Citrus Sinensis ID: 036022

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-
MEIIKNNSWLMLFVLFTCFSLKSHVSFGADTISANQSLSGDQTIVSKGGVFVFGFFNPAPGKSSNYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLNISDGNLVLFNESQLPIWSTNLTATSRRSVDAVLLDEGNLVLRDLSNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGTWDDNAKIFSLVPEMTLNYIYNFSYVSNENESYFTYNVKDSTYTSRFIMDF
cccccccHHHHHHHHHHHHHHcccccccccccccccccccccEEEEcccEEEEEEEccccccccccEEEEEccccccccEEEEccccccccccccccEEEEccEEEEEcccccEEEEcccccccccccEEEEEccccEEEEEccccccccEEEEccccccccccccEEccEEcccccEEEEEEccccccccccEEEEEcccccccEEEEEEccEEEEEEccccccccEEEEEccccccccEEEEEEEcccEEEEEEEEccccEEEEEEEEc
cccccccHHHHHHHHHHHHHcccccEEEEcccccccccccccEEEccccEEEEEEEEccccccccEEEEEEEEEccccEEEEEEEccccccccccEEEEEccccEEEEEccccEEEEEcccccccccEEEEEcccccEEEEcccccccccEEEEccccccccccccccccccccccccEEEEcccccccccccEEEEEcccccccEEEEEcccEEEEEEcccccccEEEccccccccccEEEEEEEccccEEEEEEEEccccEEEEEEEEc
meiiknnsWLMLFVLFTCFslkshvsfgadtisanqslsgdqtivskggvfvfgffnpapgkssnyyiGMWYNKVSERTIVWVAnreqpvsdrfssvlnisdgnlvlfnesqlpiwstnltatsrrSVDAVLLDEGNLVLRDLSnnlseplwqsfdhpahtwipgmkltfnkrNNVSQLLTSWknkenpapglfslelapdgsnqYVILWNRSEQywrsgtwddnakiFSLVPEMTLNYIYNFSYvsnenesyftynvkdstytsRFIMDF
meiiknnsWLMLFVLFTCFSLKSHVSFGADTISANQSLSGDQTIVSKGGVFVFGFFNPAPGKSSNYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLNISDGNLVLFNESQLPIWStnltatsrrsVDAVLLDEGNLVLRDLSNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGTWDDNAKIFSLVPEMTLNYIYNFSYVSNENESYFtynvkdstytsrfimDF
MEIIKNNSWLMLFVLFTCFSLKSHVSFGADTISANQSLSGDQTIVSKggvfvfgffNPAPGKSSNYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLNISDGNLVLFNESQLPIWSTNLTATSRRSVDAVLLDEGNLVLRDLSNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGTWDDNAKIFSLVPEMTLNYIYNFSYVSNENESYFTYNVKDSTYTSRFIMDF
***IKNNSWLMLFVLFTCFSLKSHVSFGADTISANQSLSGDQTIVSKGGVFVFGFFNPAPGKSSNYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLNISDGNLVLFNESQLPIWSTNLTATSRRSVDAVLLDEGNLVLRDLSNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNK***APGLFSLELAPDGSNQYVILWNRSEQYWRSGTWDDNAKIFSLVPEMTLNYIYNFSYVSNENESYFTYNVKDSTYTSRFI***
******N*WLMLFVLFTCFSLKSHVSFGADTISANQSLSGDQTIVSKGGVFVFGFFNPAPGKSSNYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLNISDGNLVLFNESQLPIWSTNLTAT**RSVDAVLLDEGNLVLRDLSNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGTWDDNAKIFSLVPEMTLNYIYNFSYVSNENESYFTYNVKDSTYTSRFIMDF
MEIIKNNSWLMLFVLFTCFSLKSHVSFGADTISANQSLSGDQTIVSKGGVFVFGFFNPAPGKSSNYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLNISDGNLVLFNESQLPIWSTNLTATSRRSVDAVLLDEGNLVLRDLSNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGTWDDNAKIFSLVPEMTLNYIYNFSYVSNENESYFTYNVKDSTYTSRFIMDF
*EIIKNNSWLMLFVLFTCFSLKSHVSFGADTISANQSLSGDQTIVSKGGVFVFGFFNPAPGKSSNYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLNISDGNLVLFNESQLPIWSTNLTATSRRSVDAVLLDEGNLVLRDLSNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGTWDDNAKIFSLVPEMTLNYIYNFSYVSNENESYFTYNVKDSTYTSRFIMDF
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEIIKNNSWLMLFVLFTCFSLKSHVSFGADTISANQSLSGDQTIVSKGGVFVFGFFNPAPGKSSNYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLNISDGNLVLFNESQLPIWSTNLTATSRRSVDAVLLDEGNLVLRDLSNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGTWDDNAKIFSLVPEMTLNYIYNFSYVSNENESYFTYNVKDSTYTSRFIMDF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query271 2.2.26 [Sep-21-2011]
O64477 828 G-type lectin S-receptor- yes no 0.918 0.300 0.559 2e-72
Q9T058 849 G-type lectin S-receptor- no no 0.948 0.302 0.409 1e-48
O81905 850 Receptor-like serine/thre no no 0.870 0.277 0.426 3e-44
Q9ZT07 833 G-type lectin S-receptor- no no 0.863 0.280 0.402 3e-40
Q09092 857 Putative serine/threonine N/A no 0.922 0.291 0.402 1e-39
P0DH86 853 G-type lectin S-receptor- no no 0.874 0.277 0.418 9e-39
P0DH87 546 Putative inactive G-type no no 0.874 0.434 0.418 1e-38
O81906 849 G-type lectin S-receptor- no no 0.929 0.296 0.350 3e-38
O81832 783 G-type lectin S-receptor- no no 0.911 0.315 0.368 4e-38
Q39086 843 Receptor-like serine/thre no no 0.863 0.277 0.404 2e-37
>sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1 Back     alignment and function desciption
 Score =  272 bits (696), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 145/259 (55%), Positives = 185/259 (71%), Gaps = 10/259 (3%)

Query: 15  LFTCFSLKSHVSFGADTISANQSLSGDQTIVSKGGVFVFGFFNPAPGKSSNYYIGMWYNK 74
            F CF +  H S   DTIS + +LSGDQTIVS  G +  GFF P  G SSN+YIGMWY +
Sbjct: 11  FFICFFI--HGSSAVDTISGDFTLSGDQTIVSSDGTYEMGFFKP--GSSSNFYIGMWYKQ 66

Query: 75  VSERTIVWVANREQPVSDRFSSVLNISDGNLVLFNES-QLPIWSTNLTATSRRS-VDAVL 132
           +S+ TI+WVANR++ VSD+ SSV  IS+GNL+L + + Q P+WST L +TS  S ++AVL
Sbjct: 67  LSQ-TILWVANRDKAVSDKNSSVFKISNGNLILLDGNYQTPVWSTGLNSTSSVSALEAVL 125

Query: 133 LDEGNLVLRDLSNNLSE-PLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAP 191
            D+GNLVLR   ++LS   LWQSFDHP  TW+PG+K+  +KR   SQ LTSWK+ E+P+P
Sbjct: 126 QDDGNLVLRTGGSSLSANVLWQSFDHPGDTWLPGVKIRLDKRTGKSQRLTSWKSLEDPSP 185

Query: 192 GLFSLELAPDGSNQYVILWNRSEQYWRSGTWDDNAKIFSLVPEMTLNYIYNFSYVSNENE 251
           GLFSLEL  D S  Y ILWN S +YW SG W+  ++IF  VPEM LNYIYNFS+ SN  +
Sbjct: 186 GLFSLEL--DESTAYKILWNGSNEYWSSGPWNPQSRIFDSVPEMRLNYIYNFSFFSNTTD 243

Query: 252 SYFTYNVKDSTYTSRFIMD 270
           SYFTY++ +    SRF+MD
Sbjct: 244 SYFTYSIYNQLNVSRFVMD 262

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1
>sp|Q9T058|Y4119_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g11900 OS=Arabidopsis thaliana GN=At4g11900 PE=2 SV=1 Back     alignment and function description
>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3 Back     alignment and function description
>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2 Back     alignment and function description
>sp|P0DH86|SRK_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=SRK PE=2 SV=1 Back     alignment and function description
>sp|P0DH87|PSRK_ARATH Putative inactive G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana GN=PSEUDOSRKA PE=5 SV=1 Back     alignment and function description
>sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1 Back     alignment and function description
>sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4 Back     alignment and function description
>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
224145545 824 predicted protein [Populus trichocarpa] 0.966 0.317 0.691 3e-96
255544339 594 s-receptor kinase, putative [Ricinus com 0.981 0.447 0.656 4e-95
225447699 826 PREDICTED: G-type lectin S-receptor-like 0.963 0.315 0.657 1e-94
224126835 826 predicted protein [Populus trichocarpa] 0.963 0.315 0.664 5e-94
255547271 754 S-locus-specific glycoprotein S6 precurs 0.952 0.342 0.596 3e-86
255547267 779 S-locus-specific glycoprotein S6 precurs 0.963 0.335 0.593 2e-83
356517594 827 PREDICTED: G-type lectin S-receptor-like 0.948 0.310 0.602 2e-82
351721140 829 S-locus lectin protein kinase family pro 0.966 0.316 0.595 2e-81
357453591 829 Kinase-like protein [Medicago truncatula 0.955 0.312 0.575 5e-80
356542117 787 PREDICTED: G-type lectin S-receptor-like 0.959 0.330 0.574 4e-77
>gi|224145545|ref|XP_002325680.1| predicted protein [Populus trichocarpa] gi|222862555|gb|EEF00062.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  357 bits (917), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 186/269 (69%), Positives = 215/269 (79%), Gaps = 7/269 (2%)

Query: 4   IKNNSWLMLFVLFTCFSLKSHVSFGADTISANQSLSGDQTIVSKGGVFVFGFFNPAPGKS 63
           ++NN W+M FV+F CFSLK HVS GADTISAN SLSGDQT+VS G VF  GFF P  G S
Sbjct: 3   VRNNPWIMPFVIFLCFSLKPHVSLGADTISANSSLSGDQTVVSAGKVFELGFFKP--GNS 60

Query: 64  SNYYIGMWY--NKVSERTIVWVANREQPVSDRFSSVLNISDGNLVLFNESQLPIWSTNLT 121
           SNYYIGMWY  +KVS +TIVWVANRE PVSDRFSS L ISDGNL LFNES++ IWSTNL+
Sbjct: 61  SNYYIGMWYYRDKVSAQTIVWVANRETPVSDRFSSELRISDGNLALFNESKILIWSTNLS 120

Query: 122 ATSRRSVDAVLLDEGNLVLRDLSNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLT 181
           ++S RSV+AVL ++GNLVLRD SN    PLWQSFD PA TW+PG K+  +K NN +  L 
Sbjct: 121 SSSSRSVEAVLGNDGNLVLRDRSNPSLSPLWQSFDFPADTWLPGAKVGLSKINNRNTRLI 180

Query: 182 SWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGTWDDNAKIFSLVPEMTLNYIY 241
           SWK+K+NPAPGLFSLEL P+ S QY+I W RS QYW SG W  N +IFSLVPEM LNYIY
Sbjct: 181 SWKSKDNPAPGLFSLELDPNQS-QYLIFWKRSIQYWTSGEW--NGQIFSLVPEMRLNYIY 237

Query: 242 NFSYVSNENESYFTYNVKDSTYTSRFIMD 270
           NFSYVSN+NESYFTY++ +ST  SRF+MD
Sbjct: 238 NFSYVSNDNESYFTYSMYNSTVISRFVMD 266

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255544339|ref|XP_002513231.1| s-receptor kinase, putative [Ricinus communis] gi|223547605|gb|EEF49099.1| s-receptor kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225447699|ref|XP_002277219.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224126835|ref|XP_002319938.1| predicted protein [Populus trichocarpa] gi|222858314|gb|EEE95861.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255547271|ref|XP_002514693.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] gi|223546297|gb|EEF47799.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255547267|ref|XP_002514691.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] gi|223546295|gb|EEF47797.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356517594|ref|XP_003527472.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Glycine max] Back     alignment and taxonomy information
>gi|351721140|ref|NP_001235152.1| S-locus lectin protein kinase family protein precursor [Glycine max] gi|223452430|gb|ACM89542.1| S-locus lectin protein kinase family protein [Glycine max] gi|223452558|gb|ACM89606.1| S-locus lectin protein kinase family protein [Glycine max] Back     alignment and taxonomy information
>gi|357453591|ref|XP_003597073.1| Kinase-like protein [Medicago truncatula] gi|355486121|gb|AES67324.1| Kinase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356542117|ref|XP_003539517.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
TAIR|locus:2059103 828 AT2G19130 [Arabidopsis thalian 0.915 0.299 0.546 8e-69
TAIR|locus:2141181 850 RK3 "receptor kinase 3" [Arabi 0.911 0.290 0.397 6.6e-42
TAIR|locus:2018506 847 RK2 "receptor kinase 2" [Arabi 0.907 0.290 0.402 4.3e-39
TAIR|locus:2018546 843 RK1 "receptor kinase 1" [Arabi 0.911 0.293 0.387 5.1e-38
TAIR|locus:2141176 849 B120 [Arabidopsis thaliana (ta 0.926 0.295 0.345 5.2e-38
TAIR|locus:2088619 439 AT3G12000 [Arabidopsis thalian 0.940 0.580 0.359 7.2e-36
TAIR|locus:2131684 783 AT4G27290 [Arabidopsis thalian 0.907 0.314 0.347 1.3e-35
TAIR|locus:2200908 842 AT1G61610 [Arabidopsis thalian 0.940 0.302 0.324 4.2e-35
TAIR|locus:2197649 821 AT1G61360 [Arabidopsis thalian 0.797 0.263 0.366 3e-31
TAIR|locus:2197729 805 SD1-29 "S-domain-1 29" [Arabid 0.841 0.283 0.360 6e-31
TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 141/258 (54%), Positives = 180/258 (69%)

Query:    16 FTCFSLKSHVSFGADTISANQSLSGDQTIVSKXXXXXXXXXNPAPGKSSNYYIGMWYNKV 75
             F CF +  H S   DTIS + +LSGDQTIVS           P  G SSN+YIGMWY ++
Sbjct:    12 FICFFI--HGSSAVDTISGDFTLSGDQTIVSSDGTYEMGFFKP--GSSSNFYIGMWYKQL 67

Query:    76 SERTIVWVANREQPVSDRFSSVLNISDGNLVLFNES-QLPIWSTNLTATSRRS-VDAVLL 133
             S+ TI+WVANR++ VSD+ SSV  IS+GNL+L + + Q P+WST L +TS  S ++AVL 
Sbjct:    68 SQ-TILWVANRDKAVSDKNSSVFKISNGNLILLDGNYQTPVWSTGLNSTSSVSALEAVLQ 126

Query:   134 DEGNLVLRDLSNNLS-EPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPAPG 192
             D+GNLVLR   ++LS   LWQSFDHP  TW+PG+K+  +KR   SQ LTSWK+ E+P+PG
Sbjct:   127 DDGNLVLRTGGSSLSANVLWQSFDHPGDTWLPGVKIRLDKRTGKSQRLTSWKSLEDPSPG 186

Query:   193 LFSLELAPDGSNQYVILWNRSEQYWRSGTWDDNAKIFSLVPEMTLNYIYNFSYVSNENES 252
             LFSLEL  D S  Y ILWN S +YW SG W+  ++IF  VPEM LNYIYNFS+ SN  +S
Sbjct:   187 LFSLEL--DESTAYKILWNGSNEYWSSGPWNPQSRIFDSVPEMRLNYIYNFSFFSNTTDS 244

Query:   253 YFTYNVKDSTYTSRFIMD 270
             YFTY++ +    SRF+MD
Sbjct:   245 YFTYSIYNQLNVSRFVMD 262
GO:0004672 "protein kinase activity" evidence=IEA;ISS
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0048544 "recognition of pollen" evidence=IEA
TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088619 AT3G12000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197649 AT1G61360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2197729 SD1-29 "S-domain-1 29" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00191044
hypothetical protein (824 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
pfam01453109 pfam01453, B_lectin, D-mannose binding lectin 7e-31
cd00028116 cd00028, B_lectin, Bulb-type mannose-specific lect 3e-30
smart00108114 smart00108, B_lectin, Bulb-type mannose-specific l 2e-28
pfam00954110 pfam00954, S_locus_glycop, S-locus glycoprotein fa 1e-10
>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin Back     alignment and domain information 
 Score =  110 bits (278), Expect = 7e-31
 Identities = 52/115 (45%), Positives = 69/115 (60%), Gaps = 7/115 (6%)

Query: 77  ERTIVWVANREQPVSDRFSSVLNIS-DGNLVLFNESQLPIWSTNLTATSRRSVDAVLLDE 135
            +T+VWVANR  P++D  S  L +  DGNLVL++ +   +WS+N T+       AVL D+
Sbjct: 1   NQTVVWVANRLNPLTDS-SYTLILQSDGNLVLYDGNGRVVWSSN-TSGKGSGCVAVLQDD 58

Query: 136 GNLVLRDLSNNLSEPLWQSFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPA 190
           GNLVL D S      LWQSFDHP  T +PG K   N     S+ LTSWK+  +P+
Sbjct: 59  GNLVLYDNSGK---VLWQSFDHPTDTLLPGQKDG-NVVIGGSRRLTSWKSNTDPS 109

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109
>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information
>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information
>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 271
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 99.96
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 99.94
smart00108114 B_lectin Bulb-type mannose-specific lectin. 99.93
smart00108114 B_lectin Bulb-type mannose-specific lectin. 98.92
PF00954110 S_locus_glycop: S-locus glycoprotein family; Inter 98.87
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 98.78
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 98.72
KOG4649354 consensus PQQ (pyrrolo-quinoline quinone) repeat p 86.47
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information 
Probab=99.96  E-value=2.1e-30  Score=207.60  Aligned_cols=111  Identities=42%  Similarity=0.711  Sum_probs=79.9

Q ss_pred             CCcEEEEcCCCCCCCCC-CceEEEEe-CCeEEEEcCCCCeEEee-ccCCCCCCceeEEEecCCCeeEEecCCCCCcceee
Q 036022           77 ERTIVWVANREQPVSDR-FSSVLNIS-DGNLVLFNESQLPIWST-NLTATSRRSVDAVLLDEGNLVLRDLSNNLSEPLWQ  153 (271)
Q Consensus        77 ~~tvVW~Anr~~p~~~~-~~~~L~l~-dG~Lvl~d~~~~~vWss-~~~~~~~~~~~~~Lld~GNLVl~~~~~~~~~~lWq  153 (271)
                      ++++||+|||++|+... ..++|.|+ ||+|+|+|..++++|++ ++.+.....+.|+|+|+|||||++..+   .+|||
T Consensus         1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~---~~lW~   77 (114)
T PF01453_consen    1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSG---NVLWQ   77 (114)
T ss_dssp             ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTS---EEEEE
T ss_pred             CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecc---eEEEe
Confidence            36899999999999531 25899999 99999999998999999 665542247999999999999999654   79999


Q ss_pred             cccCCcccccccceeeeeeccCcceEEEeeCCCCCCC
Q 036022          154 SFDHPAHTWIPGMKLTFNKRNNVSQLLTSWKNKENPA  190 (271)
Q Consensus       154 SFd~PtDTlLpg~~l~~~~~tg~~~~L~S~~s~~dps  190 (271)
                      ||+||+||+||+|+|+.+..+|....++||++.+|||
T Consensus        78 Sf~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   78 SFDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             STTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             ecCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            9999999999999999877777667799999999996

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation Back     alignment and domain information
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
1kj1_A109 Lectin I, lecgna 1; BULB lectin, mannose, plant pr 4e-11
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 2e-09
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 2e-07
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 4e-07
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 4e-07
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 6e-07
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 4e-06
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 2e-05
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 3e-05
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 4e-05
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 3e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 9e-04
>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 Back     alignment and structure
 Score = 57.9 bits (140), Expect = 4e-11
 Identities = 20/128 (15%), Positives = 46/128 (35%), Gaps = 21/128 (16%)

Query: 30  DTISANQSLSGDQTIVSKGGVFVFGFFNPAPGKSSNYYIGMWYNKVSERTIVWVANREQP 89
           + ++  + L   Q++  +   F+             Y               W +N    
Sbjct: 2   NLLTNGEGLYAGQSLDVEPYHFIMQE----DCNLVLYDHSTSV---------WASNTGIL 48

Query: 90  VSDRFSSVLNISDGNLVLFNESQLPIWSTNLTATSRRSVDAVLLDEGNLVLRDLSNNLSE 149
                 +VL  SDGN V+++     +W+++ +     +   VL ++GN+V+         
Sbjct: 49  GKKGCKAVLQ-SDGNFVVYDAEGRSLWASH-SVRGNGNYVLVLQEDGNVVIYG------S 100

Query: 150 PLWQSFDH 157
            +W +  +
Sbjct: 101 DIWSTGTY 108
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109 Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110 Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276 Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119 Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113 Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query271
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 100.0
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 100.0
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 99.9
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.87
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.87
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.85
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.84
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.83
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 99.77
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.76
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.74
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 99.73
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.72
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.68
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.67
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.65
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.5
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.44
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 99.43
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.38
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 99.33
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 99.3
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 99.28
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 98.93
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
Probab=100.00  E-value=7.1e-43  Score=317.56  Aligned_cols=214  Identities=21%  Similarity=0.248  Sum_probs=164.7

Q ss_pred             ccccccccCCCCcccCCCEEEecCCeEEEEEEcCCCCCCCceEEEEEEeecCCCcEEEEcCCCCCCCCC---CceEEEEe
Q 036022           25 VSFGADTISANQSLSGDQTIVSKGGVFVFGFFNPAPGKSSNYYIGMWYNKVSERTIVWVANREQPVSDR---FSSVLNIS  101 (271)
Q Consensus        25 ~~~~~d~l~~g~~L~~~~~LvS~~g~F~lgF~~~~~~~~~~~~lgIwy~~~~~~tvVW~Anr~~p~~~~---~~~~L~l~  101 (271)
                      +|++.|+|.+|++|+.|++|+|++|.|+||||.++     ++||   |+  +.+ +||+|||++|+.++   .+++|+|+
T Consensus        10 ~~~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~-----~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~   78 (276)
T 3m7h_A           10 NGVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG-----NLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLA   78 (276)
T ss_dssp             CCTTSSEECTTEEBCTTCEEECTTSSEEEEECTTS-----CEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSE
T ss_pred             ccccCCEecCCCEecCCCEEEcCCCcEEEEEECCC-----CeEE---EC--CCC-eEEECCCCCCcCCcccccceEEEEe
Confidence            56778999999999999999999999999999432     5676   76  666 99999999999752   16789999


Q ss_pred             -CCeEEE--EcCCCCeEEeeccCCCC----CCceeEEEecCCCeeEEecCCCCCcceeecccCCcccccccceeeeeecc
Q 036022          102 -DGNLVL--FNESQLPIWSTNLTATS----RRSVDAVLLDEGNLVLRDLSNNLSEPLWQSFDHPAHTWIPGMKLTFNKRN  174 (271)
Q Consensus       102 -dG~Lvl--~d~~~~~vWss~~~~~~----~~~~~~~Lld~GNLVl~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~~~t  174 (271)
                       ||+|+|  .|+++.+||++++....    .+++.|+|+|+|||||++  +   .+||||  |||||+||||+++.++.+
T Consensus        79 ~~G~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~--~---~~lWqS--~ptdtlLpg~~~~~~l~~  151 (276)
T 3m7h_A           79 FYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD--S---LALWNG--TPAIPLVPGAIDSLLLAP  151 (276)
T ss_dssp             EEESSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE--E---EEEEES--CTTSCCCCSCTTCEEECS
T ss_pred             CCCcEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC--C---ceeeCc--cccccccccccccccccc
Confidence             999999  78888999999976421    246899999999999998  3   689999  999999999999999988


Q ss_pred             CcceEEEeeCCCCCCCCeeeEEEeCCCCCceeEEeecCCeeeEEecccCCCCceeeecccccceeeEEEEEEEcC-CeEE
Q 036022          175 NVSQLLTSWKNKENPAPGLFSLELAPDGSNQYVILWNRSEQYWRSGTWDDNAKIFSLVPEMTLNYIYNFSYVSNE-NESY  253 (271)
Q Consensus       175 g~~~~L~S~~s~~dps~G~ysl~~~~~g~~~~~l~~~~~~~yw~sG~w~~ng~~fs~ip~~~~~~~~~f~~v~~~-~e~~  253 (271)
                      |  +.|   ++..||++|.|+++|+++|.  +++.+++..+||++|+|  ++...    .+.......+.+.+++ .+++
T Consensus       152 g--~~L---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~yW~Sgt~--~~~~~----~l~l~~dGnLvl~d~~~~~vW  218 (276)
T 3m7h_A          152 G--SEL---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAATWNAGTQ--GKGAV----RAVFQGDGNLVVYGAGNAVLW  218 (276)
T ss_dssp             S--EEE---CTTCEEEETTEEEEECTTSC--EEEECTTSSEEEECCCT--TTTCC----EEEECTTSCEEEECTTSCEEE
T ss_pred             C--ccc---ccCCCCCCceEEEeecCCce--EEEEeCCCeEEEECCCC--CCccE----EEEEcCCCeEEEEeCCCcEEE
Confidence            6  456   56899999999999999985  67634456899999999  65421    1111112233334443 3555


Q ss_pred             EEEEeCCCCcEEEEEEcC
Q 036022          254 FTYNVKDSTYTSRFIMDF  271 (271)
Q Consensus       254 ~~~~~~~~~~~~r~~Ld~  271 (271)
                      +++...  ....|++|+.
T Consensus       219 sS~t~~--~~~~rl~Ld~  234 (276)
T 3m7h_A          219 HSHTGG--HASAVLRLQA  234 (276)
T ss_dssp             ECSCTT--CTTCEEEECT
T ss_pred             EecCCC--CCCEEEEEcC
Confidence            544322  2246787763
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 271
d1kj1a_109 b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium 2e-15
d1dlpa2120 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet 4e-12
d1jpca_108 b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan 6e-10
d1xd5a_112 b.78.1.1 (A:) Gastrodianin (antifungal protein) {G 3e-09
d1dlpa1115 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p 6e-07
d1b2pa_119 b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill 3e-05
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 Back     information, alignment and structure

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 68.1 bits (166), Expect = 2e-15
 Identities = 22/128 (17%), Positives = 50/128 (39%), Gaps = 21/128 (16%)

Query: 30  DTISANQSLSGDQTIVSKGGVFVFGFFNPAPGKSSNYYIGMWYNKVSERTIVWVANREQP 89
           + ++  + L   Q++      + F              + ++ +     T VW +N    
Sbjct: 2   NLLTNGEGLYAGQSLDV--EPYHFIMQED-------CNLVLYDHS----TSVWASNTGIL 48

Query: 90  VSDRFSSVLNISDGNLVLFNESQLPIWSTNLTATSRRSVDAVLLDEGNLVLRDLSNNLSE 149
                 +VL  SDGN V+++     +W+++    +   V  VL ++GN+V+         
Sbjct: 49  GKKGCKAVLQ-SDGNFVVYDAEGRSLWASHSVRGNGNYV-LVLQEDGNVVIYG------S 100

Query: 150 PLWQSFDH 157
            +W +  +
Sbjct: 101 DIWSTGTY 108
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115 Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query271
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 99.89
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 99.88
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 99.87
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 99.74
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 99.73
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.67
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.54
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 99.39
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 99.3
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 99.25
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 99.22
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 99.1
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.89  E-value=4e-23  Score=161.47  Aligned_cols=111  Identities=23%  Similarity=0.511  Sum_probs=92.9

Q ss_pred             ccccCCCCcccCCCEEEecCCeEEEEEEcCCCCCCCceEEEEEEeecCCCcEEEEcCCCCCCCCCCceEEEEe-CCeEEE
Q 036022           29 ADTISANQSLSGDQTIVSKGGVFVFGFFNPAPGKSSNYYIGMWYNKVSERTIVWVANREQPVSDRFSSVLNIS-DGNLVL  107 (271)
Q Consensus        29 ~d~l~~g~~L~~~~~LvS~~g~F~lgF~~~~~~~~~~~~lgIwy~~~~~~tvVW~Anr~~p~~~~~~~~L~l~-dG~Lvl  107 (271)
                      +|+|.+||.|..|+.|++  |.|+|.||.+++     +.  + |.   ..++||.|+++.|..   ++.|+|+ ||+|+|
T Consensus         1 tDtL~~gq~L~~g~~l~~--g~~~l~~q~DGN-----Lv--l-y~---~~~~vW~s~~~~~~~---~~~l~l~~dGnLvl   64 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LV--L-YD---NNRAVWASGTNGKAS---GCVLKMQNDGNLVI   64 (112)
T ss_dssp             CCEEETTEEECTTCEEEE--TTEEEEECTTSC-----EE--E-EE---TTEEEEECCCTTSCS---SEEEEECTTSCEEE
T ss_pred             CCEecCCCEecCCCEEEE--CCEEEEEcCCCC-----EE--E-Ec---CCcEEEEccCccCCC---CcEEEEeccccEEE
Confidence            489999999999999985  899999998764     33  3 33   568999999998754   5789999 999999


Q ss_pred             EcCCCCeEEeeccCCCCCCceeEEEecCCCeeEEecCCCCCcceeecccCCcc
Q 036022          108 FNESQLPIWSTNLTATSRRSVDAVLLDEGNLVLRDLSNNLSEPLWQSFDHPAH  160 (271)
Q Consensus       108 ~d~~~~~vWss~~~~~~~~~~~~~Lld~GNLVl~~~~~~~~~~lWqSFd~PtD  160 (271)
                      +|. +.++|++++.... +...|+|+|+|||||++..+   .++|||+.||+|
T Consensus        65 ~~~-~~~~w~s~t~~~~-~~~~l~L~ddGNlvly~~~~---~~~W~S~t~~~n  112 (112)
T d1xd5a_          65 YSG-SRAIWASNTNRQN-GNYYLILQRDRNVVIYDNSN---NAIWATHTNVGN  112 (112)
T ss_dssp             EET-TEEEEECCCCCSC-CCCEEEECTTSCEEEECTTS---CEEEECCCCCCC
T ss_pred             Eec-CCeEEEEeeccCC-CceEEEEcCCCCEEEECCCC---cEEecCCCccCC
Confidence            997 5678888776543 56789999999999998764   689999999985
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure