GGCSCCS---SSBCTTSC--------CCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCS
T ss_pred             EEccccc---cccccccc--------cCCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccc
Confidence            5543332   23444431        55788999999999999999776654 899999999999998765321      


Q ss_pred             --CccHHHHHHHHhCCcccccccc-c--ccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEE-eccCCCHHHHHHH
Q 035985          164 --PSSVALAATLITGNDFLLNGLK-G--MQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYIC-CAVNTSVPELAKF  234 (293)
Q Consensus       164 --~~~~~~~~~~~~~~~~~~~~~~-g--~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~-~~~~~t~~e~~~~  234 (293)
                        ..++..+.....+....+...+ .  ..++...+||+|++|++.++..++....   .+++||+ +++.+|+.|+++.
T Consensus       196 ~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~  275 (338)
T d1udca_         196 IPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNA  275 (338)
T ss_dssp             SCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHH
T ss_pred             cHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHH
Confidence              2345555555554433332211 0  0111235899999999998887765432   2347877 5678999999999


Q ss_pred             HHHhCCCCCCCCCCCCC-Ccc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc--CCC
Q 035985          235 LNKRFPEYKVPTDFGDF-PSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK--GML  292 (293)
Q Consensus       235 i~~~~~~~~~~~~~~~~-~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~--~~~  292 (293)
                      +.+.+|. +++..+... +.+ ....+|++|+++ |||+|+++++++|+++++|++++  ||.
T Consensus       276 i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lgwkp~~~l~egi~~ti~w~~~~~~~~~  337 (338)
T d1udca_         276 FSKACGK-PVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGYP  337 (338)
T ss_dssp             HHHHHTS-CCCEEEECCCTTCCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred             HHHHHCC-CCceEECCCCCCCCCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhchhhCC
Confidence            9999884 334333322 222 566789999998 99999999999999999999998  653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.2e-35  Score=245.75  Aligned_cols=262  Identities=16%  Similarity=0.118  Sum_probs=199.7

Q ss_pred             hhcccCCCCeEEEecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEE
Q 035985            8 LIALQELGELKIFRADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVI   83 (293)
Q Consensus         8 l~~~~~~~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v   83 (293)
                      |..+...++++++.+|++|.+.+.+.+.  .+++++|+|+...  ....++. .++..|+.++.+++++|++.+..++|+
T Consensus        42 l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~n~~g~~~~l~~~~~~~~~~~~i  120 (321)
T d1rpna_          42 LRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPV-TTGVVDGLGVTHLLEAIRQFSPETRFY  120 (321)
T ss_dssp             HHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHTTSHH-HHHHHHTHHHHHHHHHHHHHCTTSEEE
T ss_pred             HHHhcccCCcEEEEccccChHHhhhhhccccccccccccccccccccccchH-HHHhhhhhchHHHHHHHHHhCCCcccc
Confidence            3333333689999999999999988876  5788999987764  2233455 789999999999999999988555777


Q ss_pred             EecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC
Q 035985           84 LTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI  163 (293)
Q Consensus        84 ~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~  163 (293)
                      ++||.. +|+....   ...+|++         +..|.+.|+.+|.++|++++.++++++++++++||+++|||......
T Consensus       121 ~~Ss~~-~~~~~~~---~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~  187 (321)
T d1rpna_         121 QASTSE-MFGLIQA---ERQDENT---------PFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEF  187 (321)
T ss_dssp             EEEEGG-GGCSCSS---SSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS
T ss_pred             cccchh-hcCcccC---CCCCCCC---------CccccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccc
Confidence            777765 6665543   4677887         77899999999999999999999998999999999999999755443


Q ss_pred             C--ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCC
Q 035985          164 P--SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFP  240 (293)
Q Consensus       164 ~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~  240 (293)
                      .  .++..+.+...++...+..++|    +..++|+|++|+|+++.++++++.. +.|++ +++..|+.++++.+.+.++
T Consensus       188 ~~~~i~~~~~~~~~~~~~~i~~g~g----~~~r~~i~v~D~~~~~~~~~~~~~~-~~~ni~~~~~~s~~~~~~~~~~~~~  262 (321)
T d1rpna_         188 VTRKVTDAVARIKLGKQQELRLGNV----DAKRDWGFAGDYVEAMWLMLQQDKA-DDYVVATGVTTTVRDMCQIAFEHVG  262 (321)
T ss_dssp             HHHHHHHHHHHHHTTSCSCEEESCT----TCEEECEEHHHHHHHHHHHHHSSSC-CCEEECCSCEEEHHHHHHHHHHTTT
T ss_pred             cHHHHHHHHHHHHhCCCCcEEECCC----CeEEccEEeHHHHHHHHHHHhcCCc-CCceecccccceehhhhHHHHHHhC
Confidence            1  1234445556666555544443    3368999999999999999988754 56654 7889999999999999987


Q ss_pred             CCCCCC-CCC---CCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHH
Q 035985          241 EYKVPT-DFG---DFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKT  288 (293)
Q Consensus       241 ~~~~~~-~~~---~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~  288 (293)
                      ...... ...   ..+.. .....|++|+++ |||+|+++++|+|++|++|+.+
T Consensus       263 ~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~l~  316 (321)
T d1rpna_         263 LDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLR  316 (321)
T ss_dssp             CCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             CCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            421111 111   11112 456779999998 8999999999999999999775

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.1e-34  Score=245.57  Aligned_cols=260  Identities=14%  Similarity=0.090  Sum_probs=195.6

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCC---CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchh
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFS---SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAV   91 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~   91 (293)
                      ....+..+|+.+.+.+.++++++|+|||+|+.....   ...+. .....|+.++.+++++|++.+ +++||++||.. +
T Consensus        58 ~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~-~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~-~  134 (363)
T d2c5aa1          58 FCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHS-VIMYNNTMISFNMIEAARING-IKRFFYASSAC-I  134 (363)
T ss_dssp             TCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHHHHTTCHH-HHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGG-G
T ss_pred             ccCcEEEeechhHHHHHHHhhcCCeEeecccccccccccccccc-cccccccchhhHHHHhHHhhC-ccccccccccc-c
Confidence            457889999999999999999999999999876522   23344 788899999999999999999 99999999987 5


Q ss_pred             cccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCcc--H-H
Q 035985           92 SINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSS--V-A  168 (293)
Q Consensus        92 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~--~-~  168 (293)
                      |+....   .+.+|.......  ..+..|.+.|+.+|+++|++++.+.+.+|++++++||+++||+.+.......  . .
T Consensus       135 ~~~~~~---~~~~~~~~~~~e--~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~  209 (363)
T d2c5aa1         135 YPEFKQ---LETTNVSLKESD--AWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAA  209 (363)
T ss_dssp             SCGGGS---SSSSSCEECGGG--GSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHH
T ss_pred             cccccc---cccccccccccc--CCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccc
Confidence            554332   223332211110  1166788999999999999999999988999999999999999766543222  1 2


Q ss_pred             HHHHHH-hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCC
Q 035985          169 LAATLI-TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPT  246 (293)
Q Consensus       169 ~~~~~~-~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~  246 (293)
                      ...... ........+ +|    ...++|+|++|+++++..+++.+ .++.||+ ++..+|+.|+++.+.+..+. +.+.
T Consensus       210 ~~~~~~~~~~~~~~~g-~g----~~~rd~i~v~D~~~~~~~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~-~~~i  282 (363)
T d2c5aa1         210 FCRKAQTSTDRFEMWG-DG----LQTRSFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEK-KLPI  282 (363)
T ss_dssp             HHHHHHHCSSCEEEES-CS----CCEECCEEHHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTC-CCCE
T ss_pred             cccccccccccccccC-CC----CeEEEEeehhHHHHHHHHHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCC-CCce
Confidence            222222 233322222 22    33699999999999999998765 5678866 78899999999999998874 3443


Q ss_pred             CCCCCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          247 DFGDFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       247 ~~~~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      ...+.+.. .....|++|+++ |||+|+++++++|+++++||+++
T Consensus       283 ~~~~~~~~~~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~~  327 (363)
T d2c5aa1         283 HHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ  327 (363)
T ss_dssp             EEECCCCCCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            33333333 556689999998 99999999999999999999764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.7e-34  Score=241.62  Aligned_cols=263  Identities=15%  Similarity=0.111  Sum_probs=193.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      .+++++++|++|.+.+.++++  ++|+|||+|+...  ....++. .+..+|+.++.+++++|++.+ +++||++||..+
T Consensus        51 ~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlAa~~~~~~~~~~~~-~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~v  128 (347)
T d1z45a2          51 HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPL-RYYHNNILGTVVLLELMQQYN-VSKFVFSSSATV  128 (347)
T ss_dssp             SCCCEEECCTTCHHHHHHHHHHSCCCEEEECCSCCCHHHHHHSHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGG
T ss_pred             cCCeEEEeecCCHHHHHHHHhccCCCEEEEccccccccccccCcc-cccccchhhhHHHHHHHHhcc-cceEEeecceee
Confidence            579999999999999999886  7999999999764  2223445 788899999999999999998 999999999984


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh--CCceEEEEccCCccCCCCCCC------
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE--NNIDLITVIPSLMSGPSLTPD------  162 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~------  162 (293)
                      ++.........+++|+.         +..|.+.|+.+|.++|++++.+.+.  .+++++++|++++||+.....      
T Consensus       129 yg~~~~~~~~~~~~e~~---------~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~  199 (347)
T d1z45a2         129 YGDATRFPNMIPIPEEC---------PLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPL  199 (347)
T ss_dssp             GCCGGGSTTCCSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCS
T ss_pred             ecCcccCCCCCcccccc---------CCCCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCcc
Confidence            44333222235577776         7788899999999999999998764  478999999999999754331      


Q ss_pred             --CCccHHHHHHHHhCCcccccc-ccccccc--CCCCcceeHHhHHHHHHHhhccCC-------CCCcEEE-eccCCCHH
Q 035985          163 --IPSSVALAATLITGNDFLLNG-LKGMQML--SGSISISHVEDVCRAHIFLAEKES-------ASGRYIC-CAVNTSVP  229 (293)
Q Consensus       163 --~~~~~~~~~~~~~~~~~~~~~-~~g~~~~--~~~~~~v~v~D~a~~~~~~~~~~~-------~~~~y~~-~~~~~t~~  229 (293)
                        ...++..+.....+....+.. ++|.+..  ...+|++++.|++.+++.++....       .+++||+ +++++|+.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~  279 (347)
T d1z45a2         200 GIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVF  279 (347)
T ss_dssp             SSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHH
T ss_pred             ccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHH
Confidence              113455555555544433332 2222211  224789999999999888775321       2347877 67899999


Q ss_pred             HHHHHHHHhCCCCCCCCCCCCCCc-c-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          230 ELAKFLNKRFPEYKVPTDFGDFPS-E-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       230 e~~~~i~~~~~~~~~~~~~~~~~~-~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      |+++.+.+.++. +++..+..... . .....|++|+++ |||+|+++++|+|+++++|++++
T Consensus       280 e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~~~n  341 (347)
T d1z45a2         280 EVYHAFCKASGI-DLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTEN  341 (347)
T ss_dssp             HHHHHHHHHHTC-CCCC---------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCC-CCceEeCCCCCCCCCEeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHhC
Confidence            999999999884 34443333222 2 556789999998 99999999999999999999987

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.3e-34  Score=239.35  Aligned_cols=266  Identities=15%  Similarity=0.239  Sum_probs=193.3

Q ss_pred             ccCCCCeEEEecCCCCCcchhh-hhcCCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecc
Q 035985           11 LQELGELKIFRADLTDEASFDA-PISRSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSS   87 (293)
Q Consensus        11 ~~~~~~v~~v~~Dl~d~~~~~~-~~~~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS   87 (293)
                      +...++++++++|+++.+.+.+ +++++|+|||+|+....  ...++. ..+..|+.++.+++++|.+.+ + +++++||
T Consensus        41 ~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~-~~~~~nv~gt~~ll~~~~~~~-~-~~~~~ss  117 (342)
T d2blla1          41 FLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPL-RVFELDFEENLRIIRYCVKYR-K-RIIFPST  117 (342)
T ss_dssp             GTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHTT-C-EEEEECC
T ss_pred             hccCCCeEEEECccCChHHHHHHHHhCCCccccccccccccccccCCc-ccccccccccccccccccccc-c-ccccccc
Confidence            3334789999999999877665 66789999999997652  122344 778999999999999999988 4 6677888


Q ss_pred             cchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC---
Q 035985           88 AAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP---  164 (293)
Q Consensus        88 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~---  164 (293)
                      ..+++....    ....|..+.....  ....|.+.|+.+|..+|++++.++++++++++++|++.+||+.......   
T Consensus       118 ~~~~~~~~~----~~~~~~~~~~~~~--~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~  191 (342)
T d2blla1         118 SEVYGMCSD----KYFDEDHSNLIVG--PVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARI  191 (342)
T ss_dssp             GGGGBTCCC----SSBCTTTCCCBCC--CTTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBS
T ss_pred             ccccccccc----ccccccccccccc--ccCCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccc
Confidence            774443332    2333332211110  1445778999999999999999999999999999999999986554321   


Q ss_pred             ---ccH-HHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEE-ecc-CCCHHHHHHHH
Q 035985          165 ---SSV-ALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYIC-CAV-NTSVPELAKFL  235 (293)
Q Consensus       165 ---~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~-~~~-~~t~~e~~~~i  235 (293)
                         ..+ ..+.+.+.|++..+.+.+     +..++|+|++|+|+++..+++++.   .+.+||+ +++ .+|++|+++.+
T Consensus       192 ~~~~~~~~~~~~~~~g~~~~~~~~g-----~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i  266 (342)
T d2blla1         192 GSSRAITQLILNLVEGSPIKLIDGG-----KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEML  266 (342)
T ss_dssp             CBCHHHHHHHHHHHHTCCEEEGGGS-----CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHH
T ss_pred             cccccchHHHHHHHhCCCccccCCC-----CeeeeecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHH
Confidence               122 333466677776665543     447999999999999999998743   2458877 454 48999999999


Q ss_pred             HHhCCCCCCCCCCCCCCc---------------c-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcC
Q 035985          236 NKRFPEYKVPTDFGDFPS---------------E-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~---------------~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      .+.++.......++....               . .....|++|+++ |||+|+++++|+|+++++||+++-
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~~  338 (342)
T d2blla1         267 LASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV  338 (342)
T ss_dssp             HHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred             HHHhCCCccccccCcccccceeccccccccccccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCc
Confidence            998764322211111110               0 334579999998 999999999999999999998763

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-33  Score=236.88  Aligned_cols=255  Identities=16%  Similarity=0.109  Sum_probs=189.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCC--CccEEEEeccc
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTK--TVKRVILTSSA   88 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~SS~   88 (293)
                      .+++++.+|++|++.+.+++.  ++++|+|+|+..+.  ....+. .++++|+.++.+++++|++.+  +.++|||+||.
T Consensus        56 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~  134 (347)
T d1t2aa_          56 GNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDAVKTCGLINSVKFYQASTS  134 (347)
T ss_dssp             -CEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG
T ss_pred             CCcEEEEeecCCchhhHHHHhhcccceeeeeeeccccchhhccch-hhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecch
Confidence            468999999999999999986  67899999987542  122334 667999999999999999876  13589999998


Q ss_pred             chhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC--cc
Q 035985           89 AAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP--SS  166 (293)
Q Consensus        89 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~--~~  166 (293)
                      + +|+.+..   .+++|++         +..|.++|+.+|.++|++++.+.++++++++++||+++|||.......  ..
T Consensus       135 ~-vyg~~~~---~~~~E~~---------~~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~  201 (347)
T d1t2aa_         135 E-LYGKVQE---IPQKETT---------PFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKI  201 (347)
T ss_dssp             G-GTCSCSS---SSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHH
T ss_pred             h-eecCCCC---CCCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCcccccc
Confidence            7 6765432   5789998         778999999999999999999998889999999999999997654321  11


Q ss_pred             HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCCCC
Q 035985          167 VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKVPT  246 (293)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~~~  246 (293)
                      ...+.....+.......++|    +..++|+|++|+++++..++++...+..+...+...++++....+....+......
T Consensus       202 ~~~i~~~~~~~~~~~~~g~g----~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (347)
T d1t2aa_         202 SRSVAKIYLGQLECFSLGNL----DAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWE  277 (347)
T ss_dssp             HHHHHHHHHTSCSCEEESCT----TCEECCEEHHHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEE
T ss_pred             ceeeehhhcCCcceeecCCC----cceeeeeEecHHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhhcceeeec
Confidence            22233444444333322232    33689999999999999999987554333557788999999999988887421100


Q ss_pred             C--------CCC-------------CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHH
Q 035985          247 D--------FGD-------------FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLK  287 (293)
Q Consensus       247 ~--------~~~-------------~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~  287 (293)
                      .        ...             .+.. ..+.+|++|+++ |||+|+++++|+|+++|+|..
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~~  341 (347)
T d1t2aa_         278 GKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADV  341 (347)
T ss_dssp             SCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             ccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence            0        000             0011 345579999998 999999999999999986543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.5e-34  Score=238.53  Aligned_cols=256  Identities=16%  Similarity=0.102  Sum_probs=194.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCC----CccEEEEec
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTK----TVKRVILTS   86 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~S   86 (293)
                      ..++++.+|+++.+.+.+.++  ++|+|||+|+.....  ..++. ..+..|+.++.++++++++..    ...++++.|
T Consensus        56 ~~~~~~~~Di~~~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~-~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~s  134 (339)
T d1n7ha_          56 ALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLEAVRSHTIDSGRTVKYYQAG  134 (339)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHH-HHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred             cceEEEEccccCHHHHHHHHhhhccchhhhccccccccccccCcc-ccccccccccchhhhhhhhcccccccceeeeecc
Confidence            468899999999999998886  689999999976522  23455 788999999999999987542    134677777


Q ss_pred             ccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC--
Q 035985           87 SAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP--  164 (293)
Q Consensus        87 S~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~--  164 (293)
                      |.. +++...    ..++|++         +..|.+.|+.+|..+|.++..+.+.++++++++||++||||.......  
T Consensus       135 s~~-~~~~~~----~~~~E~~---------~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~  200 (339)
T d1n7ha_         135 SSE-MFGSTP----PPQSETT---------PFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTR  200 (339)
T ss_dssp             EGG-GGTTSC----SSBCTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHH
T ss_pred             cce-ecccCC----CCCCCCC---------CCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcc
Confidence            765 554443    4688887         778999999999999999999999999999999999999997654321  


Q ss_pred             ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEeccCCCHHHHHHHHHHhCCCCCC
Q 035985          165 SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCAVNTSVPELAKFLNKRFPEYKV  244 (293)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~~~~t~~e~~~~i~~~~~~~~~  244 (293)
                      .....+.....+....+..++|    ...+||+|++|+++++.+++.++..++.+++.+...+..++++.+.+.++....
T Consensus       201 ~i~~~~~~~~~~~~~~~~~g~~----~~~rd~~~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  276 (339)
T d1n7ha_         201 KITRALGRIKVGLQTKLFLGNL----QASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWK  276 (339)
T ss_dssp             HHHHHHHHHHHTSCCCEEESCT----TCEEECEEHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGG
T ss_pred             hhhHHHHHHhcCCCCeEEeCCC----CccccceeeehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccC
Confidence            1122233444455444444333    337999999999999999999987766667788889999999999999884311


Q ss_pred             C-CC--CC-CCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          245 P-TD--FG-DFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       245 ~-~~--~~-~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      . ..  .. ..+.. .....|++|+++ |||+|+++++++|++|++|+.+.
T Consensus       277 ~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~~  327 (339)
T d1n7ha_         277 DYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL  327 (339)
T ss_dssp             GTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             ceeeeccCCCCCCCCCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHHH
Confidence            1 11  11 11112 455679999998 99999999999999999998763

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-33  Score=234.45  Aligned_cols=253  Identities=19%  Similarity=0.237  Sum_probs=184.3

Q ss_pred             cCCCCCcchhhhhc--CCCEEEEecccCCCC---CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccccc
Q 035985           22 ADLTDEASFDAPIS--RSDIVFHVATPVNFS---SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQ   96 (293)
Q Consensus        22 ~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~   96 (293)
                      .|+.|.+.+.++++  .+|.|+|+|+.....   ..++. +++..|+.++.+++++|++.+ +++|||+||.+ +|+...
T Consensus        38 ~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~-~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~-vyg~~~  114 (315)
T d1e6ua_          38 LNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPA-DFIYQNMMIESNIIHAAHQND-VNKLLFLGSSC-IYPKLA  114 (315)
T ss_dssp             CCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGG-GSCTTC
T ss_pred             ccccCHHHHHHHHhhcCCCEEEEcchhccccccchhhHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEECCce-EcCCCC
Confidence            46777777888776  689999999876421   12333 678899999999999999998 99999999998 555443


Q ss_pred             CCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCc--cHHHH----
Q 035985           97 NVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPS--SVALA----  170 (293)
Q Consensus        97 ~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~--~~~~~----  170 (293)
                      .   .+++|+.+....    +..|.+.|+.+|.++|++++.+++++|++++++||++||||++......  ....+    
T Consensus       115 ~---~~~~E~~~~~~~----~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~  187 (315)
T d1e6ua_         115 K---QPMAESELLQGT----LEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRF  187 (315)
T ss_dssp             C---SSBCGGGTTSSC----CCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHH
T ss_pred             C---CCccCCccccCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccc
Confidence            2   456776533221    2334568999999999999999999899999999999999987654321  22111    


Q ss_pred             --HHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC---------CCCcEEE-eccCCCHHHHHHHHHHh
Q 035985          171 --ATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES---------ASGRYIC-CAVNTSVPELAKFLNKR  238 (293)
Q Consensus       171 --~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~---------~~~~y~~-~~~~~t~~e~~~~i~~~  238 (293)
                        .....+....+.+ +|    ...++|+|++|+++++..++....         ..+.++. .+...++.++++.+.+.
T Consensus       188 ~~~~~~~~~~~~~~g-~g----~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~  262 (315)
T d1e6ua_         188 HEATAQKAPDVVVWG-SG----TPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKV  262 (315)
T ss_dssp             HHHHHHTCSEEEEES-CS----CCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHH
T ss_pred             hhhhhccCCceEEcC-CC----ceEEEEEEeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHH
Confidence              2222343433333 22    225899999999999999886542         2235655 67889999999999999


Q ss_pred             CCCCCCCCCCC-CCCcc-cccccchHHHHhcCCccccCHHHHHHHHHHHHHHcC
Q 035985          239 FPEYKVPTDFG-DFPSE-AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       239 ~~~~~~~~~~~-~~~~~-~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      ++.. ....+. ..+.. ....+|++|+++|||+|+++++|+|+++++||+++.
T Consensus       263 ~~~~-~~i~~~~~~~~~~~~~~~d~sk~k~Lg~~p~~~l~e~i~~ti~w~~~N~  315 (315)
T d1e6ua_         263 VGYK-GRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQ  315 (315)
T ss_dssp             HTCC-SEEEEETTSCCCCSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred             hCCC-cceEECCCCCCCCceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHHcC
Confidence            8743 222221 12222 445789999988999999999999999999999863

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-33  Score=233.55  Aligned_cols=260  Identities=17%  Similarity=0.174  Sum_probs=192.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      .++.++++|++|.+.+.+++.  ++++|+|+|+..+  ....++. ..++.|+.++.++++++++.+ +++|+|+||.. 
T Consensus        58 ~~~~~~~~Dl~d~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~-~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~-  134 (346)
T d1ek6a_          58 RSVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPL-DYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSAT-  134 (346)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGG-
T ss_pred             CCcEEEEeeccccccccccccccccccccccccccCcHhhHhCHH-HHHHhhhcccccccchhhhcC-cccccccccce-
Confidence            579999999999999999886  5678999999765  2223566 789999999999999999999 99999999987 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-CceEEEEccCCccCCCCCCC-------
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-NIDLITVIPSLMSGPSLTPD-------  162 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~-------  162 (293)
                      +++.....  ....+..         ...+.++|+.+|..+|+.+..+++.. +++.+++|++++||+.....       
T Consensus       135 ~~~~~~~~--~~~~~~~---------~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~  203 (346)
T d1ek6a_         135 VYGNPQYL--PLDEAHP---------TGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQG  203 (346)
T ss_dssp             GGCSCSSS--SBCTTSC---------CCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSS
T ss_pred             eeeccccc--ccccccc---------ccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccc
Confidence            44443322  2222222         44577899999999999999987764 89999999999999865421       


Q ss_pred             -CCccHHHHHHHHhCCccccccccc---ccccCCCCcceeHHhHHHHHHHhhccCC---CCCcEEE-eccCCCHHHHHHH
Q 035985          163 -IPSSVALAATLITGNDFLLNGLKG---MQMLSGSISISHVEDVCRAHIFLAEKES---ASGRYIC-CAVNTSVPELAKF  234 (293)
Q Consensus       163 -~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~v~v~D~a~~~~~~~~~~~---~~~~y~~-~~~~~t~~e~~~~  234 (293)
                       ....+..+.....+....+...+.   ..+....+||+|++|+|.++..++....   .+++||+ ++..+++.|+++.
T Consensus       204 ~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~  283 (346)
T d1ek6a_         204 IPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQA  283 (346)
T ss_dssp             SCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHH
T ss_pred             cHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHH
Confidence             122345455544444333221110   0111225899999999999988765432   3347876 6789999999999


Q ss_pred             HHHhCCCCCCCCCCCCC-Ccc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHc
Q 035985          235 LNKRFPEYKVPTDFGDF-PSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTK  289 (293)
Q Consensus       235 i~~~~~~~~~~~~~~~~-~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~  289 (293)
                      |.+.++. +++..+.+. +.. .....|++|+++ |||+|+++++|+|+++++|++++
T Consensus       284 i~~~~~~-~~~~~~~~~~~~e~~~~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n  340 (346)
T d1ek6a_         284 MEKASGK-KIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN  340 (346)
T ss_dssp             HHHHHCS-CCCEEEECCCTTCCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             HHHHhCC-CCCeEECCCCCCCCCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhC
Confidence            9999984 344333322 222 566789999998 99999999999999999999987

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.5e-33  Score=240.89  Aligned_cols=267  Identities=14%  Similarity=0.099  Sum_probs=192.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCC--CCCC---ccccchhHHHHHHHHHHHHHhcCCCccEEEEecc
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNF--SSDD---PETDMIKPAIQGVVNVLKACTKTKTVKRVILTSS   87 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~--~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS   87 (293)
                      .+++++++|++|.+.+.++++  ++|+|||+|+....  +..+   +. .++..|+.|+.+++++|++.+..++|+++||
T Consensus        67 ~~i~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~-~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss  145 (393)
T d1i24a_          67 KSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAV-YTQHNNVIGTLNVLFAIKEFGEECHLVKLGT  145 (393)
T ss_dssp             CCCEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHH-HHHHHHHHHHHHHHHHHHHHCTTCEEEEECC
T ss_pred             CCcEEEEccCCCHHHHHHHHHhhcchheeccccccccccccccccccc-cccccccccccHHHHHHHHhccccceeeccc
Confidence            579999999999999999997  57999999987541  1112   23 5788999999999999999884456777777


Q ss_pred             cchhcccccCC---CCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC-
Q 035985           88 AAAVSINAQNV---TGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI-  163 (293)
Q Consensus        88 ~~~~~~~~~~~---~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~-  163 (293)
                      .. +|+.....   ......++...+  ..+.+..|.+.|+.+|..+|.++..++++++++++++||+++||++..... 
T Consensus       146 ~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~  222 (393)
T d1i24a_         146 MG-EYGTPNIDIEEGYITITHNGRTD--TLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEM  222 (393)
T ss_dssp             GG-GGCCCSSCBCSSEEEEEETTEEE--EEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGG
T ss_pred             cc-ccccccccccccccccccccccc--ccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccc
Confidence            65 65543211   001111211111  111256788999999999999999999999999999999999999764321 


Q ss_pred             --------------CccHHHH-HHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcE---EEeccC
Q 035985          164 --------------PSSVALA-ATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRY---ICCAVN  225 (293)
Q Consensus       164 --------------~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y---~~~~~~  225 (293)
                                    ...+..+ .+...+.+..+.+.+     ...+||+|++|+++++.+++++....+.|   +++++.
T Consensus       223 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~-----~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~  297 (393)
T d1i24a_         223 HEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKG-----GQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQ  297 (393)
T ss_dssp             SGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTS-----CCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEE
T ss_pred             ccccccccccccccccchhhhhHHhhcCCeeEEeeec-----ccccccccccchHHHHHHHHHhhcccceeeeecCCCCe
Confidence                          1223333 455577776666533     34699999999999999999987766644   345678


Q ss_pred             CCHHHHHHHHHHhCCCCCC--CCCC-C-C-CCcc-cccccchHHHHhcCCccccCHHHHHHHHHHHHHHcC
Q 035985          226 TSVPELAKFLNKRFPEYKV--PTDF-G-D-FPSE-AKLILSSEKLISEGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       226 ~t~~e~~~~i~~~~~~~~~--~~~~-~-~-~~~~-~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                      +|++|+++.+.+..+....  +... . + .+.. .....|++|+++|||+|+++++++++++++|+++..
T Consensus       298 ~si~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~k  368 (393)
T d1i24a_         298 FSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFK  368 (393)
T ss_dssp             EEHHHHHHHHHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTG
T ss_pred             eEHHHHHHHHHHHHHhhCCCcceeeccCCCCCCCccEecCCHHHHHHcCCccccCHHHHHHHHHHHHHHHH
Confidence            9999999999887643222  2111 1 1 1111 455778999988999999999999999999998753

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=1e-32  Score=234.96  Aligned_cols=262  Identities=21%  Similarity=0.203  Sum_probs=191.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc---CCCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccc
Q 035985           15 GELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAA   89 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~   89 (293)
                      .++.++++|++|.+.+.++++   ++|+|||+|+.....  ...+. ..++.|+.++.++++++++.+ +++++++||..
T Consensus        69 ~~~~~~~~Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~-~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~  146 (383)
T d1gy8a_          69 RYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPL-KYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAA  146 (383)
T ss_dssp             CCCEEEESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGG
T ss_pred             cceEEEECcccCHHHhhhhhhccceeehhhcccccccccccccccc-cccccccccccccchhhhccC-Ccccccccccc
Confidence            468899999999999998885   679999999976521  12333 678899999999999999999 89999999987


Q ss_pred             hhcccccCC----CCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCC-
Q 035985           90 AVSINAQNV----TGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIP-  164 (293)
Q Consensus        90 ~~~~~~~~~----~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~-  164 (293)
                       .++.....    ...++.|++         +..|.+.|+.+|..+|++++.+.+.+|++++++|++++|||+...... 
T Consensus       147 -~~~~~~~~~~~~~~~~~~e~~---------~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~  216 (383)
T d1gy8a_         147 -IFGNPTMGSVSTNAEPIDINA---------KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGE  216 (383)
T ss_dssp             -GTBSCCC-----CCCCBCTTS---------CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSC
T ss_pred             -ccccccccccccccccccccc---------CCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccc
Confidence             44433221    113455554         778999999999999999999999889999999999999998775432 


Q ss_pred             ------ccHHHHHH-HH----------------hCCcccccccc-cccccCCCCcceeHHhHHHHHHHhhccC-------
Q 035985          165 ------SSVALAAT-LI----------------TGNDFLLNGLK-GMQMLSGSISISHVEDVCRAHIFLAEKE-------  213 (293)
Q Consensus       165 ------~~~~~~~~-~~----------------~~~~~~~~~~~-g~~~~~~~~~~v~v~D~a~~~~~~~~~~-------  213 (293)
                            ..++.++. .+                .+.+..+.+.. ...++...+||+|++|+|+++..+++..       
T Consensus       217 ~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~  296 (383)
T d1gy8a_         217 HYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPND  296 (383)
T ss_dssp             CSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTT
T ss_pred             cccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccc
Confidence                  12222221 11                11222222211 0001122589999999999999988642       


Q ss_pred             --CCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCCCCC-Ccc-cccccchHHHHh-cCCccccCHHHHHHHH-HHHH
Q 035985          214 --SASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDFGDF-PSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQT-VEYL  286 (293)
Q Consensus       214 --~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~-~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~-i~~~  286 (293)
                        ...++||+ +++++|+.|+++.+.+.+|. +++...... +.+ .....|++|+++ |||+|+++++|+|.++ +.|+
T Consensus       297 ~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~-~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~  375 (383)
T d1gy8a_         297 KSKYFSVFNLGTSRGYSVREVIEVARKTTGH-PIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQ  375 (383)
T ss_dssp             GGGSEEEEEESCSCCEEHHHHHHHHHHHHCC-CCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHH
T ss_pred             cccCccEEEeCCCCceeHHHHHHHHHHHhCC-CCceEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHH
Confidence              12347877 77899999999999999874 333332222 222 556779999998 9999999999999887 5898


Q ss_pred             HHc
Q 035985          287 KTK  289 (293)
Q Consensus       287 ~~~  289 (293)
                      +++
T Consensus       376 ~~~  378 (383)
T d1gy8a_         376 RTH  378 (383)
T ss_dssp             HTC
T ss_pred             HhC
Confidence            877

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=1.5e-31  Score=224.23  Aligned_cols=261  Identities=28%  Similarity=0.314  Sum_probs=192.1

Q ss_pred             CeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccc
Q 035985           16 ELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINA   95 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~   95 (293)
                      ....+.+|+.|.+.+.+++.++|+|+|+|+..... ..+. ..+..|+.++.+++++|++.+.+++|||+||..+++...
T Consensus        63 ~~~~~~~Dl~~~~~~~~~~~~~~~v~~~a~~~~~~-~~~~-~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~  140 (342)
T d1y1pa1          63 FETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFS-NKYD-EVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPK  140 (342)
T ss_dssp             EEEEECSCTTSTTTTTTTTTTCSEEEECCCCCSCC-SCHH-HHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCC
T ss_pred             ccEEEeccccchhhhhhhcccchhhhhhccccccc-cccc-ccccchhhhHHHHHHhhhcccccccccccccceeeccCC
Confidence            34568899999999999999999999999987644 2344 778899999999999999985599999999987555433


Q ss_pred             cCCCCccccCCCCCchhh-------hccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEccCCccCCCCCCCCC-c
Q 035985           96 QNVTGLVMDEKNWTDVEF-------LSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIPSLMSGPSLTPDIP-S  165 (293)
Q Consensus        96 ~~~~~~~~~E~~~~~~~~-------~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~~~v~G~~~~~~~~-~  165 (293)
                      ....+...+|+.|.....       +..+..|.+.|+.+|..+|++++.+++++  +++++++||+.+|||...+... .
T Consensus       141 ~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~  220 (342)
T d1y1pa1         141 PNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSG  220 (342)
T ss_dssp             TTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCC
T ss_pred             CCCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCcccccc
Confidence            322224455555443211       11244566789999999999999998875  4778899999999997655433 2


Q ss_pred             cHHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcE-EEeccCCCHHHHHHHHHHhCCCCC
Q 035985          166 SVALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRY-ICCAVNTSVPELAKFLNKRFPEYK  243 (293)
Q Consensus       166 ~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y-~~~~~~~t~~e~~~~i~~~~~~~~  243 (293)
                      .+..++ ..+.+....... .     +..++|+|++|+|++++.+++++..++.| +++++.+|++|+++.|.+.+|...
T Consensus       221 ~~~~~~~~l~~g~~~~~~~-~-----~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~  294 (342)
T d1y1pa1         221 STSGWMMSLFNGEVSPALA-L-----MPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKT  294 (342)
T ss_dssp             HHHHHHHHHHTTCCCHHHH-T-----CCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSC
T ss_pred             chHHHHHHHHcCCcCcccC-C-----ccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCc
Confidence            333344 444444433322 2     34689999999999999999988777755 667889999999999999998777


Q ss_pred             CCCCCCCCCcc---cccccchHHHHhcCCccccCHHHHHHHHHH
Q 035985          244 VPTDFGDFPSE---AKLILSSEKLISEGFCFKYGIEDIYDQTVE  284 (293)
Q Consensus       244 ~~~~~~~~~~~---~~~~~d~~k~~~lG~~~~~~~~~~i~~~i~  284 (293)
                      ++..++.....   .....+.++++.|||.+.++++++|+++|+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~s~~~~k~lg~~~~~~lee~i~d~I~  338 (342)
T d1y1pa1         295 FPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVG  338 (342)
T ss_dssp             CCCCCCCCCCCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHC
T ss_pred             CCccCCccCcccccccchHHHHHHHHcCCCCCcCHHHHHHHHHH
Confidence            77665543322   222234455566999998899999999986

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.97  E-value=4.6e-31  Score=220.82  Aligned_cols=264  Identities=17%  Similarity=0.169  Sum_probs=190.6

Q ss_pred             CCCeEEEecCCCCCcchhhhhcC--CCEEEEecccCCCC--CCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccc
Q 035985           14 LGELKIFRADLTDEASFDAPISR--SDIVFHVATPVNFS--SDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAA   89 (293)
Q Consensus        14 ~~~v~~v~~Dl~d~~~~~~~~~~--~d~Vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~   89 (293)
                      .++++++.+|++|.+.+.+++++  +|+|||+|+.....  ..++. ..++.|+.||.+|+++|.+.+ ++++|++||..
T Consensus        48 ~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~-~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~  125 (338)
T d1orra_          48 LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPC-MDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTN  125 (338)
T ss_dssp             TCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEG
T ss_pred             cCCcEEEEcccCCHHHHHHHHHhcCCceEEeecccccccccccChH-HHHHHHHHHHHHHHHhhhccc-ccccccccccc
Confidence            36899999999999999999874  69999999987522  22455 888999999999999999998 77777777776


Q ss_pred             hhcccccCCCCccccCC-------CCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCC
Q 035985           90 AVSINAQNVTGLVMDEK-------NWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPD  162 (293)
Q Consensus        90 ~~~~~~~~~~~~~~~E~-------~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~  162 (293)
                      ++++.....   +..+.       .+........+..|.+.|+.+|...|.++....+.++...+++|++++|++.....
T Consensus       126 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (338)
T d1orra_         126 KVYGDLEQY---KYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFAT  202 (338)
T ss_dssp             GGGTTCTTS---CEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCB
T ss_pred             ccccccccc---ccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeecccccc
Confidence            666654321   11110       00000011125567889999999999999999998899999999999998766554


Q ss_pred             CC-ccHHHHH----HHHh--CCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCcEEE---eccCCCHHH
Q 035985          163 IP-SSVALAA----TLIT--GNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGRYIC---CAVNTSVPE  230 (293)
Q Consensus       163 ~~-~~~~~~~----~~~~--~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~y~~---~~~~~t~~e  230 (293)
                      .. ..+..+.    ....  +.+..+.+.+     ...++|+|++|++++++.++++..  .+++|++   .+..+++.|
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g-----~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e  277 (338)
T d1orra_         203 YDQGWVGWFCQKAVEIKNGINKPFTISGNG-----KQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLE  277 (338)
T ss_dssp             TTBCHHHHHHHHHHHHHTTCCCCEEEESSS-----CCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHH
T ss_pred             ccccccchhhHHHHHHHhccCCceEEeCCC-----ceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHH
Confidence            32 2233332    2222  3333333322     336999999999999999997643  4557765   346789999


Q ss_pred             HHHHHHHhCCCCCCCCCCCC-CCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHH
Q 035985          231 LAKFLNKRFPEYKVPTDFGD-FPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKT  288 (293)
Q Consensus       231 ~~~~i~~~~~~~~~~~~~~~-~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~  288 (293)
                      +++.+.+..+. +.+..... .+.. .....|++|+++ |||+|+++++|+|+++++|+++
T Consensus       278 ~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         278 LFKLLEDYCNI-DMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             HHHHHHHHHTC-CCCEEEECCCSSCCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCC-CceeEeCCCCCCCcCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence            99999998874 22322211 1222 456679999998 9999999999999999999986

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.96  E-value=1.1e-29  Score=214.05  Aligned_cols=254  Identities=19%  Similarity=0.170  Sum_probs=189.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc--CCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccch
Q 035985           15 GELKIFRADLTDEASFDAPIS--RSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAA   90 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~   90 (293)
                      ++++++.+|++|++.+.++++  .+|+|+|+|+....  ....+. .+...|+.++.++++++++.+..+.+++.||.. 
T Consensus        56 ~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~-~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~-  133 (356)
T d1rkxa_          56 DGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPV-ETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDK-  133 (356)
T ss_dssp             TTSEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGG-
T ss_pred             cCCeEEEeeccChHhhhhhhhhchhhhhhhhhccccccccccCCc-cccccccccchhhhhhhhccccccccccccccc-
Confidence            579999999999999999887  67999999997642  123455 788999999999999999987455666666554 


Q ss_pred             hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH---------hCCceEEEEccCCccCCCCCC
Q 035985           91 VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ---------ENNIDLITVIPSLMSGPSLTP  161 (293)
Q Consensus        91 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~---------~~~~~~~ilR~~~v~G~~~~~  161 (293)
                      ++......  .+.+|+.         +..|.++|+.+|...|..+..++.         +.++.++++||+++|||++..
T Consensus       134 ~~~~~~~~--~~~~~~~---------~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~  202 (356)
T d1rkxa_         134 CYDNKEWI--WGYRENE---------AMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA  202 (356)
T ss_dssp             GBCCCCSS--SCBCTTS---------CBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC
T ss_pred             cccccccc--ccccccc---------ccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcch
Confidence            55444333  4566665         667889999999999999887765         336789999999999998643


Q ss_pred             CCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-c----E--EE-eccCCCHHHHHH
Q 035985          162 DIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-R----Y--IC-CAVNTSVPELAK  233 (293)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~----y--~~-~~~~~t~~e~~~  233 (293)
                      . ..++..+.+...++...+....     ...++++|++|+++++..++......+ .    .  .. .+..++++++++
T Consensus       203 ~-~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (356)
T d1rkxa_         203 L-DRIVPDILRAFEQSQPVIIRNP-----HAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVE  276 (356)
T ss_dssp             S-SCHHHHHHHHHHTTCCEECSCT-----TCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHH
T ss_pred             h-hHHHHHHHHHHhCCCceEEeec-----cccccccccccccchhhhhhhhhcccccccccccccccccccccccchhhh
Confidence            3 2455666666666666555444     446899999999999999887654322 1    1  22 346789999999


Q ss_pred             HHHHhCCCCCCCCCCC--CCCcc-cccccchHHHHh-cCCccccCHHHHHHHHHHHHHH
Q 035985          234 FLNKRFPEYKVPTDFG--DFPSE-AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKT  288 (293)
Q Consensus       234 ~i~~~~~~~~~~~~~~--~~~~~-~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~  288 (293)
                      .+.+.++.. .+..+.  ..+.. .....|++|+++ |||+|+++++++|+++++||++
T Consensus       277 ~i~~~~~~~-~~~~~~~~~~~~~~~~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~  334 (356)
T d1rkxa_         277 QMVKYWGEG-ASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN  334 (356)
T ss_dssp             HHHHHHCTT-CCEEC-------CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred             hhHHHhCCC-ccEEEcCCCCCCCcCeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            999998742 222111  11222 556789999998 9999999999999999999986

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=7.8e-27  Score=192.15  Aligned_cols=231  Identities=16%  Similarity=0.087  Sum_probs=158.8

Q ss_pred             cCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccccCCCCccccCCCCCchhhh
Q 035985           35 SRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFL  114 (293)
Q Consensus        35 ~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~  114 (293)
                      ..+++|+|+|+.......... .....|+.++.++++++++.+ ++ ++++||..++++...    ....++.       
T Consensus        67 ~~~~~i~~~aa~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-i~-~v~~ss~~~~~~~~~----~~~~~~~-------  132 (307)
T d1eq2a_          67 GDVEAIFHEGACSSTTEWDGK-YMMDNNYQYSKELLHYCLERE-IP-FLYASSAATYGGRTS----DFIESRE-------  132 (307)
T ss_dssp             SSCCEEEECCSCCCTTCCCHH-HHHHHTHHHHHHHHHHHHHHT-CC-EEEEEEGGGGTTCCS----CBCSSGG-------
T ss_pred             cchhhhhhhcccccccccccc-ccccccccccccccccccccc-cc-ccccccccccccccc----ccccccc-------
Confidence            368999999987665544444 777888999999999999988 65 666666665555432    2334443       


Q ss_pred             ccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC--CccHHHHHHHHhCC-cccccccccccccC
Q 035985          115 SSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI--PSSVALAATLITGN-DFLLNGLKGMQMLS  191 (293)
Q Consensus       115 ~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~g~~~~~  191 (293)
                        ...|.+.|+.+|..+|.+++.++++++++++++||+++|||......  ...+..+...+..+ ...+..+++    .
T Consensus       133 --~~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~  206 (307)
T d1eq2a_         133 --YEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSE----N  206 (307)
T ss_dssp             --GCCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC----------------
T ss_pred             --ccccccccccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCcc----c
Confidence              55688899999999999999999999999999999999999765432  23344455555444 333332332    3


Q ss_pred             CCCcceeHHhHHHHHHHhhccCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCC-CCCC-CCcc--cccccchHHHHh
Q 035985          192 GSISISHVEDVCRAHIFLAEKESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPT-DFGD-FPSE--AKLILSSEKLIS  266 (293)
Q Consensus       192 ~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~-~~~~-~~~~--~~~~~d~~k~~~  266 (293)
                      ..++|+|++|++.++..++.++. .+.|++ +++..|++|+++++.+..+...++. .+++ ....  .....|++|+++
T Consensus       207 ~~r~~~~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~~~  285 (307)
T d1eq2a_         207 FKRDFVYVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRA  285 (307)
T ss_dssp             -CBCEEEHHHHHHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHH
T ss_pred             eeeeeeecccHHHHHHHHhhhcc-ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHHHH
Confidence            46899999999999999998764 457755 7899999999999988776443321 1111 1111  334569999998


Q ss_pred             -cCCccccCHHHHHHHHHHHH
Q 035985          267 -EGFCFKYGIEDIYDQTVEYL  286 (293)
Q Consensus       267 -lG~~~~~~~~~~i~~~i~~~  286 (293)
                       +||+|+++++|+|+++++|+
T Consensus       286 ~~~~~p~~sl~egi~~~i~w~  306 (307)
T d1eq2a_         286 AGYDKPFKTVAEGVTEYMAWL  306 (307)
T ss_dssp             TTCCCCCCCHHHHHHHHHHHT
T ss_pred             HHCCCCCCCHHHHHHHHHHhC
Confidence             89999999999999999996

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.93  E-value=1.6e-25  Score=182.16  Aligned_cols=238  Identities=15%  Similarity=0.132  Sum_probs=174.4

Q ss_pred             CeEEEec-----CCCCCcchhhhhc--CCCEEEEecccCCC--CCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           16 ELKIFRA-----DLTDEASFDAPIS--RSDIVFHVATPVNF--SSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        16 ~v~~v~~-----Dl~d~~~~~~~~~--~~d~Vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      +.+++..     |+.|.+.+.++++  ++|+|||+|+....  ....+. .....|+.....+++.++..+  .+++++|
T Consensus        25 g~~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~--~~~~~~s  101 (281)
T d1vl0a_          25 NVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYD-LAYKINAIGPKNLAAAAYSVG--AEIVQIS  101 (281)
T ss_dssp             SEEEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHH-HHHHHHTHHHHHHHHHHHHHT--CEEEEEE
T ss_pred             CCEEEEeechhccCCCHHHHHHHHHHcCCCEEEeeccccccccccccch-hhccccccccccccccccccc--ccccccc
Confidence            5566554     5677778888886  68999999987641  112333 667788889999988888876  5788888


Q ss_pred             ccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCcc
Q 035985           87 SAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSS  166 (293)
Q Consensus        87 S~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~  166 (293)
                      |.. +++....   .+.+|.+         +..|.+.|+.+|...|.+++.    .+.+++++||+++||++.+     .
T Consensus       102 s~~-v~~~~~~---~~~~e~~---------~~~~~~~~~~~k~~~e~~~~~----~~~~~~i~R~~~vyG~~~~-----~  159 (281)
T d1vl0a_         102 TDY-VFDGEAK---EPITEFD---------EVNPQSAYGKTKLEGENFVKA----LNPKYYIVRTAWLYGDGNN-----F  159 (281)
T ss_dssp             EGG-GSCSCCS---SCBCTTS---------CCCCCSHHHHHHHHHHHHHHH----HCSSEEEEEECSEESSSSC-----H
T ss_pred             cce-eeecccc---ccccccc---------cccchhhhhhhhhHHHHHHHH----hCCCccccceeEEeCCCcc-----c
Confidence            876 4444432   4677877         677889999999999988754    3789999999999999753     3


Q ss_pred             HHHHH-HHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEE-EeccCCCHHHHHHHHHHhCCCCC-
Q 035985          167 VALAA-TLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYI-CCAVNTSVPELAKFLNKRFPEYK-  243 (293)
Q Consensus       167 ~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~-~~~~~~t~~e~~~~i~~~~~~~~-  243 (293)
                      ...++ ....+....+..       +..++++|++|+++++..++++.. .|.|+ ++++.+|+.|+++.+++.+|... 
T Consensus       160 ~~~~~~~~~~~~~~~~~~-------~~~~~~i~v~D~~~~~~~~~~~~~-~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~  231 (281)
T d1vl0a_         160 VKTMINLGKTHDELKVVH-------DQVGTPTSTVDLARVVLKVIDEKN-YGTFHCTCKGICSWYDFAVEIFRLTGIDVK  231 (281)
T ss_dssp             HHHHHHHHHHCSEEEEES-------SCEECCEEHHHHHHHHHHHHHHTC-CEEEECCCBSCEEHHHHHHHHHHHHCCCCE
T ss_pred             ccchhhhhccCCceeecC-------Cceeccchhhhhhhhhhhhhhhcc-cCceeEeCCCccchHHHHHHHHHHhCCCce
Confidence            33343 444455444433       447899999999999999998864 45775 57889999999999999988421 


Q ss_pred             C-CCCCCCCCcc----cccccchHHHHh-cCCccccCHHHHHHHHHHHHH
Q 035985          244 V-PTDFGDFPSE----AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLK  287 (293)
Q Consensus       244 ~-~~~~~~~~~~----~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~  287 (293)
                      + +....+++..    ....+|++|+++ |||+|+ ++++++++++++++
T Consensus       232 i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~  280 (281)
T d1vl0a_         232 VTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ  280 (281)
T ss_dssp             EEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred             EEeccHHHcCCcCCCccccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence            1 1111111111    233579999998 999998 99999999999985

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.90  E-value=1.6e-23  Score=171.40  Aligned_cols=239  Identities=14%  Similarity=0.111  Sum_probs=166.3

Q ss_pred             ecCCCCCcchhhhhc--CCCEEEEecccCC--CCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccccc
Q 035985           21 RADLTDEASFDAPIS--RSDIVFHVATPVN--FSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQ   96 (293)
Q Consensus        21 ~~Dl~d~~~~~~~~~--~~d~Vih~a~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~   96 (293)
                      .+|++|.+.+.++++  ++|+|||+||...  ....++. ..+..|+.++.++++++++.+  .+++++||..+++. ..
T Consensus        37 ~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~~~-~~  112 (298)
T d1n2sa_          37 CGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPE-LAQLLNATSVEAIAKAANETG--AWVVHYSTDYVFPG-TG  112 (298)
T ss_dssp             CCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHH-HHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGSCC-CT
T ss_pred             cCcCCCHHHHHHHHHHcCCCEEEEecccccccccccCcc-ccccccccccccchhhhhccc--cccccccccccccC-CC
Confidence            478999999999887  5799999999764  2233455 788999999999999999887  57888888874443 32


Q ss_pred             CCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHHhC
Q 035985           97 NVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITG  176 (293)
Q Consensus        97 ~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~  176 (293)
                      .   .+++|+.         +..|.+.|+.+|..+|..+....    ....++|++..|+....    .....+.+.+..
T Consensus       113 ~---~~~~E~~---------~~~p~~~y~~~k~~~e~~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  172 (298)
T d1n2sa_         113 D---IPWQETD---------ATSPLNVYGKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGN----NFAKTMLRLAKE  172 (298)
T ss_dssp             T---CCBCTTS---------CCCCSSHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC----CHHHHHHHHHHH
T ss_pred             C---CCCcccc---------ccCCCchHhhhhhhhhhhHHhhh----cccccccccceeeccCC----ccchhhhhhhcc
Confidence            2   5788887         77899999999999998886643    34556666655543221    122333343333


Q ss_pred             CcccccccccccccCCCCcceeHHhHHHHHHHhhc----cCCCCCcEEE-eccCCCHHHHHHHHHHhCCCCCCCCCC---
Q 035985          177 NDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAE----KESASGRYIC-CAVNTSVPELAKFLNKRFPEYKVPTDF---  248 (293)
Q Consensus       177 ~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~----~~~~~~~y~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~---  248 (293)
                      ... +...+     +...+++|+.|+++++..++.    .....++|++ +++.++..++++.+.+..+...+....   
T Consensus       173 ~~~-~~~~~-----~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (298)
T d1n2sa_         173 RQT-LSVIN-----DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTEL  246 (298)
T ss_dssp             CSE-EEEEC-----SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEE
T ss_pred             cce-eeccc-----ceeecccccchHHHHHHHHHhhhhccccccccccccCCCceecHHHHHHHHhhhhccCccccccce
Confidence            322 22222     335789999999999888765    3345678877 567899999999887765321111111   


Q ss_pred             -----CCCCcc----cccccchHHHHh-cCCccccCHHHHHHHHHHHHHHcC
Q 035985          249 -----GDFPSE----AKLILSSEKLIS-EGFCFKYGIEDIYDQTVEYLKTKG  290 (293)
Q Consensus       249 -----~~~~~~----~~~~~d~~k~~~-lG~~~~~~~~~~i~~~i~~~~~~~  290 (293)
                           ...+..    ....+|++|+++ |||+|+ +++++|+++++++.+..
T Consensus       247 ~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~-~~~~gl~~~i~~~~~~~  297 (298)
T d1n2sa_         247 NAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTTT  297 (298)
T ss_dssp             EEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSCC
T ss_pred             eeeehhhcCccCCCccccccCHHHHHHHHCCCCC-cHHHHHHHHHHHHHhhc
Confidence                 111100    223679999998 999998 99999999999987653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=5.7e-18  Score=130.50  Aligned_cols=156  Identities=14%  Similarity=0.141  Sum_probs=115.1

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++.+|++|++++.++++++|+|||++|....     . .....+..++.++++++++.+ ++|||++||...++..
T Consensus        46 ~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~-----~-~~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~  118 (205)
T d1hdoa_          46 RPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND-----L-SPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDP  118 (205)
T ss_dssp             CCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC-----C-SCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCT
T ss_pred             cccccccccccchhhHHHHhcCCCEEEEEeccCCc-----h-hhhhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCC
Confidence            57999999999999999999999999999986432     1 334567889999999999999 9999999998743321


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      ..                    .......|...|..+|++++    +.+++++++||+.+++......            
T Consensus       119 ~~--------------------~~~~~~~~~~~~~~~e~~l~----~~~~~~tiirp~~~~~~~~~~~------------  162 (205)
T d1hdoa_         119 TK--------------------VPPRLQAVTDDHIRMHKVLR----ESGLKYVAVMPPHIGDQPLTGA------------  162 (205)
T ss_dssp             TC--------------------SCGGGHHHHHHHHHHHHHHH----HTCSEEEEECCSEEECCCCCSC------------
T ss_pred             cc--------------------ccccccccchHHHHHHHHHH----hcCCceEEEecceecCCCCccc------------
Confidence            11                    11123468888999988764    4599999999999987533211            


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEe
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICC  222 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~  222 (293)
                          ..+...+     .....+|+++|+|++++.+++++...| .+..+
T Consensus       163 ----~~~~~~~-----~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s  202 (205)
T d1hdoa_         163 ----YTVTLDG-----RGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPS  202 (205)
T ss_dssp             ----CEEESSS-----CSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred             ----EEEeeCC-----CCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecC
Confidence                1111111     335789999999999999999887544 44443

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.2e-18  Score=135.42  Aligned_cols=164  Identities=12%  Similarity=0.029  Sum_probs=121.8

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++...+|+.+.+.+.++++++|+|||+++..... .... .+.+.|+.++.+++++|++.+ +++|||+||..+ +. 
T Consensus        59 ~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~-~~-  133 (232)
T d2bkaa1          59 KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGK-AGAE-GFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGA-DK-  133 (232)
T ss_dssp             GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHHH-HHHH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTC-CT-
T ss_pred             ceeeeeeecccccccccccccccccccccccccccc-cchh-hhhhhcccccceeeecccccC-ccccccCCcccc-cc-
Confidence            468889999999999999999999999999865321 1223 678899999999999999999 999999999762 21 


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCc-eEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNI-DLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                                              .+.+.|+.+|..+|+.+.+    .++ +++|+||+.+||++....   ....+...
T Consensus       134 ------------------------~~~~~Y~~~K~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~~~---~~~~~~~~  182 (232)
T d2bkaa1         134 ------------------------SSNFLYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESR---PGEWLVRK  182 (232)
T ss_dssp             ------------------------TCSSHHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGS---HHHHHHHH
T ss_pred             ------------------------CccchhHHHHHHhhhcccc----ccccceEEecCceeecCCCcCc---HHHHHHHH
Confidence                                    2335899999999988754    355 489999999999875432   22222222


Q ss_pred             HhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEec
Q 035985          174 ITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCA  223 (293)
Q Consensus       174 ~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~  223 (293)
                      ..+..   ...      ......||++|+|++++.++..+..++.+++++
T Consensus       183 ~~~~~---~~~------~~~~~~I~~~dvA~a~i~~~~~~~~~~~~i~~~  223 (232)
T d2bkaa1         183 FFGSL---PDS------WASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN  223 (232)
T ss_dssp             HHCSC---CTT------GGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred             Hhhcc---CCc------ccCCCeEEHHHHHHHHHHHHhcCccCCeEEEcH
Confidence            22211   110      112457999999999999998887777777654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.66  E-value=2.5e-17  Score=134.89  Aligned_cols=185  Identities=14%  Similarity=0.062  Sum_probs=129.0

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++++|+.|.+.+.+.++++++++|+++...          ...|..++.+++++|++.+ ..+++++||.+ .+..
T Consensus        54 ~~v~~v~~d~~d~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g-~~~~  121 (312)
T d1qyda_          54 LGAKLIEASLDDHQRLVDALKQVDVVISALAGGV----------LSHHILEQLKLVEAIKEAG-NIKRFLPSEFG-MDPD  121 (312)
T ss_dssp             TTCEEECCCSSCHHHHHHHHTTCSEEEECCCCSS----------SSTTTTTHHHHHHHHHHSC-CCSEEECSCCS-SCTT
T ss_pred             CCcEEEEeecccchhhhhhccCcchhhhhhhhcc----------cccchhhhhHHHHHHHHhc-CCcEEEEeecc-ccCC
Confidence            5799999999999999999999999999987532          2234445678888999888 67788888765 2221


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                      .         +..         +..|...|...|..++.    +....+++++++||+.+||+...........   ...
T Consensus       122 ~---------~~~---------~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~---~~~  176 (312)
T d1qyda_         122 I---------MEH---------ALQPGSITFIDKRKVRR----AIEAASIPYTYVSSNMFAGYFAGSLAQLDGH---MMP  176 (312)
T ss_dssp             S---------CCC---------CCSSTTHHHHHHHHHHH----HHHHTTCCBCEEECCEEHHHHTTTSSCTTCC---SSC
T ss_pred             C---------ccc---------ccchhhhhhHHHHHHHH----hhcccccceEEeccceeecCCccchhhHHHH---hhh
Confidence            1         111         33445566666666554    4556689999999999999754432111110   111


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCC-Cc-EEE-eccCCCHHHHHHHHHHhCCC
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESAS-GR-YIC-CAVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~-~~-y~~-~~~~~t~~e~~~~i~~~~~~  241 (293)
                      .+....+.+.+     +..++|+|++|+|++++.++.++... +. |++ +++.+|++|+++.+++.+|+
T Consensus       177 ~~~~~~~~~~g-----~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~  241 (312)
T d1qyda_         177 PRDKVLIYGDG-----NVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ  241 (312)
T ss_dssp             CSSEECCBTTS-----CSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             ccccccccccc-----ccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCC
Confidence            23333333322     45799999999999999999887654 44 555 45789999999999999874

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.64  E-value=4.9e-16  Score=122.64  Aligned_cols=185  Identities=16%  Similarity=0.146  Sum_probs=125.7

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCC---------------CCCccccchhHHHHHHHHHHHHHhcCCCc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFS---------------SDDPETDMIKPAIQGVVNVLKACTKTKTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~---------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~   79 (293)
                      .+++++.+|+++.+.+.++++++|+|||+|+.....               ..... .....|+.++.+++..+.... .
T Consensus        47 ~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~  124 (252)
T d2q46a1          47 GEADVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQ-YPEQVDWIGQKNQIDAAKVAG-V  124 (252)
T ss_dssp             CCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTC-SHHHHTTHHHHHHHHHHHHHT-C
T ss_pred             CCcEEEEeeeccccccccccccceeeEEEEeeccccccccchhhhhhcccccccch-hhhccccccceeecccccccc-c
Confidence            478999999999999999999999999999864310               01122 556788999999999998888 8


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSL  159 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~  159 (293)
                      +++.+.|+..... ...     +.             ...+...|...+...+    .+....+++++++||+++||+..
T Consensus       125 ~~~~~~s~~~~~~-~~~-----~~-------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~ilRp~~v~g~~~  181 (252)
T d2q46a1         125 KHIVVVGSMGGTN-PDH-----PL-------------NKLGNGNILVWKRKAE----QYLADSGTPYTIIRAGGLLDKEG  181 (252)
T ss_dssp             SEEEEEEETTTTC-TTC-----GG-------------GGGGGCCHHHHHHHHH----HHHHHSSSCEEEEEECEEECSCT
T ss_pred             cccccccccccCC-CCc-----cc-------------ccccccchhhhhhhhh----hhhhcccccceeecceEEECCCc
Confidence            8899988765221 110     00             0011224444444433    44566799999999999999975


Q ss_pred             CCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC-cEEEec----cCCCHHHHHHH
Q 035985          160 TPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG-RYICCA----VNTSVPELAKF  234 (293)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~-~y~~~~----~~~t~~e~~~~  234 (293)
                      ....         ...+....+.        ....+++|++|+|++++.+++++...+ +|++++    ...+++++.++
T Consensus       182 ~~~~---------~~~~~~~~~~--------~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~l  244 (252)
T d2q46a1         182 GVRE---------LLVGKDDELL--------QTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKAL  244 (252)
T ss_dssp             TSSC---------EEEESTTGGG--------GSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHH
T ss_pred             chhh---------hhhccCcccc--------cCCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHH
Confidence            4211         0111111111        235789999999999999999877554 786643    24678888888


Q ss_pred             HHHhCCC
Q 035985          235 LNKRFPE  241 (293)
Q Consensus       235 i~~~~~~  241 (293)
                      +.+..++
T Consensus       245 f~~i~~r  251 (252)
T d2q46a1         245 FSQVTSR  251 (252)
T ss_dssp             HTTCCCC
T ss_pred             HHHHHhc
Confidence            7766543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.60  E-value=6.2e-16  Score=119.59  Aligned_cols=140  Identities=19%  Similarity=0.130  Sum_probs=97.9

Q ss_pred             hcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcccccCCCCccccCCCCCchhh
Q 035985           34 ISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEF  113 (293)
Q Consensus        34 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  113 (293)
                      ...+|+|||++|.......... .+...|+.++.+++++|++.+ +++|+++||.++ +.                    
T Consensus        60 ~~~~d~vi~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~-~~--------------------  116 (212)
T d2a35a1          60 DGSIDTAFCCLGTTIKEAGSEE-AFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGA-DA--------------------  116 (212)
T ss_dssp             CSCCSEEEECCCCCHHHHSSHH-HHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTC-CT--------------------
T ss_pred             ccchheeeeeeeeecccccccc-ccccchhhhhhhccccccccc-cccccccccccc-cc--------------------
Confidence            3468999999987532222333 788899999999999999998 999999999763 21                    


Q ss_pred             hccCCCCCchhHHHHHHHHHHHHHHHHhCCc-eEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCC
Q 035985          114 LSSEKPPTWGYAASKTLAERAACKFAQENNI-DLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSG  192 (293)
Q Consensus       114 ~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  192 (293)
                           .+.+.|+.+|..+|+.+++    .+. +++|+||+.|||+.........        ...... ...      .+
T Consensus       117 -----~~~~~y~~~K~~~E~~l~~----~~~~~~~I~Rp~~v~G~~~~~~~~~~--------~~~~~~-~~~------~~  172 (212)
T d2a35a1         117 -----KSSIFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFRLAEI--------LAAPIA-RIL------PG  172 (212)
T ss_dssp             -----TCSSHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEEGGGG--------TTCCCC-----------C
T ss_pred             -----ccccchhHHHHHHhhhccc----cccccceeeCCcceeCCcccccHHHH--------HHHHHh-hcc------CC
Confidence                 2335899999999988753    355 5999999999998764321110        111110 010      12


Q ss_pred             CCcceeHHhHHHHHHHhhccCCCCCcEE
Q 035985          193 SISISHVEDVCRAHIFLAEKESASGRYI  220 (293)
Q Consensus       193 ~~~~v~v~D~a~~~~~~~~~~~~~~~y~  220 (293)
                      .+..||++|+|++++.++.++..+..|+
T Consensus       173 ~~~~i~v~DvA~ai~~~~~~~~~g~~~~  200 (212)
T d2a35a1         173 KYHGIEACDLARALWRLALEEGKGVRFV  200 (212)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCSEEEEE
T ss_pred             CCcEEEHHHHHHHHHHHHcCCCCCCEEE
Confidence            3556999999999999998876543443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.56  E-value=4.9e-16  Score=126.52  Aligned_cols=179  Identities=18%  Similarity=0.210  Sum_probs=124.9

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhccc
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSIN   94 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~   94 (293)
                      .+++++.+|+.+...+.+.+++++.|+|+++...              ..++.+++++++..+ ++++++.||.. ... 
T Consensus        55 ~~~~~~~~d~~~~~~~~~~~~~~~~vi~~~~~~~--------------~~~~~~~~~a~~~~~-~~~~~~~s~~~-~~~-  117 (307)
T d1qyca_          55 SGANIVHGSIDDHASLVEAVKNVDVVISTVGSLQ--------------IESQVNIIKAIKEVG-TVKRFFPSEFG-NDV-  117 (307)
T ss_dssp             TTCEEECCCTTCHHHHHHHHHTCSEEEECCCGGG--------------SGGGHHHHHHHHHHC-CCSEEECSCCS-SCT-
T ss_pred             CCcEEEEeecccchhhhhhhhhceeeeecccccc--------------cchhhHHHHHHHHhc-cccceeeeccc-ccc-
Confidence            5799999999999999999999999999986422              223456778888888 78899988864 221 


Q ss_pred             ccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHHH
Q 035985           95 AQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATLI  174 (293)
Q Consensus        95 ~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~  174 (293)
                               ++..         ...+...+...+...+.++    .+.+++++++||+++||+.......    .+....
T Consensus       118 ---------~~~~---------~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~r~~~v~g~~~~~~~~----~~~~~~  171 (307)
T d1qyca_         118 ---------DNVH---------AVEPAKSVFEVKAKVRRAI----EAEGIPYTYVSSNCFAGYFLRSLAQ----AGLTAP  171 (307)
T ss_dssp             ---------TSCC---------CCTTHHHHHHHHHHHHHHH----HHHTCCBEEEECCEEHHHHTTTTTC----TTCSSC
T ss_pred             ---------cccc---------ccccccccccccccccchh----hccCCCceecccceecCCCccchhh----hhhhhh
Confidence                     1111         1222334555555555544    4458999999999999986543211    111222


Q ss_pred             hCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCC-C-cEEE-eccCCCHHHHHHHHHHhCCC
Q 035985          175 TGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESAS-G-RYIC-CAVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       175 ~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~-~-~y~~-~~~~~t~~e~~~~i~~~~~~  241 (293)
                      .+....+...+     +..++|+|++|+|++++.+++++... + +|++ +++.+|+.|+++.+.++.|.
T Consensus       172 ~~~~~~~~~~~-----~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~  236 (307)
T d1qyca_         172 PRDKVVILGDG-----NARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK  236 (307)
T ss_dssp             CSSEEEEETTS-----CCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred             hcccceeeecc-----cccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCC
Confidence            33344343333     55799999999999999999887544 3 4555 56889999999999999985

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.37  E-value=4.5e-13  Score=111.21  Aligned_cols=182  Identities=12%  Similarity=0.025  Sum_probs=122.4

Q ss_pred             CCeEEEecCCCCCcc-hhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEecccchhcc
Q 035985           15 GELKIFRADLTDEAS-FDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTSSAAAVSI   93 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~-~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~   93 (293)
                      ++++++++|+.|+.+ +..++.++|++++.....           ...++..+.+++++|++.+ ++++++.||......
T Consensus        49 ~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~  116 (350)
T d1xgka_          49 PNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ-----------AGDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSL  116 (350)
T ss_dssp             TTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST-----------TSCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGG
T ss_pred             CCCEEEEeeCCCcHHHHHHHhcCCceEEeecccc-----------cchhhhhhhHHHHHHHHhC-CCceEEEeecccccc
Confidence            689999999999765 667888999998775321           2235667889999999999 888888888652211


Q ss_pred             cccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCCCccHHHHHHH
Q 035985           94 NAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDIPSSVALAATL  173 (293)
Q Consensus        94 ~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~  173 (293)
                       .                     ...+...|..+|...|.++.    ..+++++++|++.+++.............  ..
T Consensus       117 -~---------------------~~~~~~~~~~~k~~~~~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~~~~~--~~  168 (350)
T d1xgka_         117 -Y---------------------GPWPAVPMWAPKFTVENYVR----QLGLPSTFVYAGIYNNNFTSLPYPLFQME--LM  168 (350)
T ss_dssp             -T---------------------SSCCCCTTTHHHHHHHHHHH----TSSSCEEEEEECEEGGGCBSSSCSSCBEE--EC
T ss_pred             -C---------------------CcccchhhhhhHHHHHHHHH----hhccCceeeeeceeecccccccccccccc--cc
Confidence             1                     11233467788888776653    45789999999988875433222111000  00


Q ss_pred             HhCCcc-cccccccccccCCCCcceeH-HhHHHHHHHhhccCC---CCCcEEEeccCCCHHHHHHHHHHhCCC
Q 035985          174 ITGNDF-LLNGLKGMQMLSGSISISHV-EDVCRAHIFLAEKES---ASGRYICCAVNTSVPELAKFLNKRFPE  241 (293)
Q Consensus       174 ~~~~~~-~~~~~~g~~~~~~~~~~v~v-~D~a~~~~~~~~~~~---~~~~y~~~~~~~t~~e~~~~i~~~~~~  241 (293)
                      ..+... .....     ++..++++++ +|+++++..++....   .+.+|+++++.+|+.|+++++.+++|+
T Consensus       169 ~~~~~~~~~~~~-----~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~~~T~~eia~~l~~~~G~  236 (350)
T d1xgka_         169 PDGTFEWHAPFD-----PDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR  236 (350)
T ss_dssp             TTSCEEEEESSC-----TTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred             ccccceeeeccc-----CCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCCcCCHHHHHHHHHHHHCC
Confidence            011111 11111     1456788876 799999999886532   345778888889999999999999884

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.18  E-value=2.7e-11  Score=94.70  Aligned_cols=167  Identities=20%  Similarity=0.191  Sum_probs=112.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++..+++|++|+++++++++       ++|++||+|+......      ++. ...+++|+.++..+++++.    +.+
T Consensus        50 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~-~~~~~vNl~~~~~~~~~~~~~m~~~~  128 (243)
T d1q7ba_          50 ANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEW-NDIIETNLSSVFRLSKAVMRAMMKKR  128 (243)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhcccccccccccccc-ccccceeechhhhhHHHHHHHHHHcC
Confidence            468889999999998877764       6899999998764221      122 2678899999988888774    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       -.++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..+.|+.+
T Consensus       129 -~G~II~isS~~~~~~~~------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i  183 (243)
T d1q7ba_         129 -HGRIITIGSVVGTMGNG------------------------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFI  183 (243)
T ss_dssp             -CEEEEEECCHHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CCEeeeecchhhcCCCC------------------------CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceE
Confidence             46899999986543221                        23589999999999999887653   899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      -.+....    ........+... .  +.          .-+...+|+|++++.++....  ..| .+.++|.
T Consensus       184 ~T~~~~~----~~~~~~~~~~~~-~--pl----------~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG  239 (243)
T d1q7ba_         184 ETDMTRA----LSDDQRAGILAQ-V--PA----------GRLGGAQEIANAVAFLASDEAAYITGETLHVNGG  239 (243)
T ss_dssp             CCHHHHT----SCHHHHHHHHTT-C--TT----------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             echhhhh----hhhhHHHHHHhc-C--CC----------CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            5432111    111111111111 1  11          125679999999999886543  345 4466543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.17  E-value=6.1e-11  Score=93.18  Aligned_cols=166  Identities=18%  Similarity=0.210  Sum_probs=112.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++..+++|++|++++.++++       .+|++||.|+......      +++ ...++.|+.++..+.+++.    +.+
T Consensus        59 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~-~~~~~vNl~~~~~~~~~~~~~m~~~~  137 (251)
T d2c07a1          59 YESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEW-EDVLRTNLNSLFYITQPISKRMINNR  137 (251)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHH-HHHHHHHTTHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeeccccccccccccccHHHH-hhhheeeehhhhhhhhhcCcccccCC
Confidence            478999999999998887764       6899999998764221      122 2778899999888877654    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       -.++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..|.|+.+
T Consensus       138 -~G~IVnisS~~~~~~~~------------------------~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v  192 (251)
T d2c07a1         138 -YGRIINISSIVGLTGNV------------------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFI  192 (251)
T ss_dssp             -CEEEEEECCTHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CeEEEEECCHHhcCCCC------------------------CCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCE
Confidence             46999999987543222                        23489999999999999987654   899999999998


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      -.+....    ......+.+....   +.          .-+...+|+|++++.++....  ..| .+.++|
T Consensus       193 ~T~~~~~----~~~~~~~~~~~~~---pl----------~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDG  247 (251)
T d2c07a1         193 SSDMTDK----ISEQIKKNIISNI---PA----------GRMGTPEEVANLACFLSSDKSGYINGRVFVIDG  247 (251)
T ss_dssp             CC---------CCHHHHHHHHTTC---TT----------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ecccccc----cCHHHHHHHHhcC---CC----------CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECC
Confidence            6654321    1122223222221   11          125669999999999886543  345 445654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.16  E-value=8.6e-11  Score=91.71  Aligned_cols=161  Identities=18%  Similarity=0.219  Sum_probs=110.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++++|++|+++++++++       .+|++||+||.....      .+++ ...+++|+.++..+.+++.    +.+
T Consensus        52 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~-~~~~~vNl~~~~~~~~~~~~~m~~~~  130 (244)
T d1nffa_          52 DAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEW-QRILDVNLTGVFLGIRAVVKPMKEAG  130 (244)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHH-hHHhhcccchhhHHHHHHHhHHHhcC
Confidence            468899999999998887764       689999999976421      1112 2788899999988887653    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       -.++|++||.....+.                        .....|+.+|...+.+.+.++.++   |+++..|-|+.+
T Consensus       131 -~G~Ii~isS~~~~~~~------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i  185 (244)
T d1nffa_         131 -RGSIINISSIEGLAGT------------------------VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLV  185 (244)
T ss_dssp             -CEEEEEECCGGGTSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred             -cceEEecccccccccc------------------------ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCc
Confidence             4689999998643221                        123589999999999999988664   899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      -.+.....            .......+          ..-+...+|+|++++.++....  ..| .+.++|
T Consensus       186 ~T~~~~~~------------~~~~~~~p----------l~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDG  235 (244)
T d1nffa_         186 KTPMTDWV------------PEDIFQTA----------LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDG  235 (244)
T ss_dssp             CSGGGTTS------------CTTCSCCS----------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cChhHhhh------------hHHHHhcc----------ccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECC
Confidence            65432110            00000011          1226789999999999886433  345 456654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.15  E-value=9.8e-10  Score=87.08  Aligned_cols=173  Identities=19%  Similarity=0.227  Sum_probs=112.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC---CCC----ccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS---SDD----PETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~---~~~----~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      ..+.++++|++|+++++++++       .+|++||+||.....   ..+    ..+..++.|+.++..+.+++.    +.
T Consensus        54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~  133 (268)
T d2bgka1          54 DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA  133 (268)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc
Confidence            568889999999998887764       689999999975321   111    112577899999888887664    33


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + -.++|++||.....+..                       .....|+.+|...+.+.+.++.+.   |+++..|.|+.
T Consensus       134 ~-~g~ii~iss~~~~~~~~-----------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~  189 (268)
T d2bgka1         134 K-KGSIVFTASISSFTAGE-----------------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYI  189 (268)
T ss_dssp             T-CEEEEEECCGGGTCCCT-----------------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESC
T ss_pred             C-CCCcccccccccccccc-----------------------ccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCC
Confidence            4 46899999876433211                       112379999999999999887653   89999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +-.+.........-.............            ..-+...+|+|++++.++....  ..| .+.++|
T Consensus       190 i~T~~~~~~~~~~~~~~~~~~~~~~~~------------~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDG  250 (268)
T d2bgka1         190 VASPLLTDVFGVDSSRVEELAHQAANL------------KGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDG  250 (268)
T ss_dssp             CSCCCCTTSSSCCHHHHHHHHHHTCSS------------CSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccChHHhhhhcCCHHHHHHHHHhcccc------------CCCCcCHHHHHHHHHHHhChhhCCccCceEEECc
Confidence            877643322211111111111111110            1125669999999999886543  345 456654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.12  E-value=4.5e-10  Score=87.55  Aligned_cols=164  Identities=21%  Similarity=0.136  Sum_probs=109.5

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      +++.+++|++|+++++++++       .+|++||+||......      +++ +..+++|+.++..+.+++.    +.+ 
T Consensus        50 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~-~~~~~vNl~~~~~~~~~~~~~m~~~~-  127 (242)
T d1ulsa_          50 GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDW-ELVLRVNLTGSFLVAKAASEAMREKN-  127 (242)
T ss_dssp             TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHH-HHHHHHHHHHHHHHHHHHHHHHTTTC-
T ss_pred             CCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhh-hccccccchhhhhhhhhccccccccc-
Confidence            67899999999998887764       5899999999764221      122 2688899999988887764    333 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      -..++++||.. ..+.                        .....|+.+|...+.+.+.++.+.   |+++..+.|+.+-
T Consensus       128 ~~~i~~~ss~~-~~~~------------------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~  182 (242)
T d1ulsa_         128 PGSIVLTASRV-YLGN------------------------LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIE  182 (242)
T ss_dssp             CEEEEEECCGG-GGCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             cceeeeecccc-ccCC------------------------CCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCccc
Confidence            45677777753 2211                        123589999999999999887654   8999999999986


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .+....    .............   +.          .-+...+|+|.+++.++....  ..| .+.++|
T Consensus       183 T~~~~~----~~~~~~~~~~~~~---pl----------~R~~~pedia~~v~fL~S~~s~~itG~~i~vDG  236 (242)
T d1ulsa_         183 TRMTAK----VPEKVREKAIAAT---PL----------GRAGKPLEVAYAALFLLSDESSFITGQVLFVDG  236 (242)
T ss_dssp             CTTTSS----SCHHHHHHHHHTC---TT----------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             Chhhhc----CCHHHHHHHHhcC---CC----------CCCCCHHHHHHHHHHHhchhhCCCCCcEEEECC
Confidence            554322    1122222221111   11          124568999999999886543  345 445644

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.12  E-value=3.8e-10  Score=88.51  Aligned_cols=168  Identities=17%  Similarity=0.034  Sum_probs=110.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++++|++|+++++++++       .+|++||+||......      ++. ...++.|+.++..+.+++.    +.+
T Consensus        51 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~-~~~~~vN~~~~~~~~~~~~p~m~~~~  129 (254)
T d1hdca_          51 DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERF-RKVVEINLTGVFIGMKTVIPAMKDAG  129 (254)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCcccccccccccccccc-chhhhHHhhHHHHHHHHHHHHHhhcC
Confidence            468999999999998887764       6899999999764221      112 2678899999988888764    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       -.++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..|.|+.+
T Consensus       130 -~G~II~isS~~~~~~~------------------------~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v  184 (254)
T d1hdca_         130 -GGSIVNISSAAGLMGL------------------------ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMT  184 (254)
T ss_dssp             -CEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CCeecccccchhcccc------------------------cchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcc
Confidence             4799999998643322                        123589999999999999988653   799999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ..+.           ................     ...+--+..+|+|.+++.++....  ..| .+.++|.
T Consensus       185 ~T~~-----------~~~~~~~~~~~~~~~~-----pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG  241 (254)
T d1hdca_         185 YTPM-----------TAETGIRQGEGNYPNT-----PMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             CCHH-----------HHHHTCCCSTTSCTTS-----TTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCcc-----------chhcCHHHHHHHHhCC-----CCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCC
Confidence            5421           1111111000000000     001212357999999999886543  345 4566543

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.11  E-value=8.2e-11  Score=92.61  Aligned_cols=169  Identities=19%  Similarity=0.183  Sum_probs=112.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-----CCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-----DDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      .++..+++|++|+++++++++       ++|++||+||......     ++. ...+++|+.++..+.+++.    +.+ 
T Consensus        60 ~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~-~~~~~vNl~~~~~~~~~~~~~m~~~~-  137 (255)
T d1fmca_          60 GQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADF-RRAYELNVFSFFHLSQLVAPEMEKNG-  137 (255)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHH-HHHHHHHHHHhhhhHHHHHhhhcccc-
Confidence            478999999999998877653       6899999999764221     112 2678899999988887664    334 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~  155 (293)
                      -.++|++||.....+.                        .....|+.+|...+.+.+.++.+   +|+++..|-|+.|-
T Consensus       138 ~g~Ii~isS~~~~~~~------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~  193 (255)
T d1fmca_         138 GGVILTITSMAAENKN------------------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAIL  193 (255)
T ss_dssp             CEEEEEECCGGGTCCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred             ccccccccccchhccc------------------------cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCc
Confidence            3589999997643221                        12358999999999999988865   38999999999886


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEeccC
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAVN  225 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~~  225 (293)
                      .+.......   ......+...   ++.          .-+...+|+|++++.++....  ..| .+.++|..
T Consensus       194 T~~~~~~~~---~e~~~~~~~~---~pl----------~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         194 TDALKSVIT---PEIEQKMLQH---TPI----------RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             SHHHHTTCC---HHHHHHHHHT---CSS----------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             ChHhhccCC---HHHHHHHHhc---CCC----------CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence            542111111   1112222111   111          124568999999999886543  345 44666544

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.11  E-value=3.4e-10  Score=88.58  Aligned_cols=169  Identities=14%  Similarity=0.107  Sum_probs=108.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++..+++|++|+++++++++       ++|++||+||......      +++. ..++.|+.++..+.+++.    +.+
T Consensus        52 ~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~-~~~~vNl~~~~~~~~~~~~~m~~~~  130 (247)
T d2ew8a1          52 RRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWK-KTFEINVDSGFLMAKAFVPGMKRNG  130 (247)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhh-hhheeehhhhhHHHHHHHhHHHhcC
Confidence            578999999999998887754       6899999999864221      1223 788899999988887664    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       -.++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..|.|+.+
T Consensus       131 -~G~Iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i  185 (247)
T d2ew8a1         131 -WGRIINLTSTTYWLKI------------------------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLV  185 (247)
T ss_dssp             -CEEEEEECCGGGGSCC------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC
T ss_pred             -CCCccccccchhcccC------------------------cccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCC
Confidence             4689999998643221                        123589999999999999887653   899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      -.+......   ..............            ..-+...+|+|++++.++....  ..| ...++|.
T Consensus       186 ~T~~~~~~~---~~~~~~~~~~~~~~------------l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  243 (247)
T d2ew8a1         186 RTATTEASA---LSAMFDVLPNMLQA------------IPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG  243 (247)
T ss_dssp             ---------------------CTTSS------------SCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             CCccccccc---cchhHHHHHHHhcc------------CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            655322110   00001111111000            1124568999999999886543  345 4466553

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.11  E-value=1.6e-10  Score=90.09  Aligned_cols=148  Identities=16%  Similarity=0.110  Sum_probs=105.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++..+.+|++|+++++++++       .+|++||+||.....      .++. +..+++|+.++..+.+++.    +.+
T Consensus        57 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~-~~~~~vNl~g~~~~~~~~~~~m~~~~  135 (240)
T d2bd0a1          57 ALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDF-DYTMNTNLKGTFFLTQALFALMERQH  135 (240)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEecCCCHHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHH-hhcCCEeehHHHHHHHHHhHHHHhcC
Confidence            468889999999998877764       689999999976422      1122 2788899999988877664    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       -.++|++||.....+.+                        ....|+.+|...+.+.+.++.+   +|+++..+.|+.+
T Consensus       136 -~G~Ii~isS~~~~~~~~------------------------~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v  190 (240)
T d2bd0a1         136 -SGHIFFITSVAATKAFR------------------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAV  190 (240)
T ss_dssp             -CEEEEEECCGGGTSCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCB
T ss_pred             -CCceEEEechhhcCCCC------------------------CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcc
Confidence             46899999986433221                        2358999999999999988765   4899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES  214 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~  214 (293)
                      -.+.....               ..           .....+...+|+|++++.++..+.
T Consensus       191 ~T~~~~~~---------------~~-----------~~~~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         191 YTPMWGKV---------------DD-----------EMQALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             CSTTTCCC---------------CS-----------TTGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             cCchhhhc---------------CH-----------hhHhcCCCHHHHHHHHHHHHcCCc
Confidence            55421110               00           001224558999999999988653

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.11  E-value=6.5e-11  Score=92.57  Aligned_cols=166  Identities=23%  Similarity=0.217  Sum_probs=111.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++..+++|++|+++++++++       ++|++||+|+.....      .++. +..++.|+.++..+.+++.    +.+
T Consensus        51 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~-~~~~~vNl~~~~~~~~~~~~~m~~~~  129 (244)
T d1edoa_          51 GQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQW-DEVIDLNLTGVFLCTQAATKIMMKKR  129 (244)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccccccchhccchHHH-HHHHhhhhhhHHHHHHHHHHHHHHcC
Confidence            468899999999998877764       689999999876422      1122 2788899999988877664    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       -.++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..+.|+.+
T Consensus       130 -~G~IVnisS~~~~~~~~------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i  184 (244)
T d1edoa_         130 -KGRIINIASVVGLIGNI------------------------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFI  184 (244)
T ss_dssp             -CEEEEEECCTHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSB
T ss_pred             -CcEEEEEcChhhcCCCC------------------------CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEeccee
Confidence             46999999987544322                        23589999999999999988764   899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhh-ccC--CCCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLA-EKE--SASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~-~~~--~~~~-~y~~~~  223 (293)
                      -.+....    ........+.... ++            .-+...+|+|++++.++ ...  ...| .+.++|
T Consensus       185 ~T~~~~~----~~~~~~~~~~~~~-pl------------~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdG  240 (244)
T d1edoa_         185 ASDMTAK----LGEDMEKKILGTI-PL------------GRTGQPENVAGLVEFLALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             CSHHHHT----TCHHHHHHHHTSC-TT------------CSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred             ccHHHHH----hhHHHHHHHHhcC-CC------------CCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCC
Confidence            5432111    1111222222111 11            12566899999999875 332  2344 445544

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.10  E-value=2.4e-10  Score=89.69  Aligned_cols=168  Identities=18%  Similarity=0.178  Sum_probs=109.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++++|++|+++++++++       ++|++||+|+......      ++. ...++.|+.++..+.+++.    +.+
T Consensus        54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~-~~~~~vnl~g~~~~~~~~~~~m~~~~  132 (251)
T d1zk4a1          54 DQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEW-RKLLAVNLDGVFFGTRLGIQRMKNKG  132 (251)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccccchhcccccch-hhhccccccccchhHHHHHHHHHhcC
Confidence            579999999999998877764       6899999998764221      112 2688899999988888764    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH-----hCCceEEEEccC
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ-----ENNIDLITVIPS  152 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~-----~~~~~~~ilR~~  152 (293)
                      .-.++|++||.....+.                        .....|+.+|...+.+.+.++.     .+|+++..|.|+
T Consensus       133 ~gg~Ii~isS~~~~~~~------------------------~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG  188 (251)
T d1zk4a1         133 LGASIINMSSIEGFVGD------------------------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPG  188 (251)
T ss_dssp             SCEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEEC
T ss_pred             CCCceEeeeccceeccC------------------------CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCC
Confidence            22489999997643221                        1235899999999999887764     348999999999


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .|-.+......  . .   .........++.          .-+...+|+|++++.++....  ..| .+.++|
T Consensus       189 ~i~T~~~~~~~--~-~---~~~~~~~~~~pl----------~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDG  246 (251)
T d1zk4a1         189 YIKTPLVDDLP--G-A---EEAMSQRTKTPM----------GHIGEPNDIAYICVYLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             CBCCHHHHTST--T-H---HHHHTSTTTCTT----------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCCChhHHhcC--C-H---HHHHHHHhCCCC----------CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECc
Confidence            88543211100  0 0   000011100111          125679999999999886543  345 446654

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.10  E-value=2.6e-10  Score=90.02  Aligned_cols=117  Identities=23%  Similarity=0.246  Sum_probs=88.7

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC--C-----CCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS--S-----DDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~--~-----~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .++..+++|++|+++++++++       .+|++||+||.....  .     ++. ...++.|+.++..+.+++.    +.
T Consensus        54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~-~~~~~vnl~~~~~~~~~~~~~m~~~  132 (260)
T d1zema1          54 VEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDF-ARVLTINVTGAFHVLKAVSRQMITQ  132 (260)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHH-HhhccccccccccchhhHHhhhhhh
Confidence            478999999999998877764       689999999965311  1     112 2678899999988887764    23


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + -.++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..|.|+.
T Consensus       133 ~-~G~II~isS~~~~~~~~------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~  187 (260)
T d1zema1         133 N-YGRIVNTASMAGVKGPP------------------------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGY  187 (260)
T ss_dssp             T-CEEEEEECCHHHHSCCT------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred             c-CCCCCeeechhhccCCc------------------------chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCc
Confidence            3 46999999987543222                        23489999999999999887664   79999999998


Q ss_pred             ccCC
Q 035985          154 MSGP  157 (293)
Q Consensus       154 v~G~  157 (293)
                      |-.+
T Consensus       188 v~T~  191 (260)
T d1zema1         188 MGPG  191 (260)
T ss_dssp             BCSS
T ss_pred             ccCc
Confidence            8654

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.09  E-value=6.9e-11  Score=93.29  Aligned_cols=116  Identities=18%  Similarity=0.141  Sum_probs=89.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhcC-----
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTKT-----   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~-----   76 (293)
                      .++..+++|++|+++++++++       ++|++||+||.....      .++.. ..+++|+.++..+++++...     
T Consensus        51 ~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~p~~~~~~  129 (257)
T d2rhca1          51 VEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWL-DVVETNLTGVFRVTKQVLKAGGMLE  129 (257)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHTTTSHHH
T ss_pred             CcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHH-HHHHHHhhhhhHHHHHHhHHHHHHh
Confidence            478999999999998887764       589999999976422      11222 78899999999999987542     


Q ss_pred             -CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccC
Q 035985           77 -KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPS  152 (293)
Q Consensus        77 -~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~  152 (293)
                       + ..++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..|.|+
T Consensus       130 ~~-~g~Ii~i~S~~~~~~~~------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG  184 (257)
T d2rhca1         130 RG-TGRIVNIASTGGKQGVV------------------------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPG  184 (257)
T ss_dssp             HT-EEEEEEECCGGGTSCCT------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEEC
T ss_pred             cC-Ccccccccccccccccc------------------------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeC
Confidence             3 46899999976433221                        23589999999999999998875   7999999999


Q ss_pred             CccC
Q 035985          153 LMSG  156 (293)
Q Consensus       153 ~v~G  156 (293)
                      .|-.
T Consensus       185 ~i~T  188 (257)
T d2rhca1         185 FVET  188 (257)
T ss_dssp             SBCS
T ss_pred             CCCC
Confidence            8843

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.09  E-value=4.8e-10  Score=88.22  Aligned_cols=118  Identities=17%  Similarity=0.202  Sum_probs=88.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      +++..+++|++|+++++++++       .+|++||.||......      ++. ...++.|+.++..+.+++.    +.+
T Consensus        51 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~-~~~~~vNl~g~~~~~~~~~~~~~~~~  129 (256)
T d1k2wa_          51 PAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESY-DRLFAINVSGTLFMMQAVARAMIAGG  129 (256)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHH-HhhhceeeeccccchhhccchhHHhc
Confidence            578999999999998887764       6899999999764221      112 2678899999988887643    222


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      +-.++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..|.|+.+
T Consensus       130 ~~g~Iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i  185 (256)
T d1k2wa_         130 RGGKIINMASQAGRRGE------------------------ALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVV  185 (256)
T ss_dssp             SCEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred             cCCccccccchhhcccc------------------------ccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCC
Confidence            24689999998643221                        123589999999999999887654   899999999987


Q ss_pred             cCC
Q 035985          155 SGP  157 (293)
Q Consensus       155 ~G~  157 (293)
                      -.+
T Consensus       186 ~T~  188 (256)
T d1k2wa_         186 DGE  188 (256)
T ss_dssp             CCT
T ss_pred             Cch
Confidence            654

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.08  E-value=4.4e-10  Score=87.90  Aligned_cols=169  Identities=15%  Similarity=0.135  Sum_probs=109.2

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      +..++++|++|.++++++++       ++|++||+||......      ++. +..+++|+.++..+.+++.    +.+ 
T Consensus        49 ~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~-~~~~~vNl~g~~~~~~~~~p~m~~~~-  126 (248)
T d2d1ya1          49 GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEW-RRVLEVNLTAPMHLSALAAREMRKVG-  126 (248)
T ss_dssp             TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHTTT-
T ss_pred             CCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHH-HHHHHhhhhhHhhhhhhhcccccccc-
Confidence            56788999999988877764       6899999999764211      112 2678899999988888774    334 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      -.++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..|.|+.+-
T Consensus       127 ~G~Ii~isS~~~~~~~~------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~  182 (248)
T d2d1ya1         127 GGAIVNVASVQGLFAEQ------------------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIA  182 (248)
T ss_dssp             CEEEEEECCGGGTSBCT------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred             ccccccccccccccccc------------------------ccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCC
Confidence            46999999986443221                        23589999999999999887764   8999999999875


Q ss_pred             CCCCCCC--CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPD--IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .+.....  .........+.+...   .+          ..-+...+|++.+++.++....  ..| .+.++|
T Consensus       183 T~~~~~~~~~~~~~~~~~~~~~~~---~p----------l~R~~~pedia~~v~fL~S~~s~~itG~~i~vDG  242 (248)
T d2d1ya1         183 TEAVLEAIALSPDPERTRRDWEDL---HA----------LRRLGKPEEVAEAVLFLASEKASFITGAILPVDG  242 (248)
T ss_dssp             CHHHHHHHC--------CHHHHTT---ST----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CchHHHHhhcCCCHHHHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCc
Confidence            4310000  000000000111100   00          1225679999999999886443  345 456644

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=3e-10  Score=88.71  Aligned_cols=169  Identities=15%  Similarity=0.127  Sum_probs=111.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc---CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CCCccE
Q 035985           15 GELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TKTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~   81 (293)
                      +++..+.+|++|.++++++++   ++|++||+|+.....      .++.. ..++.|+.++..+.+++..    .+.-.+
T Consensus        52 ~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~-~~~~vnl~~~~~~~~~~~~~~~~~~~~g~  130 (244)
T d1pr9a_          52 PGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFD-RSFEVNLRAVIQVSQIVARGLIARGVPGA  130 (244)
T ss_dssp             TTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             CCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccccccccchhhhhHHHHH-HHHHHhhhhhhHHHHHhhhHHHHhCCcce
Confidence            578999999999999988876   689999999876422      11222 6788999998887776542    122468


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~  158 (293)
                      +|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..|.|+.|..+.
T Consensus       131 Ii~isS~~~~~~~------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~  186 (244)
T d1pr9a_         131 IVNVSSQCSQRAV------------------------TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM  186 (244)
T ss_dssp             EEEECCGGGTSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred             Eeecccccccccc------------------------cchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChH
Confidence            9999998643221                        123589999999999999887653   8999999999886542


Q ss_pred             CCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          159 LTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ...... ... ....+....   +.          .-+...+|+|++++.++....  ..| .+.++|
T Consensus       187 ~~~~~~-~~~-~~~~~~~~~---pl----------~R~~~peevA~~v~fL~S~~a~~itG~~i~vDG  239 (244)
T d1pr9a_         187 GQATWS-DPH-KAKTMLNRI---PL----------GKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEG  239 (244)
T ss_dssp             HHTTSC-SHH-HHHHHHTTC---TT----------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             Hhhhcc-ChH-HHHHHHhcC---CC----------CCCcCHHHHHHHHHHHhCchhCCcCCcEEEECc
Confidence            111110 011 111111111   11          125679999999999886543  345 445654

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.06  E-value=3.3e-10  Score=88.02  Aligned_cols=166  Identities=18%  Similarity=0.148  Sum_probs=108.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHH----hcCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKAC----TKTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~   77 (293)
                      .++..+++|++|+++++++++       .+|++||+||.....      .++. +..+++|+.++..+.+++    ++.+
T Consensus        45 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~-~~~~~vNl~~~~~~~~~~~~~m~~~~  123 (237)
T d1uzma1          45 KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKF-EKVINANLTGAFRVAQRASRSMQRNK  123 (237)
T ss_dssp             TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             cCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHH-HHHHHhhhhhhhhhhhhhhhcccccC
Confidence            467889999999998877764       689999999975421      1122 378889999988776654    3445


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       -.++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..|.|+.+
T Consensus       124 -~g~Iv~isS~~~~~~~~------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v  178 (237)
T d1uzma1         124 -FGRMIFIGSVSGLWGIG------------------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYI  178 (237)
T ss_dssp             -CEEEEEECCCCC-----------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             -CCceEEEcchhhccCCc------------------------ccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcC
Confidence             56999999986433221                        23589999999999999887653   899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ..+....    ........... .  ++.          .-+...+|+|.+++.++....  ..| .+.++|
T Consensus       179 ~T~~~~~----~~~~~~~~~~~-~--~pl----------~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdG  233 (237)
T d1uzma1         179 DTDMTRA----LDERIQQGALQ-F--IPA----------KRVGTPAEVAGVVSFLASEDASYISGAVIPVDG  233 (237)
T ss_dssp             CCHHHHH----SCHHHHHHHGG-G--CTT----------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CChhhhc----cCHHHHHHHHh-c--CCC----------CCCcCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            5432100    00111111111 1  111          125679999999999886543  345 445644

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.05  E-value=5.3e-10  Score=88.24  Aligned_cols=117  Identities=20%  Similarity=0.160  Sum_probs=88.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++.++++|++|+++++++++       ++|++||+||......      ++. ...+++|+.++..+++++.    +.+
T Consensus        55 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~-~~~~~vNl~g~~~~~~~~~~~m~~~~  133 (260)
T d1x1ta1          55 VKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKW-DAILALNLSAVFHGTAAALPHMKKQG  133 (260)
T ss_dssp             SCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhh-hhhhhccccccccccchhhhhHhhcC
Confidence            478899999999998887764       6899999999764221      122 2788899999888777654    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                       -.++|++||.....+.+                        ....|+.+|...+.+.+.++.+   +|+++..|.|+.|
T Consensus       134 -~G~Iv~isS~~~~~~~~------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i  188 (260)
T d1x1ta1         134 -FGRIINIASAHGLVASA------------------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWV  188 (260)
T ss_dssp             -CEEEEEECCGGGTSCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCB
T ss_pred             -CceEeecccccceeccC------------------------CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCC
Confidence             46999999986443221                        2358999999999999998876   3899999999988


Q ss_pred             cCC
Q 035985          155 SGP  157 (293)
Q Consensus       155 ~G~  157 (293)
                      -.+
T Consensus       189 ~T~  191 (260)
T d1x1ta1         189 RTP  191 (260)
T ss_dssp             CC-
T ss_pred             CCh
Confidence            655

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=1.8e-10  Score=89.85  Aligned_cols=170  Identities=18%  Similarity=0.148  Sum_probs=111.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc---CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CCCccE
Q 035985           15 GELKIFRADLTDEASFDAPIS---RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TKTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~---~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~   81 (293)
                      +++..+.+|++|++.++++++   ++|++||+||.....      .++. +..++.|+.++..+.+++..    .+.-.+
T Consensus        50 ~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~-~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~  128 (242)
T d1cyda_          50 PGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAF-DRSFSVNLRSVFQVSQMVARDMINRGVPGS  128 (242)
T ss_dssp             TTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             CCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCccccchhHHHHHHHHH-HHHHHHHhccchHHHHHhchhhhhhcccCc
Confidence            578999999999999988886   589999999975421      1112 26788899999888876542    222468


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~  158 (293)
                      +|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..|-|+.+-.+.
T Consensus       129 ii~isS~~~~~~~------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~  184 (242)
T d1cyda_         129 IVNVSSMVAHVTF------------------------PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM  184 (242)
T ss_dssp             EEEECCGGGTSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred             ccccchhhccccC------------------------CccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHH
Confidence            9999997633211                        123589999999999999987754   8999999999886432


Q ss_pred             CCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          159 LTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ..... .. ......+...   .+          ..-+...+|+|++++.++....  ..| .+.++|.
T Consensus       185 ~~~~~-~~-~~~~~~~~~~---~p----------l~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG  238 (242)
T d1cyda_         185 GKKVS-AD-PEFARKLKER---HP----------LRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG  238 (242)
T ss_dssp             HHHHT-CC-HHHHHHHHHH---ST----------TSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             HHhhc-CC-HHHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcc
Confidence            10000 00 1111111110   11          1225679999999999886543  345 4466543

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=3.5e-10  Score=88.59  Aligned_cols=117  Identities=17%  Similarity=0.136  Sum_probs=87.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC--CCC----ccccchhHHHHHHHHHHHHHhcC---CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS--SDD----PETDMIKPAIQGVVNVLKACTKT---KT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~--~~~----~~~~~~~~n~~~~~~l~~~~~~~---~~   78 (293)
                      +++.++++|++|+++++++++       ++|++||+||.....  ..+    ..+..++.|+.++..+++++...   + 
T Consensus        51 ~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-  129 (250)
T d1ydea1          51 PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-  129 (250)
T ss_dssp             TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred             CCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-
Confidence            578999999999998887764       689999999965311  111    11367889999998888876532   2 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      -.++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..|.|+.|-
T Consensus       130 ~G~Ii~isS~~~~~~~~------------------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~  185 (250)
T d1ydea1         130 QGNVINISSLVGAIGQA------------------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIW  185 (250)
T ss_dssp             TCEEEEECCHHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred             CCCCccccccccccccc------------------------CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence            25899999986443221                        23589999999999999988754   8999999999885


Q ss_pred             C
Q 035985          156 G  156 (293)
Q Consensus       156 G  156 (293)
                      .
T Consensus       186 T  186 (250)
T d1ydea1         186 T  186 (250)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.03  E-value=6.5e-10  Score=87.79  Aligned_cols=157  Identities=17%  Similarity=0.167  Sum_probs=109.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCCCCC-----ccccchhHHHHHHHHHHHHHhcCCCccEEE
Q 035985           15 GELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFSSDD-----PETDMIKPAIQGVVNVLKACTKTKTVKRVI   83 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v   83 (293)
                      .++.++.+|++|++++.++++      .+|.|||+++......-.     ..+..+..|+.+..++.++.+..+ ..+||
T Consensus        62 ~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv  140 (259)
T d2fr1a1          62 ARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFV  140 (259)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEE
T ss_pred             ccccccccccchHHHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEe
Confidence            468999999999998888765      479999999986532111     112567889999999999888877 78999


Q ss_pred             EecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhCCceEEEEccCCccCCCCCCCC
Q 035985           84 LTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQENNIDLITVIPSLMSGPSLTPDI  163 (293)
Q Consensus        84 ~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~  163 (293)
                      ++||.....+.+.                        ...|+.+|...+.+.+.+..+ |++++.|.|+.+.+++.... 
T Consensus       141 ~~SS~a~~~g~~~------------------------~~~YaAaka~l~~la~~~~~~-Gi~v~~I~pg~~~~~g~~~~-  194 (259)
T d2fr1a1         141 LFSSFASAFGAPG------------------------LGGYAPGNAYLDGLAQQRRSD-GLPATAVAWGTWAGSGMAEG-  194 (259)
T ss_dssp             EEEEHHHHTCCTT------------------------CTTTHHHHHHHHHHHHHHHHT-TCCCEEEEECCBC--------
T ss_pred             eecchhhccCCcc------------------------cHHHHHHHHhHHHHHHHHHhC-CCCEEECCCCcccCCccccc-
Confidence            9999886654432                        247999999999998887665 99999999998877653211 


Q ss_pred             CccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCc
Q 035985          164 PSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGR  218 (293)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~  218 (293)
                           .....       +.. .       -...+..+++++++..++........
T Consensus       195 -----~~~~~-------~~~-~-------G~~~~~~~~~~~~l~~~l~~~~~~~~  229 (259)
T d2fr1a1         195 -----PVADR-------FRR-H-------GVIEMPPETACRALQNALDRAEVCPI  229 (259)
T ss_dssp             -----------------CTT-T-------TEECBCHHHHHHHHHHHHHTTCSSCE
T ss_pred             -----hHHHH-------HHh-c-------CCCCCCHHHHHHHHHHHHhCCCceEE
Confidence                 00010       000 0       12345689999999999987654433

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.03  E-value=7.4e-10  Score=87.30  Aligned_cols=169  Identities=20%  Similarity=0.153  Sum_probs=110.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++..+++|++|+++++++++       ++|++||+||......      ++. ...+++|+.++..+.+++.    +.+
T Consensus        57 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~-~~~~~vNl~g~~~~~~~~~~~m~~~~  135 (261)
T d1geea_          57 GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDW-NKVIDTNLTGAFLGSREAIKYFVEND  135 (261)
T ss_dssp             CEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHH-HHHHHHhcccchhHHHHHhhhhcccc
Confidence            468899999999998887764       6899999999764221      122 2778899999888877653    344


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      .-.++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..|.|+.|
T Consensus       136 ~g~~Iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v  191 (261)
T d1geea_         136 IKGTVINMSSVHEKIPW------------------------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAI  191 (261)
T ss_dssp             CCCEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred             ccccccccccchhcccC------------------------ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcC
Confidence            23568899997633211                        123489999999999999887654   899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      -.+......  .-......+... .  +.          .-+...+|+|++++.++....  ..| .+.++|
T Consensus       192 ~T~~~~~~~--~~~~~~~~~~~~-~--pl----------~R~~~pediA~~v~fL~S~~s~~itG~~i~vDG  248 (261)
T d1geea_         192 NTPINAEKF--ADPEQRADVESM-I--PM----------GYIGEPEEIAAVAAWLASSEASYVTGITLFADG  248 (261)
T ss_dssp             CSGGGHHHH--HSHHHHHHHHTT-C--TT----------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCHhHhhhc--CCHHHHHHHHhc-C--CC----------CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            654211000  001111111111 1  11          125568999999999886543  344 456644

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.02  E-value=2.9e-09  Score=83.54  Aligned_cols=165  Identities=15%  Similarity=0.062  Sum_probs=110.3

Q ss_pred             CCeEEEecCCCC-Ccchhhhh-------cCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhc------CCCcc
Q 035985           15 GELKIFRADLTD-EASFDAPI-------SRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTK------TKTVK   80 (293)
Q Consensus        15 ~~v~~v~~Dl~d-~~~~~~~~-------~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~   80 (293)
                      .++.++.+|+++ .+.+++++       .++|++||+||....  .... ..+++|+.++.++.+++..      .+...
T Consensus        55 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~--~~~~-~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g  131 (254)
T d1sbya1          55 VNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDD--HQIE-RTIAINFTGLVNTTTAILDFWDKRKGGPGG  131 (254)
T ss_dssp             SEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCCT--TCHH-HHHHHHTHHHHHHHHHHHHHHCGGGTCCCE
T ss_pred             CCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCCCH--HHHH-HHHHHHhHHHHHHHHHHHHHhhhcccCCCc
Confidence            478999999984 44455544       369999999997543  2444 8999999999888876642      12246


Q ss_pred             EEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCC
Q 035985           81 RVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGP  157 (293)
Q Consensus        81 ~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~  157 (293)
                      ++|++||.....+.+                        ....|+.+|.....+.+.++.+.   ++++..|.|+.|..+
T Consensus       132 ~Ii~isS~~~~~~~~------------------------~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~  187 (254)
T d1sbya1         132 IIANICSVTGFNAIH------------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP  187 (254)
T ss_dssp             EEEEECCGGGTSCCT------------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred             eEEEEechhhccCCC------------------------CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence            899999987543222                        23589999999999999887654   899999999998754


Q ss_pred             CCCCCCC--ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEec
Q 035985          158 SLTPDIP--SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICCA  223 (293)
Q Consensus       158 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~~  223 (293)
                      .......  .....+...                 ...+.....+++|++++.+++....+.++.++|
T Consensus       188 ~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~e~va~~~~~~~~~~~tG~vi~vdg  238 (254)
T d1sbya1         188 LVHTFNSWLDVEPRVAEL-----------------LLSHPTQTSEQCGQNFVKAIEANKNGAIWKLDL  238 (254)
T ss_dssp             HHHSCCCGGGSCTTHHHH-----------------HTTSCCEEHHHHHHHHHHHHHHCCTTCEEEEET
T ss_pred             cccccccchhHHHHHHhc-----------------cccCCCCCHHHHHHHHHHhhhCCCCCCEEEECC
Confidence            1100000  000000000                 012345578999999998887765555666755

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.01  E-value=6.4e-10  Score=87.54  Aligned_cols=170  Identities=19%  Similarity=0.160  Sum_probs=110.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC-------CCCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS-------SDDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .++..+++|++|+++++++++       ++|++||+||.....       .+++ +..+++|+.++..+.+++.    +.
T Consensus        55 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~-~~~~~vNl~g~~~~~~~~~~~m~~~  133 (258)
T d1iy8a_          55 AEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEF-DKVVSINLRGVFLGLEKVLKIMREQ  133 (258)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHH-HHHhhhhccchhhhhhhhHhhhhhh
Confidence            468899999999998887764       689999999964311       1122 2788899999998888763    22


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + -.++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..+.|+.
T Consensus       134 ~-~G~Ii~isS~~~~~~~~------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~  188 (258)
T d1iy8a_         134 G-SGMVVNTASVGGIRGIG------------------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGA  188 (258)
T ss_dssp             T-CCEEEEECCGGGTSBCS------------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECS
T ss_pred             c-CCCCcccccHhhccCCC------------------------CchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCc
Confidence            3 46899999986443221                        23589999999999999887654   89999999998


Q ss_pred             ccCCCCCCC----CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPD----IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +..+.....    ...........+...   ++          ..-+...+|+|++++.++....  ..| ...++|
T Consensus       189 v~T~~~~~~~~~~~~~~~~~~~~~~~~~---~p----------l~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDG  252 (258)
T d1iy8a_         189 IWTPMVENSMKQLDPENPRKAAEEFIQV---NP----------SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG  252 (258)
T ss_dssp             BCSHHHHHHHHHHCTTCHHHHHHHHHTT---CT----------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             ccCHHHHHHHhhcCcccHHHHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCc
Confidence            864321000    000001111111111   01          1125679999999999886543  345 446644

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=2.9e-10  Score=89.46  Aligned_cols=169  Identities=17%  Similarity=0.113  Sum_probs=107.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHh----cC--CCccE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACT----KT--KTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~--~~~~~   81 (293)
                      .++.++++|++|+++++++++       ++|++||.|+.....  +.. +.++.|+.++..+..++.    +.  +.-.+
T Consensus        54 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~~~--~~~-~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~  130 (254)
T d2gdza1          54 QKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEK--NWE-KTLQINLVSVISGTYLGLDYMSKQNGGEGGI  130 (254)
T ss_dssp             GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCSS--SHH-HHHHHHTHHHHHHHHHHHHHHCGGGTCCCEE
T ss_pred             CcEEEEEeecCCHHHHHHHHHHHHHHcCCcCeecccccccccc--cch-heeeeehhhHHHHHHHHHHHHHHhhcCCCcE
Confidence            468899999999998887764       689999999986532  344 889999988877776664    22  21257


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHH--HHH---hCCceEEEEccCCccC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACK--FAQ---ENNIDLITVIPSLMSG  156 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~--~~~---~~~~~~~ilR~~~v~G  156 (293)
                      +|++||.....+.+                        ....|+.+|...+.+.+.  ++.   .+|+++..|.|+.|-.
T Consensus       131 Iv~isS~~~~~~~~------------------------~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T  186 (254)
T d2gdza1         131 IINMSSLAGLMPVA------------------------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNT  186 (254)
T ss_dssp             EEEECCGGGTSCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSS
T ss_pred             EEeeccHhhccCCC------------------------CccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCC
Confidence            99999986433211                        235899999999988875  232   3589999999998743


Q ss_pred             CCCCCCCCc-c---HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCc-EEEec
Q 035985          157 PSLTPDIPS-S---VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGR-YICCA  223 (293)
Q Consensus       157 ~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~-y~~~~  223 (293)
                      +........ .   .......+..   .++.          .-+...+|+|++++.+++++...|. ..++|
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~---~~p~----------~r~~~pedvA~~v~fL~s~~~itG~~i~VdG  245 (254)
T d2gdza1         187 AILESIEKEENMGQYIEYKDHIKD---MIKY----------YGILDPPLIANGLITLIEDDALNGAIMKITT  245 (254)
T ss_dssp             HHHHGGGCHHHHGGGGGGHHHHHH---HHHH----------HCCBCHHHHHHHHHHHHHCTTCSSCEEEEET
T ss_pred             hhhhhccccccccccHHHHHHHHh---cCCC----------CCCcCHHHHHHHHHHHHcCCCCCCCEEEECC
Confidence            310000000 0   0000000000   0000          1245689999999999987665664 45643

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.99  E-value=2.1e-09  Score=84.22  Aligned_cols=169  Identities=18%  Similarity=0.165  Sum_probs=109.9

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++..+++|++|+++++++++       ++|++||+||.....      .++.. ..++.|+.++..+.+++.    +.+
T Consensus        55 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~-~~~~vNl~~~~~~~~~~~~~m~~~~  133 (251)
T d1vl8a_          55 VETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFR-QVIEVNLFGTYYVCREAFSLLRESD  133 (251)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHTTCS
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHH-HHHHhhhhhhhhhhhhhhhcccccc
Confidence            468899999999998877764       689999999975422      11222 678899999988887664    334


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       -.++|++||......                       +......|+.+|...+.+.+.++.+.   |+++..|.|+.+
T Consensus       134 -~G~Ii~i~S~~~~~~-----------------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i  189 (251)
T d1vl8a_         134 -NPSIINIGSLTVEEV-----------------------TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWY  189 (251)
T ss_dssp             -SCEEEEECCGGGTCC-----------------------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCB
T ss_pred             -cccccccccchhccc-----------------------cCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcc
Confidence             469999998642211                       11123589999999999999887654   899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      -.+....... . ......+...   ++.          .-+...+|+|++++.++....  ..| .+.++|
T Consensus       190 ~T~~~~~~~~-~-~~~~~~~~~~---~pl----------~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDG  246 (251)
T d1vl8a_         190 RTKMTEAVFS-D-PEKLDYMLKR---IPL----------GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDG  246 (251)
T ss_dssp             CSTTTHHHHT-C-HHHHHHHHHT---CTT----------SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCHHHHhccC-C-HHHHHHHHhc---CCC----------CCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCc
Confidence            6543211000 0 1111111111   111          124568999999998886543  345 446644

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.2e-09  Score=87.21  Aligned_cols=171  Identities=18%  Similarity=0.146  Sum_probs=111.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-----CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cCCCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-----RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KTKTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-----~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~   79 (293)
                      .++..+.+|++|++++.++++     .+|+++|.|+......      ++. ...+++|+.++.++++++.    +.+ -
T Consensus        57 ~~~~~~~~Dv~~~~~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~-~~~~~vN~~g~~~~~~~~lp~m~~~~-~  134 (285)
T d1jtva_          57 GSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAV-ASVLDVNVVGTVRMLQAFLPDMKRRG-S  134 (285)
T ss_dssp             TSEEEEECCTTCHHHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             CceEEEeccccchHhhhhhhhhccccchhhhhhcccccccccccchhHhhh-hhhhhcchhHHHHHHHHHHHHHHHcC-C
Confidence            579999999999998888764     4899999998764221      122 2678899999888887653    444 4


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..+.|+.|-.
T Consensus       135 G~Iv~isS~~g~~~~~------------------------~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T  190 (285)
T d1jtva_         135 GRVLVTGSVGGLMGLP------------------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT  190 (285)
T ss_dssp             EEEEEEEEGGGTSCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             CceEEEechhhcCCCC------------------------CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCC
Confidence            7999999986443222                        23589999999999999887663   89999999998854


Q ss_pred             CCCCCCCCcc-----------HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCcEEEe
Q 035985          157 PSLTPDIPSS-----------VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGRYICC  222 (293)
Q Consensus       157 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~y~~~  222 (293)
                      +.........           ...+...+..... +.          ..-....+|+|++++.+++.+.+.-+|+.+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g  256 (285)
T d1jtva_         191 AFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQ-VF----------REAAQNPEEVAEVFLTALRAPKPTLRYFTT  256 (285)
T ss_dssp             -------CCHHHHHHTSCHHHHHHHHHHHHHHHH-HH----------HHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred             hHHHHhccCHHHHhhccchhHHHHHHHHHHHHhh-hh----------cccCCCHHHHHHHHHHHHhCCCCCeEEecH
Confidence            4221111000           0000000000000 00          012345899999999999887665566533

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.98  E-value=6.8e-10  Score=87.46  Aligned_cols=157  Identities=15%  Similarity=0.102  Sum_probs=95.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc--------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS--------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .++..+.+|++++++++++++        .+|++||+||.....      .++.. ..+++|+.++..+.+++.    +.
T Consensus        57 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~-~~~~vNl~g~~~~~~~~~~~m~~~  135 (259)
T d1xq1a_          57 FQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFS-FHISTNLESAYHLSQLAHPLLKAS  135 (259)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEeccCCCHHHHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHH-HHHHHHhhhheeeehhhhhccccc
Confidence            478999999999987776652        489999999976421      11222 688899999988887664    33


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + -.++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..|-|+.
T Consensus       136 ~-~G~Iv~isS~~~~~~~~------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~  190 (259)
T d1xq1a_         136 G-CGNIIFMSSIAGVVSAS------------------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAV  190 (259)
T ss_dssp             S-SCEEEEEC----------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred             c-ccccccccccccccccc------------------------ccccccccccchhhhhHHHHHHhcccCeEEEEeccCc
Confidence            4 46899999976432211                        23489999999999999887654   89999999998


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      |-.+.......   ....+.+.. ..  +.          .-+...+|+|.+++.++...
T Consensus       191 i~T~~~~~~~~---~~~~~~~~~-~~--pl----------~R~~~pedvA~~v~fL~S~~  234 (259)
T d1xq1a_         191 IATPLAEAVYD---DEFKKVVIS-RK--PL----------GRFGEPEEVSSLVAFLCMPA  234 (259)
T ss_dssp             CC-----------------------------------------CCGGGGHHHHHHHTSGG
T ss_pred             ccCHHhhhhch---HHHHHHHHh-CC--CC----------CCCcCHHHHHHHHHHHhCch
Confidence            86543211100   000111000 00  11          11456899999999888643

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.98  E-value=6.8e-10  Score=87.48  Aligned_cols=170  Identities=14%  Similarity=0.115  Sum_probs=110.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc--------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS--------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      .++..+++|++|+++++++++        .+|++||+||......      ++.. ..++.|+.++..+.+++.    +.
T Consensus        57 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~-~~~~vNl~~~~~~~~~~~~~m~~~  135 (259)
T d2ae2a_          57 FKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYS-LIMSINFEAAYHLSVLAHPFLKAS  135 (259)
T ss_dssp             CEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred             CCceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHH-HHHhcccceeEEEEeeccchhhhh
Confidence            468889999999988776652        4899999999764221      1222 688899999988887664    33


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + -.++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..|.|+.
T Consensus       136 ~-~G~Ii~isS~~~~~~~------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~  190 (259)
T d2ae2a_         136 E-RGNVVFISSVSGALAV------------------------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGV  190 (259)
T ss_dssp             S-SEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECS
T ss_pred             c-cccccccccccccccc------------------------ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCc
Confidence            4 4689999997643211                        123589999999999999998764   79999999998


Q ss_pred             ccCCCCCCCCCc-cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          154 MSGPSLTPDIPS-SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      |-.+........ ........+...   ++.          .-+...+|+|++++.++....  ..| .+.++|
T Consensus       191 i~T~~~~~~~~~~~~~~~~~~~~~~---~pl----------~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  251 (259)
T d2ae2a_         191 IATSLVEMTIQDPEQKENLNKLIDR---CAL----------RRMGEPKELAAMVAFLCFPAASYVTGQIIYVDG  251 (259)
T ss_dssp             BCSHHHHHHTTSHHHHHHHHHHHHT---STT----------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccCHHHHhhhhchhhHHHHHHHHhc---CCC----------CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECC
Confidence            854321000000 001111111111   111          125668999999999887543  345 445654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.96  E-value=4.8e-10  Score=88.02  Aligned_cols=172  Identities=17%  Similarity=0.164  Sum_probs=108.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCccccchhHHHHHHHHHHHHHhcC--CCc
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDPETDMIKPAIQGVVNVLKACTKT--KTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~--~~~   79 (293)
                      .+..++++|++|.++++++++       .+|++||+||......      +++ +..+++|+.++..+++++...  .+-
T Consensus        52 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~-~~~~~vNl~~~~~~~~~~~~~m~~~~  130 (253)
T d1hxha_          52 ERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDF-SRLLKINTESVFIGCQQGIAAMKETG  130 (253)
T ss_dssp             TTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHTTTC
T ss_pred             CCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHH-HHHHHHhhhHHHHHHHHHHHHHHhcC
Confidence            468889999999988877764       6899999999764211      112 378889999988877766421  113


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-----CCceEEEEccCCc
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-----NNIDLITVIPSLM  154 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-----~~~~~~ilR~~~v  154 (293)
                      .++|++||.....+.                        .....|+.+|...+.+.+.++.+     +++++..|-|+.+
T Consensus       131 G~Iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i  186 (253)
T d1hxha_         131 GSIINMASVSSWLPI------------------------EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGI  186 (253)
T ss_dssp             EEEEEECCGGGTSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEE
T ss_pred             CceecccchhhhcCc------------------------cccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCC
Confidence            689999998643321                        12358999999999998877654     3599999999988


Q ss_pred             cCCCCCCCCC-ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIP-SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      -.+......+ ....   ..........+          .--+...+|+|++++.++....  ..| .+.++|.
T Consensus       187 ~T~~~~~~~~~~~~~---~~~~~~~~~~~----------~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         187 YTPMMQASLPKGVSK---EMVLHDPKLNR----------AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             CCHHHHHHSCTTCCH---HHHBCBTTTBT----------TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cCHhHHhhCcchhhH---HHHHhCccccc----------cCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence            5431000000 0000   00000000000          1136678999999999886543  345 4466553

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.95  E-value=2.5e-09  Score=84.11  Aligned_cols=170  Identities=18%  Similarity=0.130  Sum_probs=109.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc--------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cC
Q 035985           15 GELKIFRADLTDEASFDAPIS--------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~--------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~   76 (293)
                      ..+.++.+|+++.+.++++++        .+|+++|+|+.....      .++. ...+++|+.++..+.+++.    +.
T Consensus        55 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~-~~~~~~nl~~~~~~~~~~~~~m~~~  133 (258)
T d1ae1a_          55 LNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDY-NIIMGTNFEAAYHLSQIAYPLLKAS  133 (258)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHH-hhhhhhccccccccccccccccccc
Confidence            468889999999998876653        379999999976422      1122 2788899999988887664    33


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      + ..++|++||.....+.                        .....|+.+|...+.+.+.++.++   |+++..|.|+.
T Consensus       134 ~-~g~ii~isS~~~~~~~------------------------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~  188 (258)
T d1ae1a_         134 Q-NGNVIFLSSIAGFSAL------------------------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGV  188 (258)
T ss_dssp             T-SEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred             c-cccccccccccccccc------------------------ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCc
Confidence            4 5799999998643221                        123589999999999999988764   89999999999


Q ss_pred             ccCCCCCCCCCc--cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCc-EEEec
Q 035985          154 MSGPSLTPDIPS--SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGR-YICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~-y~~~~  223 (293)
                      +..+........  ........+...   .+.          .-+...+|+|.+++.++....  ..|. +.++|
T Consensus       189 i~T~~~~~~~~~~~~~~~~~~~~~~~---~pl----------gR~~~pediA~~v~fL~S~~s~~itG~~i~vDG  250 (258)
T d1ae1a_         189 ILTPLVETAIKKNPHQKEEIDNFIVK---TPM----------GRAGKPQEVSALIAFLCFPAASYITGQIIWADG  250 (258)
T ss_dssp             BC-------------CHHHHHHHHHH---STT----------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccCcchhhhhhhhhhhHHHHHHHHhc---CCC----------CCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCC
Confidence            976643221100  011111111110   111          126779999999999996443  3454 45544

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=98.93  E-value=5e-10  Score=88.13  Aligned_cols=117  Identities=18%  Similarity=0.189  Sum_probs=87.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~   77 (293)
                      .++..+++|++|++++.++++       ++|++||+||.....      .++. +..+++|+.++..+++++.    +.+
T Consensus        50 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~-~~~~~vNl~g~~~~~~~~~~~m~~~~  128 (255)
T d1gega_          50 GHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIV-DKVYNINVKGVIWGIQAAVEAFKKEG  128 (255)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhh-hhhhhhcccchhhhhhhhcchhhhhc
Confidence            478999999999998887754       689999999975421      1112 2688899999988887753    333


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      +-.++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..|.|+.+
T Consensus       129 ~~g~Iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i  184 (255)
T d1gega_         129 HGGKIINACSQAGHVGN------------------------PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIV  184 (255)
T ss_dssp             SCEEEEEECCGGGTSCC------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             cccccccccchhhcccC------------------------cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcc
Confidence            34679999997643221                        123589999999999999887653   899999999988


Q ss_pred             cC
Q 035985          155 SG  156 (293)
Q Consensus       155 ~G  156 (293)
                      -.
T Consensus       185 ~T  186 (255)
T d1gega_         185 KT  186 (255)
T ss_dssp             SS
T ss_pred             cC
Confidence            44

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.8e-09  Score=86.67  Aligned_cols=169  Identities=12%  Similarity=0.106  Sum_probs=109.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++..+++|++|++++.++++       ++|++||+|+.....      .++.. ..+++|+.++..+.+++..    .+
T Consensus        66 ~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~-~~~~vNl~g~~~~~~~~~~~m~~~~  144 (297)
T d1yxma1          66 ARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWH-AVLETNLTGTFYMCKAVYSSWMKEH  144 (297)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHTHHHH
T ss_pred             ceEEEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhh-hhhcccccchhhHHHHHHHhhcccc
Confidence            478999999999998887764       689999999875321      11222 6788999999988887653    23


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                       -.++|++||.. ..+.                        .....|+.+|...+.+.+.++.+.   |+++..|.|+.|
T Consensus       145 -~g~Ii~~ss~~-~~~~------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i  198 (297)
T d1yxma1         145 -GGSIVNIIVPT-KAGF------------------------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVI  198 (297)
T ss_dssp             -CEEEEEECCCC-TTCC------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSB
T ss_pred             -ccccccccccc-cccc------------------------cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcC
Confidence             35678776643 2211                        123589999999999999998765   799999999998


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ..+...........   .........++.          .-+...+|+|.+++.++....  ..| .+.++|
T Consensus       199 ~T~~~~~~~~~~~~---~~~~~~~~~~pl----------gR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDG  257 (297)
T d1yxma1         199 YSQTAVENYGSWGQ---SFFEGSFQKIPA----------KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDG  257 (297)
T ss_dssp             CCTGGGTTSGGGGG---GGGTTGGGGSTT----------SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCcchhhhccccCH---HHHHHHHhcCCC----------CCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCc
Confidence            66532111100000   000000000111          125568999999999986543  345 456654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=98.92  E-value=1.2e-09  Score=85.06  Aligned_cols=167  Identities=22%  Similarity=0.184  Sum_probs=108.1

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--C---CccccchhHHHHHHHHHHHHHhcCC-CccE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--D---DPETDMIKPAIQGVVNVLKACTKTK-TVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--~---~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~   81 (293)
                      .++.++++|++++++++++++       ++|++||+|+......  +   +.....++.|+.+...+.+++...- +-+.
T Consensus        51 ~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~  130 (241)
T d2a4ka1          51 AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGS  130 (241)
T ss_dssp             SSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCE
T ss_pred             CceEEEEecCCCHHHHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccc
Confidence            578899999999998877764       6899999998754211  1   1112678899999999888765432 1244


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~  158 (293)
                      ++++||.+ ....+                        ....|+.+|...|.+.+.++.+.   |+++..+.|+.+-.+.
T Consensus       131 i~~~ss~a-~~~~~------------------------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~  185 (241)
T d2a4ka1         131 LVLTGSVA-GLGAF------------------------GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM  185 (241)
T ss_dssp             EEEECCCT-TCCHH------------------------HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred             eeeccccc-ccccc------------------------CccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHH
Confidence            55555543 21111                        12479999999999999998775   7999999999885442


Q ss_pred             CCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          159 LTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ...    ............. ++            .-+...+|+|++++.++....  ..| ...++|
T Consensus       186 ~~~----~~~~~~~~~~~~~-p~------------~r~~~p~dva~~v~fL~S~~s~~itG~~i~vDG  236 (241)
T d2a4ka1         186 TAG----LPPWAWEQEVGAS-PL------------GRAGRPEEVAQAALFLLSEESAYITGQALYVDG  236 (241)
T ss_dssp             GTT----SCHHHHHHHHHTS-TT------------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHh----hhHhHHHHHHhCC-CC------------CCCcCHHHHHHHHHHHhcchhCCCcCceEEeCC
Confidence            211    1122222222211 11            125569999999999997543  345 445644

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=1.5e-09  Score=84.59  Aligned_cols=117  Identities=15%  Similarity=0.114  Sum_probs=87.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCCCC-----ccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSDD-----PETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      +++..+.+|++|++++.++++       .+|++||+||........     ..++++++|+.++..+.+++.    +.+ 
T Consensus        56 ~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-  134 (244)
T d1yb1a_          56 AKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-  134 (244)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-
T ss_pred             CcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-
Confidence            578999999999998887664       689999999987533211     113788899999888877653    445 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh------CCceEEEEccC
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE------NNIDLITVIPS  152 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~------~~~~~~ilR~~  152 (293)
                      -.++|++||..+..+.+                        ....|+.+|...+.+.+.++.+      .|++++.+.|+
T Consensus       135 ~G~Iv~isS~~~~~~~~------------------------~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG  190 (244)
T d1yb1a_         135 HGHIVTVASAAGHVSVP------------------------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPN  190 (244)
T ss_dssp             CEEEEEECCCC-CCCHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEET
T ss_pred             CceEEEeecchhcCCCC------------------------CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcC
Confidence            57999999987443221                        1247999999999999988764      37999999999


Q ss_pred             CccC
Q 035985          153 LMSG  156 (293)
Q Consensus       153 ~v~G  156 (293)
                      .|-.
T Consensus       191 ~v~T  194 (244)
T d1yb1a_         191 FVNT  194 (244)
T ss_dssp             HHHH
T ss_pred             CCCC
Confidence            7743

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.87  E-value=6.4e-09  Score=81.87  Aligned_cols=174  Identities=20%  Similarity=0.132  Sum_probs=109.3

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCCC-----CccccchhHHHHHHHHHHHHHhcC-CCccE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSD-----DPETDMIKPAIQGVVNVLKACTKT-KTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~   81 (293)
                      .++..+.+|++|.++++++++       .+|++||+||.......     +..+..++.|+.+...+++++... .+-.+
T Consensus        56 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~  135 (259)
T d1ja9a_          56 AQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGR  135 (259)
T ss_dssp             CCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEE
T ss_pred             CCceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCc
Confidence            478999999999998887764       68999999997642210     111267888999888888777533 11235


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~  158 (293)
                      ++.++|.......                       ......|+.+|...+.+++.++.+.   |+++..|.|+.+-.+.
T Consensus       136 ~iii~s~~~~~~~-----------------------~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~  192 (259)
T d1ja9a_         136 IILTSSIAAVMTG-----------------------IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM  192 (259)
T ss_dssp             EEEECCGGGTCCS-----------------------CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred             ccccccccccccC-----------------------CCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChh
Confidence            6666654322210                       1122489999999999999888753   8999999999885321


Q ss_pred             --------CCC-CCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCc-EEEecc
Q 035985          159 --------LTP-DIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGR-YICCAV  224 (293)
Q Consensus       159 --------~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~-y~~~~~  224 (293)
                              ... ........+...+....+             ..-+...+|++++++.++....  ..|. ..++|.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------------l~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG  257 (259)
T d1ja9a_         193 FDENSWHYAPGGYKGMPQEKIDEGLANMNP-------------LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  257 (259)
T ss_dssp             HHHHGGGTSTTCCTTCCHHHHHHHHHHTST-------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhhhhhhhhhhhcccCCHHHHHHHHHhCCC-------------CCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence                    000 011111222222222111             1225679999999999987654  3454 456554

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.85  E-value=3.9e-09  Score=82.70  Aligned_cols=167  Identities=13%  Similarity=0.098  Sum_probs=106.2

Q ss_pred             EEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-C-C-----CCccccchhHHHHHHHHHHHHHh----cCCCc
Q 035985           18 KIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-S-S-----DDPETDMIKPAIQGVVNVLKACT----KTKTV   79 (293)
Q Consensus        18 ~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-~-~-----~~~~~~~~~~n~~~~~~l~~~~~----~~~~~   79 (293)
                      .+.++|+++.++++++++       ++|++||+||.... . .     ++.. ..++.|+.++..+++++.    +.+ -
T Consensus        46 ~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~-~~~~vnl~~~~~~~~~~~~~m~~~~-~  123 (252)
T d1zmta1          46 TYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYR-GAVEALQIRPFALVNAVASQMKKRK-S  123 (252)
T ss_dssp             HCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-C
T ss_pred             cEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHH-HHHHHHhHHHHHHHHHHHHhhcccc-c
Confidence            345688999888777654       68999999986421 1 1     1122 567789988888877654    334 4


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      .++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..|.|+.|-.
T Consensus       124 G~IV~isS~~~~~~~~------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T  179 (252)
T d1zmta1         124 GHIIFITSATPFGPWK------------------------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHS  179 (252)
T ss_dssp             CEEEEECCSTTTSCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCC
T ss_pred             ceeecccccccccccc------------------------cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcC
Confidence            6899999986432211                        22489999999999999987664   89999999999876


Q ss_pred             CCCCCCCCcc----HHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          157 PSLTPDIPSS----VALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       157 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      +.........    .......+...   ++.          .-+...+|+|.+++.++....  ..| .+.++|
T Consensus       180 ~~~~~~~~~~~~~~~~e~~~~~~~~---~pl----------~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdG  240 (252)
T d1zmta1         180 EDSPYFYPTEPWKTNPEHVAHVKKV---TAL----------QRLGTQKELGELVAFLASGSCDYLTGQVFWLAG  240 (252)
T ss_dssp             BTCCSSCBHHHHTTCHHHHHHHHHH---SSS----------SSCBCHHHHHHHHHHHHTTSCGGGTTCEEEEST
T ss_pred             cchhhhhhcccccCCHHHHHHHHhc---CCC----------CCCcCHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence            5432211000    01111111110   111          115669999999999987543  344 446654

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.84  E-value=4e-08  Score=76.70  Aligned_cols=134  Identities=16%  Similarity=0.205  Sum_probs=91.0

Q ss_pred             cccccchhccc-CCCCeEEEecCCCCCcchhhhhc---------CCCEEEEecccCCCCC---C-Cc--cccchhHHHHH
Q 035985            2 QKKISPLIALQ-ELGELKIFRADLTDEASFDAPIS---------RSDIVFHVATPVNFSS---D-DP--ETDMIKPAIQG   65 (293)
Q Consensus         2 ~~~~~~l~~~~-~~~~v~~v~~Dl~d~~~~~~~~~---------~~d~Vih~a~~~~~~~---~-~~--~~~~~~~n~~~   65 (293)
                      +++++.++++. ..+++.++.+|++|+++++++++         .+|++||.||......   . +.  .+..+++|+.+
T Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g  118 (248)
T d1snya_          39 REQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVV  118 (248)
T ss_dssp             TTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhcccc
Confidence            34455555432 22689999999999998876643         4899999999753221   1 11  12578899999


Q ss_pred             HHHHHHHHhc---------------CCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHH
Q 035985           66 VVNVLKACTK---------------TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTL  130 (293)
Q Consensus        66 ~~~l~~~~~~---------------~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~  130 (293)
                      +..+++++..               .+ -.++|.+||........                     +......|+.+|..
T Consensus       119 ~~~~~~~~~p~l~~~~~~~~~~~~~~~-~g~ii~i~S~~g~~~~~---------------------~~~~~~~Y~aSKaa  176 (248)
T d1snya_         119 PIMLAKACLPLLKKAAKANESQPMGVG-RAAIINMSSILGSIQGN---------------------TDGGMYAYRTSKSA  176 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCSSTT-TCEEEEECCGGGCSTTC---------------------CSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcccccccccc-ccccccccccccccCCC---------------------CCCChHHHHHHHHH
Confidence            8888776531               12 36899999964221110                     11223589999999


Q ss_pred             HHHHHHHHHHhC---CceEEEEccCCccCC
Q 035985          131 AERAACKFAQEN---NIDLITVIPSLMSGP  157 (293)
Q Consensus       131 ~E~~~~~~~~~~---~~~~~ilR~~~v~G~  157 (293)
                      ...+.+.++.+.   |+++..+.|+.|--+
T Consensus       177 l~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         177 LNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             HHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            999988877553   799999999988544

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.81  E-value=1e-08  Score=81.35  Aligned_cols=173  Identities=17%  Similarity=0.129  Sum_probs=109.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC--------CCccccchhHHHHHHHHHHHHHh----c
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS--------DDPETDMIKPAIQGVVNVLKACT----K   75 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~   75 (293)
                      .++..+.+|++|+++++++++       .+|++||+||......        +++ +..++.|+.++..+.+++.    +
T Consensus        56 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~-~~~~~vNl~~~~~~~~~~~~~m~~  134 (274)
T d1xhla_          56 EKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELY-QKTFKLNFQAVIEMTQKTKEHLIK  134 (274)
T ss_dssp             GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHH-HHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHH-HHHHhhcccccccccccccccccc
Confidence            368999999999998877764       6899999998643111        112 2678889999988887764    3


Q ss_pred             CCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccC
Q 035985           76 TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPS  152 (293)
Q Consensus        76 ~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~  152 (293)
                      .+ -.+++++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..|.|+
T Consensus       135 ~~-~g~ii~~ss~~~~~~~------------------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG  189 (274)
T d1xhla_         135 TK-GEIVNVSSIVAGPQAH------------------------SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPG  189 (274)
T ss_dssp             TT-CEEEEECCGGGSSSCC------------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             cc-cccccchhhhhccccC------------------------CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccC
Confidence            33 4678887775422211                        123489999999999998887654   8999999999


Q ss_pred             CccCCCCCCCCC-c-cHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC---CCCC-cEEEec
Q 035985          153 LMSGPSLTPDIP-S-SVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE---SASG-RYICCA  223 (293)
Q Consensus       153 ~v~G~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~---~~~~-~y~~~~  223 (293)
                      .|-.+....... . ........+......++.          .-+...+|+|++++.++..+   ...| .+.++|
T Consensus       190 ~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl----------gR~g~pediA~~v~fL~S~d~s~~itG~~i~vDG  256 (274)
T d1xhla_         190 AVATGFMGAMGLPETASDKLYSFIGSRKECIPV----------GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADG  256 (274)
T ss_dssp             CBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT----------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             CCcCchhhhhcccchhhHHHHHHHHHHHcCCCC----------CCCcCHHHHHHHHHHHcCCccccCccCcEEEeCc
Confidence            986542111000 0 011111211111111221          11456999999999888632   2445 446644

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.3e-08  Score=79.82  Aligned_cols=160  Identities=18%  Similarity=0.159  Sum_probs=101.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-----CCccccchhHHHHHHHHHHHHHh----cCC-
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-----DDPETDMIKPAIQGVVNVLKACT----KTK-   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~----~~~-   77 (293)
                      .++.++++|+++++++.++++       ++|++||+|+......     .+..+..++.|+.+...+.+++.    +.+ 
T Consensus        61 ~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~  140 (257)
T d1xg5a_          61 GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV  140 (257)
T ss_dssp             SEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC
T ss_pred             ceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhcc
Confidence            368889999999998877654       6899999999764211     11113678889888888766653    332 


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-----CCceEEEEccC
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-----NNIDLITVIPS  152 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-----~~~~~~ilR~~  152 (293)
                      .-.++|++||.+.....+                      ......|+.+|...+.+.+.++.+     +++++..+-|+
T Consensus       141 ~~g~Ii~isS~~~~~~~p----------------------~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG  198 (257)
T d1xg5a_         141 DDGHIININSMSGHRVLP----------------------LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPG  198 (257)
T ss_dssp             CSCEEEEECCGGGTSCCS----------------------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEES
T ss_pred             CCCceEEEechHhcCCCC----------------------CcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCC
Confidence            136899999976322111                      111246999999999999888753     47999999998


Q ss_pred             CccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          153 LMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       153 ~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                      .+=.+............+...       ++          ..-+...+|+|++++.++..+
T Consensus       199 ~i~t~~~~~~~~~~~~~~~~~-------~~----------~~r~~~pedvA~~v~fL~s~~  242 (257)
T d1xg5a_         199 VVETQFAFKLHDKDPEKAAAT-------YE----------QMKCLKPEDVAEAVIYVLSTP  242 (257)
T ss_dssp             CBCSSHHHHHTTTCHHHHHHH-------HC-------------CBCHHHHHHHHHHHHHSC
T ss_pred             CCCChhhhhcChhhHHHHHhc-------CC----------CCCCcCHHHHHHHHHHHhCCh
Confidence            664321000000001111010       11          123567999999999988765

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.79  E-value=1.4e-08  Score=80.13  Aligned_cols=170  Identities=15%  Similarity=0.171  Sum_probs=103.0

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC----------CCCccccchhHHHHHHHHHHHHHhcC-
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS----------SDDPETDMIKPAIQGVVNVLKACTKT-   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~-   76 (293)
                      .++..+++|++|+++++++++       ++|++||+||.....          .+++. ..++.|+.++..+.+++... 
T Consensus        57 ~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~-~~~~vNl~~~~~~~~~~~p~m  135 (264)
T d1spxa_          57 QNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYD-ATLNLNLRSVIALTKKAVPHL  135 (264)
T ss_dssp             GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHH-HHHHHHTHHHHHHHHHHHHHH
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHH-HHHHHhHHHHHHHHhhhCCcc
Confidence            468999999999998887764       689999999864211          01122 67888999998888776532 


Q ss_pred             --CCccEEEEecccch-hcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEc
Q 035985           77 --KTVKRVILTSSAAA-VSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVI  150 (293)
Q Consensus        77 --~~~~~~v~~SS~~~-~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR  150 (293)
                        + -.++|.++|... ..+.                        .....|+.+|...+.+.+.++.+.   |+++..|.
T Consensus       136 ~~~-~g~iI~~~S~~~~~~~~------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~  190 (264)
T d1spxa_         136 SST-KGEIVNISSIASGLHAT------------------------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSIS  190 (264)
T ss_dssp             HHH-TCEEEEECCTTSSSSCC------------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred             ccc-cCcceeeeeeccccccC------------------------CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEe
Confidence              1 135666555431 1111                        123479999999999999887654   89999999


Q ss_pred             cCCccCCCCCCCC-----CccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC---CCCC-cEEE
Q 035985          151 PSLMSGPSLTPDI-----PSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE---SASG-RYIC  221 (293)
Q Consensus       151 ~~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~---~~~~-~y~~  221 (293)
                      |+.|-.+......     ..........+..   .++.          .-+...+|+|++++.++..+   ...| .+.+
T Consensus       191 PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---~~Pl----------~R~g~pedvA~~v~fL~S~~~s~~itG~~i~v  257 (264)
T d1spxa_         191 PGLVATGFGSAMGMPEETSKKFYSTMATMKE---CVPA----------GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVV  257 (264)
T ss_dssp             ECCBCCCC--------------HHHHHHHHH---HCTT----------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEE
T ss_pred             eCCCCCcchhccCCcHHHHHHHHHHHHHHHh---cCCC----------CCCcCHHHHHHHHHHHhCCcccCCccCceEEe
Confidence            9988654322110     0000001111110   0111          12556899999999988643   2345 4566


Q ss_pred             ec
Q 035985          222 CA  223 (293)
Q Consensus       222 ~~  223 (293)
                      +|
T Consensus       258 DG  259 (264)
T d1spxa_         258 DG  259 (264)
T ss_dssp             ST
T ss_pred             CC
Confidence            44

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.78  E-value=1.5e-08  Score=79.60  Aligned_cols=170  Identities=15%  Similarity=0.078  Sum_probs=106.8

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCC-----C-CCCc---cccchhHHHHHHHHHHHHHhcCC-
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNF-----S-SDDP---ETDMIKPAIQGVVNVLKACTKTK-   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~-----~-~~~~---~~~~~~~n~~~~~~l~~~~~~~~-   77 (293)
                      .+...+++|++|+++++++++       ++|++||+|+....     . .+..   ....++.|+.++..+++++...- 
T Consensus        58 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~  137 (256)
T d1ulua_          58 GGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLR  137 (256)
T ss_dssp             TCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE
T ss_pred             CcccccccccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhc
Confidence            467889999999998887764       68999999986431     0 0111   11467788999988888776431 


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      +-.++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+++..+.|+.+
T Consensus       138 ~~G~Iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i  193 (256)
T d1ulua_         138 EGGGIVTLTYYASEKVV------------------------PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPV  193 (256)
T ss_dssp             EEEEEEEEECGGGTSBC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC
T ss_pred             cCCEEEEEeehHhcCCC------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeecccee
Confidence            12579999997643221                        123589999999999999988754   899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ..+......  ........+...   ++.          .-+...+|+|++++.++....  ..| .+.++|
T Consensus       194 ~t~~~~~~~--~~~~~~~~~~~~---~pl----------~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDG  250 (256)
T d1ulua_         194 RTVAARSIP--GFTKMYDRVAQT---APL----------RRNITQEEVGNLGLFLLSPLASGITGEVVYVDA  250 (256)
T ss_dssp             ------------CHHHHHHHHHH---STT----------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             eeccccchh--hhHHHHHHHHhc---CCC----------CCCcCHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence            765432211  011111111111   111          114568999999999887543  345 445643

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.77  E-value=3.3e-08  Score=78.22  Aligned_cols=174  Identities=17%  Similarity=0.160  Sum_probs=105.6

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC------CCc---cccchhHHHHHHHHHHHHHhcC--
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS------DDP---ETDMIKPAIQGVVNVLKACTKT--   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~------~~~---~~~~~~~n~~~~~~l~~~~~~~--   76 (293)
                      .++..+++|++|+++++++++       ++|++||+||......      +..   ....++.|+.++..+.+++...  
T Consensus        57 ~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~  136 (272)
T d1xkqa_          57 KQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLV  136 (272)
T ss_dssp             GGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccc
Confidence            468999999999998887764       6899999999764211      110   1256778999988888776432  


Q ss_pred             -CCccEEEEecc-cchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEcc
Q 035985           77 -KTVKRVILTSS-AAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIP  151 (293)
Q Consensus        77 -~~~~~~v~~SS-~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~  151 (293)
                       + -..+|+++| .+...+.                        .-...|+.+|...+.+.+.++.+   +|+++..|.|
T Consensus       137 ~~-~g~iI~~~Ss~a~~~~~------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~P  191 (272)
T d1xkqa_         137 AS-KGEIVNVSSIVAGPQAQ------------------------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSP  191 (272)
T ss_dssp             HH-TCEEEEECCGGGSSSCC------------------------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             cc-CCccccccchhccccCC------------------------CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEee
Confidence             1 134555554 3312111                        12347999999999999988865   4899999999


Q ss_pred             CCccCCCCCCCCC--ccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccC---CCCC-cEEEec
Q 035985          152 SLMSGPSLTPDIP--SSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKE---SASG-RYICCA  223 (293)
Q Consensus       152 ~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~---~~~~-~y~~~~  223 (293)
                      +.|-.+.......  ................++.          .-+...+|+|++++.++..+   ...| .+.++|
T Consensus       192 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl----------gR~g~pediA~~v~fL~S~~as~~iTG~~i~vDG  259 (272)
T d1xkqa_         192 GMVETGFTNAMGMPDQASQKFYNFMASHKECIPI----------GAAGKPEHIANIILFLADRNLSFYILGQSIVADG  259 (272)
T ss_dssp             CCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT----------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             CCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC----------CCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCc
Confidence            9885542111000  0011111111111111111          12566899999999988632   2445 446644

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.77  E-value=9.5e-09  Score=81.57  Aligned_cols=117  Identities=18%  Similarity=0.172  Sum_probs=85.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-------CC---ccccchhHHHHHHHHHHHHHh---
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-------DD---PETDMIKPAIQGVVNVLKACT---   74 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-------~~---~~~~~~~~n~~~~~~l~~~~~---   74 (293)
                      .++..+.+|++++++++++++       .+|++||+||......       +.   ..+..+++|+.++..+.+++.   
T Consensus        51 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m  130 (276)
T d1bdba_          51 DNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPAL  130 (276)
T ss_dssp             GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHH
Confidence            478999999999998877753       6899999999653211       11   012678899999888877664   


Q ss_pred             -cCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--CceEEEEcc
Q 035985           75 -KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--NIDLITVIP  151 (293)
Q Consensus        75 -~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--~~~~~ilR~  151 (293)
                       +.+  .++|++||.....+.+                        ....|+.+|...+.+.+.++.+.  ++++..|.|
T Consensus       131 ~~~~--g~iI~i~S~~~~~~~~------------------------~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~P  184 (276)
T d1bdba_         131 VASR--GNVIFTISNAGFYPNG------------------------GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGS  184 (276)
T ss_dssp             HHHT--CEEEEECCGGGTSTTS------------------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             HhcC--CCceeeeechhccCCC------------------------CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCC
Confidence             333  4788888865333211                        22479999999999999888764  589999999


Q ss_pred             CCccCC
Q 035985          152 SLMSGP  157 (293)
Q Consensus       152 ~~v~G~  157 (293)
                      +.|-.+
T Consensus       185 G~i~T~  190 (276)
T d1bdba_         185 GGINSD  190 (276)
T ss_dssp             CCCCSC
T ss_pred             CCEecC
Confidence            988654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.73  E-value=5e-08  Score=76.22  Aligned_cols=136  Identities=15%  Similarity=0.179  Sum_probs=90.2

Q ss_pred             cccccchhcccCCCCeEEEecCCCCCcchhhhhc---------CCCEEEEecccCCC-C-CCC-c---cccchhHHHHHH
Q 035985            2 QKKISPLIALQELGELKIFRADLTDEASFDAPIS---------RSDIVFHVATPVNF-S-SDD-P---ETDMIKPAIQGV   66 (293)
Q Consensus         2 ~~~~~~l~~~~~~~~v~~v~~Dl~d~~~~~~~~~---------~~d~Vih~a~~~~~-~-~~~-~---~~~~~~~n~~~~   66 (293)
                      +++++.+++..+ .++.++++|++|.++++++++         ++|++||+||.... . ..+ .   .+..+++|+.++
T Consensus        39 ~~~~~~l~~~~~-~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~  117 (250)
T d1yo6a1          39 VEKATELKSIKD-SRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSV  117 (250)
T ss_dssp             GGGCHHHHTCCC-TTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHH
T ss_pred             HHHHHHHHHhhC-CceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhH
Confidence            345555555433 579999999999988776653         38999999997531 1 111 1   126788999999


Q ss_pred             HHHHHHHhc----C----------CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHH
Q 035985           67 VNVLKACTK----T----------KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAE  132 (293)
Q Consensus        67 ~~l~~~~~~----~----------~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E  132 (293)
                      ..+.+++..    .          ....+++.+|+.........       ...          ...+...|+.||....
T Consensus       118 ~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~-------~~~----------~~~~~~aY~aSKaal~  180 (250)
T d1yo6a1         118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT-------SGS----------AQFPVLAYRMSKAAIN  180 (250)
T ss_dssp             HHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC-------STT----------SSSCBHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCc-------ccc----------cchhHHHHHHHHHHHH
Confidence            888877641    1          01246777777542221111       000          2234457999999999


Q ss_pred             HHHHHHHHhC---CceEEEEccCCcc
Q 035985          133 RAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus       133 ~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      .+.+.++.+.   |+++..+.|+.|-
T Consensus       181 ~l~~~la~el~~~gI~v~~i~PG~v~  206 (250)
T d1yo6a1         181 MFGRTLAVDLKDDNVLVVNFCPGWVQ  206 (250)
T ss_dssp             HHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred             HHHHHHHHHhcccCeEEEEEecCCCC
Confidence            9999988764   7999999999773

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=98.72  E-value=2.8e-08  Score=78.09  Aligned_cols=175  Identities=16%  Similarity=0.164  Sum_probs=109.4

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TK   77 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~   77 (293)
                      .++..+++|++|+++++++++       .+|++||+|+.....      .++.. ..++.|+.++..+.+++..    .+
T Consensus        59 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~-~~~~~N~~g~~~~~~~~~~~m~~~~  137 (260)
T d1h5qa_          59 VKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFA-FVYDVNVFGVFNTCRAVAKLWLQKQ  137 (260)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEccCCCHHHHHHHHHHHHHHhCCCcEecccccccccCCHHHhcccccc-ccccccccchhhhhhhhcccccccc
Confidence            478999999999998887764       689999999875321      11222 6788999998887765532    23


Q ss_pred             CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCc
Q 035985           78 TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLITVIPSLM  154 (293)
Q Consensus        78 ~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v  154 (293)
                      .-.+++..||..........     +.            .......|+.+|...+.+.+.++.+   +|+++..|.|+.|
T Consensus       138 ~~g~i~~~~s~~~~~~~~~~-----~~------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i  200 (260)
T d1h5qa_         138 QKGSIVVTSSMSSQIINQSS-----LN------------GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYV  200 (260)
T ss_dssp             CCEEEEEECCGGGTSCCEEE-----TT------------EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred             cceEEEEeeccccccccccc-----cc------------cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcc
Confidence            24567776765422111100     00            1112358999999999999988765   3899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      -.+....    ............   ++.          .-+...+|+|++++.++....  ..| .+.++|.
T Consensus       201 ~T~~~~~----~~~~~~~~~~~~---~pl----------~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  256 (260)
T d1h5qa_         201 NTDQTAH----MDKKIRDHQASN---IPL----------NRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  256 (260)
T ss_dssp             CCGGGGG----SCHHHHHHHHHT---CTT----------SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             cCcchhc----cCHHHHHHHHhc---CCC----------CCCcCHHHHHHHHHHHhcchhCCCcCceEEECCC
Confidence            5442211    111222222111   111          125668999999999886543  345 4466553

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.69  E-value=1.6e-07  Score=74.17  Aligned_cols=119  Identities=19%  Similarity=0.168  Sum_probs=85.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-----CCccccchhHHHHHHHHHHHHHhcC-CCccE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-----DDPETDMIKPAIQGVVNVLKACTKT-KTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~   81 (293)
                      .++..+++|++|++++.++++       .+|++||.++......     .......++.|+.++..+++++... .+-.+
T Consensus        68 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~  147 (272)
T d1g0oa_          68 SDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGR  147 (272)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCE
T ss_pred             CceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccc
Confidence            468999999999988877764       6899999998764221     1111267788999998888877632 11246


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSG  156 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G  156 (293)
                      +++++|......                       +......|+.+|...+.+++.++.++   |+++..|.|+.+-.
T Consensus       148 ~i~i~s~~~~~~-----------------------~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T  202 (272)
T d1g0oa_         148 LILMGSITGQAK-----------------------AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKT  202 (272)
T ss_dssp             EEEECCGGGTCS-----------------------SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSS
T ss_pred             cccccccccccc-----------------------cccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCC
Confidence            777777542211                       11233579999999999999887753   89999999998854

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.69  E-value=8.3e-08  Score=74.09  Aligned_cols=167  Identities=11%  Similarity=0.141  Sum_probs=105.5

Q ss_pred             CeEEEecCCCCC-cchhhhhcCCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCCCccEEEE
Q 035985           16 ELKIFRADLTDE-ASFDAPISRSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTKTVKRVIL   84 (293)
Q Consensus        16 ~v~~v~~Dl~d~-~~~~~~~~~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~   84 (293)
                      +.+++.+|+++. +.+.+.+.++|++||+||.....      .++.. ..++.|+.++..+.+++.    +.+ -.++|+
T Consensus        45 ~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~  122 (234)
T d1o5ia_          45 GHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFK-EAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVA  122 (234)
T ss_dssp             CSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHH-HHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEE
T ss_pred             CCcEEEcchHHHHHHHHHHhCCCcEEEecccccCCcchhhhhhHHHH-HHhhhhhhhhhhhhhcccccccccc-cccccc
Confidence            457788999864 23444456899999999865321      11122 667889988887777663    334 468999


Q ss_pred             ecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCCCCC
Q 035985           85 TSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPSLTP  161 (293)
Q Consensus        85 ~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~~~~  161 (293)
                      +||.....+                        ......|+.+|...+.+.+.++.+.   |+++..|.|+.+-.+....
T Consensus       123 i~S~~~~~~------------------------~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~  178 (234)
T d1o5ia_         123 ITSFSVISP------------------------IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE  178 (234)
T ss_dssp             ECCGGGTSC------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH
T ss_pred             ccccccccc------------------------ccccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhh
Confidence            998753221                        1233589999999999998887654   8999999999886543111


Q ss_pred             CCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          162 DIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ...   ......+... .  +          ..-+...+|+|.+++.++....  ..| ++.++|.
T Consensus       179 ~~~---~~~~~~~~~~-~--p----------l~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG  228 (234)
T d1o5ia_         179 LLS---EEKKKQVESQ-I--P----------MRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGG  228 (234)
T ss_dssp             HSC---HHHHHHHHTT-S--T----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hcC---HHHHHHHHhc-C--C----------CCCCcCHHHHHHHHHHHhChhhcCCcCcEEEECcc
Confidence            000   1111211111 1  1          1225679999999999886543  345 4456543

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=4.1e-08  Score=76.37  Aligned_cols=171  Identities=20%  Similarity=0.185  Sum_probs=109.3

Q ss_pred             CCeEEEecCCCCCcchhhhh---cCCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHhc----CCCccE
Q 035985           15 GELKIFRADLTDEASFDAPI---SRSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACTK----TKTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~---~~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~   81 (293)
                      .++.....|+.+.+.++...   .++|++||+||.....      .++. ...+++|+.++..+.+++..    .+ ..+
T Consensus        50 ~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~-~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~  127 (245)
T d2ag5a1          50 PGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDW-DFSMNLNVRSMYLMIKAFLPKMLAQK-SGN  127 (245)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEE
T ss_pred             cCCceeeeeccccccccccccccccceeEEecccccCCCChhhCCHHHH-HHHHHHhhccchhHHHhhCcccccCC-Cce
Confidence            57888999998876665554   4799999999976422      1112 26788899999888876653    23 468


Q ss_pred             EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCccCCC
Q 035985           82 VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMSGPS  158 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~G~~  158 (293)
                      +|++||.....  .                     +......|+.+|...+.+++.++.+.   |+++..|.|+.|-.+.
T Consensus       128 Ii~isS~~~~~--~---------------------~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~  184 (245)
T d2ag5a1         128 IINMSSVASSV--K---------------------GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS  184 (245)
T ss_dssp             EEEECCSBTTT--B---------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred             eeeeechhhcc--C---------------------CccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechh
Confidence            99999864211  0                     11234589999999999999988764   8999999999886542


Q ss_pred             CCCC--CCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCc-EEEec
Q 035985          159 LTPD--IPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGR-YICCA  223 (293)
Q Consensus       159 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~-y~~~~  223 (293)
                      ....  ...........+...   .+          ..-+...+|+++++..++....  ..|. +.++|
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~---~p----------l~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDG  241 (245)
T d2ag5a1         185 LQERIQARGNPEEARNDFLKR---QK----------TGRFATAEEIAMLCVYLASDESAYVTGNPVIIDG  241 (245)
T ss_dssp             HHHHHHHSSSHHHHHHHHHHT---CT----------TSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             hHhhhhhhhhhHHHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCC
Confidence            1100  000001111111111   11          1226779999999999997543  3454 45644

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.60  E-value=1.8e-07  Score=73.39  Aligned_cols=119  Identities=17%  Similarity=0.145  Sum_probs=87.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-----------CCCEEEEecccCCCCCC------C--ccccchhHHHHHHHHHHHHHhc
Q 035985           15 GELKIFRADLTDEASFDAPIS-----------RSDIVFHVATPVNFSSD------D--PETDMIKPAIQGVVNVLKACTK   75 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-----------~~d~Vih~a~~~~~~~~------~--~~~~~~~~n~~~~~~l~~~~~~   75 (293)
                      .++..+++|++++++++++++           ..|+++|.||.......      +  ..+.+++.|+.++..+.+++..
T Consensus        60 ~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~  139 (259)
T d1oaaa_          60 LKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLN  139 (259)
T ss_dssp             SEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ceEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHH
Confidence            468899999999998877752           35789999986432111      1  1125788999999999888753


Q ss_pred             C----C-CccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-CceEEEE
Q 035985           76 T----K-TVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-NIDLITV  149 (293)
Q Consensus        76 ~----~-~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-~~~~~il  149 (293)
                      .    + ...++|++||.....+.                        .....|+.+|...+.+.+.++.+. |+++..+
T Consensus       140 ~m~~~~~~~g~Iv~isS~~~~~~~------------------------~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v  195 (259)
T d1oaaa_         140 AFQDSPGLSKTVVNISSLCALQPY------------------------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSY  195 (259)
T ss_dssp             TSCCCTTCEEEEEEECCGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred             HHHhcCCCcccccccccccccCCC------------------------ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            3    1 13589999997643321                        123589999999999999987664 8999999


Q ss_pred             ccCCccCC
Q 035985          150 IPSLMSGP  157 (293)
Q Consensus       150 R~~~v~G~  157 (293)
                      .|+.|-.+
T Consensus       196 ~PG~i~T~  203 (259)
T d1oaaa_         196 APGPLDND  203 (259)
T ss_dssp             ECCSBSSH
T ss_pred             EcCCCCCH
Confidence            99988654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=98.54  E-value=7.7e-07  Score=71.02  Aligned_cols=171  Identities=13%  Similarity=0.111  Sum_probs=103.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCCCC-----ccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSDD-----PETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      ..+..+++|+++.+++.+++.       ++|++||+|+........     .....+..|......+...+.    ....
T Consensus        75 ~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  154 (294)
T d1w6ua_          75 NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK  154 (294)
T ss_dssp             SCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CceEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccc
Confidence            468899999999998876653       689999999976432111     011455667666655544332    2222


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCcc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLMS  155 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v~  155 (293)
                      ...++.+||.....+.                        .....|+.+|...+.+++.++.+.   |+++..|.|+.|-
T Consensus       155 ~~~i~~~ss~~~~~~~------------------------~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~  210 (294)
T d1w6ua_         155 GAAFLSITTIYAETGS------------------------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIK  210 (294)
T ss_dssp             CEEEEEECCTHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred             cccccccccchhhhcc------------------------cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccc
Confidence            4567777776433211                        123479999999999999888654   8999999999997


Q ss_pred             CCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          156 GPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      .+......... ...........   +.          .-+...+|+|.+++.++....  ..| +..++|
T Consensus       211 T~~~~~~~~~~-~~~~~~~~~~~---pl----------~R~~~pediA~~v~fL~sd~s~~itG~~i~vDG  267 (294)
T d1w6ua_         211 TKGAFSRLDPT-GTFEKEMIGRI---PC----------GRLGTVEELANLAAFLCSDYASWINGAVIKFDG  267 (294)
T ss_dssp             C------CCTT-SHHHHHHHTTC---TT----------SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             cchhhhccCCc-HHHHHHHhhcC---CC----------CCCCCHHHHHHHHHHHhCchhcCCCCcEEEECC
Confidence            65432211111 01111111111   11          124568999999999987543  345 446644

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.53  E-value=9.2e-08  Score=76.62  Aligned_cols=113  Identities=22%  Similarity=0.166  Sum_probs=84.7

Q ss_pred             CeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCC------CCCccccchhHHHHHHHHHHHHHh----cCCC
Q 035985           16 ELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFS------SDDPETDMIKPAIQGVVNVLKACT----KTKT   78 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~   78 (293)
                      ....+.+|+.|.++++++++       ++|++||+||.....      .++. +..+++|+.++..+++++.    +.+ 
T Consensus        63 ~~~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~-~~~~~vNl~g~~~~~~~~~p~m~~~~-  140 (302)
T d1gz6a_          63 RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDW-DIIQRVHLRGSFQVTRAAWDHMKKQN-  140 (302)
T ss_dssp             TTCEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             cccccccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHH-hhhhceeehhhHHHHHHhHHHHHhCC-
Confidence            34566788888887766553       699999999976422      1122 2788899999988888764    334 


Q ss_pred             ccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           79 VKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        79 ~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      -.++|++||.....+.+                        ....|+.+|...+.+.+.++.+.   |+++..|-|+.+
T Consensus       141 ~G~IV~isS~~~~~~~~------------------------~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~  195 (302)
T d1gz6a_         141 YGRIIMTASASGIYGNF------------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  195 (302)
T ss_dssp             CEEEEEECCHHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             CcEEEEeCChhhcCCCC------------------------CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCC
Confidence            46999999987655432                        22489999999999999988764   899999999865

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=1.3e-07  Score=74.87  Aligned_cols=142  Identities=17%  Similarity=0.090  Sum_probs=88.2

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCC-CC-c---cccchhHHHHHHHHHHHHHhcC-CCccE
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSS-DD-P---ETDMIKPAIQGVVNVLKACTKT-KTVKR   81 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~-~~-~---~~~~~~~n~~~~~~l~~~~~~~-~~~~~   81 (293)
                      .++.++++|++|.++++++++       .+|++||.||...... .. .   .+..+++|+.++..+++++... .+-.+
T Consensus        53 ~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~  132 (275)
T d1wmaa1          53 LSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGR  132 (275)
T ss_dssp             CCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEE
T ss_pred             CcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            578999999999998877653       6899999999764221 11 1   1257889999999999888643 11258


Q ss_pred             EEEecccchhcccccCCCC-------ccccCCCCC----------chhhhccCCCCCchhHHHHHHHHHHHHHHHHh---
Q 035985           82 VILTSSAAAVSINAQNVTG-------LVMDEKNWT----------DVEFLSSEKPPTWGYAASKTLAERAACKFAQE---  141 (293)
Q Consensus        82 ~v~~SS~~~~~~~~~~~~~-------~~~~E~~~~----------~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---  141 (293)
                      +|++||.....+.......       ....+....          ..........+...|+.+|.....+.+.++.+   
T Consensus       133 ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~  212 (275)
T d1wmaa1         133 VVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSE  212 (275)
T ss_dssp             EEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccceeccccccchhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999997644332211000       000000000          00000002235568999999988777665433   


Q ss_pred             ----CCceEEEEccCCccC
Q 035985          142 ----NNIDLITVIPSLMSG  156 (293)
Q Consensus       142 ----~~~~~~ilR~~~v~G  156 (293)
                          .++.+..+.|+.|-.
T Consensus       213 ~~~~~~I~vn~v~PG~v~T  231 (275)
T d1wmaa1         213 QRKGDKILLNACCPGWVRT  231 (275)
T ss_dssp             HCTTSCCEEEEEECCSBCS
T ss_pred             HhCCCCeEEEEEecccccC
Confidence                279999999998854

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=4.2e-06  Score=64.84  Aligned_cols=163  Identities=18%  Similarity=0.198  Sum_probs=100.9

Q ss_pred             CCeEEEecCCCCCcchhhhh-------cCCCEEEEecccCCCCC----C-------CccccchhHHHHHHHHHHHHHhcC
Q 035985           15 GELKIFRADLTDEASFDAPI-------SRSDIVFHVATPVNFSS----D-------DPETDMIKPAIQGVVNVLKACTKT   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~~~----~-------~~~~~~~~~n~~~~~~l~~~~~~~   76 (293)
                      .+......|+.+...+++..       ...|.+++.++......    .       +.....++.|+.++..+.+++...
T Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~  130 (248)
T d2o23a1          51 NNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGE  130 (248)
T ss_dssp             TTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCcccccccccccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHH
Confidence            36778888888877655443       25788888876542110    0       111267788999999988887432


Q ss_pred             ---------CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---Cc
Q 035985           77 ---------KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NI  144 (293)
Q Consensus        77 ---------~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~  144 (293)
                               .+-.++|++||.....+.                        .....|+.+|...+.+.+.++.+.   |+
T Consensus       131 ~~~~~~~~~~~~G~Ii~isS~~~~~~~------------------------~~~~~Y~asKaal~~lt~~la~e~~~~gI  186 (248)
T d2o23a1         131 MGQNEPDQGGQRGVIINTASVAAFEGQ------------------------VGQAAYSASKGGIVGMTLPIARDLAPIGI  186 (248)
T ss_dssp             HTTSCCCTTSCCEEEEEECCTHHHHCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             HHHhhhhccCCceEEEEecchhhccCC------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCc
Confidence                     113489999998754322                        123589999999999999988764   89


Q ss_pred             eEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCC
Q 035985          145 DLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASG  217 (293)
Q Consensus       145 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~  217 (293)
                      ++..|.|+.+-.+....    ........+...   ++.         ..-+...+|+|++++.++++....|
T Consensus       187 rvN~I~PG~i~T~~~~~----~~~~~~~~~~~~---~pl---------~~R~g~peevA~~v~fL~s~~~itG  243 (248)
T d2o23a1         187 RVMTIAPGLFGTPLLTS----LPEKVCNFLASQ---VPF---------PSRLGDPAEYAHLVQAIIENPFLNG  243 (248)
T ss_dssp             EEEEEEECCBCCC--------------CHHHHT---CSS---------SCSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred             ceeeeccCceecchhhc----CCHHHHHHHHhc---CCC---------CCCCcCHHHHHHHHHHHHhCCCCCc
Confidence            99999999886543221    111111111111   110         0114568999999998887543333

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=98.27  E-value=1.1e-05  Score=63.79  Aligned_cols=162  Identities=17%  Similarity=0.020  Sum_probs=96.0

Q ss_pred             EecCCCCCcchhhhh-------cCCCEEEEecccCCCCCC------Ccc-------------ccchhHHHHHHHHHHHHH
Q 035985           20 FRADLTDEASFDAPI-------SRSDIVFHVATPVNFSSD------DPE-------------TDMIKPAIQGVVNVLKAC   73 (293)
Q Consensus        20 v~~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~~~~------~~~-------------~~~~~~n~~~~~~l~~~~   73 (293)
                      ..+|+++.+.+++++       .++|++||+||.......      +..             ...+..|+.+...+.+++
T Consensus        75 ~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  154 (284)
T d1e7wa_          75 GSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  154 (284)
T ss_dssp             -CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccc
Confidence            445577777676665       369999999997642110      000             014667888887777764


Q ss_pred             hc---------CCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC--
Q 035985           74 TK---------TKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN--  142 (293)
Q Consensus        74 ~~---------~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~--  142 (293)
                      .+         .+...++|.++|.....                        +......|+.+|...+.+.+.++.+.  
T Consensus       155 ~~~~~~~~~~~~~~~~~ii~~~s~~~~~------------------------~~~~~~~Y~asKaal~~lt~~lA~el~~  210 (284)
T d1e7wa_         155 AHRVAGTPAKHRGTNYSIINMVDAMTNQ------------------------PLLGYTIYTMAKGALEGLTRSAALELAP  210 (284)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTTS------------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             cchhhhhHHHhcCCCCcccccccccccC------------------------CccceeeeccccccchhhhHHHHHHhCC
Confidence            32         22234677777764221                        11223589999999999999988654  


Q ss_pred             -CceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-c
Q 035985          143 -NIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-R  218 (293)
Q Consensus       143 -~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~  218 (293)
                       |+++..|.|+.+-....      .............+ +           ..-+...+|+|++++.++....  ..| .
T Consensus       211 ~gIrvN~I~PG~t~~~~~------~~~~~~~~~~~~~p-l-----------~~R~~~peeiA~~v~fL~S~~s~~itG~~  272 (284)
T d1e7wa_         211 LQIRVNGVGPGLSVLVDD------MPPAVWEGHRSKVP-L-----------YQRDSSAAEVSDVVIFLCSSKAKYITGTC  272 (284)
T ss_dssp             GTEEEEEEEESSBCCGGG------SCHHHHHHHHTTCT-T-----------TTSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             cccccccccccccccccc------CCHHHHHHHHhcCC-C-----------CCCCCCHHHHHHHHHHHhCchhcCccCCe
Confidence             89999999986322111      11122222222211 1           0114569999999999886543  345 4


Q ss_pred             EEEec
Q 035985          219 YICCA  223 (293)
Q Consensus       219 y~~~~  223 (293)
                      +.++|
T Consensus       273 i~VDG  277 (284)
T d1e7wa_         273 VKVDG  277 (284)
T ss_dssp             EEEST
T ss_pred             EEECc
Confidence            46644

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=98.23  E-value=4.4e-06  Score=65.14  Aligned_cols=170  Identities=15%  Similarity=0.053  Sum_probs=104.5

Q ss_pred             CCeEEEecCCCCCcchhhhhc-------CCCEEEEecccCCCCCC--Cc--------cccchhHHHHHHHHHHHHHhcC-
Q 035985           15 GELKIFRADLTDEASFDAPIS-------RSDIVFHVATPVNFSSD--DP--------ETDMIKPAIQGVVNVLKACTKT-   76 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~-------~~d~Vih~a~~~~~~~~--~~--------~~~~~~~n~~~~~~l~~~~~~~-   76 (293)
                      .+...+..|+.+..+..+.+.       ..|++||.|+.......  ..        .......|+.+...+++++... 
T Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (258)
T d1qsga_          55 GSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML  134 (258)
T ss_dssp             TCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             CCcceeecccchHHHHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            467888889988876665543       57999999987532110  00        0134455666666666666543 


Q ss_pred             CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCC
Q 035985           77 KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSL  153 (293)
Q Consensus        77 ~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~  153 (293)
                      ++-+.+|++||.....+.                        .....|+.+|...+.+++.++.+.   |+++..|.|+.
T Consensus       135 ~~~~~Ii~iss~~~~~~~------------------------~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~  190 (258)
T d1qsga_         135 NPGSALLTLSYLGAERAI------------------------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGP  190 (258)
T ss_dssp             EEEEEEEEEECGGGTSBC------------------------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECC
T ss_pred             cCCcEEEEecchhhccCC------------------------CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccc
Confidence            113568888887533221                        123579999999999999988764   79999999999


Q ss_pred             ccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCc-EEEec
Q 035985          154 MSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGR-YICCA  223 (293)
Q Consensus       154 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~-y~~~~  223 (293)
                      |..+......  ............   ++.          .-+...+|+|.+++.++.+..  ..|. +.++|
T Consensus       191 i~T~~~~~~~--~~~~~~~~~~~~---~pl----------~R~~~peeia~~v~fL~s~~s~~itG~~i~vDG  248 (258)
T d1qsga_         191 IRTLAASGIK--DFRKMLAHCEAV---TPI----------RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG  248 (258)
T ss_dssp             CCCTTGGGST--THHHHHHHHHHH---STT----------SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             cccccccccc--hhhhHHHHHHhC---CCC----------CCCcCHHHHHHHHHHHhCchhcCccCceEEECc
Confidence            9766432211  111111111111   111          115669999999999986543  4554 46644

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.11  E-value=2.9e-05  Score=62.61  Aligned_cols=109  Identities=12%  Similarity=0.127  Sum_probs=74.3

Q ss_pred             CCCCCcchhhhh-------cCCCEEEEecccCCCCC--------CCccccchhHHHHHHHHHHHHHhcC-CCccEEEEec
Q 035985           23 DLTDEASFDAPI-------SRSDIVFHVATPVNFSS--------DDPETDMIKPAIQGVVNVLKACTKT-KTVKRVILTS   86 (293)
Q Consensus        23 Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S   86 (293)
                      |+.+.+.+++++       .++|++||.|+......        .++. ..+++|+.+...+++++... .+-.++|.+|
T Consensus        93 d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~-~~~~vn~~~~~~~~k~~~~~m~~~GsIv~is  171 (329)
T d1uh5a_          93 NMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYL-DALSKSSYSLISLCKYFVNIMKPQSSIISLT  171 (329)
T ss_dssp             HTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             hhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhh-hhcccchhHHHHHHHHHHhhcccccccccce
Confidence            566666666554       37899999998643211        1122 56778888888888887654 1135788888


Q ss_pred             ccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh----CCceEEEEccCCcc
Q 035985           87 SAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE----NNIDLITVIPSLMS  155 (293)
Q Consensus        87 S~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~----~~~~~~ilR~~~v~  155 (293)
                      |.....+                       .+.....|+.+|...+.+++.++.+    +|+++..|.|+.|-
T Consensus       172 s~~~~~~-----------------------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~  221 (329)
T d1uh5a_         172 YHASQKV-----------------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             CGGGTSC-----------------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             eehhccc-----------------------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence            8653221                       1112347999999999999987753    48999999999774

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=97.99  E-value=8.6e-06  Score=63.75  Aligned_cols=119  Identities=13%  Similarity=0.030  Sum_probs=72.7

Q ss_pred             CCeEEEecCCCCCcchhhhh----------cCCCEEEEecccCCCC---CCCcc-------ccchhHHHHHHHHHHHHHh
Q 035985           15 GELKIFRADLTDEASFDAPI----------SRSDIVFHVATPVNFS---SDDPE-------TDMIKPAIQGVVNVLKACT   74 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~----------~~~d~Vih~a~~~~~~---~~~~~-------~~~~~~n~~~~~~l~~~~~   74 (293)
                      .+...+++|+++.+++.+++          ..+|+++|+|+.....   .....       ...+..|+.........+.
T Consensus        55 ~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (268)
T d2h7ma1          55 AKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALL  134 (268)
T ss_dssp             SCCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             CceeeEeeecccccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHh
Confidence            46888999999987655443          2479999999865311   11111       0223344445555555554


Q ss_pred             cCCCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEcc
Q 035985           75 KTKTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIP  151 (293)
Q Consensus        75 ~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~  151 (293)
                      ........+.++|......                        ......|+.+|...+.+++.++.+.   |+++..|.|
T Consensus       135 ~~~~~~~~i~~~s~~~~~~------------------------~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~P  190 (268)
T d2h7ma1         135 PIMNPGGSIVGMDFDPSRA------------------------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAA  190 (268)
T ss_dssp             GGEEEEEEEEEEECCCSSC------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred             hhccccccccccccccccc------------------------CcccchhhccccchhhccccchhhhhccCCcceEEec
Confidence            4321233444444321111                        1123489999999999999887653   799999999


Q ss_pred             CCccCC
Q 035985          152 SLMSGP  157 (293)
Q Consensus       152 ~~v~G~  157 (293)
                      +.+-.+
T Consensus       191 G~v~T~  196 (268)
T d2h7ma1         191 GPIRTL  196 (268)
T ss_dssp             CCCCCH
T ss_pred             CCCCCh
Confidence            987543

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=1.4e-05  Score=62.65  Aligned_cols=116  Identities=14%  Similarity=0.110  Sum_probs=81.1

Q ss_pred             CCeEEEecCCCCCcchhhhh-------cCCCEEEEecccCCCCC--CCcc---ccchhHHHHHHHHHHHHHhcC---CCc
Q 035985           15 GELKIFRADLTDEASFDAPI-------SRSDIVFHVATPVNFSS--DDPE---TDMIKPAIQGVVNVLKACTKT---KTV   79 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~~~--~~~~---~~~~~~n~~~~~~l~~~~~~~---~~~   79 (293)
                      ..+..+..|+.+.......+       ..+|++++.|+......  ....   ...+++|+.++..+.+.+...   + -
T Consensus        64 ~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~  142 (269)
T d1xu9a_          64 ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-N  142 (269)
T ss_dssp             SEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T
T ss_pred             ccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-C
Confidence            45778889999887665543       36899999998754221  1111   256888988888777766421   2 2


Q ss_pred             cEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-----CCceEEEEccCCc
Q 035985           80 KRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-----NNIDLITVIPSLM  154 (293)
Q Consensus        80 ~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-----~~~~~~ilR~~~v  154 (293)
                      .++|++||.....+.                        .....|+.+|...+.+.+.++.+     .++++..+.|+.|
T Consensus       143 G~ii~isS~~~~~~~------------------------p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v  198 (269)
T d1xu9a_         143 GSIVVVSSLAGKVAY------------------------PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI  198 (269)
T ss_dssp             CEEEEEEEGGGTSCC------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCB
T ss_pred             CcceEeccchhcCCC------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcC
Confidence            589999997643322                        12358999999999999988765     3588889999877


Q ss_pred             c
Q 035985          155 S  155 (293)
Q Consensus       155 ~  155 (293)
                      -
T Consensus       199 ~  199 (269)
T d1xu9a_         199 D  199 (269)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.81  E-value=6.3e-05  Score=57.57  Aligned_cols=168  Identities=19%  Similarity=0.140  Sum_probs=100.4

Q ss_pred             CeEEEecCCCCCcchhhhhc------CCCEEEEecccCCCC------CC---CccccchhHHHHHHHHHHHHHhcC----
Q 035985           16 ELKIFRADLTDEASFDAPIS------RSDIVFHVATPVNFS------SD---DPETDMIKPAIQGVVNVLKACTKT----   76 (293)
Q Consensus        16 ~v~~v~~Dl~d~~~~~~~~~------~~d~Vih~a~~~~~~------~~---~~~~~~~~~n~~~~~~l~~~~~~~----   76 (293)
                      +...+++|+++......+..      ..+.+++.++.....      ..   ......++.|+.+...++..+...    
T Consensus        39 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  118 (241)
T d1uaya_          39 DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMREN  118 (241)
T ss_dssp             SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC
T ss_pred             cceEeeccccchhhhHHHHHhhhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhh
Confidence            56778889888765555442      345555555432110      00   111256778888877776654321    


Q ss_pred             -----CCccEEEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHh---CCceEEE
Q 035985           77 -----KTVKRVILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQE---NNIDLIT  148 (293)
Q Consensus        77 -----~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~---~~~~~~i  148 (293)
                           ++-.++|++||.....+.+                        ....|+.+|...+.+.+.++.+   +|+++..
T Consensus       119 ~~~~~~~~G~Ii~isS~~~~~~~~------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~  174 (241)
T d1uaya_         119 PPDAEGQRGVIVNTASVAAFEGQI------------------------GQAAYAASKGGVVALTLPAARELAGWGIRVVT  174 (241)
T ss_dssp             CCCTTSCSEEEEEECCTHHHHCCT------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             hhhcccCceeeeeecchhhccCCC------------------------CchhhHHHHHHHHHHHHHHHHHHhhcCCceee
Confidence                 1135899999986543322                        2358999999999999998875   3899999


Q ss_pred             EccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCCCCCc-EEEec
Q 035985          149 VIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKESASGR-YICCA  223 (293)
Q Consensus       149 lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~~~~~-y~~~~  223 (293)
                      |.|+.|-.+.....    .......+..... +.           .-+...+|+|++++.++++....|. ..++|
T Consensus       175 V~PG~i~T~~~~~~----~~~~~~~~~~~~~-~~-----------~R~g~pedvA~~v~fL~s~~~iTG~~i~VDG  234 (241)
T d1uaya_         175 VAPGLFDTPLLQGL----PEKAKASLAAQVP-FP-----------PRLGRPEEYAALVLHILENPMLNGEVVRLDG  234 (241)
T ss_dssp             EEECSCSSHHHHTS----CHHHHHHHHTTCC-SS-----------CSCCCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             ecCCcccccccchh----hhhHHHHHHhcCC-CC-----------CCCcCHHHHHHHHHHHHhCCCCCCCEEEECC
Confidence            99998865422111    1111111111111 10           1134589999999998886555564 46654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.77  E-value=4.9e-05  Score=59.51  Aligned_cols=171  Identities=12%  Similarity=0.043  Sum_probs=95.7

Q ss_pred             CCeEEEecCCCCCcchhhhh-------cCCCEEEEecccCCCC--CCCccc---cchhHH----HHHHHHHHHHHhcCCC
Q 035985           15 GELKIFRADLTDEASFDAPI-------SRSDIVFHVATPVNFS--SDDPET---DMIKPA----IQGVVNVLKACTKTKT   78 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~-------~~~d~Vih~a~~~~~~--~~~~~~---~~~~~n----~~~~~~l~~~~~~~~~   78 (293)
                      ....+++.|+++.+++.+++       ..+|++||+++.....  ......   ..+..+    ......+.....+..+
T Consensus        55 ~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (274)
T d2pd4a1          55 NSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN  134 (274)
T ss_dssp             TCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred             CceeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc
Confidence            46778899999998777665       3689999999975421  111110   111111    1122333333333221


Q ss_pred             ccE-EEEecccchhcccccCCCCccccCCCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC---CceEEEEccCCc
Q 035985           79 VKR-VILTSSAAAVSINAQNVTGLVMDEKNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN---NIDLITVIPSLM  154 (293)
Q Consensus        79 ~~~-~v~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~---~~~~~ilR~~~v  154 (293)
                      ... ++.+|+.. ...                       .......|+.+|...+.+++.++.+.   |+++..+.|+.+
T Consensus       135 ~~~~i~~~s~~~-~~~-----------------------~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v  190 (274)
T d2pd4a1         135 NGASVLTLSYLG-STK-----------------------YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPI  190 (274)
T ss_dssp             EEEEEEEEECGG-GTS-----------------------BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC
T ss_pred             cCcceeeecccc-ccc-----------------------ccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcc
Confidence            334 44444433 211                       11233589999999999998877653   899999999988


Q ss_pred             cCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcceeHHhHHHHHHHhhccCC--CCC-cEEEecc
Q 035985          155 SGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASG-RYICCAV  224 (293)
Q Consensus       155 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~-~y~~~~~  224 (293)
                      ..+.......  .......... ..  +          ..-+...+|+|.+++.++....  ..| .+.++|.
T Consensus       191 ~T~~~~~~~~--~~~~~~~~~~-~~--p----------~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG  248 (274)
T d2pd4a1         191 RTLASSGIAD--FRMILKWNEI-NA--P----------LRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  248 (274)
T ss_dssp             CCTTGGGSTT--HHHHHHHHHH-HS--T----------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCccccccCc--hHHHHHHHhh-hh--h----------ccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCC
Confidence            7654322111  1111111100 01  0          1234679999999999987643  345 4566543

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.73  E-value=5.1e-05  Score=58.04  Aligned_cols=129  Identities=19%  Similarity=0.118  Sum_probs=86.1

Q ss_pred             CCCEEEEecccCC---CCCCCcc---ccchhHHHHHHHHHHHHHhcC-CCccEEEEecccchhcccccCCCCccccCCCC
Q 035985           36 RSDIVFHVATPVN---FSSDDPE---TDMIKPAIQGVVNVLKACTKT-KTVKRVILTSSAAAVSINAQNVTGLVMDEKNW  108 (293)
Q Consensus        36 ~~d~Vih~a~~~~---~~~~~~~---~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  108 (293)
                      ++|++||+||...   .......   +..++.|+.++..+.+++... ++-.++|++||..+..+.              
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~--------------  136 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT--------------  136 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC--------------
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc--------------
Confidence            4899999998532   1111111   256788999988888777643 113689999998643221              


Q ss_pred             CchhhhccCCCCCchhHHHHHHHHHHHHHHHHh-----CCceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccc
Q 035985          109 TDVEFLSSEKPPTWGYAASKTLAERAACKFAQE-----NNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNG  183 (293)
Q Consensus       109 ~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (293)
                                .....|+.+|...+.+.+.++.+     .|+++..+.|+.+..+.            .+......     
T Consensus       137 ----------~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~------------~~~~~~~~-----  189 (236)
T d1dhra_         137 ----------PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM------------NRKSMPEA-----  189 (236)
T ss_dssp             ----------TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH------------HHHHSTTS-----
T ss_pred             ----------cCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc------------chhhCccc-----
Confidence                      12358999999999999999865     36999999999885421            11111100     


Q ss_pred             cccccccCCCCcceeHHhHHHHHHHhhccC
Q 035985          184 LKGMQMLSGSISISHVEDVCRAHIFLAEKE  213 (293)
Q Consensus       184 ~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~  213 (293)
                       +       .-.++..+++++.++.++...
T Consensus       190 -~-------~~~~~~pe~va~~~~~l~s~~  211 (236)
T d1dhra_         190 -D-------FSSWTPLEFLVETFHDWITGN  211 (236)
T ss_dssp             -C-------GGGSEEHHHHHHHHHHHHTTT
T ss_pred             -h-------hhcCCCHHHHHHHHHHHhCCC
Confidence             0       123677999999999888654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.73  E-value=5.7e-05  Score=57.70  Aligned_cols=128  Identities=22%  Similarity=0.230  Sum_probs=82.9

Q ss_pred             CCCEEEEecccCCC---CCCCc---cccchhHHHHHHHHHHHHHhcC-CCccEEEEecccchhcccccCCCCccccCCCC
Q 035985           36 RSDIVFHVATPVNF---SSDDP---ETDMIKPAIQGVVNVLKACTKT-KTVKRVILTSSAAAVSINAQNVTGLVMDEKNW  108 (293)
Q Consensus        36 ~~d~Vih~a~~~~~---~~~~~---~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~~~E~~~  108 (293)
                      .+|++||+||....   ...+.   .+..++.|+.++..+++++... .+-.++|++||.....+.+             
T Consensus        71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~-------------  137 (235)
T d1ooea_          71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP-------------  137 (235)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-------------
T ss_pred             CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcc-------------
Confidence            58999999996421   11121   1246788999988887777543 1135899999986443221             


Q ss_pred             CchhhhccCCCCCchhHHHHHHHHHHHHHHHHhC-----CceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccc
Q 035985          109 TDVEFLSSEKPPTWGYAASKTLAERAACKFAQEN-----NIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNG  183 (293)
Q Consensus       109 ~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~~~-----~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (293)
                                 ....|+.+|...+.+.+.++.+.     ++++..+.|+.+-.+           +....+.+.      
T Consensus       138 -----------~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~-----------~~~~~~~~~------  189 (235)
T d1ooea_         138 -----------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP-----------MNRKWMPNA------  189 (235)
T ss_dssp             -----------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH-----------HHHHHSTTC------
T ss_pred             -----------cccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc-----------chhhhCcCC------
Confidence                       23589999999999999987653     668888888876321           111211111      


Q ss_pred             cccccccCCCCcceeHHhHHHHHHHhhcc
Q 035985          184 LKGMQMLSGSISISHVEDVCRAHIFLAEK  212 (293)
Q Consensus       184 ~~g~~~~~~~~~~v~v~D~a~~~~~~~~~  212 (293)
                       +       ...++..+|+++.++..+..
T Consensus       190 -~-------~~~~~~~~~va~~~~~~l~~  210 (235)
T d1ooea_         190 -D-------HSSWTPLSFISEHLLKWTTE  210 (235)
T ss_dssp             -C-------GGGCBCHHHHHHHHHHHHHC
T ss_pred             -c-------cccCCCHHHHHHHHHHHhcC
Confidence             1       23467799999998765544

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=97.61  E-value=0.00032  Score=55.36  Aligned_cols=150  Identities=15%  Similarity=0.048  Sum_probs=89.6

Q ss_pred             cCCCEEEEecccCCCCC--------CCccccchhHHHHHHHHHHHHHhcCCC-ccEEEEecccchhcccccCCCCccccC
Q 035985           35 SRSDIVFHVATPVNFSS--------DDPETDMIKPAIQGVVNVLKACTKTKT-VKRVILTSSAAAVSINAQNVTGLVMDE  105 (293)
Q Consensus        35 ~~~d~Vih~a~~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~E  105 (293)
                      .++|++||.||......        ++.. ..+++|+.+...+++++..... -.+.+.+++.+....            
T Consensus       118 G~iDilVnnAg~~~~~~~~~~~~~~~~~~-~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------------  184 (297)
T d1d7oa_         118 GSIDILVHSLANGPEVSKPLLETSRKGYL-AAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI------------  184 (297)
T ss_dssp             SCEEEEEECCCCCTTTTSCGGGCCHHHHH-HHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC------------
T ss_pred             CCCcccccccccccccccchhhhhccccc-ccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccc------------
Confidence            36899999998643111        1122 5778899999998888765421 124555555432211            


Q ss_pred             CCCCchhhhccCCCCCchhHHHHHHHHHHHHHHHH----hCCceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccc
Q 035985          106 KNWTDVEFLSSEKPPTWGYAASKTLAERAACKFAQ----ENNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLL  181 (293)
Q Consensus       106 ~~~~~~~~~~~~~~p~~~Y~~~K~~~E~~~~~~~~----~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  181 (293)
                                 .......|..+|...+.+++.++.    ++|+++..|.|+.+..+.....  .....+.+.....   .
T Consensus       185 -----------~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~~---~  248 (297)
T d1d7oa_         185 -----------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI--GFIDTMIEYSYNN---A  248 (297)
T ss_dssp             -----------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC--SHHHHHHHHHHHH---S
T ss_pred             -----------ccccccceecccccccccccccchhccccceEEecccccccccchhhhhc--cCCHHHHHHHHhC---C
Confidence                       112234799999988887776543    3489999999999977654321  1122222222111   1


Q ss_pred             cccccccccCCCCcceeHHhHHHHHHHhhccCC--CCCc-EEEec
Q 035985          182 NGLKGMQMLSGSISISHVEDVCRAHIFLAEKES--ASGR-YICCA  223 (293)
Q Consensus       182 ~~~~g~~~~~~~~~~v~v~D~a~~~~~~~~~~~--~~~~-y~~~~  223 (293)
                      +.          .-+...+|+|.+++.++....  ..|. +.++|
T Consensus       249 Pl----------gR~~~peevA~~v~fL~S~~a~~itGq~i~vDG  283 (297)
T d1d7oa_         249 PI----------QKTLTADEVGNAAAFLVSPLASAITGATIYVDN  283 (297)
T ss_dssp             SS----------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CC----------CCCCCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence            11          124669999999999986543  3454 46644

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=97.58  E-value=0.0039  Score=47.87  Aligned_cols=85  Identities=20%  Similarity=0.161  Sum_probs=56.0

Q ss_pred             CchhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCcce
Q 035985          121 TWGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISIS  197 (293)
Q Consensus       121 ~~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v  197 (293)
                      ...|+.+|...+.+.+.++.+   +|+++..|.|+.+..+...+      ......+.... ++           .+-+.
T Consensus       169 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~------~~~~~~~~~~~-pl-----------~r~~~  230 (266)
T d1mxha_         169 FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP------QETQEEYRRKV-PL-----------GQSEA  230 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC------HHHHHHHHTTC-TT-----------TSCCB
T ss_pred             hhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC------HHHHHHHHhcC-CC-----------CCCCC
Confidence            358999999999999988765   38999999999886543221      12222222221 11           12245


Q ss_pred             eHHhHHHHHHHhhccCC--CCC-cEEEec
Q 035985          198 HVEDVCRAHIFLAEKES--ASG-RYICCA  223 (293)
Q Consensus       198 ~v~D~a~~~~~~~~~~~--~~~-~y~~~~  223 (293)
                      ..+|+|.+++.++....  ..| .+.++|
T Consensus       231 ~peeva~~v~fL~s~~s~~itG~~i~vDG  259 (266)
T d1mxha_         231 SAAQIADAIAFLVSKDAGYITGTTLKVDG  259 (266)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence            69999999999997653  355 456654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.39  E-value=0.068  Score=36.54  Aligned_cols=58  Identities=14%  Similarity=0.140  Sum_probs=44.2

Q ss_pred             cchhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           28 ASFDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        28 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      .+..+.++++|+||.+||.......+.. +.+..|....+.+++.+.+++.-..++.+|
T Consensus        60 ~~~~~~~~~aDivVitag~~~~~g~sR~-~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          60 EQLPDCLKGCDVVVIPAGVPRKPGMTRD-DLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             GGHHHHHTTCSEEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CChHHHhCCCCEEEECCCcCCCCCCCcc-hHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            4556778899999999997654444555 889999999999999999997333444443

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.01  E-value=0.23  Score=33.78  Aligned_cols=54  Identities=17%  Similarity=0.143  Sum_probs=41.1

Q ss_pred             hhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           32 APISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        32 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      +.++++|+||.+||.......+-. +.+..|....+.+++.+.+.++-..++.+|
T Consensus        65 ~~~~~aDvvvitaG~~~k~g~~R~-dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          65 PALEGADVVLISAGVRRKPGMDRS-DLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             HHHTTCSEEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             cccCCCCEEEECCCccCCCCcchh-hHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            457789999999998754444455 889999999999999999887333455544

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=91.15  E-value=0.011  Score=42.93  Aligned_cols=33  Identities=18%  Similarity=0.226  Sum_probs=29.2

Q ss_pred             CCeEEEecCCCCCcchhhhhcCCCEEEEecccC
Q 035985           15 GELKIFRADLTDEASFDAPISRSDIVFHVATPV   47 (293)
Q Consensus        15 ~~v~~v~~Dl~d~~~~~~~~~~~d~Vih~a~~~   47 (293)
                      .++..+.+|++|.+.+.+++.++|+|||+|+..
T Consensus        71 ~~~~~~~~d~~~~~~~~~~~~~iDilin~Ag~g  103 (191)
T d1luaa1          71 FKVNVTAAETADDASRAEAVKGAHFVFTAGAIG  103 (191)
T ss_dssp             HTCCCEEEECCSHHHHHHHTTTCSEEEECCCTT
T ss_pred             cchhhhhhhcccHHHHHHHhcCcCeeeecCccc
Confidence            356788899999999999999999999999863

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.19  E-value=0.44  Score=32.40  Aligned_cols=53  Identities=9%  Similarity=0.111  Sum_probs=40.1

Q ss_pred             hhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEe
Q 035985           32 APISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILT   85 (293)
Q Consensus        32 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~   85 (293)
                      +.++++|+||.+|+.......... +.+..|..-.+.+++...+.++-..++.+
T Consensus        70 ~~l~daDvvvitag~~~~~~~~R~-dl~~~N~~i~~~i~~~i~~~~p~a~~ivv  122 (148)
T d1ldna1          70 DDCRDADLVVICAGANQKPGETRL-DLVDKNIAIFRSIVESVMASGFQGLFLVA  122 (148)
T ss_dssp             GGTTTCSEEEECCSCCCCTTTCSG-GGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             HHhccceeEEEecccccccCcchh-HHHHHHHHHHHHHHHHHHhhCCCceEEEe
Confidence            456789999999998765444455 88999999999999999888733445554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.67  E-value=0.34  Score=32.90  Aligned_cols=52  Identities=15%  Similarity=0.081  Sum_probs=39.6

Q ss_pred             hhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEe
Q 035985           32 APISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILT   85 (293)
Q Consensus        32 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~   85 (293)
                      +.++++|+||-+||.......+-. +.+..|..-.+.+++...+.+ .+.++.+
T Consensus        70 ~~l~~aDvVVitAG~~~~~g~sR~-dl~~~Na~iv~~i~~~i~~~~-~~~iivV  121 (145)
T d1hyea1          70 RIIDESDVVIITSGVPRKEGMSRM-DLAKTNAKIVGKYAKKIAEIC-DTKIFVI  121 (145)
T ss_dssp             GGGTTCSEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHC-CCEEEEC
T ss_pred             HHhccceEEEEecccccCCCCChh-hhhhhhHHHHHHHHHHHhccC-CCeEEEE
Confidence            466789999999998654444444 789999999999999998887 4555443

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=88.76  E-value=0.43  Score=35.54  Aligned_cols=89  Identities=18%  Similarity=0.140  Sum_probs=49.1

Q ss_pred             chhHHHHHHHHHHHHHHHHh---CCceEEEEccCCccCCCCCCCCCccHHHHHHHHhCCcccccccccccccCCCCccee
Q 035985          122 WGYAASKTLAERAACKFAQE---NNIDLITVIPSLMSGPSLTPDIPSSVALAATLITGNDFLLNGLKGMQMLSGSISISH  198 (293)
Q Consensus       122 ~~Y~~~K~~~E~~~~~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~  198 (293)
                      ..|+.+|...+.+.+.++.+   +|+++..|.|+.+-.+........  ......+.....++            --+..
T Consensus       153 ~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~~Pl------------gR~g~  218 (257)
T d1fjha_         153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD--PRYGESIAKFVPPM------------GRRAE  218 (257)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCCST------------TSCCC
T ss_pred             HHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC--HHHHHHHHhcCCCC------------CCCcC
Confidence            36999999999999988754   489999999998865432111000  00011111111101            11456


Q ss_pred             HHhHHHHHHHhhccCC--CCCc-EEEecc
Q 035985          199 VEDVCRAHIFLAEKES--ASGR-YICCAV  224 (293)
Q Consensus       199 v~D~a~~~~~~~~~~~--~~~~-y~~~~~  224 (293)
                      .+|+|.+++.++....  ..|. +.++|.
T Consensus       219 p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         219 PSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             THHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            8999999999986543  3454 466543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=88.30  E-value=0.51  Score=31.87  Aligned_cols=53  Identities=11%  Similarity=0.149  Sum_probs=39.7

Q ss_pred             hhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           33 PISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        33 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      .++++|+||-+||.......... +.+..|..-.+.++..+.+.+.-..++.+|
T Consensus        66 ~~~daDvVVitaG~~~~~g~~R~-dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          66 ICRDADMVVITAGPRQKPGQSRL-ELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             GGTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             HhhCCcEEEEecccccCCCCchh-hhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            46689999999998765444555 788999999999999999887333444433

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=88.14  E-value=0.78  Score=31.58  Aligned_cols=53  Identities=13%  Similarity=0.100  Sum_probs=39.9

Q ss_pred             hhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEec
Q 035985           33 PISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILTS   86 (293)
Q Consensus        33 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S   86 (293)
                      .++++|+|+.+||.......+.. +.+..|....+.++....+.+.-.-++.+|
T Consensus        85 ~~~~adiVVitAg~~~~~g~tR~-~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          85 VTANSKIVVVTAGVRQQEGESRL-NLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             GGTTCSEEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             hcccccEEEEecCCccccCcchH-HHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            46689999999998765544555 888999999999999998887333444443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=87.80  E-value=0.54  Score=31.87  Aligned_cols=51  Identities=12%  Similarity=0.221  Sum_probs=33.9

Q ss_pred             hhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEe
Q 035985           33 PISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILT   85 (293)
Q Consensus        33 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~   85 (293)
                      .++++|+||.+|+.......... +....|+...+.+++...+.+ .+-++.+
T Consensus        69 ~~~~adivvitag~~~~~g~~r~-~l~~~N~~i~~~~~~~i~~~~-p~aiviv  119 (146)
T d1ez4a1          69 DCKDADLVVITAGAPQKPGESRL-DLVNKNLNILSSIVKPVVDSG-FDGIFLV  119 (146)
T ss_dssp             GGTTCSEEEECCCC-----------CHHHHHHHHHHHHHHHHHTT-CCSEEEE
T ss_pred             HhccccEEEEecccccCCCCCHH-HHHHHHHHHHHHHHHHHhhcC-CCcEEEE
Confidence            45789999999997654434444 788999999999999999987 4444444

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=87.75  E-value=0.8  Score=30.81  Aligned_cols=51  Identities=12%  Similarity=0.022  Sum_probs=38.4

Q ss_pred             hcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEe
Q 035985           34 ISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILT   85 (293)
Q Consensus        34 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~   85 (293)
                      ++++|+|+-+||.......+-. +.++.|..-.+.+++...+.+.-..++.+
T Consensus        68 ~~~aDiVvitaG~~~~~g~~R~-dl~~~N~~I~~~i~~~i~~~~p~~i~ivv  118 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQPGQTRI-DLAGDNAPIMEDIQSSLDEHNDDYISLTT  118 (142)
T ss_dssp             GTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHTTCSCCEEEEC
T ss_pred             hhhcCEEEEecccccccCCchh-hHHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence            5689999999997654444444 88999999999999999998733334443

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.66  E-value=0.57  Score=31.47  Aligned_cols=52  Identities=12%  Similarity=0.179  Sum_probs=39.0

Q ss_pred             hhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEe
Q 035985           32 APISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILT   85 (293)
Q Consensus        32 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~   85 (293)
                      +.++++|+||-+|+.......... +.+..|..-.+.+++...+.+ .+-++.+
T Consensus        63 ~~~~~adivvitag~~~~~g~~r~-dl~~~N~~I~~~i~~~i~~~~-p~aiviv  114 (140)
T d1a5za1          63 ADLKGSDVVIVAAGVPQKPGETRL-QLLGRNARVMKEIARNVSKYA-PDSIVIV  114 (140)
T ss_dssp             GGGTTCSEEEECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred             HHhcCCCEEEEecccccCCCcchh-hhhccccchHHHHHHHHHhcC-CCcEEEE
Confidence            346789999999998664444444 778889999999999999887 3444443

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=86.19  E-value=1.1  Score=30.55  Aligned_cols=56  Identities=9%  Similarity=0.078  Sum_probs=41.5

Q ss_pred             hhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCC-CccEEEEec
Q 035985           30 FDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTK-TVKRVILTS   86 (293)
Q Consensus        30 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S   86 (293)
                      ..+.++++|+||-+||.......+.. +.+..|+.-.+.+.+.+.+.. +-..++.+|
T Consensus        74 ~~~~~~~advViitaG~~~~pg~~r~-dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          74 PKVAFKDADYALLVGAAPRKAGMERR-DLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hhhhcccccEEEeecCcCCCCCCcHH-HHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            45678899999999998765544555 788899999999999998853 123454544

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=85.57  E-value=0.63  Score=31.32  Aligned_cols=53  Identities=11%  Similarity=0.118  Sum_probs=36.3

Q ss_pred             hhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEe
Q 035985           32 APISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILT   85 (293)
Q Consensus        32 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~   85 (293)
                      +.++++|+|+-+||.......... +.+..|..-.+.+++.+.+.++-..++.+
T Consensus        64 ~~~~~adivvitag~~~~~~~~r~-~l~~~N~~i~~~i~~~i~~~~p~ai~ivv  116 (142)
T d1y6ja1          64 SDVKDCDVIVVTAGANRKPGETRL-DLAKKNVMIAKEVTQNIMKYYNHGVILVV  116 (142)
T ss_dssp             GGGTTCSEEEECCCC------CHH-HHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             HHhCCCceEEEecccccCcCcchh-HHhhHHHHHHHHHHHHhhccCCCceEEEe
Confidence            456789999999997764444455 78899999999999999988732334443

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.50  E-value=1.2  Score=29.90  Aligned_cols=52  Identities=13%  Similarity=0.099  Sum_probs=39.5

Q ss_pred             hhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEe
Q 035985           32 APISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILT   85 (293)
Q Consensus        32 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~   85 (293)
                      +.++++|+||-+|+.......... +.+..|..-...+++...+.+ .+.++.+
T Consensus        65 ~~~~~adiVvitag~~~~~g~~r~-~l~~~n~~i~~~i~~~i~~~~-p~aiviv  116 (142)
T d1ojua1          65 SLLKGSEIIVVTAGLARKPGMTRL-DLAHKNAGIIKDIAKKIVENA-PESKILV  116 (142)
T ss_dssp             GGGTTCSEEEECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHTTS-TTCEEEE
T ss_pred             HHhccccEEEEeccccCCCCCchH-HHHHHhhHHHHHHHHHHHhhC-CCcEEEE
Confidence            467789999999997654444445 788899999999999999987 3444443

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=84.76  E-value=1.2  Score=29.78  Aligned_cols=51  Identities=16%  Similarity=0.157  Sum_probs=33.7

Q ss_pred             hhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEEe
Q 035985           33 PISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVILT   85 (293)
Q Consensus        33 ~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~   85 (293)
                      .++++|+||-+||.......... +.+..|..-.+.+++...+.+ .+-++.+
T Consensus        66 ~~~~advvvitag~~~~~~~~r~-dl~~~N~~i~~~i~~~i~k~~-p~aiviv  116 (142)
T d1uxja1          66 DTANSDVIVVTSGAPRKPGMSRE-DLIKVNADITRACISQAAPLS-PNAVIIM  116 (142)
T ss_dssp             GGTTCSEEEECCSCC----------CHHHHHHHHHHHHHHHGGGC-TTCEEEE
T ss_pred             HhcCCCEEEEeeeccCCcCcchh-HHHhHHHHHHHHHHHHHhccC-CCceEEE
Confidence            35679999999997654333444 778999999999999999987 3444443

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=84.59  E-value=1.4  Score=30.76  Aligned_cols=56  Identities=9%  Similarity=-0.025  Sum_probs=41.9

Q ss_pred             hhhhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCC-CccEEEEec
Q 035985           30 FDAPISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTK-TVKRVILTS   86 (293)
Q Consensus        30 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S   86 (293)
                      ..+.++++|+||-+||.......... +.+..|..-.+.+.+++.+.. +-.+++.+|
T Consensus        94 ~~~~~~~aDvVvi~ag~~rkpg~tR~-Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          94 PYEVFEDVDWALLIGAKPRGPGMERA-ALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             chhhccCCceEEEeeccCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            45667789999999998765555555 889999999999999998863 223455544

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=83.98  E-value=1.2  Score=29.85  Aligned_cols=51  Identities=24%  Similarity=0.174  Sum_probs=38.0

Q ss_pred             hhhcCCCEEEEecccCCCCCCCccccchhHHHHHHHHHHHHHhcCCCccEEEE
Q 035985           32 APISRSDIVFHVATPVNFSSDDPETDMIKPAIQGVVNVLKACTKTKTVKRVIL   84 (293)
Q Consensus        32 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~   84 (293)
                      +.++++|+|+-+||........-. +.+..|..-.+.+++.+.+.+ .+-++.
T Consensus        65 ~~~~dadvvvitag~~~~~g~~r~-~l~~~N~~i~~~i~~~i~~~~-p~aivi  115 (142)
T d1guza1          65 ADTANSDIVIITAGLPRKPGMTRE-DLLMKNAGIVKEVTDNIMKHS-KNPIII  115 (142)
T ss_dssp             GGGTTCSEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHC-SSCEEE
T ss_pred             HHhcCCeEEEEEEecCCCCCCchH-HHHHHHHHHHHHHHHHhhccC-CCeEEE
Confidence            456789999999997654434444 778899999999999998877 333443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=83.41  E-value=1.8  Score=29.43  Aligned_cols=54  Identities=15%  Similarity=0.193  Sum_probs=39.4

Q ss_pred             hhhhhcCCCEEEEecccCCCCCC-----CccccchhHHHHHHHHHHHHHhcCCCccEEEEe
Q 035985           30 FDAPISRSDIVFHVATPVNFSSD-----DPETDMIKPAIQGVVNVLKACTKTKTVKRVILT   85 (293)
Q Consensus        30 ~~~~~~~~d~Vih~a~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~   85 (293)
                      .++.++++|+|+.+|+......+     .-. +.+..|....+.+++.+.+.+ .+-++.+
T Consensus        70 ~~~~~~~adiVvitag~~~~~g~~~~~~tR~-~l~~~n~~iv~~i~~~i~~~~-p~aivii  128 (154)
T d1pzga1          70 YEAALTGADCVIVTAGLTKVPGKPDSEWSRN-DLLPFNSKIIREIGQNIKKYC-PKTFIIV  128 (154)
T ss_dssp             HHHHHTTCSEEEECCSCSSCTTCCGGGCCGG-GGHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred             hhhhhcCCCeEEEecccccCCCCCCcccchh-hhhhhhHHHHHHHHHHHHhcC-CCcEEEE
Confidence            34667889999999987643221     233 778899999999999999887 4444443