Citrus Sinensis ID: 036064
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1044 | 2.2.26 [Sep-21-2011] | |||||||
| O49323 | 1036 | Cellulose synthase-like p | yes | no | 0.979 | 0.987 | 0.782 | 0.0 | |
| A2YCI3 | 1012 | Putative cellulose syntha | N/A | no | 0.937 | 0.967 | 0.698 | 0.0 | |
| Q5Z6E5 | 1012 | Cellulose synthase-like p | yes | no | 0.934 | 0.964 | 0.702 | 0.0 | |
| Q9LFL0 | 1145 | Cellulose synthase-like p | no | no | 0.886 | 0.807 | 0.694 | 0.0 | |
| Q9M9M4 | 1145 | Cellulose synthase-like p | no | no | 0.882 | 0.804 | 0.684 | 0.0 | |
| Q9SZL9 | 1111 | Cellulose synthase-like p | no | no | 0.849 | 0.798 | 0.701 | 0.0 | |
| A2YU42 | 1170 | Cellulose synthase-like p | N/A | no | 0.882 | 0.787 | 0.674 | 0.0 | |
| Q9LHZ7 | 1170 | Cellulose synthase-like p | no | no | 0.882 | 0.787 | 0.674 | 0.0 | |
| Q8W3F9 | 1127 | Cellulose synthase-like p | no | no | 0.876 | 0.811 | 0.669 | 0.0 | |
| A2ZAK8 | 1127 | Cellulose synthase-like p | N/A | no | 0.876 | 0.811 | 0.669 | 0.0 |
| >sp|O49323|CSLD1_ARATH Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1 | Back alignment and function desciption |
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Score = 1726 bits (4470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 819/1047 (78%), Positives = 924/1047 (88%), Gaps = 24/1047 (2%)
Query: 5 TSPKKSSLSKQTSTAGRPPQAVKFARRSSSGRVVSLSREEDLDMSGDYSGQNDYINYTVL 64
+SP K +L+ Q+S+ RPPQAVKF RR+SSGR+VSLSR++D+D+SGDYSGQNDYINYTVL
Sbjct: 3 SSPPKKTLNSQSSSLSRPPQAVKFGRRTSSGRIVSLSRDDDMDVSGDYSGQNDYINYTVL 62
Query: 65 MPPTPDNQPSGQDSDSKPDGPSQYQTSRFGPSDARRGQGEGGSGGSGGNSGAKMERRMSV 124
MPPTPDNQP+G + S+++ GG GG G G K+ERR+SV
Sbjct: 63 MPPTPDNQPAGSSGST---------------SESKGDANRGGGGGDGPKMGNKLERRLSV 107
Query: 125 MKSNNKSMLLRSQTGDFDHNRWLFETKGKYGIGNAFWSPSEEDGYGPDVSMSDFMDKPWK 184
MKSNNKSMLLRSQTGDFDHNRWLFE+KGKYGIGNAFWS E+D Y VS SDF+DKPWK
Sbjct: 108 MKSNNKSMLLRSQTGDFDHNRWLFESKGKYGIGNAFWS-EEDDTYDGGVSKSDFLDKPWK 166
Query: 185 PLTRKIKVPAQILSPYRVLIIMRLVALFFFMLWRVQNPNEDAMWLWGISIVCEIWFAFSW 244
PLTRK+++PA+ILSPYR+LI++RLV +FFF+ WR+ NPNEDAMWLWG+SIVCEIWFAFSW
Sbjct: 167 PLTRKVQIPAKILSPYRLLIVIRLVIVFFFLWWRITNPNEDAMWLWGLSIVCEIWFAFSW 226
Query: 245 ILDILPKLNPVHRSTDLQALKEKFETPSAANPQGRSDLPGVDVFVSTADPEKEPPLVTAN 304
ILDILPKLNP++R+TDL AL +KFE PS +NP GRSDLPGVDVFVSTADPEKEPPLVTAN
Sbjct: 227 ILDILPKLNPINRATDLAALHDKFEQPSPSNPTGRSDLPGVDVFVSTADPEKEPPLVTAN 286
Query: 305 TILSILAAEYPIEKLSAYISDDGGAILTFEAMAEAVRFAEVWVPFCRKHNIEPRNPDSYF 364
T+LSILA +YPIEKLSAYISDDGGAILTFEAMAEAVRFAE WVPFCRKH+IEPRNPDSYF
Sbjct: 287 TLLSILAVDYPIEKLSAYISDDGGAILTFEAMAEAVRFAEYWVPFCRKHDIEPRNPDSYF 346
Query: 365 SIKGDPTRNKKRPDFVKDRRWIKREYDEFKVRINGLPEVIRRRAEAYNNRERMKEKALAM 424
SIK DPT+NKKR DFVKDRRWIKREYDEFKVRINGLPE I++RAE +N RE +KEK +A
Sbjct: 347 SIKKDPTKNKKRQDFVKDRRWIKREYDEFKVRINGLPEQIKKRAEQFNMREELKEKRIAR 406
Query: 425 EKNGGSAPKEPINVTKATWMADGTHWPGTWLHPTADHAKGDHAGILQVMSKVPENDPVMG 484
EKNGG P + + V KATWMADGTHWPGTW P DH+KGDHAGILQ+MSKVP+ +PVMG
Sbjct: 407 EKNGGVLPPDGVEVVKATWMADGTHWPGTWFEPKPDHSKGDHAGILQIMSKVPDLEPVMG 466
Query: 485 YPDEKRLDFTGVDIRIPMFAYVSREKRKGYDHQKKAGAMNGMVRASAILSNGPFILNLDC 544
P+E LDFTG+DIR+PMFAYVSREKR G+DH KKAGAMNGMVRASAILSNG FILNLDC
Sbjct: 467 GPNEGALDFTGIDIRVPMFAYVSREKRPGFDHNKKAGAMNGMVRASAILSNGAFILNLDC 526
Query: 545 DHYIYNSLAIREGMCFMMDRGGDRICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDG 604
DHYIYNS AI+EGMCFMMDRGGDRICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDG
Sbjct: 527 DHYIYNSKAIKEGMCFMMDRGGDRICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDG 586
Query: 605 IQGPFYVGTGCMFRRYALYGFNPPRANEYIGVIGQKKAKAGHIPPRTD--------DDDS 656
+QGP YVGTGCMFRRYALYGFNPPRANEY GV GQ+KA A H+ ++ D +S
Sbjct: 587 LQGPVYVGTGCMFRRYALYGFNPPRANEYSGVFGQEKAPAMHVRTQSQASQTSQASDLES 646
Query: 657 DTRPLTSHPDLDLPRKFGNSTMFNESIAVAEYQGRPLADHISVKNGRPPGSLLVPRPPLD 716
DT+PL PDL LP+KFGNSTMF ++I VAEYQGRPLADH+SVKNGRPPG+LL+PRPPLD
Sbjct: 647 DTQPLNDDPDLGLPKKFGNSTMFTDTIPVAEYQGRPLADHMSVKNGRPPGALLLPRPPLD 706
Query: 717 APTVAEAVAVISCWYEDKTEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFR 776
APTVAEA+AVISCWYED TEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYC+TKRDAFR
Sbjct: 707 APTVAEAIAVISCWYEDNTEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFR 766
Query: 777 GSAPINLTDRLHQVLRWATGSVEIFFSRNNAILGTRRLKFLQRMAYLNTGIYPFTSIFLV 836
G+APINLTDRLHQVLRWATGSVEIFFS+NNA+ TRRLKFLQR+AYLN GIYPFTSIFLV
Sbjct: 767 GTAPINLTDRLHQVLRWATGSVEIFFSKNNAMFATRRLKFLQRVAYLNVGIYPFTSIFLV 826
Query: 837 TYCFLPAMCHFSGKFIVPNLNIAFLCYLLTITVTLTLISLLEVKWSGIGLEEWWRNEQFW 896
YCFLPA+C FSGKFIV +L+I FL YLL ITVTLTLISLLEVKWSGIGLEEWWRNEQFW
Sbjct: 827 VYCFLPALCLFSGKFIVQSLDIHFLSYLLCITVTLTLISLLEVKWSGIGLEEWWRNEQFW 886
Query: 897 VIGGSSAHLAAVLQGLLKVIAGIEISFTLTTKSAAEDDEDMYADLYIIKWTSLFIVPLTI 956
+IGG+SAHLAAV+QGLLKVIAGIEISFTLT+K++ ED++D++ADLYI+KWT LFI+PLTI
Sbjct: 887 LIGGTSAHLAAVVQGLLKVIAGIEISFTLTSKASGEDEDDIFADLYIVKWTGLFIMPLTI 946
Query: 957 IVVNIVALVIGASRTIYSVLPQWGKLLGGSFFSFWVLAHMYPFCKGLMGRRGKLPTIIYV 1016
I+VN+VA+VIGASRTIYSV+PQWGKL+GG FFS WVL HMYPF KGLMGRRGK+PTI+YV
Sbjct: 947 IIVNLVAIVIGASRTIYSVIPQWGKLMGGIFFSLWVLTHMYPFAKGLMGRRGKVPTIVYV 1006
Query: 1017 WTGLLSITLSLIWVTVSPPDKTNEMEG 1043
W+GL+SIT+SL+W+T+SPPD + G
Sbjct: 1007 WSGLVSITVSLLWITISPPDDVSGSGG 1033
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Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: - |
| >sp|A2YCI3|CSLD5_ORYSI Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q5Z6E5|CSLD5_ORYSJ Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9LFL0|CSLD2_ARATH Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9M9M4|CSLD3_ARATH Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9SZL9|CSLD4_ARATH Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2YU42|CSLD2_ORYSI Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9LHZ7|CSLD2_ORYSJ Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8W3F9|CSLD1_ORYSJ Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2ZAK8|CSLD1_ORYSI Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1044 | ||||||
| 255554164 | 1059 | Cellulose synthase A catalytic subunit 1 | 0.984 | 0.970 | 0.803 | 0.0 | |
| 449433187 | 1047 | PREDICTED: cellulose synthase-like prote | 0.983 | 0.980 | 0.786 | 0.0 | |
| 297826757 | 1036 | hypothetical protein ARALYDRAFT_482247 [ | 0.979 | 0.987 | 0.785 | 0.0 | |
| 15225793 | 1036 | cellulose synthase-like protein D1 [Arab | 0.979 | 0.987 | 0.782 | 0.0 | |
| 224075617 | 1025 | predicted protein [Populus trichocarpa] | 0.978 | 0.997 | 0.777 | 0.0 | |
| 429326504 | 1025 | cellulose synthase-like protein [Populus | 0.978 | 0.997 | 0.777 | 0.0 | |
| 225451330 | 1043 | PREDICTED: cellulose synthase-like prote | 0.970 | 0.971 | 0.796 | 0.0 | |
| 429326506 | 1032 | cellulose synthase-like protein [Populus | 0.984 | 0.996 | 0.773 | 0.0 | |
| 224053430 | 1032 | predicted protein [Populus trichocarpa] | 0.982 | 0.994 | 0.772 | 0.0 | |
| 147854706 | 1003 | hypothetical protein VITISV_002604 [Viti | 0.931 | 0.970 | 0.770 | 0.0 |
| >gi|255554164|ref|XP_002518122.1| Cellulose synthase A catalytic subunit 1 [UDP-forming], putative [Ricinus communis] gi|223542718|gb|EEF44255.1| Cellulose synthase A catalytic subunit 1 [UDP-forming], putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1750 bits (4533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 839/1044 (80%), Positives = 942/1044 (90%), Gaps = 16/1044 (1%)
Query: 5 TSPKKSSLSKQTSTAGRPPQAVKFARRSSSGRVVSLSREEDLDMSGDYSGQNDYINYTVL 64
+ PK+ SLS Q+S+AGRPPQAVKFARR+SSGR++SLSR++DLDMS ++SGQNDYINYTV+
Sbjct: 6 SRPKEKSLSSQSSSAGRPPQAVKFARRTSSGRIMSLSRDDDLDMSNEFSGQNDYINYTVM 65
Query: 65 MPPTPDNQPSGQDSDSKPDGPSQYQ-TSRFGPSDA------RRGQGEGG----SGGSGGN 113
MPPTPDNQP+G SD+KPDGPS Y TSRFGP A R G+ EG GGN
Sbjct: 66 MPPTPDNQPAGPSSDNKPDGPSAYGGTSRFGPETASQRMSRRIGEEEGNYGGNGSDDGGN 125
Query: 114 SGAKMERRMSVMKSNNKSMLLRSQTGDFDHNRWLFETKGKYGIGNAFWSPSEEDGYGPD- 172
+ +K+ERRMS+MKSNNKSMLLRSQT DFDHNRWLFETKG YG+GNA+W+ EED YGPD
Sbjct: 126 NSSKLERRMSIMKSNNKSMLLRSQTQDFDHNRWLFETKGTYGVGNAYWT--EEDTYGPDT 183
Query: 173 -VSMSDFMDKPWKPLTRKIKVPAQILSPYRVLIIMRLVALFFFMLWRVQNPNEDAMWLWG 231
+SMSDFMDKPWKPLTRK+KV + ILSPYR+LI++R+V L FF+ WRVQNPN DAMWLWG
Sbjct: 184 GLSMSDFMDKPWKPLTRKVKVSSAILSPYRILIVIRMVVLSFFLAWRVQNPNRDAMWLWG 243
Query: 232 ISIVCEIWFAFSWILDILPKLNPVHRSTDLQALKEKFETPSAANPQGRSDLPGVDVFVST 291
ISIVCEIWFAFSWILDILPKLNP++R+TDL AL++KFE PS +NP RSDLPGVD+F+ST
Sbjct: 244 ISIVCEIWFAFSWILDILPKLNPINRATDLAALRDKFEKPSPSNPTARSDLPGVDIFIST 303
Query: 292 ADPEKEPPLVTANTILSILAAEYPIEKLSAYISDDGGAILTFEAMAEAVRFAEVWVPFCR 351
ADPEKEPPLVTANTILSILA +YP+EK+S YISDDGGAILTFEAMAEAVRFAEVWVPFCR
Sbjct: 304 ADPEKEPPLVTANTILSILAVDYPVEKVSGYISDDGGAILTFEAMAEAVRFAEVWVPFCR 363
Query: 352 KHNIEPRNPDSYFSIKGDPTRNKKRPDFVKDRRWIKREYDEFKVRINGLPEVIRRRAEAY 411
KH+IEPRNPDSYF++K DPT+NKKRPDFVKDRRWIKREYDEFKVRINGLPE IRRR+++Y
Sbjct: 364 KHDIEPRNPDSYFNLKTDPTKNKKRPDFVKDRRWIKREYDEFKVRINGLPETIRRRSDSY 423
Query: 412 NNRERMKEKALAMEKNGGSAPKEPINVTKATWMADGTHWPGTWLHPTADHAKGDHAGILQ 471
N +E KEK+LA EKNGG P E + V KA+WMADGTHWPGTWL+PTADHAKGDHAGILQ
Sbjct: 424 NKKEEKKEKSLAREKNGGMLPAEGVTVPKASWMADGTHWPGTWLNPTADHAKGDHAGILQ 483
Query: 472 VMSKVPENDPVMGYPDEKRLDFTGVDIRIPMFAYVSREKRKGYDHQKKAGAMNGMVRASA 531
+MSKVPE+DPV+G+PDEK+LDFTGVDIRIPMFAYVSREKR GYDH KKAGAMN MVRASA
Sbjct: 484 IMSKVPESDPVLGHPDEKKLDFTGVDIRIPMFAYVSREKRPGYDHNKKAGAMNAMVRASA 543
Query: 532 ILSNGPFILNLDCDHYIYNSLAIREGMCFMMDRGGDRICYIQFPQRFEGIDPSDRYANHN 591
ILSNGPFILNLDCDHYIYN AIREGMCFMMDRGGDRICYIQFPQRFEGIDPSDRYANHN
Sbjct: 544 ILSNGPFILNLDCDHYIYNCQAIREGMCFMMDRGGDRICYIQFPQRFEGIDPSDRYANHN 603
Query: 592 TVFFDGNMRALDGIQGPFYVGTGCMFRRYALYGFNPPRANEYIGVIGQKKAKAGHIPPRT 651
VFFDG+MRALDG+QGP YVGTGCMFRRYALYGF PPRANEY G+ GQ+KAKA + ++
Sbjct: 604 FVFFDGSMRALDGLQGPVYVGTGCMFRRYALYGFLPPRANEYSGIFGQEKAKASRLQAQS 663
Query: 652 DDDDSDTRPLTSHPDLDLPRKFGNSTMFNESIAVAEYQGRPLADHISVKNGRPPGSLLVP 711
DDDS+T+PLTSHPDL+LP+KFGNS MFNESIAVAEYQGRPLADH+SVKNGRPPG+LLVP
Sbjct: 664 -DDDSETQPLTSHPDLNLPKKFGNSVMFNESIAVAEYQGRPLADHVSVKNGRPPGALLVP 722
Query: 712 RPPLDAPTVAEAVAVISCWYEDKTEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTK 771
RPPLDAPTVAEAVAVISCWYEDKTEWG++IGWIYGSVTEDVVTGYRMHNRGWRS+YC+TK
Sbjct: 723 RPPLDAPTVAEAVAVISCWYEDKTEWGEKIGWIYGSVTEDVVTGYRMHNRGWRSIYCITK 782
Query: 772 RDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAILGTRRLKFLQRMAYLNTGIYPFT 831
RDAFRGSAPINLTDRLHQVLRWATGSVEIFFS+NNA L +RRLKFLQR+AYLN G+YPFT
Sbjct: 783 RDAFRGSAPINLTDRLHQVLRWATGSVEIFFSKNNAFLASRRLKFLQRIAYLNVGMYPFT 842
Query: 832 SIFLVTYCFLPAMCHFSGKFIVPNLNIAFLCYLLTITVTLTLISLLEVKWSGIGLEEWWR 891
S FLVTYCFLPA+ SG FIV +LNIAFL YLL ITVTLTLISLLEVKWSGIGLEEWWR
Sbjct: 843 SFFLVTYCFLPALSLISGHFIVSSLNIAFLSYLLIITVTLTLISLLEVKWSGIGLEEWWR 902
Query: 892 NEQFWVIGGSSAHLAAVLQGLLKVIAGIEISFTLTTKSAAEDDEDMYADLYIIKWTSLFI 951
NEQFW IGG+SAH AVLQGLLKVIAGIEISF LT+KSA ED++D +ADLY++KWTSLFI
Sbjct: 903 NEQFWAIGGTSAHFVAVLQGLLKVIAGIEISFKLTSKSAGEDEDDAFADLYMVKWTSLFI 962
Query: 952 VPLTIIVVNIVALVIGASRTIYSVLPQWGKLLGGSFFSFWVLAHMYPFCKGLMGRRGKLP 1011
+PL II+ NI+A+VIG SRTIYSV+PQWGKL+GG FFSFWVLAHMYPF KGL+GRRG++P
Sbjct: 963 MPLAIILCNIIAIVIGVSRTIYSVIPQWGKLIGGCFFSFWVLAHMYPFIKGLLGRRGRVP 1022
Query: 1012 TIIYVWTGLLSITLSLIWVTVSPP 1035
TIIYVW G+LSIT+SL+ +++ PP
Sbjct: 1023 TIIYVWAGILSITVSLLMISIDPP 1046
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|449433187|ref|XP_004134379.1| PREDICTED: cellulose synthase-like protein D1-like [Cucumis sativus] gi|449518589|ref|XP_004166319.1| PREDICTED: cellulose synthase-like protein D1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297826757|ref|XP_002881261.1| hypothetical protein ARALYDRAFT_482247 [Arabidopsis lyrata subsp. lyrata] gi|297327100|gb|EFH57520.1| hypothetical protein ARALYDRAFT_482247 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|15225793|ref|NP_180869.1| cellulose synthase-like protein D1 [Arabidopsis thaliana] gi|75219583|sp|O49323.1|CSLD1_ARATH RecName: Full=Cellulose synthase-like protein D1; Short=AtCslD1 gi|2924781|gb|AAC04910.1| putative cellulose synthase [Arabidopsis thaliana] gi|330253691|gb|AEC08785.1| cellulose synthase-like protein D1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|224075617|ref|XP_002304709.1| predicted protein [Populus trichocarpa] gi|222842141|gb|EEE79688.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|429326504|gb|AFZ78592.1| cellulose synthase-like protein [Populus tomentosa] | Back alignment and taxonomy information |
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| >gi|225451330|ref|XP_002274474.1| PREDICTED: cellulose synthase-like protein D1-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|429326506|gb|AFZ78593.1| cellulose synthase-like protein [Populus tomentosa] | Back alignment and taxonomy information |
|---|
| >gi|224053430|ref|XP_002297815.1| predicted protein [Populus trichocarpa] gi|222845073|gb|EEE82620.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|147854706|emb|CAN81744.1| hypothetical protein VITISV_002604 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1044 | ||||||
| TAIR|locus:2046505 | 1036 | CSLD1 "AT2G33100" [Arabidopsis | 0.964 | 0.972 | 0.752 | 0.0 | |
| TAIR|locus:2148171 | 1145 | CSLD2 "AT5G16910" [Arabidopsis | 0.885 | 0.806 | 0.681 | 0.0 | |
| TAIR|locus:2097700 | 1145 | CSLD3 "AT3G03050" [Arabidopsis | 0.886 | 0.807 | 0.670 | 0.0 | |
| TAIR|locus:2121080 | 1111 | CSLD4 "AT4G38190" [Arabidopsis | 0.852 | 0.801 | 0.687 | 0.0 | |
| UNIPROTKB|Q2QNS6 | 1215 | CSLD4 "Cellulose synthase-like | 0.502 | 0.432 | 0.602 | 0.0 | |
| TAIR|locus:2031740 | 979 | CSLD6 "AT1G32180" [Arabidopsis | 0.813 | 0.867 | 0.613 | 2.8e-304 | |
| TAIR|locus:2024745 | 1181 | CSLD5 "AT1G02730" [Arabidopsis | 0.779 | 0.689 | 0.639 | 4.4e-299 | |
| TAIR|locus:2136308 | 1084 | CESA2 "cellulose synthase A2" | 0.307 | 0.296 | 0.533 | 1.6e-220 | |
| TAIR|locus:2178935 | 1026 | IRX3 "IRREGULAR XYLEM 3" [Arab | 0.305 | 0.310 | 0.553 | 1.4e-219 | |
| TAIR|locus:2178193 | 1069 | CESA5 "cellulose synthase 5" [ | 0.300 | 0.293 | 0.548 | 1.2e-218 |
| TAIR|locus:2046505 CSLD1 "AT2G33100" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4195 (1481.8 bits), Expect = 0., P = 0.
Identities = 776/1031 (75%), Positives = 863/1031 (83%)
Query: 21 RPPQAVKFAXXXXXXXXXXXXXEEDLDMSGDYSGQNDYINYTVLMPPTPDNQPSGQDSDS 80
RPPQAVKF ++D+D+SGDYSGQNDYINYTVLMPPTPDNQP+G
Sbjct: 19 RPPQAVKFGRRTSSGRIVSLSRDDDMDVSGDYSGQNDYINYTVLMPPTPDNQPAG----- 73
Query: 81 KPDGPSQYQTSRFGPSDARRXXXXXXXXXXXXXXXAKMERRMSVMKSNNKSMLLRSQTGD 140
S TS DA R K+ERR+SVMKSNNKSMLLRSQTGD
Sbjct: 74 -----SSGSTSE-SKGDANRGGGGGDGPKMGN----KLERRLSVMKSNNKSMLLRSQTGD 123
Query: 141 FDHNRWLFETKGKYGIGNAFWSPSEEDGYGPDVSMSDFMDKPWKPLTRKIKVPAQILSPY 200
FDHNRWLFE+KGKYGIGNAFWS E+D Y VS SDF+DKPWKPLTRK+++PA+ILSPY
Sbjct: 124 FDHNRWLFESKGKYGIGNAFWS-EEDDTYDGGVSKSDFLDKPWKPLTRKVQIPAKILSPY 182
Query: 201 RVLIIMRLVALFFFMLWRVQNPNEDAMWLWGISIVCEIWFAFSWILDILPKLNPVHRSTD 260
R+LI++RLV +FFF+ WR+ NPNEDAMWLWG+SIVCEIWFAFSWILDILPKLNP++R+TD
Sbjct: 183 RLLIVIRLVIVFFFLWWRITNPNEDAMWLWGLSIVCEIWFAFSWILDILPKLNPINRATD 242
Query: 261 LQALKEKFETPSAANPQGRSDLPGVDVFVSTADPEKEPPLVTANTILSILAAEYPIEKLS 320
L AL +KFE PS +NP GRSDLPGVDVFVSTADPEKEPPLVTANT+LSILA +YPIEKLS
Sbjct: 243 LAALHDKFEQPSPSNPTGRSDLPGVDVFVSTADPEKEPPLVTANTLLSILAVDYPIEKLS 302
Query: 321 AYISDDGGAILTFEAMAEAVRFAEVWVPFCRKHNIEPRNPDSYFSIKGDPTRNKKRPDFV 380
AYISDDGGAILTFEAMAEAVRFAE WVPFCRKH+IEPRNPDSYFSIK DPT+NKKR DFV
Sbjct: 303 AYISDDGGAILTFEAMAEAVRFAEYWVPFCRKHDIEPRNPDSYFSIKKDPTKNKKRQDFV 362
Query: 381 KDRRWIKREYDEFKVRINGLPEVIXXXXXXXXXXXXMKEKALAMEKNGGSAPKEPINVTK 440
KDRRWIKREYDEFKVRINGLPE I +KEK +A EKNGG P + + V K
Sbjct: 363 KDRRWIKREYDEFKVRINGLPEQIKKRAEQFNMREELKEKRIAREKNGGVLPPDGVEVVK 422
Query: 441 ATWMADGTHWPGTWLHPTADHAKGDHAGILQVMSKVPENDPVMGYPDEKRLDFTGVDIRI 500
ATWMADGTHWPGTW P DH+KGDHAGILQ+MSKVP+ +PVMG P+E LDFTG+DIR+
Sbjct: 423 ATWMADGTHWPGTWFEPKPDHSKGDHAGILQIMSKVPDLEPVMGGPNEGALDFTGIDIRV 482
Query: 501 PMFAYVSREKRKGYDHQKKAGAMNGMVRASAILSNGPFILNLDCDHYIYNSLAIREGMCF 560
PMFAYVSREKR G+DH KKAGAMNGMVRASAILSNG FILNLDCDHYIYNS AI+EGMCF
Sbjct: 483 PMFAYVSREKRPGFDHNKKAGAMNGMVRASAILSNGAFILNLDCDHYIYNSKAIKEGMCF 542
Query: 561 MMDRGGDRICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGIQGPFYVGTGCMFRRY 620
MMDRGGDRICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDG+QGP YVGTGCMFRRY
Sbjct: 543 MMDRGGDRICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPVYVGTGCMFRRY 602
Query: 621 ALYGFNPPRANEYIGVIGQKKAKAGHIXXXXXXXXXXXXXXXXH--------PDLDLPRK 672
ALYGFNPPRANEY GV GQ+KA A H+ PDL LP+K
Sbjct: 603 ALYGFNPPRANEYSGVFGQEKAPAMHVRTQSQASQTSQASDLESDTQPLNDDPDLGLPKK 662
Query: 673 FGNSTMFNESIAVAEYQGRPLADHISVKNGRPPGSLLVPRPPLDAPTVAEAVAVISCWYE 732
FGNSTMF ++I VAEYQGRPLADH+SVKNGRPPG+LL+PRPPLDAPTVAEA+AVISCWYE
Sbjct: 663 FGNSTMFTDTIPVAEYQGRPLADHMSVKNGRPPGALLLPRPPLDAPTVAEAIAVISCWYE 722
Query: 733 DKTEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGSAPINLTDRLHQVLR 792
D TEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYC+TKRDAFRG+APINLTDRLHQVLR
Sbjct: 723 DNTEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFRGTAPINLTDRLHQVLR 782
Query: 793 WATGSVEIFFSRNNAILGTRRLKFLQRMAYLNTGIYPFTSIFLVTYCFLPAMCHFSGKFI 852
WATGSVEIFFS+NNA+ TRRLKFLQR+AYLN GIYPFTSIFLV YCFLPA+C FSGKFI
Sbjct: 783 WATGSVEIFFSKNNAMFATRRLKFLQRVAYLNVGIYPFTSIFLVVYCFLPALCLFSGKFI 842
Query: 853 VPNLNIAFLCYXXXXXXXXXXXXXXEVKWSGIGLEEWWRNEQFWVIGGSSAHLAAVLQGL 912
V +L+I FL Y EVKWSGIGLEEWWRNEQFW+IGG+SAHLAAV+QGL
Sbjct: 843 VQSLDIHFLSYLLCITVTLTLISLLEVKWSGIGLEEWWRNEQFWLIGGTSAHLAAVVQGL 902
Query: 913 LKVIAGIEISFTLTTKSAAEDDEDMYADLYIIKWTSLFIVPLTIIVVNIVALVIGASRTI 972
LKVIAGIEISFTLT+K++ ED++D++ADLYI+KWT LFI+PLTII+VN+VA+VIGASRTI
Sbjct: 903 LKVIAGIEISFTLTSKASGEDEDDIFADLYIVKWTGLFIMPLTIIIVNLVAIVIGASRTI 962
Query: 973 YSVLPQWGKLLGGSFFSFWVLAHMYPFCKGLMGRRGKLPTIIYVWTGLLSITLSLIWVTV 1032
YSV+PQWGKL+GG FFS WVL HMYPF KGLMGRRGK+PTI+YVW+GL+SIT+SL+W+T+
Sbjct: 963 YSVIPQWGKLMGGIFFSLWVLTHMYPFAKGLMGRRGKVPTIVYVWSGLVSITVSLLWITI 1022
Query: 1033 SPPDKTNEMEG 1043
SPPD + G
Sbjct: 1023 SPPDDVSGSGG 1033
|
|
| TAIR|locus:2148171 CSLD2 "AT5G16910" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2097700 CSLD3 "AT3G03050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2121080 CSLD4 "AT4G38190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q2QNS6 CSLD4 "Cellulose synthase-like protein D4" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2031740 CSLD6 "AT1G32180" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2024745 CSLD5 "AT1G02730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O49323 | CSLD1_ARATH | 2, ., 4, ., 1, ., - | 0.7822 | 0.9798 | 0.9874 | yes | no |
| Q5Z6E5 | CSLD5_ORYSJ | 2, ., 4, ., 1, ., - | 0.7020 | 0.9348 | 0.9644 | yes | no |
| A2YCI3 | CSLD5_ORYSI | 2, ., 4, ., 1, ., - | 0.6988 | 0.9377 | 0.9673 | N/A | no |
| A2ZAK8 | CSLD1_ORYSI | 2, ., 4, ., 1, ., - | 0.6698 | 0.8764 | 0.8118 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.921 |
| 4th Layer | 2.4.1.12 | 0.914 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1044 | |||
| PLN02248 | 1135 | PLN02248, PLN02248, cellulose synthase-like protei | 0.0 | |
| pfam03552 | 716 | pfam03552, Cellulose_synt, Cellulose synthase | 0.0 | |
| PLN02436 | 1094 | PLN02436, PLN02436, cellulose synthase A | 0.0 | |
| PLN02638 | 1079 | PLN02638, PLN02638, cellulose synthase A (UDP-form | 0.0 | |
| PLN02195 | 977 | PLN02195, PLN02195, cellulose synthase A | 0.0 | |
| PLN02189 | 1040 | PLN02189, PLN02189, cellulose synthase | 0.0 | |
| PLN02915 | 1044 | PLN02915, PLN02915, cellulose synthase A [UDP-form | 0.0 | |
| PLN02400 | 1085 | PLN02400, PLN02400, cellulose synthase | 0.0 | |
| PLN02190 | 756 | PLN02190, PLN02190, cellulose synthase-like protei | 1e-109 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 4e-72 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 1e-39 | |
| PLN02248 | 1135 | PLN02248, PLN02248, cellulose synthase-like protei | 4e-21 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 1e-10 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 2e-10 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 3e-10 | |
| PRK11498 | 852 | PRK11498, bcsA, cellulose synthase catalytic subun | 8e-09 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 1e-07 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 3e-05 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 7e-05 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 3e-04 | |
| pfam13632 | 194 | pfam13632, Glyco_trans_2_3, Glycosyl transferase f | 0.004 |
| >gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein | Back alignment and domain information |
|---|
Score = 1992 bits (5162), Expect = 0.0
Identities = 695/954 (72%), Positives = 803/954 (84%), Gaps = 12/954 (1%)
Query: 97 DARRGQGEGGSGGSGGNSGAKMERRMSVMKSNNKSMLLRSQTGDFDHNRWLFETKGKYGI 156
D G+ G+KM+RR+S+MKS S+L+RSQTGDFDHNRWLFETKG YG
Sbjct: 182 DDEVPDESSGALPLPPPGGSKMDRRLSLMKS--NSLLMRSQTGDFDHNRWLFETKGTYGY 239
Query: 157 GNAFWSPSEEDGYGPDVSMS---DFMDKPWKPLTRKIKVPAQILSPYRVLIIMRLVALFF 213
GNA W ++DGYG D +FMDKPW+PLTRK+K+ A ILSPYR+LI++RLV L
Sbjct: 240 GNAVWP--KDDGYGDDGGGGGPGEFMDKPWRPLTRKVKISAAILSPYRLLILIRLVVLGL 297
Query: 214 FMLWRVQNPNEDAMWLWGISIVCEIWFAFSWILDILPKLNPVHRSTDLQALKEKFETPSA 273
F+ WRV+NPNEDAMWLWG+S+VCEIWFAFSW+LD LPKL P++R+TDL LKEKFETPS
Sbjct: 298 FLTWRVRNPNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRATDLAVLKEKFETPSP 357
Query: 274 ANPQGRSDLPGVDVFVSTADPEKEPPLVTANTILSILAAEYPIEKLSAYISDDGGAILTF 333
+NP GRSDLPG+DVFVSTADPEKEPPLVTANTILSILAA+YP+EKL+ Y+SDDGGA+LTF
Sbjct: 358 SNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTF 417
Query: 334 EAMAEAVRFAEVWVPFCRKHNIEPRNPDSYFSIKGDPTRNKKRPDFVKDRRWIKREYDEF 393
EAMAEA FA +WVPFCRKH+IEPRNP+SYFS+K DPT+NK RPDFVKDRR +KREYDEF
Sbjct: 418 EAMAEAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEF 477
Query: 394 KVRINGLPEVIRRRAEAYNNRERMKEKALAMEKNGGSAPKEPINVTKATWMADGTHWPGT 453
KVRINGLP+ IRRR++AYN RE +K K E GG P EP+ V KATWMADGTHWPGT
Sbjct: 478 KVRINGLPDSIRRRSDAYNAREEIKAKKKQRESGGG-DPSEPLKVPKATWMADGTHWPGT 536
Query: 454 WLHPTADHAKGDHAGILQVMSKVPENDPVMGYPDEKR-LDFTGVDIRIPMFAYVSREKRK 512
WL DH++GDHAGI+QVM K P ++P+MG D++ +DFT VDIR+PM YVSREKR
Sbjct: 537 WLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDIRLPMLVYVSREKRP 596
Query: 513 GYDHQKKAGAMNGMVRASAILSNGPFILNLDCDHYIYNSLAIREGMCFMMDRGGDRICYI 572
GYDH KKAGAMN +VRASAI+SNGPFILNLDCDHYIYNSLAIREGMCFMMDRGGDRICY+
Sbjct: 597 GYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRGGDRICYV 656
Query: 573 QFPQRFEGIDPSDRYANHNTVFFDGNMRALDGIQGPFYVGTGCMFRRYALYGFNPPRANE 632
QFPQRFEGIDPSDRYANHNTVFFD NMRALDG+QGP YVGTGC+FRR ALYGF+PPRA E
Sbjct: 657 QFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKE 716
Query: 633 YIGVIGQKKAKAGHIPPRTDDDDSDTRPLTSHPDLD---LPRKFGNSTMFNESIAVAEYQ 689
+ G G K + + + L DL+ LP++FGNSTMF SI VAE+Q
Sbjct: 717 HSGCFGSCKFTKKKKKETSASEPEEQPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQ 776
Query: 690 GRPLADHISVKNGRPPGSLLVPRPPLDAPTVAEAVAVISCWYEDKTEWGDRIGWIYGSVT 749
GRPLADH SVKNGRPPG+L VPR PLDA TVAEA++VISCWYEDKTEWGDR+GWIYGSVT
Sbjct: 777 GRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVT 836
Query: 750 EDVVTGYRMHNRGWRSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAIL 809
EDVVTGYRMHNRGWRSVYCVTKRDAFRG+APINLTDRLHQVLRWATGSVEIFFSRNNA+L
Sbjct: 837 EDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALL 896
Query: 810 GTRRLKFLQRMAYLNTGIYPFTSIFLVTYCFLPAMCHFSGKFIVPNLNIAFLCYLLTITV 869
+RRLKFLQR+AYLN GIYPFTSIFL+ YCFLPA+ FSG+FIV LN+ FL YLL IT+
Sbjct: 897 ASRRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIITI 956
Query: 870 TLTLISLLEVKWSGIGLEEWWRNEQFWVIGGSSAHLAAVLQGLLKVIAGIEISFTLTTKS 929
TL L+++LE+KWSGI LEEWWRNEQFW+IGG+SAHLAAVLQGLLKVIAGIEISFTLT+KS
Sbjct: 957 TLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKS 1016
Query: 930 AAEDDEDMYADLYIIKWTSLFIVPLTIIVVNIVALVIGASRTIYSVLPQWGKLLGGSFFS 989
A +D++D +ADLYI+KWTSL I P+TI++VN++A+ +G SRTIYS +PQW KLLGG FFS
Sbjct: 1017 AGDDEDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFS 1076
Query: 990 FWVLAHMYPFCKGLMGRRGKLPTIIYVWTGLLSITLSLIWVTVSPPDKTNEMEG 1043
FWVLAH+YPF KGLMGRRG+ PTI+YVW+GLLSIT+SL+WV +SPP ++ G
Sbjct: 1077 FWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLLSITISLLWVAISPPSGAAQIGG 1130
|
Length = 1135 |
| >gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1044 | |||
| PLN02248 | 1135 | cellulose synthase-like protein | 100.0 | |
| PLN02436 | 1094 | cellulose synthase A | 100.0 | |
| PLN02638 | 1079 | cellulose synthase A (UDP-forming), catalytic subu | 100.0 | |
| PLN02400 | 1085 | cellulose synthase | 100.0 | |
| PLN02915 | 1044 | cellulose synthase A [UDP-forming], catalytic subu | 100.0 | |
| PLN02195 | 977 | cellulose synthase A | 100.0 | |
| PLN02189 | 1040 | cellulose synthase | 100.0 | |
| PLN02190 | 756 | cellulose synthase-like protein | 100.0 | |
| PF03552 | 720 | Cellulose_synt: Cellulose synthase; InterPro: IPR0 | 100.0 | |
| PLN02893 | 734 | Cellulose synthase-like protein | 100.0 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 100.0 | |
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 100.0 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 100.0 | |
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 100.0 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 99.97 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 99.96 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 99.95 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 99.94 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 99.92 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 99.91 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 99.9 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.88 | |
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 99.87 | |
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 99.86 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 99.85 | |
| COG2943 | 736 | MdoH Membrane glycosyltransferase [Cell envelope b | 99.8 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 99.79 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 99.78 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.77 | |
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.74 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 99.71 | |
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.7 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.69 | |
| PF13632 | 193 | Glyco_trans_2_3: Glycosyl transferase family group | 99.67 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 99.54 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 99.54 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.3 | |
| PF13506 | 175 | Glyco_transf_21: Glycosyl transferase family 21 | 99.19 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.16 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 99.16 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 99.11 | |
| PF03142 | 527 | Chitin_synth_2: Chitin synthase; InterPro: IPR0048 | 98.9 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 98.87 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 98.85 | |
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 98.8 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 98.79 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 98.71 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 98.68 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 98.64 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 98.63 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 98.61 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 98.57 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 98.56 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 98.5 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 98.43 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 98.29 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 98.25 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 98.19 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 98.19 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 97.98 | |
| KOG2571 | 862 | consensus Chitin synthase/hyaluronan synthase (gly | 97.97 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 97.91 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 97.82 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 97.72 | |
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 97.68 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 97.43 | |
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 97.27 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 97.11 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 96.03 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 93.2 | |
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 90.68 | |
| KOG2547 | 431 | consensus Ceramide glucosyltransferase [Lipid tran | 86.11 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 84.29 | |
| PF08043 | 16 | Xin: Xin repeat; InterPro: IPR012510 The repeat ha | 84.04 | |
| PF02364 | 817 | Glucan_synthase: 1,3-beta-glucan synthase componen | 82.15 |
| >PLN02248 cellulose synthase-like protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-295 Score=2604.49 Aligned_cols=1027 Identities=72% Similarity=1.257 Sum_probs=949.1
Q ss_pred CCCCCCCCcccccccc------CCCccccccccccCCCceeecccccccccCCCCCCCCcceeeEEEcCCCCCCCCCCCC
Q 036064 4 PTSPKKSSLSKQTSTA------GRPPQAVKFARRSSSGRVVSLSREEDLDMSGDYSGQNDYINYTVLMPPTPDNQPSGQD 77 (1044)
Q Consensus 4 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (1044)
+++|+++++++++.++ ++++|+++|+|||+||||+|+|||| +|++++.++ +||+|||||||||||||||...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 82 (1135)
T PLN02248 5 SSKPSRKSLSSSSSSAGPPSNNSSSPQSVKFARRTSSGRYVSLSRDD-LDLSGELSS-SDYLNYTVHIPPTPDNQPMAGK 82 (1135)
T ss_pred CCCCCcccccCCCCCCCCCCCCCCCCCCCCCCccCCCCcceeccccc-ccccccccc-ccceeeEEeCCCCCCCcccccc
Confidence 5568888888888777 7888999999999999999999998 999998865 6899999999999999998443
Q ss_pred C----CCCCCCCCCCC--Cc------ccCCCCCCCCCCCCCCCCC---CCCCcccc------------------------
Q 036064 78 S----DSKPDGPSQYQ--TS------RFGPSDARRGQGEGGSGGS---GGNSGAKM------------------------ 118 (1044)
Q Consensus 78 ~----~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~---~~~~~~~~------------------------ 118 (1044)
. -||++|||||| || ++|+ +++||||+|++|+. +||||++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (1135)
T PLN02248 83 AEEQYVSNSIFTGGFNSVTRAHLMDKVIES-EVSHPQMAGAKGSSCAMPGCDGKVMRDERGEDLLPCECGFKICRDCYID 161 (1135)
T ss_pred hhhhccccceecCCCCccchhhhhhccccc-ccCCcccCCCCCCcccccCcccccccccccccCCcccccchhHHhHhhh
Confidence 3 39999999999 88 8888 58999999999988 99999988
Q ss_pred ------------------------------------------cccccccccCchhhhccccCCCCccccceeeccccccc
Q 036064 119 ------------------------------------------ERRMSVMKSNNKSMLLRSQTGDFDHNRWLFETKGKYGI 156 (1044)
Q Consensus 119 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (1044)
+++++++++ +|++.|+|+||||||||||||||||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~w~~~~~~~~~~ 239 (1135)
T PLN02248 162 AVKSGGICPGCKEPYKVTDLDDEVPDESSGALPLPPPGGSKMDRRLSLMKS--NSLLMRSQTGDFDHNRWLFETKGTYGY 239 (1135)
T ss_pred hhhcCCCCCCCccccccccccccccccccccccCCCCCCcccccccccccc--cchhccCCCCCCCCceeeeeccccccc
Confidence 122222222 256678999999999999999999999
Q ss_pred cccccCCCCCCCCCCC-CCCCcCCCCCCCCceeeccccccccchhhHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHH
Q 036064 157 GNAFWSPSEEDGYGPD-VSMSDFMDKPWKPLTRKIKVPAQILSPYRVLIIMRLVALFFFMLWRVQNPNEDAMWLWGISIV 235 (1044)
Q Consensus 157 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~pl~~~~~~~~~~~~~yR~~~~~~lv~l~~~l~wRv~~~n~~a~w~w~~~~~ 235 (1044)
|||+||+|...+.+++ ....+++|++|+||+||+++++++|+|||+++++++++|++||+||++|+|.+++|+|+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~~~~~~~~~W~~s~~ 319 (1135)
T PLN02248 240 GNAVWPKDDGYGDDGGGGGPGEFMDKPWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRNPNEDAMWLWGMSVV 319 (1135)
T ss_pred ccccCccccccCCCCCccccccccccCCCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHH
Confidence 9999999863333332 345599999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcccccccCCcchHHHHhhhcCCCCCCCCCCCCCCcccEEEeCCCCCCCChHHHHHHHHHHHcccCC
Q 036064 236 CEIWFAFSWILDILPKLNPVHRSTDLQALKEKFETPSAANPQGRSDLPGVDVFVSTADPEKEPPLVTANTILSILAAEYP 315 (1044)
Q Consensus 236 ~E~wf~f~wlL~q~~kw~Pv~R~~~~~~L~~r~~~~~~~~p~~~~~lP~VDVFV~TaDP~kEPp~~v~nTVlS~la~DYP 315 (1044)
||+||+|+|+|+|++||+||+|.||+++|++|||+|+|+||+++++||+||||||||||+||||++|+||||||||+|||
T Consensus 320 cE~WFaf~Wll~q~~Kw~Pv~R~t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP 399 (1135)
T PLN02248 320 CEIWFAFSWLLDQLPKLCPINRATDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYP 399 (1135)
T ss_pred HHHHHHHHHHHhccccccccccccCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEcCCCCchhhHHHHHHHHhhhhhhhhhhhhccCCCCCCCcccccCCCCCCCCCCcccHHHHHHHHHHHHHHHH
Q 036064 316 IEKLSAYISDDGGAILTFEAMAEAVRFAEVWVPFCRKHNIEPRNPDSYFSIKGDPTRNKKRPDFVKDRRWIKREYDEFKV 395 (1044)
Q Consensus 316 ~~Kl~~YvsDDGgs~lTf~al~Eaa~FA~~WvPFCrk~~IepR~P~~YF~~~~~~~~~~~~~~f~~e~~~~K~eYee~k~ 395 (1044)
+|||+|||||||||+||||||+|||+|||+||||||||||||||||+||+.+.++++++.+++|++||++|||||||||+
T Consensus 400 ~eKLacYvSDDGgS~LTf~AL~EAa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~ 479 (1135)
T PLN02248 400 VEKLACYLSDDGGALLTFEAMAEAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKV 479 (1135)
T ss_pred ccceeEEEecCCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcchhHHHhhhhhhhhHHHHHHHHHHHhhc-CCCCCCCCcccccccccCCCCCCCCcccCCCCCCccCCccceeeeec
Q 036064 396 RINGLPEVIRRRAEAYNNRERMKEKALAMEKN-GGSAPKEPINVTKATWMADGTHWPGTWLHPTADHAKGDHAGILQVMS 474 (1044)
Q Consensus 396 rI~~l~~~~~~~~~~~~~~ee~~~~~~~~~~~-~~~~~~~~~~~~~~~wm~dgt~w~g~w~~~~~~~~~~dH~~iiqv~~ 474 (1044)
|||+|+++|++|||+||..||+|.+ ++++| .+.+|.|..+|||+|||+|||||||||++++++|+++|||+|||||+
T Consensus 480 RIe~l~~~~~~rs~~~n~~~e~~~~--~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll 557 (1135)
T PLN02248 480 RINGLPDSIRRRSDAYNAREEIKAK--KKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVML 557 (1135)
T ss_pred HHHhhhhhccccccccchhHHHHhh--hhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEec
Confidence 9999999999999999999987433 33444 47889999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCc-ccccccCcccccCcEEEEeccCCCCCCCCCcchhhhHHHHhccccCCCCEEEeecCCCCCCchHH
Q 036064 475 KVPENDPVMGYPDE-KRLDFTGVDIRIPMFAYVSREKRKGYDHQKKAGAMNGMVRASAILSNGPFILNLDCDHYIYNSLA 553 (1044)
Q Consensus 475 ~~~~~~~~~g~~~~-~~~d~~~~~~~lP~lvYvsReKRpg~~h~~KAGALNallrvSav~sngpfIl~lDcD~~~~np~~ 553 (1044)
++|+.++.+|..++ +.+|++++|++||+||||||||||||+|||||||||||+||||+|||||||||||||||+|||++
T Consensus 558 ~~p~~e~~~g~~~~~~~~d~~~~d~~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~a 637 (1135)
T PLN02248 558 KPPSDEPLMGSADDENLIDFTDVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLA 637 (1135)
T ss_pred cCCCcccccCcccccccccccccccccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchh
Confidence 99999999987634 45999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCcEEEEecCceecCCCCcccccchhhhhhhhhhhhccccCCcccccccchhhhhhhcCCCCCCCccc
Q 036064 554 IREGMCFMMDRGGDRICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGIQGPFYVGTGCMFRRYALYGFNPPRANEY 633 (1044)
Q Consensus 554 Lr~amcff~D~~~~~vafVQ~PQ~F~nid~~D~y~n~~~vFfdv~~~glDglqgp~y~GTGcv~RR~AL~g~~p~~~~~~ 633 (1044)
||+|||||||++++++|||||||+|+|++++|||+||+++|||++|+|+||+|||+||||||+|||+||||++||+.++.
T Consensus 638 lr~AMCf~lD~~g~~vAfVQFPQrF~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~ 717 (1135)
T PLN02248 638 IREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEH 717 (1135)
T ss_pred HHhcchheecCCCCceEEEcCCcccCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred ccccc-----ccccccCCCCC--CC-CC-CCCCCCCCCCCCCCCcCcccCCchhhhhhHHHHhhcCCCccccccccCCCC
Q 036064 634 IGVIG-----QKKAKAGHIPP--RT-DD-DDSDTRPLTSHPDLDLPRKFGNSTMFNESIAVAEYQGRPLADHISVKNGRP 704 (1044)
Q Consensus 634 ~~~~~-----~~~~~~~~~~~--~~-~~-~~~~~~~~~~~~~~~~~~~fg~s~~~~~si~~~~~~G~~~~~~~~~~~~~~ 704 (1044)
.++|+ +..+++.+... .. +. +++++. ...++++||+|++|++|+..++.||+++++|++++++++
T Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~ 791 (1135)
T PLN02248 718 SGCFGSCKFTKKKKKETSASEPEEQPDLEDDDDLE------LSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRP 791 (1135)
T ss_pred cccccccccccccccccccccccccccccccchhh------hhhhhhhhccchhhhhhhHHHhhcccccccccccccccc
Confidence 44433 22211111000 00 00 111111 234688999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCchhHHHhhhhccccccccccccccccccCCCccchHHHHHHHHhCCcEEEEeccCCccccccCCCCHH
Q 036064 705 PGSLLVPRPPLDAPTVAEAVAVISCWYEDKTEWGDRIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGSAPINLT 784 (1044)
Q Consensus 705 ~g~~~~~~~~~~~~~~~eA~~vasC~YE~~T~WGkevGw~~~svTED~~TglrLh~rGWrSvY~~p~~~af~GlAP~tL~ 784 (1044)
+|++..+++++++++++||++|++|+||++|+||+||||.|+|+|||+.||++||++||||+||+|++++|.|+||+|+.
T Consensus 792 ~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~ 871 (1135)
T PLN02248 792 PGALTVPREPLDAATVAEAISVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLT 871 (1135)
T ss_pred cccccccccCCcHHHHHHHHhhcccccccCCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred HHHHhhhhhhcchhHHHhhhcccccccCCcccccccchhcccccchhHHHHHHHHHHHHHHHHhCCcccccchHHHHHHH
Q 036064 785 DRLHQVLRWATGSVEIFFSRNNAILGTRRLKFLQRMAYLNTGIYPFTSIFLVTYCFLPAMCHFSGKFIVPNLNIAFLCYL 864 (1044)
Q Consensus 785 ~~l~QR~RWA~G~lQIl~sk~~pll~~~~Lsl~QRL~Yl~~~ly~l~sl~~LiylllPil~Ll~Gi~~vp~~s~~fliyl 864 (1044)
++++||+|||+|++||++++++|++..++|++.|||+|+++++||+.+++.++|+++|++||++|++++++.+.+|++|+
T Consensus 872 d~L~Qr~RWA~G~lQIf~sr~~Pll~~~~Lsl~QRL~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~~p~~~~~fl~yl 951 (1135)
T PLN02248 872 DRLHQVLRWATGSVEIFFSRNNALLASRRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYL 951 (1135)
T ss_pred HHHHHHHHHhhchHHHHhccCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccHHHHHHH
Confidence 99999999999999999999999886789999999999999999999999999999999999999999999889999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCChhhhhhhhhhHHhhhhHHHHHHHHHHHHHHHcCcccceEeCCCCCCCCccccccceEEe
Q 036064 865 LTITVTLTLISLLEVKWSGIGLEEWWRNEQFWVIGGSSAHLAAVLQGLLKVIAGIEISFTLTTKSAAEDDEDMYADLYII 944 (1044)
Q Consensus 865 Lp~~ls~~l~slLe~rwsG~sl~~wWr~qr~WlI~~tsa~l~Avi~aLlk~Lggk~~sF~VTpK~~~~~~~~~y~~~~~f 944 (1044)
+++++++++++++|++|+|+++++|||+||||+|.++++|++|++++++|+|++++++|+||+|+.+++.+++|+++|+|
T Consensus 952 l~l~l~~~~~sllE~~wsGvsl~~WWrnQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~a~ly~f 1031 (1135)
T PLN02248 952 LIITITLCLLAVLEIKWSGITLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEFADLYIV 1031 (1135)
T ss_pred HHHHHHHHHHHHHHHhhccccHHHHhhhhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCcccccccccccchheec
Confidence 99888889999999999999999999999999999999999999999999999999999999999987777789999999
Q ss_pred ecchhhHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHH
Q 036064 945 KWTSLFIVPLTIIVVNIVALVIGASRTIYSVLPQWGKLLGGSFFSFWVLAHMYPFCKGLMGRRGKLPTIIYVWTGLLSIT 1024 (1044)
Q Consensus 945 ~ws~l~iP~i~LlllnLvAiv~gi~r~v~~~~~~w~~l~g~l~~~~Wvl~nl~Pf~~gL~~Rkg~~P~~v~~~s~~~~~~ 1024 (1044)
+||++++|+++++++|++|+++|++|++++..+.|+.+++++++++|+++|+|||+||||+||||+|+||+|||++++++
T Consensus 1032 ~wS~L~iP~ttl~llNLvAivvGv~R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR~gr~P~iv~v~s~ll~~~ 1111 (1135)
T PLN02248 1032 KWTSLMIPPITIMMVNLIAIAVGVSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVYVWSGLLSIT 1111 (1135)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhccCCCCCeehHHHHHHHHHH
Confidence 99999999999999999999999999998766678889999999999999999999999999999999999999999999
Q ss_pred HHhhheeecCCCCCCCCCC
Q 036064 1025 LSLIWVTVSPPDKTNEMEG 1043 (1044)
Q Consensus 1025 ~~llw~~~~~~~~~~~~~~ 1043 (1044)
||||||+|+|+.+.+++||
T Consensus 1112 ~sll~v~~~~~~~~~~~~~ 1130 (1135)
T PLN02248 1112 ISLLWVAISPPSGAAQIGG 1130 (1135)
T ss_pred HHHHheEeccccCccccCc
Confidence 9999999999999999976
|
|
| >PLN02436 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02638 cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >PLN02400 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02915 cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >PLN02195 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02189 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02190 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals | Back alignment and domain information |
|---|
| >PLN02893 Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
| >COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
| >PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
| >PF13506 Glyco_transf_21: Glycosyl transferase family 21 | Back alignment and domain information |
|---|
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
| >PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 | Back alignment and domain information |
|---|
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
| >KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
|---|
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
|---|
| >KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PF08043 Xin: Xin repeat; InterPro: IPR012510 The repeat has the consensus sequence GDV(K/Q/R)(T/S/G)X(R/K/T) WLFETXPLD | Back alignment and domain information |
|---|
| >PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1044 | ||||
| 4hg6_A | 802 | Structure Of A Cellulose Synthase - Cellulose Trans | 2e-07 |
| >pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1044 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 8e-06
Identities = 88/625 (14%), Positives = 163/625 (26%), Gaps = 201/625 (32%)
Query: 12 LSKQTSTAGRPPQAVKFARRSSSGRVVSLSREEDLDMSGDYSGQNDYINYTVLMPPTPDN 71
LSKQ + V+ R + ++S + E S + + DN
Sbjct: 72 LSKQEEMVQK---FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD-----RLYNDN 123
Query: 72 QPSGQDSDSKPDGPSQYQTSRFGPSDARRGQGEG--GSGGSGGNSGAKMERRMSVMKSNN 129
Q + + S+ Y R + R + G GSG
Sbjct: 124 QVFAKYNVSRLQ---PYLKLRQALLELRPAKNVLIDGVLGSG------------------ 162
Query: 130 KSMLLRSQTGDFDHNRWLFETKGKYGIGNAFW-----SPSEEDGYGPDVSMSDFMDKPWK 184
K+ + + + K + I FW S E + +D W
Sbjct: 163 KTWVALDVCLSYK-----VQCKMDFKI---FWLNLKNCNSPETVLEMLQKLLYQIDPNWT 214
Query: 185 PL---TRKIKVPAQILS----------PY-RVLIIMRLVALFFFMLWRVQNPNE-DAMWL 229
+ IK+ + PY L+++ VQN +A
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL----------NVQNAKAWNAF-- 262
Query: 230 WGISIVCEIWF--AFSWILDILPKLNPVHRSTDLQALKEKFETPSAANPQGR------SD 281
++ C+I F + D L H S L + + D
Sbjct: 263 ---NLSCKILLTTRFKQVTDFLSAATTTHIS--LDHHSMTLTPDEVKSLLLKYLDCRPQD 317
Query: 282 LPGVDVFVSTADPEKEPPLVTANTILSILAAE-------------YPIEKLSAYISDDGG 328
LP + + P LSI+A +KL+ I +
Sbjct: 318 LPREVLTTN--------PRR-----LSIIAESIRDGLATWDNWKHVNCDKLTTII-ESSL 363
Query: 329 AILT-------FEAMAEAVRFAE-VWVP---FCRK-HNIEPRNPD-------SYFSIKGD 369
+L F+ ++ V F +P ++ + Y ++
Sbjct: 364 NVLEPAEYRKMFDRLS--V-FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420
Query: 370 PTRNKKR-PDFVKDRRWIKREYDEFKVRINGLPEVIRRRAEAYNNRERMKEKALAMEKNG 428
P + P Y E KV++ + R + YN + + +
Sbjct: 421 PKESTISIPSI----------YLELKVKLENEYALHRSIVDHYNIPK-------TFDSDD 463
Query: 429 GSAPKEPINVTKATWMADGTHWPGTWLHPTADHAKG-DHAGILQVMSKVPENDPVMGYPD 487
P + + H K +H + + V + D
Sbjct: 464 LIPP----------------YLDQYFYSHIGHHLKNIEHPERMTLFRMV--------FLD 499
Query: 488 EKRLDFTGVDIRIPMFAYVSR----------EKRKGY-------DHQKKAGAMNGMVRAS 530
F IR A+ + + K Y + ++ + +
Sbjct: 500 ---FRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIE 556
Query: 531 AILSNGPF--ILNL---DCDHYIYN 550
L + +L + D I+
Sbjct: 557 ENLICSKYTDLLRIALMAEDEAIFE 581
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1044 | |||
| 4hg6_A | 802 | Cellulose synthase subunit A; membrane translocati | 100.0 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.37 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 99.29 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 99.21 | |
| 1qg8_A | 255 | Protein (spore coat polysaccharide biosynthesis P | 99.2 | |
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 99.17 | |
| 3bcv_A | 240 | Putative glycosyltransferase protein; protein stru | 99.09 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 98.99 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 98.61 | |
| 3ckj_A | 329 | Putative uncharacterized protein; mycobacteria, un | 98.57 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 98.37 | |
| 3f1y_A | 387 | Mannosyl-3-phosphoglycerate synthase; GT-A type gl | 97.52 | |
| 2fy7_A | 287 | Beta-1,4-galactosyltransferase 1; M339H mutant, AP | 97.37 | |
| 2nxv_A | 249 | ATP synthase subunits region ORF 6; majastridin, A | 95.97 | |
| 1fo8_A | 343 | Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl | 93.22 | |
| 2bo4_A | 397 | Mannosylglycerate synthase; catalysis, glycosyltra | 83.62 |
| >4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-48 Score=473.60 Aligned_cols=494 Identities=21% Similarity=0.323 Sum_probs=380.5
Q ss_pred hH-HHHHHHHHHHHHHHHHhcCC-CCc----hhHHHHHHHHHHHHHHHHHHHhhhcccccccCCcchHHHHhhhcCCCCC
Q 036064 201 RV-LIIMRLVALFFFMLWRVQNP-NED----AMWLWGISIVCEIWFAFSWILDILPKLNPVHRSTDLQALKEKFETPSAA 274 (1044)
Q Consensus 201 R~-~~~~~lv~l~~~l~wRv~~~-n~~----a~w~w~~~~~~E~wf~f~wlL~q~~kw~Pv~R~~~~~~L~~r~~~~~~~ 274 (1044)
|+ ++++.+++.+.|++||++.+ +.. ..++|++++++|+++.+.|++.++..++|..|.+.++
T Consensus 66 ~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~------------ 133 (802)
T 4hg6_A 66 RFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRP------------ 133 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCC------------
T ss_pred HHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC------------
Confidence 44 45555666788999999876 322 4578889999999999999999999999998875331
Q ss_pred CCCCCCCCCcccEEEeCCCCCCCChHHHHHHHHHHHcccCCCCCceEEEcCCCCchhhHHHHHHHHhhhhhhhhhhhhcc
Q 036064 275 NPQGRSDLPGVDVFVSTADPEKEPPLVTANTILSILAAEYPIEKLSAYISDDGGAILTFEAMAEAVRFAEVWVPFCRKHN 354 (1044)
Q Consensus 275 ~p~~~~~lP~VDVFV~TaDP~kEPp~~v~nTVlS~la~DYP~~Kl~~YvsDDGgs~lTf~al~Eaa~FA~~WvPFCrk~~ 354 (1044)
..++++|.|+|+|||| +|++.++.+|+.|++++|||.+++.|+|.|||.++-|.+.
T Consensus 134 --~~~~~~P~VSViIPty---Ne~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~------------------- 189 (802)
T 4hg6_A 134 --LQPEELPTVDILVPSY---NEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS------------------- 189 (802)
T ss_dssp --CCTTTCCCEEEEEECT---TCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC-------------------
T ss_pred --CCccCCCcEEEEEEEC---CCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc-------------------
Confidence 1246799999999999 8999999999999999999999999999999998843311
Q ss_pred CCCCCCCcccccCCCCCCCCCCcccHHHHHHHHHHHHHHHHHhhcchhHHHhhhhhhhhHHHHHHHHHHHhhcCCCCCCC
Q 036064 355 IEPRNPDSYFSIKGDPTRNKKRPDFVKDRRWIKREYDEFKVRINGLPEVIRRRAEAYNNRERMKEKALAMEKNGGSAPKE 434 (1044)
Q Consensus 355 IepR~P~~YF~~~~~~~~~~~~~~f~~e~~~~K~eYee~k~rI~~l~~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~ 434 (1044)
.+++.++ ++++-...++.+ ++
T Consensus 190 --------------------~d~~i~~-------~~~~~~~~l~~~----------------------~~---------- 210 (802)
T 4hg6_A 190 --------------------PDPELAQ-------KAQERRRELQQL----------------------CR---------- 210 (802)
T ss_dssp --------------------SSHHHHH-------HHHHHHHHHHHH----------------------HH----------
T ss_pred --------------------CCHHHHH-------HHHhhhHHHHHH----------------------HH----------
Confidence 0111111 111111111100 00
Q ss_pred CcccccccccCCCCCCCCcccCCCCCCccCCccceeeeeccCCCCCCCCCCCCcccccccCcccccCcEEEEeccCCCCC
Q 036064 435 PINVTKATWMADGTHWPGTWLHPTADHAKGDHAGILQVMSKVPENDPVMGYPDEKRLDFTGVDIRIPMFAYVSREKRKGY 514 (1044)
Q Consensus 435 ~~~~~~~~wm~dgt~w~g~w~~~~~~~~~~dH~~iiqv~~~~~~~~~~~g~~~~~~~d~~~~~~~lP~lvYvsReKRpg~ 514 (1044)
-..+.|+.|+++
T Consensus 211 -----------------------------------------------------------------~~~v~~i~~~~~--- 222 (802)
T 4hg6_A 211 -----------------------------------------------------------------ELGVVYSTRERN--- 222 (802)
T ss_dssp -----------------------------------------------------------------HHTCEEEECSSC---
T ss_pred -----------------------------------------------------------------hcCcEEEEecCC---
Confidence 002678888873
Q ss_pred CCCCcchhhhHHHHhccccCCCCEEEeecCCCCCCchHHHHHHHHHHhhcCCCcEEEEecCceecCCCCc-------ccc
Q 036064 515 DHQKKAGAMNGMVRASAILSNGPFILNLDCDHYIYNSLAIREGMCFMMDRGGDRICYIQFPQRFEGIDPS-------DRY 587 (1044)
Q Consensus 515 ~h~~KAGALNallrvSav~sngpfIl~lDcD~~~~np~~Lr~amcff~D~~~~~vafVQ~PQ~F~nid~~-------D~y 587 (1044)
++.||||+|.+++ .++++||+++|||+++ +|++|++.+.+|.+ ++++++||+|+.+.|.++. +++
T Consensus 223 -~~GKa~alN~gl~----~a~gd~Il~lDaD~~~-~pd~L~~lv~~~~~--dp~v~~V~~~~~~~~~~~~~~~~~~~~~~ 294 (802)
T 4hg6_A 223 -EHAKAGNMSAALE----RLKGELVVVFDADHVP-SRDFLARTVGYFVE--DPDLFLVQTPHFFINPDPIQRNLALGDRC 294 (802)
T ss_dssp -CSHHHHHHHHHHH----HCCCSEEEECCTTEEE-CTTHHHHHHHHHHH--SSSCCEEECCCCBSSCCHHHHHHTCCTTS
T ss_pred -CCcchHHHHHHHH----hcCCCEEEEECCCCCc-ChHHHHHHHHHHhc--CCCeEEEeccEEEeCCchHhhhhhHHhhh
Confidence 5689999999998 4689999999999997 59999999999964 4899999999999987642 344
Q ss_pred cchhhhhhhhhhhhccccCCcccccccchhhhhhhcCCCCCCCccccccccccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 036064 588 ANHNTVFFDGNMRALDGIQGPFYVGTGCMFRRYALYGFNPPRANEYIGVIGQKKAKAGHIPPRTDDDDSDTRPLTSHPDL 667 (1044)
Q Consensus 588 ~n~~~vFfdv~~~glDglqgp~y~GTGcv~RR~AL~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 667 (1044)
.+++..||...+.+.+.+++++++|+++++||+++..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~------------------------------------------- 331 (802)
T 4hg6_A 295 PPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDE------------------------------------------- 331 (802)
T ss_dssp CCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHH-------------------------------------------
T ss_pred hHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHH-------------------------------------------
Confidence 5677889999999999999999999999999999852
Q ss_pred CcCcccCCchhhhhhHHHHhhcCCCccccccccCCCCCCCCCCCCCCCCchhHHHhhhhccccccccccccccccccCCC
Q 036064 668 DLPRKFGNSTMFNESIAVAEYQGRPLADHISVKNGRPPGSLLVPRPPLDAPTVAEAVAVISCWYEDKTEWGDRIGWIYGS 747 (1044)
Q Consensus 668 ~~~~~fg~s~~~~~si~~~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~eA~~vasC~YE~~T~WGkevGw~~~s 747 (1044)
++ ||..++
T Consensus 332 --------------------vG----------------------------------------------------gf~~~~ 339 (802)
T 4hg6_A 332 --------------------AG----------------------------------------------------GFAGET 339 (802)
T ss_dssp --------------------HT----------------------------------------------------TCCCSS
T ss_pred --------------------cC----------------------------------------------------CcCCCC
Confidence 22 677788
Q ss_pred ccchHHHHHHHHhCCcEEEEeccCCccccccCCCCHHHHHHhhhhhhcchhHHHhhhcccccccCCcccccccchhcccc
Q 036064 748 VTEDVVTGYRMHNRGWRSVYCVTKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAILGTRRLKFLQRMAYLNTGI 827 (1044)
Q Consensus 748 vTED~~TglrLh~rGWrSvY~~p~~~af~GlAP~tL~~~l~QR~RWA~G~lQIl~sk~~pll~~~~Lsl~QRL~Yl~~~l 827 (1044)
++||.+++++++++|||++|++ .+.+++++|+++.++++||.||++|.+|+++. +++++ .+++++.+|++|+...+
T Consensus 340 ~~ED~~l~~rl~~~G~ri~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~q~l~~-~~pl~-~~~l~~~~rl~~l~~~~ 415 (802)
T 4hg6_A 340 ITEDAETALEIHSRGWKSLYID--RAMIAGLQPETFASFIQQRGRWATGMMQMLLL-KNPLF-RRGLGIAQRLCYLNSMS 415 (802)
T ss_dssp SSHHHHHHHHHHTTTCCEEECC--CCCEEECCCCSHHHHHHHHHHHHHHHHHHHHH-SCTTS-CSSCCHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHcCCeEEEec--CCEEEecCCCCHHHHHHHHHHHHccHHHHHHH-hCccc-cCCCCHHHHHHHHHHHH
Confidence 9999999999999999999996 36778999999999999999999999999984 56665 68899999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHhCCcccccchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhhhhhhHHhhhhHHHHHH
Q 036064 828 YPFTSIFLVTYCFLPAMCHFSGKFIVPNLNIAFLCYLLTITVTLTLISLLEVKWSGIGLEEWWRNEQFWVIGGSSAHLAA 907 (1044)
Q Consensus 828 y~l~sl~~LiylllPil~Ll~Gi~~vp~~s~~fliylLp~~ls~~l~slLe~rwsG~sl~~wWr~qr~WlI~~tsa~l~A 907 (1044)
+++.+++.++++++|+++++++..++......++.+++|+++...+...+ .. |.....|| ++.++.+.. ...+.+
T Consensus 416 ~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l~~~~~~~~--~~-~~~r~~~~-~~l~~~~~~-~~~~~a 490 (802)
T 4hg6_A 416 FWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAVSFLVQNA--LF-ARQRWPLV-SEVYEVAQA-PYLARA 490 (802)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHHHHHHHHH--HH-TTTSCTTH-HHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHHHHH--Hh-cCcHHHHH-HHHHHHHHH-HHHHHH
Confidence 99999999999999999999999999888777888888877654443211 12 22111233 333333221 122334
Q ss_pred HHHHHHHHHcCcccceEeCCCCCCCCccccccceEEeecchhhHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHH
Q 036064 908 VLQGLLKVIAGIEISFTLTTKSAAEDDEDMYADLYIIKWTSLFIVPLTIIVVNIVALVIGASRTIYSVLPQWGKLLGGSF 987 (1044)
Q Consensus 908 vi~aLlk~Lggk~~sF~VTpK~~~~~~~~~y~~~~~f~ws~l~iP~i~LlllnLvAiv~gi~r~v~~~~~~w~~l~g~l~ 987 (1044)
++.++ +++++.+|.||+|+...+. .+ + +.+++|++++++++++++++|+++...... ...+.++
T Consensus 491 ~l~~l---~~~~~~~f~VT~Kg~~~~~--~~-----~--~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~ 554 (802)
T 4hg6_A 491 IVTTL---LRPRSARFAVTAKDETLSE--NY-----I--SPIYRPLLFTFLLCLSGVLATLVRWVAFPG----DRSVLLV 554 (802)
T ss_dssp HHHHH---HSTTCCCCCCCCCCCCCSS--CC-----B--CTTCHHHHHHHHHHHHHHHHHHHHHHHCGG----GHHHHHH
T ss_pred HHHHH---hCCCCCcceECCCCccccc--cc-----h--hhHHHHHHHHHHHHHHHHHHHHHHHhccCC----ccchhhh
Confidence 44443 4568889999999876532 11 1 256789999999999999999999876542 1235678
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 036064 988 FSFWVLAHMYPFCKGLMG 1005 (1044)
Q Consensus 988 ~~~Wvl~nl~Pf~~gL~~ 1005 (1044)
+++|+++|++.+.-++..
T Consensus 555 ~~~w~~~~l~~l~~~~~~ 572 (802)
T 4hg6_A 555 VGGWAVLNVLLVGFALRA 572 (802)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 899999999999999864
|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* | Back alignment and structure |
|---|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
| >3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* | Back alignment and structure |
|---|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A | Back alignment and structure |
|---|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
| >3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* | Back alignment and structure |
|---|
| >2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... | Back alignment and structure |
|---|
| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* | Back alignment and structure |
|---|
| >1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* | Back alignment and structure |
|---|
| >2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1044 | |||
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 99.18 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 98.44 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 98.08 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 85.4 |
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.18 E-value=8e-11 Score=125.50 Aligned_cols=49 Identities=16% Similarity=0.116 Sum_probs=43.1
Q ss_pred CCCCCcccEEEeCCCCCCCChHHHHHHHHHHHcccCCCCCceEEEcCCCCch
Q 036064 279 RSDLPGVDVFVSTADPEKEPPLVTANTILSILAAEYPIEKLSAYISDDGGAI 330 (1044)
Q Consensus 279 ~~~lP~VDVFV~TaDP~kEPp~~v~nTVlS~la~DYP~~Kl~~YvsDDGgs~ 330 (1044)
++++|.|.|+|+|+ +|.......||-|++...||....-|.|.|||.+.
T Consensus 18 ~~~~P~vSIIIp~y---Ne~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d 66 (328)
T d1xhba2 18 PDNLPTTSVVIVFH---NEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASER 66 (328)
T ss_dssp CSCCCCEEEEEEES---SCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCC
T ss_pred CCCCCCEEEEEecc---CCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCCh
Confidence 47899999999999 88888888999999999999665679999999765
|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
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