Citrus Sinensis ID: 036177

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
Protein Sequence
MQSKSQCSLIFLLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLLFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccEEEEccccEEEEcccccccccccccccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccHHHHHHHHcccccccccccccccEEEEEEEccccEEEEEEcccccccHHHHHHHHHHHHHHcccccEEEEEccccccccEEEEEEEcccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccHHcccccccccccEEEcccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHEEEcccccccccEEEEcHHHHHHHHcccccccEEccccccEEEEEEcccccEEEEEEcEEEcHHHHHHHHHHHHHHHHHHcHHHHHHHcccccccccEEEEEEcccc
Coil and Loop (DISEMBL)
MQSKSQCSLIFLLKKLRatdidecldkekyhcegkckntigsytcdcpigmygdgkvgcrGFRIITIVAGCVVVLGLLFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQElssnegniektklftskdlekatdnykvsriigqggqgtvfkgmltdgRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG
Flexible Loop (DISEMBL)
MQSKSQCSLIFLLKKLRATDIDECLDKekyhcegkckntigsytcdCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLLFLLPIGLWRWYKFIKrrrkikrkqkffkrngglllrqelssnegniektklftskdlekatdnykvsriigqggqgtvfkGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG
Low Complexity Region (SEG)
MQSKSQCSLIFLLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIvagcvvvlgllfllpiglWRWYkfikrrrkikrkqkffkrNGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG
Disordered region (IsUnstruct)
******CSLIFLLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLLFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLR**********************KATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL**
Disordered Region (DISOPRED)
*********IFLLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLLFLLPIGLWRWYKFIK**********************************KLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSV***NVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG
Disordered Region (DISEMBL)
MQSKSQCSLIFLLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLLFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG
Disordered Region (DISPRO)
MQSKSQCSLIFLLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLLFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQSKSQCSLIFLLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLLFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	221	2.2.26 [Sep-21-2011]
Q7X8C5	748	Wall-associated receptor	no	no	0.859	0.254	0.524	8e-55
Q9S9M2	761	Wall-associated receptor	yes	no	0.859	0.249	0.539	1e-54
Q8GXQ3	642	Wall-associated receptor	no	no	0.855	0.294	0.532	1e-54
Q9C9L5	792	Wall-associated receptor	no	no	0.846	0.236	0.553	9e-54
Q9LMT9	764	Putative wall-associated	no	no	0.859	0.248	0.546	2e-53
Q9S9M5	730	Wall-associated receptor	no	no	0.855	0.258	0.526	2e-53
Q9LN59	788	Putative wall-associated	no	no	0.864	0.242	0.596	7e-53
Q8VYA3	769	Wall-associated receptor	no	no	0.846	0.243	0.546	2e-52
Q8RY17	751	Wall-associated receptor	no	no	0.859	0.252	0.563	9e-52
Q9SA25	720	Wall-associated receptor	no	no	0.832	0.255	0.529	5e-51

>sp|Q7X8C5|WAKLB_ARATH Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1

 Score =  213 bits (542), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 107/204 (52%), Positives = 150/204 (73%), Gaps = 14/204 (6%)

Query: 20  DIDEC-LDKEKYHCEGK-CKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGL 77
           D+DEC LD  +  C+ + C N  G + C              +  ++  ++ G V++   
Sbjct: 304 DVDECKLDIGRNQCKDQSCVNLPGWFDCQPK-----------KPEQLKRVIQG-VLIGSA 351

Query: 78  LFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEK 137
           L L   G++  YKF+++RRK+ R +KFF+RNGG+LL+Q+L+  EGN+E +++F+S +LEK
Sbjct: 352 LLLFAFGIFGLYKFVQKRRKLIRMRKFFRRNGGMLLKQQLARKEGNVEMSRIFSSHELEK 411

Query: 138 ATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
           ATDN+  +R++GQGGQGTV+KGML DGRIVAVK+SK+V E  VE+FINEVV+L+QINHRN
Sbjct: 412 ATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAVDEDRVEEFINEVVVLAQINHRN 471

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +VKLLGCCLETEVP+LVYEF+ NG
Sbjct: 472 IVKLLGCCLETEVPVLVYEFVPNG 495

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q9S9M2|WAKLD_ARATH Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2

 Score =  213 bits (541), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 110/204 (53%), Positives = 150/204 (73%), Gaps = 14/204 (6%)

Query: 20  DIDEC-LDKEKYHCEGK-CKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGL 77
           DIDEC L+  +  C+ + C N  G +TC+         K G    +I  +  G V++   
Sbjct: 312 DIDECKLEIGRKRCKDQSCVNKPGWFTCE-------PKKPG----QIKPVFQG-VLIGSA 359

Query: 78  LFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEK 137
           L L   G++  YKFIK++R+  R + FF+RNGG+LL+Q+L+  EGN+E +K+F+S +LEK
Sbjct: 360 LLLFAFGIFGLYKFIKKQRRSSRMRVFFRRNGGMLLKQQLARKEGNVEMSKIFSSNELEK 419

Query: 138 ATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
           ATDN+  +R++GQGGQGTV+KGML DGRIVAVK+SK++ E  VE+FINEVV+L+QINHRN
Sbjct: 420 ATDNFNTNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAMDEDKVEEFINEVVVLAQINHRN 479

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +VKLLGCCLETEVP+LVYEF+ NG
Sbjct: 480 IVKLLGCCLETEVPVLVYEFVPNG 503

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Plays a role in plant mineral nutrients response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8GXQ3|WAKLF_ARATH Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=2

 Score =  213 bits (541), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 108/203 (53%), Positives = 152/203 (74%), Gaps = 14/203 (6%)

Query: 20  DIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLL 78
           DIDEC  +  ++C EG C N  G+++C+  I                +++ G ++ LG+L
Sbjct: 322 DIDEC--EGHHNCGEGTCVNMPGTHSCEPKITKPEKA----------SVLQGVLISLGVL 369

Query: 79  FLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKA 138
             + +G+   YKFIK+R +I R + FFKRNGGLLL+Q+L +  GN++ +++F+SK+L+KA
Sbjct: 370 LFV-LGILGLYKFIKKRTRIIRNKNFFKRNGGLLLKQQLITKNGNVDMSRIFSSKELKKA 428

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
           TDN+ ++R++GQGGQGTV+KGML +GRIVAVK+SK V E  +E+FINEVV+LSQINHRN+
Sbjct: 429 TDNFSMNRVLGQGGQGTVYKGMLAEGRIVAVKRSKVVGEGKMEEFINEVVLLSQINHRNI 488

Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
           VKLLGCCLETEVP+LVYE+I NG
Sbjct: 489 VKLLGCCLETEVPVLVYEYIPNG 511

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9C9L5|WAKLH_ARATH Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1

 Score =  209 bits (533), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 113/204 (55%), Positives = 147/204 (72%), Gaps = 17/204 (8%)

Query: 20  DIDECLDKE--KYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGL 77
           DI+EC ++E   Y    KC N  G + C     +Y + +          +  G     G 
Sbjct: 338 DINECKEEEGMTYCGTNKCVNLQGHFKC-----VYNNHR---------PLAIGLGASFGS 383

Query: 78  LFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEK 137
           L  + +G++  YKFIK++RK+ +K+KFFKRNGGLLL+Q+L S  G +EKT +F+S++LEK
Sbjct: 384 LIFV-VGIYLLYKFIKKQRKLNQKKKFFKRNGGLLLQQQLISTVGMVEKTIVFSSRELEK 442

Query: 138 ATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
           AT+N+  +RI+GQGGQGTV+KGML DGRIVAVKKSK V E  +E+FINEVVILSQINHRN
Sbjct: 443 ATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRN 502

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +VKLLGCCLET+VP+LVYEFI NG
Sbjct: 503 IVKLLGCCLETKVPVLVYEFIPNG 526

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMT9|WAKLL_ARATH Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=2 SV=1

 Score =  209 bits (531), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 112/205 (54%), Positives = 145/205 (70%), Gaps = 15/205 (7%)

Query: 20  DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLLF 79
           DI+EC + +       C +T   Y   C   +   G   C  + I  ++ G    LG  F
Sbjct: 341 DINECTEYKN-----PCGDTRILYRNTC---INTSGGHRCIDYHIPEVMLG----LGAGF 388

Query: 80  LLPI---GLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLE 136
            + I   G+W W K +++RR   RK+KFFKRNGGLLL+Q+L++ +G +EKTKLF+S++LE
Sbjct: 389 FVLIVGGGIWWWRKLLRKRRMTNRKRKFFKRNGGLLLQQQLNTTQGRVEKTKLFSSRELE 448

Query: 137 KATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHR 196
           KATDN+  +R+IGQGGQGTV+KGML DGR VAVKKS  V E  +++FINEV+ILSQINHR
Sbjct: 449 KATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVKKSNVVDEDKLQEFINEVIILSQINHR 508

Query: 197 NVVKLLGCCLETEVPLLVYEFILNG 221
           +VVKLLGCCLETEVP+LVYEFI NG
Sbjct: 509 HVVKLLGCCLETEVPILVYEFIPNG 533

Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M5|WAKLA_ARATH Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1

 Score =  208 bits (530), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 109/207 (52%), Positives = 141/207 (68%), Gaps = 18/207 (8%)

Query: 20  DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLLF 79
           D D C        +  C N  G      P+ M       CR    IT      V+ G+L 
Sbjct: 315 DTDSCEGNHNCGEDAHCVNMPG------PMSM-------CRPNPKITKPTKPPVLQGILI 361

Query: 80  LLP-----IGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKD 134
            L      +GL+  +K IK+RR I R +KFFKRNGGLLL+Q+L++ +GN+E +K+F+SK+
Sbjct: 362 GLSGLVFFVGLFWLFKLIKKRRNINRSKKFFKRNGGLLLKQQLTTKDGNVEMSKIFSSKE 421

Query: 135 LEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN 194
           L KATDN+ + R++GQGGQGTV+KGML DG IVAVK+SK V E  +E+FINE+V+LSQIN
Sbjct: 422 LRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQIN 481

Query: 195 HRNVVKLLGCCLETEVPLLVYEFILNG 221
           HRN+VKLLGCCLETEVP+LVYE+I NG
Sbjct: 482 HRNIVKLLGCCLETEVPILVYEYIPNG 508

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LN59|WAKLK_ARATH Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2

 Score =  207 bits (526), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 121/203 (59%), Positives = 152/203 (74%), Gaps = 12/203 (5%)

Query: 20  DIDECLDKEKYHCEGKCKNTIGSYTC-DCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLL 78
           DI+ECL +  Y   G+ +N   S TC + P      G   C G +    + G     G+L
Sbjct: 339 DINECL-RNSY---GQRQNCRESDTCVNLP------GTFNCIGNKTRVTMIGVGSAFGIL 388

Query: 79  FLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKA 138
            L+ +G+W   KF+K+RR  KRK+KFFKRNGGLLL+Q+L++N+GN+EKT++F+S++LEKA
Sbjct: 389 VLV-VGIWWLRKFLKKRRMSKRKRKFFKRNGGLLLQQQLNTNKGNVEKTRIFSSRELEKA 447

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
           TDN+  SRI+GQGGQGTV+KGML DGR VAVKKSK V E  +E+FINEVVILSQINHR+V
Sbjct: 448 TDNFSESRILGQGGQGTVYKGMLVDGRTVAVKKSKVVDEDKLEEFINEVVILSQINHRHV 507

Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
           VKLLGCCLETEVP LVYEFI NG
Sbjct: 508 VKLLGCCLETEVPTLVYEFIPNG 530

Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8VYA3|WAKLJ_ARATH Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1

 Score =  205 bits (522), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 112/205 (54%), Positives = 150/205 (73%), Gaps = 18/205 (8%)

Query: 20  DIDEC---LDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLG 76
           DI+EC   +D       GKC N +G YTC+     Y + +          +V G      
Sbjct: 323 DINECVRGIDGNPVCTAGKCVNLLGGYTCE-----YTNHR---------PLVIGLSTSFS 368

Query: 77  LLFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLE 136
            L  +  G++  YKFI+R+R++ +K+KFFKRNGGLLL+Q+L++ EGN++ T++F S++LE
Sbjct: 369 TLVFIG-GIYWLYKFIRRQRRLNQKKKFFKRNGGLLLQQQLTTTEGNVDSTRVFNSRELE 427

Query: 137 KATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHR 196
           KAT+N+ ++RI+G+GGQGTV+KGML DGRIVAVKKSK V E  +E+FINEVVILSQINHR
Sbjct: 428 KATENFSLTRILGEGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHR 487

Query: 197 NVVKLLGCCLETEVPLLVYEFILNG 221
           N+VKLLGCCLET+VP+LVYEFI NG
Sbjct: 488 NIVKLLGCCLETDVPILVYEFIPNG 512

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8RY17|WAKLI_ARATH Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1

 Score =  203 bits (516), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 115/204 (56%), Positives = 152/204 (74%), Gaps = 14/204 (6%)

Query: 20  DIDECLDKEKYHCEGK--CKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGL 77
           DIDEC + +     G+  C N  GS+ C+    + G GK       I  +  G V+   L
Sbjct: 309 DIDECEEGKGLSSCGELTCVNVPGSWRCE----LNGVGK-------IKPLFPGLVLGFPL 357

Query: 78  LFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEK 137
           LFL+ +G+W   KF+K+RRKI RK+ FFKRNGGLLL+Q+L++  GN++ +K+F+SK+LEK
Sbjct: 358 LFLV-LGIWGLIKFVKKRRKIIRKRMFFKRNGGLLLKQQLTTRGGNVQSSKIFSSKELEK 416

Query: 138 ATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
           ATDN+ ++R++GQGGQGTV+KGML DGRIVAVK+SK + E  VE+FINEV +LSQINHRN
Sbjct: 417 ATDNFNMNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVGVLSQINHRN 476

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +VKL+GCCLETEVP+LVYE I NG
Sbjct: 477 IVKLMGCCLETEVPILVYEHIPNG 500

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Required during plant's response to pathogen infection.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9SA25|WAKLG_ARATH Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1

 Score =  200 bits (509), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 107/202 (52%), Positives = 140/202 (69%), Gaps = 18/202 (8%)

Query: 20  DIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLL 78
           DIDEC D     C + KC N +GSY C+             + +  I        +L L+
Sbjct: 284 DIDECRDPHLNKCGKRKCVNVLGSYRCE-------------KTWPAILSGTLSSGLLLLI 330

Query: 79  FLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKA 138
           F    G+W   K  ++R+  K+K+KFF+RNGGLLL+Q+ S   G++ +TK+F+S DLE A
Sbjct: 331 F----GMWLLCKANRKRKVAKQKRKFFQRNGGLLLQQQTSFLHGSVNRTKVFSSNDLENA 386

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
           TD +  SRI+GQGGQGTV+KGML DG IVAVKKSK++ E N+E+FINE+++LSQINHRNV
Sbjct: 387 TDRFNASRILGQGGQGTVYKGMLEDGMIVAVKKSKALKEENLEEFINEIILLSQINHRNV 446

Query: 199 VKLLGCCLETEVPLLVYEFILN 220
           VK+LGCCLETEVP+LVYEFI N
Sbjct: 447 VKILGCCLETEVPILVYEFIPN 468

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
225459920	736	PREDICTED: wall-associated receptor kina	0.909	0.273	0.608	1e-66
297734736	898	unnamed protein product [Vitis vinifera]	0.909	0.223	0.608	2e-66
147770821	724	hypothetical protein VITISV_023562 [Viti	0.909	0.277	0.603	5e-66
224075946	729	predicted protein [Populus trichocarpa]	0.864	0.262	0.596	3e-58
449455742	738	PREDICTED: wall-associated receptor kina	0.895	0.268	0.559	4e-58
449485245	717	PREDICTED: wall-associated receptor kina	0.895	0.276	0.559	5e-58
255545824	727	kinase, putative [Ricinus communis] gi|2	0.904	0.275	0.623	7e-58
255545828	694	kinase, putative [Ricinus communis] gi|2	0.914	0.291	0.566	1e-57
255541802	743	kinase, putative [Ricinus communis] gi|2	0.904	0.269	0.615	3e-57
359492355	745	PREDICTED: wall-associated receptor kina	0.909	0.269	0.561	8e-57

>gi|225459920|ref|XP_002264469.1| PREDICTED: wall-associated receptor kinase-like 8-like [Vitis vinifera]

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 123/202 (60%), Positives = 155/202 (76%), Gaps = 1/202 (0%)

Query: 20  DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLLF 79
           DIDEC +   Y CEG C+NT+G+Y+C CP GM+G+GKV CRG    T+  G  + LG L 
Sbjct: 280 DIDECSEPNIYQCEGICRNTVGNYSCRCPFGMHGEGKVACRGHHTATVFLGIGLSLGFLL 339

Query: 80  LLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKAT 139
            L  GL+R Y  +  +  IK K+KFFKRNGGLLL Q++SS++G +EK K FTS++LEKAT
Sbjct: 340 ALS-GLFRLYLLVHEQNSIKLKRKFFKRNGGLLLEQQISSDKGKLEKIKNFTSEELEKAT 398

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
           D+Y  +RI+GQGGQG V+K ML DG +VAVKKS+ + E  +E F+NEVVILSQINHR+VV
Sbjct: 399 DHYNDNRILGQGGQGIVYKAMLPDGNLVAVKKSEMMDEGQIEHFVNEVVILSQINHRHVV 458

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
           KLLGCCLETEVPLLVYE++ NG
Sbjct: 459 KLLGCCLETEVPLLVYEYVSNG 480

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734736|emb|CBI16970.3| unnamed protein product [Vitis vinifera]

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 123/202 (60%), Positives = 155/202 (76%), Gaps = 1/202 (0%)

Query: 20  DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLLF 79
           DIDEC +   Y CEG C+NT+G+Y+C CP GM+G+GKV CRG    T+  G  + LG L 
Sbjct: 173 DIDECSEPNIYQCEGICRNTVGNYSCRCPFGMHGEGKVACRGHHTATVFLGIGLSLGFLL 232

Query: 80  LLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKAT 139
            L  GL+R Y  +  +  IK K+KFFKRNGGLLL Q++SS++G +EK K FTS++LEKAT
Sbjct: 233 ALS-GLFRLYLLVHEQNSIKLKRKFFKRNGGLLLEQQISSDKGKLEKIKNFTSEELEKAT 291

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
           D+Y  +RI+GQGGQG V+K ML DG +VAVKKS+ + E  +E F+NEVVILSQINHR+VV
Sbjct: 292 DHYNDNRILGQGGQGIVYKAMLPDGNLVAVKKSEMMDEGQIEHFVNEVVILSQINHRHVV 351

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
           KLLGCCLETEVPLLVYE++ NG
Sbjct: 352 KLLGCCLETEVPLLVYEYVSNG 373

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147770821|emb|CAN76425.1| hypothetical protein VITISV_023562 [Vitis vinifera]

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 122/202 (60%), Positives = 154/202 (76%), Gaps = 1/202 (0%)

Query: 20  DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVVVLGLLF 79
           DIDEC +   Y CEG C+NT+G+Y+C CP GM+G+GKV CRG    T+  G  + LG L 
Sbjct: 268 DIDECXEPNIYQCEGICRNTVGNYSCRCPFGMHGEGKVACRGHHTATVFLGIGLSLGFLL 327

Query: 80  LLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKAT 139
            L  GL+R Y  +  +  IK K+K FKRNGGLLL Q++SS++G +EK K FTS++LEKAT
Sbjct: 328 ALS-GLFRLYLLVHEQNSIKLKRKXFKRNGGLLLEQQISSDKGKLEKIKNFTSEELEKAT 386

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
           D+Y  +RI+GQGGQG V+K ML DG +VAVKKS+ + E  +E F+NEVVILSQINHR+VV
Sbjct: 387 DHYNDNRILGQGGQGIVYKAMLPDGNLVAVKKSEMMDEGQIEHFVNEVVILSQINHRHVV 446

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
           KLLGCCLETEVPLLVYE++ NG
Sbjct: 447 KLLGCCLETEVPLLVYEYVSNG 468

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075946|ref|XP_002304841.1| predicted protein [Populus trichocarpa] gi|222842273|gb|EEE79820.1| predicted protein [Populus trichocarpa]

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/208 (59%), Positives = 153/208 (73%), Gaps = 17/208 (8%)

Query: 16  LRATDIDECLDKEKYHCEG--KCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCVV 73
           L  TDI+EC D  ++ C G  KC NT+GSY C+               + I+ I+   VV
Sbjct: 281 LGCTDINECKDPNRHSCLGITKCVNTLGSYKCEV------------NKYWIVPILV--VV 326

Query: 74  VLGLLFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSK 133
           + G+L LL  G+   YK  K+R+ I+ K+KFFKRNGGLLL+Q+LSSN G+++KTK+FTSK
Sbjct: 327 IAGILSLLA-GISWLYKLAKKRKNIELKRKFFKRNGGLLLQQQLSSNHGSVQKTKIFTSK 385

Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI 193
           +LE ATD +  +RI+GQGGQGTV+KGML DGRIVAVK+S  V E  +E+FINEVVILSQI
Sbjct: 386 ELETATDRFNENRILGQGGQGTVYKGMLEDGRIVAVKRSTIVGEEKLEEFINEVVILSQI 445

Query: 194 NHRNVVKLLGCCLETEVPLLVYEFILNG 221
           NHRNVVKL GCCLETEVPLLVYEFI NG
Sbjct: 446 NHRNVVKLFGCCLETEVPLLVYEFISNG 473

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455742|ref|XP_004145610.1| PREDICTED: wall-associated receptor kinase 2-like [Cucumis sativus]

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 117/209 (55%), Positives = 149/209 (71%), Gaps = 11/209 (5%)

Query: 20  DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV---GC----RGFRIITIVAGCV 72
           DIDEC       CEG C NT GSY C CP G YGDGK    GC    + F +I +  G  
Sbjct: 305 DIDECAGPNN-PCEGICVNTPGSYYCSCPHGSYGDGKKEGKGCINKTKQFPLIQLTVG-- 361

Query: 73  VVLGLLFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTS 132
           +   LLFL+    W ++  IK+R  IK ++KFF +NGG LLRQ+ S +E  ++ TK+FT+
Sbjct: 362 LASTLLFLVVTATWLYFT-IKKRNLIKLREKFFHQNGGFLLRQQSSQHEAAVDSTKIFTA 420

Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQ 192
           ++LEKATDNY  +RI+G+GG GTV+KG+L DG+ VA+KKSK   +S +EQFINEV+IL+Q
Sbjct: 421 EELEKATDNYAETRILGRGGNGTVYKGILPDGKTVAIKKSKIADKSQIEQFINEVIILTQ 480

Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
           I HRNVVKL+GCCLETEVPLLVYEF+ NG
Sbjct: 481 IKHRNVVKLMGCCLETEVPLLVYEFVSNG 509

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449485245|ref|XP_004157111.1| PREDICTED: wall-associated receptor kinase 2-like [Cucumis sativus]

 Score =  229 bits (585), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 117/209 (55%), Positives = 149/209 (71%), Gaps = 11/209 (5%)

Query: 20  DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV---GC----RGFRIITIVAGCV 72
           DIDEC       CEG C NT GSY C CP G YGDGK    GC    + F +I +  G  
Sbjct: 284 DIDECAGPNN-PCEGICVNTPGSYYCSCPHGSYGDGKKEGKGCINKTKQFPLIQLTVG-- 340

Query: 73  VVLGLLFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTS 132
           +   LLFL+    W ++  IK+R  IK ++KFF +NGG LLRQ+ S +E  ++ TK+FT+
Sbjct: 341 LASTLLFLVVTATWLYFT-IKKRNLIKLREKFFHQNGGFLLRQQSSQHEAAVDSTKIFTA 399

Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQ 192
           ++LEKATDNY  +RI+G+GG GTV+KG+L DG+ VA+KKSK   +S +EQFINEV+IL+Q
Sbjct: 400 EELEKATDNYAETRILGRGGNGTVYKGILPDGKTVAIKKSKIADKSQIEQFINEVIILTQ 459

Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
           I HRNVVKL+GCCLETEVPLLVYEF+ NG
Sbjct: 460 IKHRNVVKLMGCCLETEVPLLVYEFVSNG 488

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545824|ref|XP_002513972.1| kinase, putative [Ricinus communis] gi|223547058|gb|EEF48555.1| kinase, putative [Ricinus communis]

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 131/210 (62%), Positives = 152/210 (72%), Gaps = 10/210 (4%)

Query: 20  DIDECLD-KEKYHCEGKCKNTIGSYTCDCPIGM-------YGDGKVGCRGFRIITIVAGC 71
           D+ +C + K  Y+C+ KC    G Y C CP+         Y D     +  RI TI+ GC
Sbjct: 267 DVGKCTNPKNYYYCQLKCMYNRGGYNCPCPVEHHKEYSICYPDSAFAGKS-RIKTILIGC 325

Query: 72  VVVLGLLFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFT 131
              LGLL L+       YK IKRRR  K KQKFFKRNGGLLL Q+LSS E ++E+TK+FT
Sbjct: 326 GSGLGLLLLIIGIWLS-YKIIKRRRATKLKQKFFKRNGGLLLEQQLSSTESHVEQTKVFT 384

Query: 132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILS 191
           SK+LEKATDNY  SRI+GQGGQGTV+KGMLTDGR+VA+KKSK V E  ++QFINEVVILS
Sbjct: 385 SKELEKATDNYHTSRILGQGGQGTVYKGMLTDGRVVAIKKSKLVDEDKLDQFINEVVILS 444

Query: 192 QINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           QINHRNVVKL GCCLETEVPLLVYEFI NG
Sbjct: 445 QINHRNVVKLTGCCLETEVPLLVYEFIPNG 474

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545828|ref|XP_002513974.1| kinase, putative [Ricinus communis] gi|223547060|gb|EEF48557.1| kinase, putative [Ricinus communis]

 Score =  228 bits (582), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/212 (56%), Positives = 143/212 (67%), Gaps = 10/212 (4%)

Query: 20  DIDECLDKEK-YHCEGKCKNTIGSYTCDCPIGM---------YGDGKVGCRGFRIITIVA 69
           D ++C D+   Y+C   C    G Y C CP G          Y +     +       + 
Sbjct: 268 DPNKCPDQSSNYNCRLFCMYRPGGYNCPCPRGHGKYENSNRCYPNSVFWGKSRTKTKSII 327

Query: 70  GCVVVLGLLFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKL 129
                     LL IG+W  YK IKRRR +K KQ FFKRNGGLLL Q+LSS E  +E+TK+
Sbjct: 328 IGCGSGIGFLLLLIGIWSLYKIIKRRRAMKLKQNFFKRNGGLLLEQQLSSTENYVEQTKV 387

Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVI 189
           FTSK+LEKATD+Y  +RI+GQGGQGTV+KGML DGR+VA+KKSK V E  ++QFINEVVI
Sbjct: 388 FTSKELEKATDDYHTNRILGQGGQGTVYKGMLIDGRVVAIKKSKVVDEDKLDQFINEVVI 447

Query: 190 LSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           LSQINHRNVVKL+GCCLETEVPLLVYEFI NG
Sbjct: 448 LSQINHRNVVKLIGCCLETEVPLLVYEFIPNG 479

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541802|ref|XP_002511965.1| kinase, putative [Ricinus communis] gi|223549145|gb|EEF50634.1| kinase, putative [Ricinus communis]

 Score =  227 bits (579), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/216 (61%), Positives = 154/216 (71%), Gaps = 16/216 (7%)

Query: 16  LRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGC----------RGFRII 65
           L   DI+EC D +K  C   C NT GSY C CP G    G   C          R    I
Sbjct: 272 LSCQDINECEDSQKNKCSMICVNTPGSYKCSCPDGYISMGN-NCYLTDGYTERFRPVIAI 330

Query: 66  TIVAGCVVVLGLLFLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIE 125
            + AG    LG+ FLL IG W  YK  KRR+  K +Q+FFKRNGGLLL+Q+LSS+E +IE
Sbjct: 331 VLSAG----LGIPFLL-IGTWWLYKVQKRRKDAKLRQRFFKRNGGLLLQQQLSSSESSIE 385

Query: 126 KTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFIN 185
           KT +FT+K+LEKATD+Y  +RI+GQGGQGTV+KGMLTDG++VA+KKSK   ES  EQFIN
Sbjct: 386 KTNMFTAKELEKATDHYNENRILGQGGQGTVYKGMLTDGKVVAIKKSKIADESKTEQFIN 445

Query: 186 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           EVVILSQINHRNVVKLLGCCLETEVPLLVYEFI NG
Sbjct: 446 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG 481

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359492355|ref|XP_002284688.2| PREDICTED: wall-associated receptor kinase 2-like [Vitis vinifera]

 Score =  225 bits (574), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 114/203 (56%), Positives = 149/203 (73%), Gaps = 2/203 (0%)

Query: 20  DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCV-VVLGLL 78
           DIDEC D ++  C   C NT GSYTC CP G +G+G+    G     +    V + +GL+
Sbjct: 293 DIDECADPKRNECTKVCINTPGSYTCSCPKGYHGNGRRDENGDGCTPLFELNVGIFIGLI 352

Query: 79  FLLPIGLWRWYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKA 138
            LL    W ++  +K+R+ IK K+KFF++NGGL+L+Q+L   EG+ E  K+FT+++LEKA
Sbjct: 353 ALLITSSWLYWG-LKKRKFIKLKEKFFQQNGGLMLQQQLHGREGSSESVKIFTAEELEKA 411

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
           T+ Y    IIG+GG GTV+KG+L DGR+VA+KKSK V ++ +EQFINEVV+LSQINHRNV
Sbjct: 412 TNKYDEDTIIGRGGYGTVYKGILADGRVVAIKKSKLVDQTQIEQFINEVVVLSQINHRNV 471

Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
           VKLLGCCLETEVPLLVYEFI NG
Sbjct: 472 VKLLGCCLETEVPLLVYEFITNG 494

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
TAIR|locus:2019843	769	WAKL10 "WALL ASSOCIATED KINASE	0.515	0.148	0.719	2.1e-46
TAIR|locus:2200527	642	WAKL6 "wall associated kinase-	0.515	0.177	0.684	3e-45
TAIR|locus:2032875	720	AT1G16260 [Arabidopsis thalian	0.511	0.156	0.699	4.9e-45
TAIR|locus:2126316	786	AT4G31100 [Arabidopsis thalian	0.515	0.145	0.710	1.1e-44
TAIR|locus:2126271	793	AT4G31110 [Arabidopsis thalian	0.515	0.143	0.710	8.6e-44
TAIR|locus:2019893	751	RFO1 "RESISTANCE TO FUSARIUM O	0.515	0.151	0.692	1.1e-43
TAIR|locus:2016377	788	AT1G19390 [Arabidopsis thalian	0.515	0.144	0.763	5.1e-43
TAIR|locus:2200562	748	WAKL2 "wall associated kinase-	0.515	0.152	0.701	1e-41
TAIR|locus:2200552	730	WAKL1 "wall associated kinase-	0.515	0.156	0.692	1.9e-41
TAIR|locus:2030988	764	AT1G17910 [Arabidopsis thalian	0.515	0.149	0.728	2.5e-41

TAIR|locus:2019843 WAKL10 "WALL ASSOCIATED KINASE (WAK)-LIKE 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 451 (163.8 bits), Expect = 2.1e-46, Sum P(2) = 2.1e-46
 Identities = 82/114 (71%), Positives = 104/114 (91%)

Query:   108 NGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIV 167
             NGGLLL+Q+L++ EGN++ T++F S++LEKAT+N+ ++RI+G+GGQGTV+KGML DGRIV
Sbjct:   399 NGGLLLQQQLTTTEGNVDSTRVFNSRELEKATENFSLTRILGEGGQGTVYKGMLVDGRIV 458

Query:   168 AVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             AVKKSK V E  +E+FINEVVILSQINHRN+VKLLGCCLET+VP+LVYEFI NG
Sbjct:   459 AVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNG 512

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004383 "guanylate cyclase activity" evidence=IDA

GO:0006182 "cGMP biosynthetic process" evidence=IDA

GO:0006952 "defense response" evidence=IEP

GO:0009617 "response to bacterium" evidence=IEP

GO:0009620 "response to fungus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009723 "response to ethylene stimulus" evidence=RCA

TAIR|locus:2200527 WAKL6 "wall associated kinase-like 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 435 (158.2 bits), Expect = 3.0e-45, Sum P(2) = 3.0e-45
 Identities = 78/114 (68%), Positives = 103/114 (90%)

Query:   108 NGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIV 167
             NGGLLL+Q+L +  GN++ +++F+SK+L+KATDN+ ++R++GQGGQGTV+KGML +GRIV
Sbjct:   398 NGGLLLKQQLITKNGNVDMSRIFSSKELKKATDNFSMNRVLGQGGQGTVYKGMLAEGRIV 457

Query:   168 AVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             AVK+SK V E  +E+FINEVV+LSQINHRN+VKLLGCCLETEVP+LVYE+I NG
Sbjct:   458 AVKRSKVVGEGKMEEFINEVVLLSQINHRNIVKLLGCCLETEVPVLVYEYIPNG 511

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2032875 AT1G16260 [Arabidopsis thaliana (taxid:3702)]

 Score = 428 (155.7 bits), Expect = 4.9e-45, Sum P(2) = 4.9e-45
 Identities = 79/113 (69%), Positives = 98/113 (86%)

Query:   108 NGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIV 167
             NGGLLL+Q+ S   G++ +TK+F+S DLE ATD +  SRI+GQGGQGTV+KGML DG IV
Sbjct:   356 NGGLLLQQQTSFLHGSVNRTKVFSSNDLENATDRFNASRILGQGGQGTVYKGMLEDGMIV 415

Query:   168 AVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN 220
             AVKKSK++ E N+E+FINE+++LSQINHRNVVK+LGCCLETEVP+LVYEFI N
Sbjct:   416 AVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPN 468

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2126316 AT4G31100 [Arabidopsis thaliana (taxid:3702)]

 Score = 443 (161.0 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
 Identities = 81/114 (71%), Positives = 102/114 (89%)

Query:   108 NGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIV 167
             NGGLLL+QEL++ +G +EK ++FTSK+LEKAT+N+  +R++G GGQGTV+KGML DGR V
Sbjct:   410 NGGLLLQQELNTRQGVVEKARIFTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTV 469

Query:   168 AVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             AVKKSK + E  +++FINEVVILSQINHR+VVKLLGCCLETEVP+LVYEFI+NG
Sbjct:   470 AVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIING 523

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2126271 AT4G31110 [Arabidopsis thaliana (taxid:3702)]

 Score = 440 (159.9 bits), Expect = 8.6e-44, Sum P(2) = 8.6e-44
 Identities = 81/114 (71%), Positives = 101/114 (88%)

Query:   108 NGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIV 167
             NGGLLL QEL++ EG +EKT++F S++LEKAT+N+  +R++G GGQGTV+KGML DGR V
Sbjct:   419 NGGLLLLQELNTREGYVEKTRVFNSRELEKATENFSENRVLGHGGQGTVYKGMLVDGRTV 478

Query:   168 AVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             AVKKSK + E  +++FINEVVILSQINHR+VVKLLGCCLETEVP+LVYEFI+NG
Sbjct:   479 AVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIING 532

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2019893 RFO1 "RESISTANCE TO FUSARIUM OXYSPORUM 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 438 (159.2 bits), Expect = 1.1e-43, Sum P(2) = 1.1e-43
 Identities = 79/114 (69%), Positives = 102/114 (89%)

Query:   108 NGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIV 167
             NGGLLL+Q+L++  GN++ +K+F+SK+LEKATDN+ ++R++GQGGQGTV+KGML DGRIV
Sbjct:   387 NGGLLLKQQLTTRGGNVQSSKIFSSKELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRIV 446

Query:   168 AVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             AVK+SK + E  VE+FINEV +LSQINHRN+VKL+GCCLETEVP+LVYE I NG
Sbjct:   447 AVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNG 500

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005618 "cell wall" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009620 "response to fungus" evidence=IMP

TAIR|locus:2016377 AT1G19390 [Arabidopsis thaliana (taxid:3702)]

 Score = 461 (167.3 bits), Expect = 5.1e-43, P = 5.1e-43
 Identities = 87/114 (76%), Positives = 104/114 (91%)

Query:   108 NGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIV 167
             NGGLLL+Q+L++N+GN+EKT++F+S++LEKATDN+  SRI+GQGGQGTV+KGML DGR V
Sbjct:   417 NGGLLLQQQLNTNKGNVEKTRIFSSRELEKATDNFSESRILGQGGQGTVYKGMLVDGRTV 476

Query:   168 AVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             AVKKSK V E  +E+FINEVVILSQINHR+VVKLLGCCLETEVP LVYEFI NG
Sbjct:   477 AVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNG 530

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2200562 WAKL2 "wall associated kinase-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 448 (162.8 bits), Expect = 1.0e-41, P = 1.0e-41
 Identities = 80/114 (70%), Positives = 103/114 (90%)

Query:   108 NGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIV 167
             NGG+LL+Q+L+  EGN+E +++F+S +LEKATDN+  +R++GQGGQGTV+KGML DGRIV
Sbjct:   382 NGGMLLKQQLARKEGNVEMSRIFSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIV 441

Query:   168 AVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             AVK+SK+V E  VE+FINEVV+L+QINHRN+VKLLGCCLETEVP+LVYEF+ NG
Sbjct:   442 AVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNG 495

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2200552 WAKL1 "wall associated kinase-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 445 (161.7 bits), Expect = 1.9e-41, P = 1.9e-41
 Identities = 79/114 (69%), Positives = 102/114 (89%)

Query:   108 NGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIV 167
             NGGLLL+Q+L++ +GN+E +K+F+SK+L KATDN+ + R++GQGGQGTV+KGML DG IV
Sbjct:   395 NGGLLLKQQLTTKDGNVEMSKIFSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIV 454

Query:   168 AVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             AVK+SK V E  +E+FINE+V+LSQINHRN+VKLLGCCLETEVP+LVYE+I NG
Sbjct:   455 AVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNG 508

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005618 "cell wall" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2030988 AT1G17910 [Arabidopsis thaliana (taxid:3702)]

 Score = 445 (161.7 bits), Expect = 2.5e-41, P = 2.5e-41
 Identities = 83/114 (72%), Positives = 102/114 (89%)

Query:   108 NGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIV 167
             NGGLLL+Q+L++ +G +EKTKLF+S++LEKATDN+  +R+IGQGGQGTV+KGML DGR V
Sbjct:   420 NGGLLLQQQLNTTQGRVEKTKLFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSV 479

Query:   168 AVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             AVKKS  V E  +++FINEV+ILSQINHR+VVKLLGCCLETEVP+LVYEFI NG
Sbjct:   480 AVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNG 533

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	221
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-16
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-16
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-16
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-15
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-14
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-14
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-13
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-12
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-12
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	8e-11
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-10
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-10
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-09
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-09
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	6e-09
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	9e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-08
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-08
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-08
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	6e-08
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	8e-08
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	1e-07
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-07
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-07
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	2e-07
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-07
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-07
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	2e-07
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-07
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	3e-07
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	3e-07
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	5e-07
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	5e-07
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	8e-07
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-06
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-06
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-06
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-06
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-06
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-06
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-06
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	4e-06
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	5e-06
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	5e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	6e-06
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	6e-06
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	8e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	8e-06
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	8e-06
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-05
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	1e-05
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-05
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	2e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-05
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-05
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-05
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	2e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-05
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-05
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	2e-05
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	3e-05
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	5e-05
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	5e-05
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	5e-05
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	6e-05
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	6e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	6e-05
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	6e-05
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-05
pfam07645	42	pfam07645, EGF_CA, Calcium-binding EGF domain	8e-05
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	8e-05
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	9e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	9e-05
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-04
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-04
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-04
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	2e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-04
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	2e-04
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-04
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	2e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-04
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-04
pfam12947	36	pfam12947, EGF_3, EGF domain	3e-04
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	3e-04
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-04
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	4e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	4e-04
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-04
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-04
cd00053	36	cd00053, EGF, Epidermal growth factor domain, foun	5e-04
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	5e-04
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	5e-04
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	5e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	5e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	5e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	8e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	9e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	0.001
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	0.001
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	0.001
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	0.001
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	0.001
smart00181	35	smart00181, EGF, Epidermal growth factor-like doma	0.001
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	0.001
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	0.002
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	0.002
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.002
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	0.002
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	0.002
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	0.003
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	0.003
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	0.003
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	0.003
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	0.003
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	0.003
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	0.004
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.004
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.004
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.004
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	0.004
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	0.004

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 76.0 bits (188), Expect = 1e-16
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 143 KVSRIIGQGGQGTVFKGMLTD-----GRIVAVKKSKSVH-ESNVEQFINEVVILSQINHR 196
            + + +G+G  G V+KG L          VAVK  K    E  +E+F+ E  I+ +++H 
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61

Query: 197 NVVKLLGCCLETEVPLLVYEFILNG 221
           NVVKLLG C E E   +V E++  G
Sbjct: 62  NVVKLLGVCTEEEPLYIVMEYMEGG 86

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 75.3 bits (186), Expect = 2e-16
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 6/85 (7%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDG-----RIVAVKKSKSVH-ESNVEQFINEVVILSQINHR 196
            + + +G+G  G V+KG L          VAVK  K    E  +E+F+ E  I+ +++H 
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61

Query: 197 NVVKLLGCCLETEVPLLVYEFILNG 221
           N+VKLLG C E E  ++V E++  G
Sbjct: 62  NIVKLLGVCTEEEPLMIVMEYMPGG 86

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 75.3 bits (186), Expect = 2e-16
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)

Query: 146 RIIGQGGQGTVFKGMLTDG----RIVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVVK 200
           + +G+G  G V+KG L         VAVK  K    E   + F+ E  ++ ++ H NVV+
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 201 LLGCCLETEVPLLVYEFILNG 221
           LLG C E E   LV E++  G
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGG 81

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 72.9 bits (180), Expect = 1e-15
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 6/82 (7%)

Query: 146 RIIGQGGQGTVFKGMLTD-----GRIVAVKKSK-SVHESNVEQFINEVVILSQINHRNVV 199
           + +G+G  G V+KG L          VAVK  K    E   E+F+ E  I+ +++H N+V
Sbjct: 5   KKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIV 64

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
           +LLG C + E   +V E++  G
Sbjct: 65  RLLGVCTQGEPLYIVTEYMPGG 86

Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 68.8 bits (169), Expect = 3e-14
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 148 IGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
           +G+GG GTV+       G+ VA+K   K    S +E+ + E+ IL ++NH N+VKL G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 206 LETEVPLLVYEF 217
            +     LV E+
Sbjct: 61  EDENHLYLVMEY 72

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 68.7 bits (169), Expect = 4e-14
 Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEVVILSQINHRNVV 199
           Y++   +G+G  G V+       G++VA+K   K   + + E+ + E+ IL ++ H N+V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
           +L     + +   LV E+   G
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGG 82

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 65.7 bits (161), Expect = 5e-13
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 3/84 (3%)

Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK--SKSVHESNVEQFINEVVILSQINHRN 197
           NY++  +IG+G  G V+KG+ L  G  VA+K+   + + E  ++  + E+ +L  + H N
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +VK +G    ++   ++ E+  NG
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENG 84

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE--QFINEVVILSQINHRNV 198
           Y++ R +G G  GTV+K      G+IVAVK  K   E + +      E+ IL +++H N+
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
           V+L+    + +   LV E+   G
Sbjct: 61  VRLIDAFEDKDHLYLVMEYCEGG 83

Length = 260

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 63.7 bits (156), Expect = 3e-12
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 141 NYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSK--SVHESNVEQFINEVVILSQINHRN 197
            +    ++G+G  G+V+  +  D G ++AVK  +     E  +E    E+ ILS + H N
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN 60

Query: 198 VVKLLGCCLETE 209
           +V+  G   + E
Sbjct: 61  IVRYYGSERDEE 72

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 59.8 bits (145), Expect = 8e-11
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 146 RIIGQGGQGTVFKGMLT------DGRIVAVKKSKSVHESNVEQ-FINEVVILSQINHRNV 198
           R +G+G  G VF G         D  +VAVK  K    ++  + F  E  +L+   H N+
Sbjct: 11  RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENI 70

Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
           VK  G C E + P++V+E++ +G
Sbjct: 71  VKFYGVCTEGDPPIMVFEYMEHG 93

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 59.1 bits (144), Expect = 1e-10
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVK 200
           +++   IG+GG G V+K      G+ VA+K  K   +   E+ INE+ IL +  H N+VK
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 201 LLGCCLETEVPLLVYEFILNG 221
             G  L+ +   +V EF   G
Sbjct: 62  YYGSYLKKDELWIVMEFCSGG 82

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 58.6 bits (142), Expect = 2e-10
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 146 RIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNV-EQFINEVVILSQINHRNVVKLLGC 204
             IG+G  G V+KG+L     VAVK  +S    ++  +F+ E  IL Q +H N+VKL+G 
Sbjct: 1   EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGV 60

Query: 205 CLETEVPLLVYEFILNG 221
           C++ +   +V E +  G
Sbjct: 61  CVQKQPIYIVMELVPGG 77

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 17/91 (18%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQ-----FINEVVILSQI-- 193
           Y+    IG+G  GTV+K   L  GR VA+KK   V     E+      + E+ +L Q+  
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKK---VRVPLSEEGIPLSTLREIALLKQLES 57

Query: 194 -NHRNVVKLLGCC----LETEVPL-LVYEFI 218
             H N+V+LL  C     + E+ L LV+E +
Sbjct: 58  FEHPNIVRLLDVCHGPRTDRELKLTLVFEHV 88

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
            + YK    IG+G  G V+K      G+ VA+KK + + + N E  INE++I+    H N
Sbjct: 18  RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMR-LRKQNKELIINEILIMKDCKHPN 76

Query: 198 VVKLLGCCLETEVPLLVYEFI 218
           +V      L  +   +V E++
Sbjct: 77  IVDYYDSYLVGDELWVVMEYM 97

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 54.4 bits (131), Expect = 6e-09
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 6/82 (7%)

Query: 146 RIIGQGGQGTVFKGMLTDG----RIVAVKKSKSVHE-SNVEQFINEVVILSQINHRNVVK 200
           R+IG+G  G V+ G L D        AVK    + +   VEQF+ E +I+   +H NV+ 
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS 60

Query: 201 LLGCCLETE-VPLLVYEFILNG 221
           LLG CL +E  PL+V  ++ +G
Sbjct: 61  LLGICLPSEGSPLVVLPYMKHG 82

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 53.9 bits (130), Expect = 9e-09
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN--EVVILSQINHRNV 198
           Y+    IG+G  G V+K      G IVA+KK K   ES         E+ +L ++NH N+
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI 60

Query: 199 VKLL 202
           +KLL
Sbjct: 61  IKLL 64

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 53.2 bits (126), Expect = 2e-08
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 141 NYKVSRIIGQGGQGTVFKGMLTDGRIVAVK---KSKSVHESNVEQFINEVVILSQINH-R 196
           +Y++ R +G+G  G V+     D ++VA+K   K        VE+F+ E+ IL+ +NH  
Sbjct: 1   SYRILRKLGEGSFGEVYLA--RDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 197 NVVKLLGCCLETEVPLLVYEFILNG 221
           N+VKL     +     LV E++  G
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGG 83

Length = 384

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 52.3 bits (125), Expect = 3e-08
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)

Query: 147 IIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE-QFINEVVILSQINHRNVVKLLGCC 205
           ++G+G  G VFKG L D   VAVK  K      ++ +F++E  IL Q +H N+VKL+G C
Sbjct: 2   LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61

Query: 206 LETEVPLLVYEFILNG 221
            + +   +V E +  G
Sbjct: 62  TQRQPIYIVMELVPGG 77

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNV--EQFINEVVILSQINHR 196
           + Y+V  ++G+G  G V K      G IVA+KK K   +     +  + EV +L Q+ H 
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE 60

Query: 197 NVVKLLGCCLETEVPLLVYEFI 218
           N+V L           LV+E++
Sbjct: 61  NIVNLKEAFRRKGRLYLVFEYV 82

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 51.2 bits (123), Expect = 6e-08
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLL 202
           K+   IG+G  G V  G    G+ VAVK  K    +  + F+ E  +++ + H N+V+LL
Sbjct: 9   KLGATIGKGEFGDVMLGDYR-GQKVAVKCLKD-DSTAAQAFLAEASVMTTLRHPNLVQLL 66

Query: 203 GCCLETEVPLLVYEFILNG 221
           G  L+     +V E++  G
Sbjct: 67  GVVLQGNPLYIVTEYMAKG 85

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 51.1 bits (122), Expect = 8e-08
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 8/82 (9%)

Query: 147 IIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNV-------EQFINEVVILSQINHRNVV 199
           ++G+G  GTV+ G+   G+++AVK+   +  SNV       E+   EV +L  + H N+V
Sbjct: 7   VLGKGAYGTVYCGLTNQGQLIAVKQV-ELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
           + LG CL+     +  EF+  G
Sbjct: 66  QYLGTCLDDNTISIFMEFVPGG 87

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 46.5 bits (111), Expect = 1e-07
 Identities = 17/35 (48%), Positives = 18/35 (51%)

Query: 20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
          DIDEC         G C NT+GSY C CP G  G 
Sbjct: 1  DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYTGR 35

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQ---FINEVVILSQIN 194
             N+K+ + IG+G    V+K + L DGR+VA+KK +     + +     + E+ +L Q++
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 195 HRNVVKLLGCCLETEVPLLVYE 216
           H NV+K L   +E     +V E
Sbjct: 61  HPNVIKYLASFIENNELNIVLE 82

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 50.6 bits (122), Expect = 1e-07
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 7/82 (8%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQF----INEVVILSQINHR 196
           Y+    +G+G  G V+K      G IVA+KK +  +E   E      + E+ +L ++ H 
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE--EGIPSTALREISLLKELKHP 58

Query: 197 NVVKLLGCCLETEVPLLVYEFI 218
           N+VKLL          LV+E+ 
Sbjct: 59  NIVKLLDVIHTERKLYLVFEYC 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 12/91 (13%)

Query: 143 KVSRIIGQGGQGTVFKGMLT--DGRI--VAVK--KSKSVHESNVEQFINEVVILSQINHR 196
           K+ +I+G+G  G+V +G L+  DG    VAVK  K      S +E+F++E   +   +H 
Sbjct: 2   KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHP 61

Query: 197 NVVKLLGCCLETE------VPLLVYEFILNG 221
           NV+KL+G C E         P+++  F+ +G
Sbjct: 62  NVMKLIGVCFEASSLQKIPKPMVILPFMKHG 92

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 6/83 (7%)

Query: 141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFIN-----EVVILSQIN 194
            Y+  + +G+G    V+K      GRIVA+KK K       +  IN     E+ +L ++ 
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK 60

Query: 195 HRNVVKLLGCCLETEVPLLVYEF 217
           H N++ LL          LV+EF
Sbjct: 61  HPNIIGLLDVFGHKSNINLVFEF 83

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 165 RIVAVKKSK-SVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
            +VAVK  +    ++  E F+ EV ILS+++  N+ +LLG C       ++ E++ NG
Sbjct: 47  VLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENG 104

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 45.7 bits (109), Expect = 2e-07
 Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGK 56
          DIDEC         G C NT+GSY C+CP G Y DG+
Sbjct: 1  DIDECASGNPCQNGGTCVNTVGSYRCECPPG-YTDGR 36

Length = 39

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINHRNV 198
           Y+    IG+G  G V+K      G +VA+KK +  +E        I E+ +L ++ H N+
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNI 60

Query: 199 VKL 201
           V+L
Sbjct: 61  VRL 63

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 49.5 bits (118), Expect = 3e-07
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 8/84 (9%)

Query: 146 RIIGQGGQGTVFKGMLTD------GRI-VAVKK-SKSVHESNVEQFINEVVILSQINHRN 197
             +G G  G V++G  TD      G I VAVK   K   +   ++F+ E  ++S  NH N
Sbjct: 1   NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +VKLLG CL  E   ++ E +  G
Sbjct: 61  IVKLLGVCLLNEPQYIIMELMEGG 84

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 49.2 bits (117), Expect = 3e-07
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 148 IGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVE-QFINEVVILSQINHRNVVKLLGCC 205
           IG+G  G VF G L  D   VAVK  +     +++ +F+ E  IL Q +H N+V+L+G C
Sbjct: 3   IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62

Query: 206 LETEVPLLVYEFILNG 221
            + +   +V E +  G
Sbjct: 63  TQKQPIYIVMELVQGG 78

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 7/93 (7%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVK---KSKSVHESNVEQ----FINEVV 188
           E   D+  + R +G G  G V++G+       AV+     K++ ES  EQ    F+ E +
Sbjct: 2   EVPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEAL 61

Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           I+S+ NH+N+V+L+G   E     ++ E +  G
Sbjct: 62  IMSKFNHQNIVRLIGVSFERLPRFILLELMAGG 94

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 48.8 bits (116), Expect = 5e-07
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 141 NYKVSRIIGQGGQGTVFKGMLTD--GR----IVAVKK-SKSVHESNVEQFINEVVILSQI 193
           N  + + +G+G  G V K       GR     VAVK   ++   S +   ++E  +L Q+
Sbjct: 1   NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV 60

Query: 194 NHRNVVKLLGCCLETEVPLLVYEF 217
           NH +V+KL G C +    LL+ E+
Sbjct: 61  NHPHVIKLYGACSQDGPLLLIVEY 84

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 48.0 bits (114), Expect = 8e-07
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
               + + IG G  G V+ G   + R VA+K  +    S  E FI E  ++ +++H  +V
Sbjct: 4   SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE-EDFIEEAQVMMKLSHPKLV 62

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
           +L G C E     LV+EF+ +G
Sbjct: 63  QLYGVCTERSPICLVFEFMEHG 84

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 7/93 (7%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFK----GMLT--DGRIVAVKKSKSVHESNVE-QFINEVV 188
           E   +N +  R IGQG  G VF+    G+L      +VAVK  K    ++++  F  E  
Sbjct: 1   EYPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 60

Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           ++++ +H N+VKLLG C   +   L++E++  G
Sbjct: 61  LMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYG 93

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)

Query: 148 IGQGGQGTVFKGMLT------DGRIVAVKKSKSVHESNVEQ-FINEVVILSQINHRNVVK 200
           +G+G  G V+KG LT          VA+K  K   E  V+Q F  E  ++S + H N+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 201 LLGCCLETEVPLLVYEFILNG 221
           LLG C + +   +++E++ +G
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHG 93

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 5/84 (5%)

Query: 143 KVSRIIGQGGQGTVFKGMLT----DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRN 197
            + ++IG G  G V +G L         VA+K  K+   +     F+ E  I+ Q +H N
Sbjct: 7   TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPN 66

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +++L G   ++   +++ E++ NG
Sbjct: 67  IIRLEGVVTKSRPVMIITEYMENG 90

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 47.1 bits (113), Expect = 1e-06
 Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKS--KSVHESNVEQFINEVVILSQINHRN 197
            Y++ + IG+G  G V+     +DG++  +K+    ++ E   E  +NEV IL ++NH N
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60

Query: 198 VVKL 201
           ++K 
Sbjct: 61  IIKY 64

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 141 NYKVSRIIGQGGQGTVFK-GMLTDGRIVAVKK--SKSVHESNVEQFINEVVILSQINHRN 197
            YK+   IG+G  G VFK      G  VA+KK   + +      Q + E+  L    H  
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY 60

Query: 198 VVKLLGCCLETEVPLLVYEFIL 219
           VVKLL         +LV E++ 
Sbjct: 61  VVKLLDVFPHGSGFVLVMEYMP 82

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE--QFINEVVILSQINHRNV 198
           Y+V   IG+G  GTV K    +DG+I+  K+    + +  E  Q ++EV IL ++ H N+
Sbjct: 2   YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI 61

Query: 199 VK 200
           V+
Sbjct: 62  VR 63

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 13/92 (14%)

Query: 140 DNYKVSRIIGQGGQGTVFKGML-------TDGRIVAVK---KSKSVHESNVEQFINEVVI 189
           +   + R +GQG  G V++G+         + R VA+K   ++ S+ E    +F+NE  +
Sbjct: 6   EKITLIRELGQGSFGMVYEGLAKGVVKGEPETR-VAIKTVNENASMRERI--EFLNEASV 62

Query: 190 LSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           + + N  +VV+LLG     +  L+V E +  G
Sbjct: 63  MKEFNCHHVVRLLGVVSTGQPTLVVMELMAKG 94

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)

Query: 145 SRIIGQGGQGTVFKGMLT---DGRI-VAVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
            R IG+G  G V++G+     + +I VAVK  K+    S  E+F+ E  I+ Q +H ++V
Sbjct: 11  GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIV 70

Query: 200 KLLGCCLE 207
           KL+G   E
Sbjct: 71  KLIGVITE 78

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 45.8 bits (108), Expect = 5e-06
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 148 IGQGGQGTVFKGML------TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKL 201
           +G+G  G VF           D  +VAVK  K   ES  + F  E  +L+ + H+++V+ 
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72

Query: 202 LGCCLETEVPLLVYEFILNG 221
            G C E    L+V+E++ +G
Sbjct: 73  YGVCTEGRPLLMVFEYMRHG 92

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 45.7 bits (108), Expect = 5e-06
 Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 5/81 (6%)

Query: 146 RIIGQGGQGTVFKGML-TDGR---IVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVVK 200
           ++IG G  G VF+G+L   GR    VA+K  K  + E   + F++E  I+ Q +H N+++
Sbjct: 11  KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIR 70

Query: 201 LLGCCLETEVPLLVYEFILNG 221
           L G   + +  +++ E++ NG
Sbjct: 71  LEGVVTKFKPAMIITEYMENG 91

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 7/70 (10%)

Query: 138 ATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQF----INEVVILSQ 192
              +Y++   +G+G  G V+K   +  GR+VA+KK   +H    + F    + E+ IL +
Sbjct: 6   KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKI-LMHNEK-DGFPITALREIKILKK 63

Query: 193 INHRNVVKLL 202
           + H NVV L+
Sbjct: 64  LKHPNVVPLI 73

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 45.4 bits (108), Expect = 6e-06
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)

Query: 148 IGQGGQGTVFKGM-LTDGRIVAVKKSKSVHE--SNVEQFINEVVILSQINHRNVVKLLG 203
           IG G  G V+  + L  G ++AVK+ +        +++  +E+ +L  + H N+VK  G
Sbjct: 8   IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYG 66

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 45.2 bits (107), Expect = 8e-06
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 7/101 (6%)

Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTV-FKGMLTDGRIVAVKKSKSVHESNVE 181
           + E  +LF+  D EK    +   R IG G  G V F   +    +VA+KK     + + E
Sbjct: 1   DPEIAELFSKDDPEKL---FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNE 57

Query: 182 QF---INEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL 219
           ++   I EV  L Q+ H N ++  GC L      LV E+ L
Sbjct: 58  KWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL 98

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 45.0 bits (107), Expect = 8e-06
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 6/74 (8%)

Query: 148 IGQGGQGTVFKG--MLTDGRI--VAVKKSKSVHE-SNVEQFINEVVILSQINHRNVVKLL 202
           +G G  G+V KG  ++  G+   VAVK  K  H  +  ++F+ E  +++Q++H  +V+L+
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 203 GCCLETEVPLLVYE 216
           G C   E  +LV E
Sbjct: 63  GVCKG-EPLMLVME 75

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 45.1 bits (107), Expect = 8e-06
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 7/79 (8%)

Query: 147 IIGQGGQGTVFKGMLT------DGRIVAVKKSKSVHESNVEQ-FINEVVILSQINHRNVV 199
            +G+G  G VF              +V VK  +   + N++  F  E+ +  +++H+NVV
Sbjct: 12  TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVV 71

Query: 200 KLLGCCLETEVPLLVYEFI 218
           +LLG C E E   ++ E+ 
Sbjct: 72  RLLGLCREAEPHYMILEYT 90

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 44.4 bits (106), Expect = 1e-05
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 5/81 (6%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN--EVVILSQIN-HRN 197
           YKV + +G G  G+V+       G +VA+KK K    S  E+ +N  EV  L ++N H N
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPN 59

Query: 198 VVKLLGCCLETEVPLLVYEFI 218
           +VKL     E +    V+E++
Sbjct: 60  IVKLKEVFRENDELYFVFEYM 80

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 7/71 (9%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQF----INEVVIL 190
           ++  D + +   IG+G  G V+K    D G +VA+KK +  +E   E F    I E+ IL
Sbjct: 3   KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK--EGFPITAIREIKIL 60

Query: 191 SQINHRNVVKL 201
            Q+NHRN+V L
Sbjct: 61  RQLNHRNIVNL 71

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 148 IGQGGQGTVFKGM-LTDGRIVAVKKSK--SVHESNVEQFINEVVILSQINHRNVVKLLGC 204
           IG+G  G V+KG     G+IVA+KK +  S  E      I E+ +L ++ H N+V L   
Sbjct: 8   IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDV 67

Query: 205 CLETEVPLLVYEFI 218
            ++     L++EF+
Sbjct: 68  LMQESRLYLIFEFL 81

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 12/113 (10%)

Query: 121 EGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI--VAVK 170
           EGN    I+ T+L  ++  E   DN +  + +G G  G V +    G+  +  +  VAVK
Sbjct: 15  EGNNYTFIDPTQLPYNEKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVK 74

Query: 171 KSK-SVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
             K S H    E  ++E+ ILS +  H+N+V LLG C      L++ E+   G
Sbjct: 75  MLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYG 127

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 9/76 (11%)

Query: 151 GGQ-GTVFKGMLTD-GRIVAVKKSKSVHESN--VEQFINEVVILSQINHRNVVKLLGCCL 206
           GGQ G V++G+       VAVK  K   E    VE+F+ E  ++ +I H N+V+LLG C 
Sbjct: 16  GGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 72

Query: 207 ETEVPL-LVYEFILNG 221
             E P  ++ EF+  G
Sbjct: 73  R-EPPFYIITEFMTYG 87

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 43.9 bits (103), Expect = 2e-05
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 141 NYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKSVHESNVEQFINEVVILSQIN 194
           N  + R +G+G  G VF           D  +VAVK  K   ++  + F  E  +L+ + 
Sbjct: 6   NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 65

Query: 195 HRNVVKLLGCCLETEVPLLVYEFILNG 221
           H ++VK  G C+E +  ++V+E++ +G
Sbjct: 66  HEHIVKFYGVCVEGDPLIMVFEYMKHG 92

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 43.8 bits (103), Expect = 2e-05
 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 8/82 (9%)

Query: 143 KVSRIIGQGGQGTVFKGMLTD--GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVK 200
           K+ + IG+G  G V   ML D  G  VAVK  K  +++  + F+ E  +++Q+ H N+V+
Sbjct: 9   KLLQTIGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQ 63

Query: 201 LLGCCLETEVPL-LVYEFILNG 221
           LLG  +E +  L +V E++  G
Sbjct: 64  LLGVIVEEKGGLYIVTEYMAKG 85

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHES--NVEQFINEVVILSQINHRNVVKLLGCC 205
           +G G  G V  G       VA+K    + E   + + FI E  ++ +++H N+V+L G C
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIK---MIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVC 68

Query: 206 LETEVPLLVYEFILNG 221
            +     +V E++ NG
Sbjct: 69  TKQRPIFIVTEYMANG 84

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 3/59 (5%)

Query: 147 IIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGC 204
            +G+G  G+V+K +    G++VA+K      E ++++ I E+ IL Q +   +VK  G 
Sbjct: 10  KLGEGSYGSVYKAIHKETGQVVAIKVVPV--EEDLQEIIKEISILKQCDSPYIVKYYGS 66

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQF----INEVVILSQIN 194
             Y+    IGQG  G VFK       +IVA+KK    +E   E F    + E+ IL  + 
Sbjct: 12  SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK--EGFPITALREIKILQLLK 69

Query: 195 HRNVVKLLGCC 205
           H NVV L+  C
Sbjct: 70  HENVVNLIEIC 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 43.9 bits (103), Expect = 2e-05
 Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 11/89 (12%)

Query: 144 VSRIIGQGGQGTVFKGMLT-DGRI--VAVKKSKSV--HESNVEQFINEVVILSQINHRNV 198
           + + +G+G  G+V +G L  D  I  VAVK  K      S +E F++E V + + +H NV
Sbjct: 3   LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNV 62

Query: 199 VKLLGCCLETE------VPLLVYEFILNG 221
           ++L+G CL+T        P+++  F+ +G
Sbjct: 63  MRLIGVCLQTVESEGYPSPVVILPFMKHG 91

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 43.9 bits (103), Expect = 3e-05
 Identities = 26/78 (33%), Positives = 50/78 (64%), Gaps = 8/78 (10%)

Query: 143 KVSRIIGQGGQGTVFKGM-LTDGRIVAVKKS-KSVHES-----NVEQFINEVVILSQINH 195
           K  +++G G  GTV+KG+ + +G  V +  + K ++E+     NVE F++E +I++ ++H
Sbjct: 10  KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDH 68

Query: 196 RNVVKLLGCCLETEVPLL 213
            ++V+LLG CL   + L+
Sbjct: 69  PHLVRLLGVCLSPTIQLV 86

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNV 198
           Y++ + IG G  G V   +    GR VA+KK  +V     + ++ + E+ +L  + H N+
Sbjct: 2   YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENI 61

Query: 199 VKLL 202
           + LL
Sbjct: 62  IGLL 65

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 8/85 (9%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD---GRIVAVKKSKSVHESNVEQFINEVVILSQINHR 196
           DN+     IG+G  G V   + TD   GR VAVKK     +   E   NEVVI+    H 
Sbjct: 22  DNFVK---IGEGSTGIVC--IATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHP 76

Query: 197 NVVKLLGCCLETEVPLLVYEFILNG 221
           N+V++    L  +   +V EF+  G
Sbjct: 77  NIVEMYSSYLVGDELWVVMEFLEGG 101

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 148 IGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFI-NEVVILSQINHRNVVKLLG 203
           +GQG  G V+K      G+I A+KK     +    + +  E+  L       VVK  G
Sbjct: 9   LGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYG 66

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 42.9 bits (101), Expect = 5e-05
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 143 KVSRIIGQGGQGTVFKGMLT-DGR---IVAVKKSKSVH-ESNVEQFINEVVILSQINHRN 197
           K+  +IG G  G V +G L   G+    VA+K  KS + E     F++E  I+ Q +H N
Sbjct: 7   KIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 66

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           ++ L G   ++   +++ EF+ NG
Sbjct: 67  IIHLEGVVTKSRPVMIITEFMENG 90

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 42.6 bits (100), Expect = 5e-05
 Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 8/88 (9%)

Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI 193
           +L+K T    +  IIG+G  G V +G  T G+ VAVK  K   +   + F+ E  +++++
Sbjct: 4   NLQKLT----LGEIIGEGEFGAVLQGEYT-GQKVAVKNIKC--DVTAQAFLEETAVMTKL 56

Query: 194 NHRNVVKLLGCCLETEVPLLVYEFILNG 221
           +H+N+V+LLG  L   +  +V E +  G
Sbjct: 57  HHKNLVRLLGVILHNGL-YIVMELMSKG 83

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 42.9 bits (101), Expect = 6e-05
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 5/75 (6%)

Query: 148 IGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINHRNVVKLLGC 204
           IG+G  G V+K      G +VA+KK +   E+       I E+ +L ++NH N+VKLL  
Sbjct: 8   IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD- 66

Query: 205 CLETEVPL-LVYEFI 218
            + TE  L LV+EF+
Sbjct: 67  VIHTENKLYLVFEFL 81

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 42.4 bits (100), Expect = 6e-05
 Identities = 22/86 (25%), Positives = 42/86 (48%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINH 195
           E+  + + + R +G G  G V++G+  +   VA+K  KS      + F  EV  L ++ H
Sbjct: 2   ERPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRH 61

Query: 196 RNVVKLLGCCLETEVPLLVYEFILNG 221
           ++++ L   C   E   ++ E +  G
Sbjct: 62  KHLISLFAVCSVGEPVYIITELMEKG 87

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 24/75 (32%), Positives = 48/75 (64%), Gaps = 8/75 (10%)

Query: 146 RIIGQGGQGTVFKGMLT-DGR----IVAVK--KSKSVHESNVEQFINEVVILSQINHRNV 198
           +++G G  GTV+KG+   +G      VA+K  + ++  ++N E  ++E  +++ ++H +V
Sbjct: 13  KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKE-ILDEAYVMASVDHPHV 71

Query: 199 VKLLGCCLETEVPLL 213
           V+LLG CL ++V L+
Sbjct: 72  VRLLGICLSSQVQLI 86

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 42.3 bits (100), Expect = 6e-05
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 148 IGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINHRNVVKLLGC 204
           IG+G  G V+K      G IVA+KK +   E        I E+ +L ++NH N+V+LL  
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDV 66

Query: 205 CLETEVPLLVYEFI 218
                   LV+EF+
Sbjct: 67  VHSENKLYLVFEFL 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 140 DNYKVSRIIGQGGQGTVFKG-MLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
           ++Y++ + IG G  G V+K   +  G +VA+K  K     + E    E+ +L +  H N+
Sbjct: 3   EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNI 62

Query: 199 VKLLG 203
           V   G
Sbjct: 63  VAYFG 67

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|219496 pfam07645, EGF_CA, Calcium-binding EGF domain

 Score = 38.5 bits (90), Expect = 8e-05
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 4/41 (9%)

Query: 20 DIDECLDKEKYHCE--GKCKNTIGSYTCDCPIGMYGDGKVG 58
          D+DEC D   ++C     C NTIGS+ C CP G Y + + G
Sbjct: 1  DVDECAD-GTHNCPANTVCVNTIGSFECVCPDG-YENNEDG 39

Length = 42

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 42.3 bits (99), Expect = 8e-05
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 148 IGQGGQGTV-FKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
           IG+G  G V    + + G++VAVKK     +   E   NEVVI+    H NVV++    L
Sbjct: 28  IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87

Query: 207 ETEVPLLVYEFILNG 221
             +   +V EF+  G
Sbjct: 88  VGDELWVVMEFLEGG 102

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 42.1 bits (100), Expect = 9e-05
 Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)

Query: 148 IGQGGQGTVFKGMLTD-GRIVAVK---KSKSVHESNVEQFINEVVILSQINHRNVVKLLG 203
           +G+G  G V      D G++ A+K   K K +    VE  + E  ILS+INH  +VKL  
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLH- 59

Query: 204 CCLETEVPL-LVYEFILNG 221
              +TE  L LV E+   G
Sbjct: 60  YAFQTEEKLYLVLEYAPGG 78

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 1/79 (1%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLL 202
           K+ R +G G  G V+ G       VAVK  K    S  E F+ E  I+ ++ H  +V+L 
Sbjct: 9   KLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS-PEAFLQEAQIMKKLRHDKLVQLY 67

Query: 203 GCCLETEVPLLVYEFILNG 221
             C E E   +V E++  G
Sbjct: 68  AVCSEEEPIYIVTEYMSKG 86

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 148 IGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
           IGQG  GTV+  + +  G+ VA+K+     +   E  INE++++ +  H N+V  L   L
Sbjct: 27  IGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL 86

Query: 207 ETEVPLLVYEFILNG 221
             +   +V E++  G
Sbjct: 87  VGDELWVVMEYLAGG 101

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 8/87 (9%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESN-----VEQFINEVVILSQINH 195
           ++   ++G G  G+V++G+ L DG   AVK+     +       V+Q   E+ +LS++ H
Sbjct: 2   WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH 61

Query: 196 RNVVKLLGCCLETEVPLLVY-EFILNG 221
            N+V+ LG   E +  L ++ E +  G
Sbjct: 62  PNIVQYLGTEREED-NLYIFLELVPGG 87

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 6/86 (6%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK---SKSVHESNVEQFINEVVILSQINH 195
           D+Y++  +IG G    V+  + L +   VA+K+    K   +++V++   EV  +SQ NH
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC--QTSVDELRKEVQAMSQCNH 58

Query: 196 RNVVKLLGCCLETEVPLLVYEFILNG 221
            NVVK     +  +   LV  ++  G
Sbjct: 59  PNVVKYYTSFVVGDELWLVMPYLSGG 84

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 8/90 (8%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLT-----DGRIVAVKKSKSVHESNVEQ-FINEVVILSQI 193
            + K  + +G+G  G V            G  VAVK      E      F  E+ IL  +
Sbjct: 4   RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL 63

Query: 194 NHRNVVKLLGCCLET--EVPLLVYEFILNG 221
           +H N+VK  G C +       L+ E++ +G
Sbjct: 64  DHENIVKYKGVCEKPGGRSLRLIMEYLPSG 93

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
           D+++  + +G G  G V        G+  A+K   K+K V    VE  +NE  IL  I H
Sbjct: 1   DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH 60

Query: 196 RNVVKLLGC 204
             +V L G 
Sbjct: 61  PFLVNLYGS 69

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 23/78 (29%), Positives = 47/78 (60%), Gaps = 6/78 (7%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDG---RI-VAVKKSKSVHESNVEQFI-NEVVILSQINH 195
           +K  +++G G  GTV+KG+ + +G   +I VA+K+ +        + I +E  +++ +++
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68

Query: 196 RNVVKLLGCCLETEVPLL 213
            +V +LLG CL + V L+
Sbjct: 69  PHVCRLLGICLTSTVQLI 86

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 10/120 (8%)

Query: 104 FFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDN-----YKVSRIIGQGGQGTVFK 158
           F +    L L++    NE    + + F SK  +  T N      K   +I +G +G  +K
Sbjct: 651 FIRGRNNLELKR--VENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYK 708

Query: 159 GMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI 218
           G      +  V K  +   S     I +   + ++ H N+VKL+G C   +   L++E+I
Sbjct: 709 GKSIKNGMQFVVKEINDVNSIPSSEIAD---MGKLQHPNIVKLIGLCRSEKGAYLIHEYI 765

Length = 968

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 146 RIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVE-QFINEVVILSQINHRNVVK 200
             IG G  GTV+K +    GR+ A+K     HE  V  Q   E+ IL  +NH NVVK
Sbjct: 80  NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVK 136

Length = 353

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVK---KSKSVHESNVEQFINEVVILSQIN- 194
           D++K  +IIG+G   TV         +  A+K   K + + E  V+    E  +L+++N 
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60

Query: 195 HRNVVKLLGCCLETEVPLLVYEFILNG 221
           H  ++KL     + E    V E+  NG
Sbjct: 61  HPGIIKLYYTFQDEENLYFVLEYAPNG 87

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 8/106 (7%)

Query: 124 IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GML-TDGRI-VAVKKSK-SVH 176
           I+ T+L      E   +     + +G G  G V +    G+  +D  + VAVK  K S H
Sbjct: 19  IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH 78

Query: 177 ESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
            +  E  ++E+ +LS + NH N+V LLG C      L++ E+   G
Sbjct: 79  LTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYG 124

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 12/92 (13%)

Query: 142 YKVSRIIGQGGQGTVFKGMLT----DGRIVAVK--KSKSVHESNVEQFINEVVILSQINH 195
           + + R++G+G  G+V +  L       + VAVK  K+     S++E+F+ E   + + +H
Sbjct: 1   FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH 60

Query: 196 RNVVKLLGCCLETE------VPLLVYEFILNG 221
            NV+KL+G  L +       +P+++  F+ +G
Sbjct: 61  PNVIKLIGVSLRSRAKGRLPIPMVILPFMKHG 92

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 17/57 (29%), Positives = 37/57 (64%), Gaps = 1/57 (1%)

Query: 166 IVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           +VAVK  ++ V ++    F+ E+ I+S++ + N+++LLG C+  +   ++ E++ NG
Sbjct: 46  LVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENG 102

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 147 IIGQGGQGTVFKGM-LTDGRIVAVK---------KSKSVHESNVEQFINEVVILSQINHR 196
           +IG G  G+V+ GM  + G ++AVK          SK    S ++    E+ +L ++ H 
Sbjct: 7   LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66

Query: 197 NVVKLLGCCLETEVPLLVYEFILNG 221
           N+V+ LG  L+ +   +  E++  G
Sbjct: 67  NIVQYLGSSLDADHLNIFLEYVPGG 91

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 125 EKTKLFTSKDLEKATDNYKVSRIIGQGGQGTV-FKGMLTDGRIVAVKK-SKSVHESNV-- 180
           +  +LF   D EK    +   R IG G  G V F   + +  +VA+KK S S  +SN   
Sbjct: 3   DVAELFFKDDPEKL---FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW 59

Query: 181 EQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL 219
           +  I EV  L ++ H N ++  GC L      LV E+ L
Sbjct: 60  QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 98

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 40.9 bits (95), Expect = 2e-04
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 5/97 (5%)

Query: 128 KLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD---GRIVAVKKSKSVHESNVEQFI 184
           KL T   +      Y     IGQG  GTVF     D   G+ VA+K+     +   E  I
Sbjct: 7   KLRTIVSIGDPKKKYTRYEKIGQGASGTVFTA--IDVATGQEVAIKQINLQKQPKKELII 64

Query: 185 NEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           NE++++ ++ + N+V  L   L  +   +V E++  G
Sbjct: 65  NEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGG 101

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQ 192
           + E   D      ++G+G  G V+    L+    +A+K+        V+    E+ + S 
Sbjct: 2   EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSY 61

Query: 193 INHRNVVKLLGCCLE 207
           + HRN+V+ LG   E
Sbjct: 62  LKHRNIVQYLGSDSE 76

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|205157 pfam12947, EGF_3, EGF domain

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 12/23 (52%), Positives = 13/23 (56%)

Query: 35 KCKNTIGSYTCDCPIGMYGDGKV 57
           C NT GS+TC C  G  GDG  
Sbjct: 13 TCTNTGGSFTCTCKSGYTGDGVT 35

This family includes a variety of EGF-like domain homologues. This family includes the C-terminal domain of the malaria parasite MSP1 protein. Length = 36

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 5/84 (5%)

Query: 143 KVSRIIGQGGQGTVFKGML-TDGR---IVAVKKSKSVH-ESNVEQFINEVVILSQINHRN 197
           K+ ++IG G  G V  G L   G+    VA+K  K+ + E     F++E  I+ Q +H N
Sbjct: 7   KIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPN 66

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           ++ L G   +++  ++V E++ NG
Sbjct: 67  IIHLEGVVTKSKPVMIVTEYMENG 90

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 142 YKVSRIIGQGGQGTVFKGMLTD-GRIVAVKK-SKSVHESNVEQF-INEVVILSQINHRNV 198
           Y+   ++G+G  G V K    + G+IVA+KK  +S  +  V++  + E+ +L Q+ H N+
Sbjct: 3   YENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENL 62

Query: 199 VKLLGCCLETEVPLLVYEFI 218
           V L+      +   LV+EF+
Sbjct: 63  VNLIEVFRRKKRLYLVFEFV 82

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 8/76 (10%)

Query: 148 IGQGGQGTVFKGMLTDGRIVA------VKKSKSVHESNVEQFINEVVILSQINHRNVVKL 201
           IG G  G V  G    G   A      ++ S +  E     F+ EV    ++NH NV++ 
Sbjct: 3   IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQ--LLFLQEVQPYRELNHPNVLQC 60

Query: 202 LGCCLETEVPLLVYEF 217
           LG C+E+   LLV EF
Sbjct: 61  LGQCIESIPYLLVLEF 76

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 40.0 bits (93), Expect = 4e-04
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 11/95 (11%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKSKSVHESNVEQFINE 186
           E A +   +SR +GQG  G V++G+          T   I  V ++ S+ E    +F+NE
Sbjct: 2   EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRER--IEFLNE 59

Query: 187 VVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             ++ + N  +VV+LLG   + +  L++ E +  G
Sbjct: 60  ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 94

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 8/69 (11%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQF----INEVVILSQIN 194
           D Y+    IG+G  G V+K      G++VA+KK++   E + E      + E+ +L  ++
Sbjct: 1   DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRL--EMDEEGIPPTALREISLLQMLS 58

Query: 195 HRN-VVKLL 202
               +V+LL
Sbjct: 59  ESIYIVRLL 67

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 40.0 bits (93), Expect = 5e-04
 Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 6/77 (7%)

Query: 148 IGQGGQGTV-FKGMLTDGRIVAVKK----SKSVHESNVEQFINEVVILSQINHRNVVKLL 202
           IG G  G V F        +VAVKK     K  +E   +  I EV  L Q+ H N ++  
Sbjct: 29  IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNE-KWQDIIKEVKFLQQLKHPNTIEYK 87

Query: 203 GCCLETEVPLLVYEFIL 219
           GC L+     LV E+ L
Sbjct: 88  GCYLKEHTAWLVMEYCL 104

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|238010 cd00053, EGF, Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

 Score = 36.3 bits (84), Expect = 5e-04
 Identities = 13/22 (59%), Positives = 13/22 (59%)

Query: 34 GKCKNTIGSYTCDCPIGMYGDG 55
          G C NT GSY C CP G  GD 
Sbjct: 12 GTCVNTPGSYRCVCPPGYTGDR 33

Length = 36

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 39.8 bits (93), Expect = 5e-04
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 8/82 (9%)

Query: 148 IGQGGQGTVFKGMLTD----GRI----VAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
           +GQG    +FKG+  +    G +    V +K     H +  E F     ++SQ++H+++V
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
              G C+  +  ++V E++  G
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFG 84

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 40.1 bits (93), Expect = 5e-04
 Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 125 EKTKLFTSKDLEKATDNYKVSRIIGQGGQGTV-FKGMLTDGRIVAVKK-SKSVHESNV-- 180
           E  +LF  +D EK   +    R IG G  G V F   +    +VA+KK S S  +SN   
Sbjct: 13  EIAELFFKEDPEKLFTDL---REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKW 69

Query: 181 EQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL 219
           +  I EV  L +I H N ++  GC L      LV E+ L
Sbjct: 70  QDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL 108

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 40.0 bits (93), Expect = 5e-04
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)

Query: 144 VSRIIGQGGQGTVFKGM------LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
           + R +G+G  G VF           D  +VAVK  K    +  + F  E  +L+ + H +
Sbjct: 9   LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 68

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +VK  G C + +  ++V+E++ +G
Sbjct: 69  IVKFYGVCGDGDPLIMVFEYMKHG 92

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 39.8 bits (93), Expect = 5e-04
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 140 DNYKVSRIIGQGGQGTVFKGML-----TDGRI-VAVKKSKS-VHESNVEQFINEVVILSQ 192
           +N    + +G G  G V +        +D  + VAVK  K   H S  E  ++E+ I+S 
Sbjct: 35  NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSH 94

Query: 193 I-NHRNVVKLLGCCLETEVPLLVYEF 217
           + NH N+V LLG C      L++ E+
Sbjct: 95  LGNHENIVNLLGACTIGGPILVITEY 120

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 39.9 bits (93), Expect = 5e-04
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 164 GRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPLLVYEFI 218
           G +VAVK  K    + N   +  E+ IL  + H N+VK  GCC E   +   L+ E++
Sbjct: 33  GEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYV 90

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 8/83 (9%)

Query: 147 IIGQGGQGTVFKGML-----TDGRI-VAVKKSK-SVHESNVEQFINEVVILSQI-NHRNV 198
            +G+G  G V K         +    VAVK  K    E ++   ++E+ ++  I  H+N+
Sbjct: 19  PLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI 78

Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
           + LLG C +     +V E+  +G
Sbjct: 79  INLLGVCTQEGPLYVVVEYAAHG 101

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 39.3 bits (91), Expect = 9e-04
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 148 IGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
           IGQG  GTV+  M +  G+ VA+++     +   E  INE++++ +  + N+V  L   L
Sbjct: 28  IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87

Query: 207 ETEVPLLVYEFILNG 221
             +   +V E++  G
Sbjct: 88  VGDELWVVMEYLAGG 102

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)

Query: 148 IGQGGQGTVFKGMLTD-GRIVAVKKSK--SVHESNVEQFINEVVILSQINHRNVVKLLGC 204
           IG+G  GTVFK    +   IVA+K+ +     E      + E+ +L ++ H+N+V+L   
Sbjct: 8   IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDV 67

Query: 205 CLETEVPLLVYEF 217
               +   LV+E+
Sbjct: 68  LHSDKKLTLVFEY 80

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 38.9 bits (90), Expect = 0.001
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 148 IGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
           IGQG  GTV+  + +  G+ VA+K+     +   E  INE++++ +  + N+V  L   L
Sbjct: 27  IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 86

Query: 207 ETEVPLLVYEFILNG 221
             +   +V E++  G
Sbjct: 87  VGDELWVVMEYLAGG 101

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 8/74 (10%)

Query: 141 NYKVSRIIGQGGQGTVFK-GMLTDGRIVAVKKSK--SVHESNVEQFINEVVILSQINHRN 197
           ++KV + +G+G  G+V+K   L+D +  A+K+    S+ +   E  +NE+ IL+ +NH N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 198 VVK-----LLGCCL 206
           ++      L G  L
Sbjct: 61  IISYKEAFLDGNKL 74

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 1/79 (1%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLL 202
           ++ R +G G  G V++G+  +   VAVK  K     + + F+ E  I+ ++ H  +++L 
Sbjct: 9   QLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKP-GTMDPKDFLAEAQIMKKLRHPKLIQLY 67

Query: 203 GCCLETEVPLLVYEFILNG 221
             C   E   +V E +  G
Sbjct: 68  AVCTLEEPIYIVTELMKYG 86

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 146 RIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKL 201
           R +G G  G VF  + +D  + VAVKK       +V+  + E+ I+ +++H N+VK+
Sbjct: 11  RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKV 67

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|214544 smart00181, EGF, Epidermal growth factor-like domain

 Score = 35.2 bits (81), Expect = 0.001
 Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 3/33 (9%)

Query: 23 ECLDKEKYHCE-GKCKNTIGSYTCDCPIGMYGD 54
          EC       C  G C NT GSYTC CP G  GD
Sbjct: 1  ECASGG--PCSNGTCINTPGSYTCSCPPGYTGD 31

Length = 35

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 148 IGQGGQGTVFKGMLTD-GRIVAVK--KSKSVHESN-VEQFINEVVILSQINHRNVVKLL 202
           +GQGG G VF     D G IVA+K  K   + + N V   + E  IL+      +VKLL
Sbjct: 9   VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLL 67

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 10/82 (12%)

Query: 148 IGQGGQGTVFKGML-----TDGRIVAVKKSKSVHESNVEQ---FINEVVILSQINHRNVV 199
           +G+   G ++KG L        ++VA+K  K +  +N +Q   F  E  ++++++H N+V
Sbjct: 13  LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI--NNPQQWGEFQQEASLMAELHHPNIV 70

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
            LLG   + +   +++E++  G
Sbjct: 71  CLLGVVTQEQPVCMLFEYLNQG 92

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 142 YKVSRIIGQGGQGTVFKGML---TDGRIVAVKKSKS--VHESNVEQ-FINEVVILSQINH 195
           Y++   IG+G  G V+K       DG+  A+KK K      + + Q    E+ +L ++ H
Sbjct: 2   YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61

Query: 196 RNVVKLLGCCLE 207
            NVV L+   LE
Sbjct: 62  ENVVSLVEVFLE 73

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 135 LEKATDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQI 193
           L   T  +++  +IG+G  G V+K      G++VA+K    + +   E    E  IL + 
Sbjct: 1   LPDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEE-IKEEYNILRKY 59

Query: 194 -NHRNVVKLLGC 204
            NH N+    G 
Sbjct: 60  SNHPNIATFYGA 71

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 7/67 (10%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQF----INEVVILSQIN 194
           D Y+    I +G  G V++      G IVA+KK K   E   E F    + E+ IL ++ 
Sbjct: 5   DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLK--MEKEKEGFPITSLREINILLKLQ 62

Query: 195 HRNVVKL 201
           H N+V +
Sbjct: 63  HPNIVTV 69

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)

Query: 143 KVSRIIGQGGQGTVFKGMLT-DGR---IVAVKKSK-SVHESNVEQFINEVVILSQINHRN 197
           K+ RI+G G  G + +G L    +    VA+   +    +     F+ E + L Q +H N
Sbjct: 8   KIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSN 67

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +V+L G        ++V E++ NG
Sbjct: 68  IVRLEGVITRGNTMMIVTEYMSNG 91

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)

Query: 141 NYKVSRIIGQGGQGTVFKGMLTDGRIV-AVK---KSKSVHESNVEQFINEVVILSQINHR 196
           ++++ R+IG+G  G V      D + + A+K   K K V + +V   +NE  IL ++NH 
Sbjct: 1   HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP 60

Query: 197 NVVKL 201
            +V L
Sbjct: 61  FLVNL 65

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGMLTD------GRIVAVKKSK-SVHESNVEQFINEVV 188
           E   D  K+ + +G+G  G V +            R VAVK  K     S  +  + E+ 
Sbjct: 3   EFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELK 62

Query: 189 ILSQI-NHRNVVKLLGCCLETEVPLLV 214
           IL  I +H NVV LLG C +   PL+V
Sbjct: 63  ILIHIGHHLNVVNLLGACTKPGGPLMV 89

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 3/84 (3%)

Query: 141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKS--KSVHESNVEQFINEVVILSQINHRN 197
           ++++   IG+G  G VFK +   D R+ A+K+     ++    E+ I+E  +L++++   
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +++     L+     +V E+  NG
Sbjct: 61  IIRYYESFLDKGKLNIVMEYAENG 84

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSK-SVHESNVEQFINEVVILSQINHRNV 198
           N+K    +G+G   TV+KG   T G IVA+K+      E      I E+ ++ ++ H N+
Sbjct: 1   NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI 60

Query: 199 VKLLGCCLETEVPL-LVYEFI 218
           V+L    + TE  L LV+E++
Sbjct: 61  VRLHD-VIHTENKLMLVFEYM 80

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 37.3 bits (86), Expect = 0.003
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 7/83 (8%)

Query: 137 KATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNV-----EQFINEVVIL 190
           K T+  KV +++G G  GTV+KG+ + DG  V +  +  V   N      ++ ++E  ++
Sbjct: 5   KETELKKV-KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 63

Query: 191 SQINHRNVVKLLGCCLETEVPLL 213
           + +    V +LLG CL + V L+
Sbjct: 64  AGVGSPYVCRLLGICLTSTVQLV 86

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEVVILSQINH---R 196
           Y+   +IG+G  G V++G  +  GR+VA+K  +    + +V     EV +LSQ+      
Sbjct: 3   YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPP 62

Query: 197 NVVKLLGCCL 206
           N+ K  G  L
Sbjct: 63  NITKYYGSYL 72

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 11/95 (11%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGMLTD---GRI---VAVK---KSKSVHESNVEQFINE 186
           E + +   + R +GQG  G V++G   D   G     VAVK   +S S+ E    +F+NE
Sbjct: 2   EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER--IEFLNE 59

Query: 187 VVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             ++      +VV+LLG   + +  L+V E + +G
Sbjct: 60  ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 94

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 148 IGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLG 203
           +G G  G V+K    + G + A K  ++  E  +E ++ E+ IL+  NH  +VKLLG
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLG 76

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
           G +VAVKK +     ++  F  E+ IL  + H N+VK  G C
Sbjct: 33  GEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVC 74

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 6/74 (8%)

Query: 148 IGQGGQGTVFKG---MLTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINHRNVVKLL 202
           +G G  GTV KG   M    + VAVK  K+ +   +  ++ + E  ++ Q+++  +V+++
Sbjct: 3   LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62

Query: 203 GCCLETEVPLLVYE 216
           G C E E  +LV E
Sbjct: 63  GIC-EAESWMLVME 75

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 8/87 (9%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKS-VHESNVEQFINEVV 188
           E   D  ++ +++G G  G V +         +    VAVK  K     S  +  ++E+ 
Sbjct: 3   EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELK 62

Query: 189 ILSQI-NHRNVVKLLGCCLETEVPLLV 214
           IL  I NH NVV LLG C +   PL+V
Sbjct: 63  ILIHIGNHLNVVNLLGACTKPNGPLMV 89

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 36.8 bits (85), Expect = 0.004
 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)

Query: 166 IVAVKKSKSVHESNVEQ-FINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           +VAVK  +     N    F+ EV ILS++   N+++LLG C++ +   ++ E++ NG
Sbjct: 48  LVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENG 104

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	221
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.82
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.81
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.81
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.79
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.79
KOG3653	534	consensus Transforming growth factor beta/activin	99.74
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.74
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.73
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.71
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.68
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.68
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.66
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.64
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.57
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.54
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.53
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.51
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.48
KOG0605	550	consensus NDR and related serine/threonine kinases	99.47
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.46
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.46
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.45
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.43
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.43
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.43
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.42
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.42
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.41
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.4
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.4
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.37
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.36
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.36
PHA02988	283	hypothetical protein; Provisional	99.36
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.36
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.36
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.35
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.35
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.35
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.35
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.34
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.34
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.34
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.34
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.33
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.33
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.33
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.33
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.33
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.33
KOG0586	596	consensus Serine/threonine protein kinase [General	99.32
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.32
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.32
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.32
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.31
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.31
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.31
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.31
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.31
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.31
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.3
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.3
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.29
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.29
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.29
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.29
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.29
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.28
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.28
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.28
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.28
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.28
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.28
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.28
KOG0198	313	consensus MEKK and related serine/threonine protei	99.27
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.27
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.27
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.27
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.27
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.27
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.27
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.27
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.26
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.26
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.26
KOG0578	550	consensus p21-activated serine/threonine protein k	99.26
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.26
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.25
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.25
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.25
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.25
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.25
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.25
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.25
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.25
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.25
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.25
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.25
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.24
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.24
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.24
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.24
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.24
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.24
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.24
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.23
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.23
PTZ00267	478	NIMA-related protein kinase; Provisional	99.23
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.23
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.23
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.23
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.23
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.22
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.22
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.22
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.22
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.22
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.22
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.22
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.22
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.22
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.21
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.21
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.21
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.21
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.21
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.21
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.21
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.21
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.21
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.2
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.2
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.2
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.2
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.2
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.2
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.19
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.19
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.19
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.19
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.19
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.19
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.19
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.19
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.19
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.19
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.19
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.19
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.18
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.18
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.18
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.18
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.18
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.18
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.18
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.18
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.18
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.17
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.17
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.17
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.17
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.17
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.17
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.17
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.17
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.17
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.17
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.17
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.17
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.17
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.17
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.16
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.16
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.16
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.16
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.15
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.15
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.15
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.15
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.15
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.15
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.14
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.14
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.14
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.14
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.14
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.14
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.14
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.14
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.14
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.14
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.14
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.14
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.14
PLN00009	294	cyclin-dependent kinase A; Provisional	99.13
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.13
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.13
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.13
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.13
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.13
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.13
PRK09188	365	serine/threonine protein kinase; Provisional	99.13
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.13
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.13
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.13
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.13
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.13
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.13
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.12
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.12
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.12
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.12
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.12
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.12
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.12
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.11
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.11
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.11
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.11
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.11
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.11
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.11
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.11
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.11
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.1
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.1
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.1
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.1
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.1
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.1
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.1
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.1
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.1
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.1
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.09
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.09
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.09
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.09
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.09
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.09
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.09
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.09
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.09
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.09
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.08
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.08
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.08
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.08
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.08
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.08
PHA03212	391	serine/threonine kinase US3; Provisional	99.08
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.07
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.07
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.07
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.06
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.06
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.06
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.06
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.06
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.06
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.06
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.06
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.05
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.05
KOG0610	459	consensus Putative serine/threonine protein kinase	99.05
PTZ00283	496	serine/threonine protein kinase; Provisional	99.05
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.05
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.05
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.05
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.05
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.05
PTZ00036	440	glycogen synthase kinase; Provisional	99.05
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.05
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.04
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.04
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.03
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.03
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.03
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.03
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.03
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.02
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.02
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.02
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.02
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.02
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.02
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.01
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.01
KOG0589	426	consensus Serine/threonine protein kinase [General	99.01
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.01
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.01
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.01
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.99
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.99
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.99
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.98
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.98
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.98
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.98
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.97
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.97
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.97
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.97
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.97
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.97
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.97
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.96
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.96
PHA03211	461	serine/threonine kinase US3; Provisional	98.96
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.96
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.96
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.95
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.95
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.95
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.95
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.94
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.94
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.94
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.93
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.93
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.93
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.92
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.91
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.91
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.91
PHA03209	357	serine/threonine kinase US3; Provisional	98.9
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.9
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.9
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.88
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.88
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.88
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.88
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.87
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.86
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.86
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.85
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.85
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.85
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.85
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.85
PHA03207	392	serine/threonine kinase US3; Provisional	98.84
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.84
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.83
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.83
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.81
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.81
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.8
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.79
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.78
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.78
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.76
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.76
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.75
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.75
KOG0607	463	consensus MAP kinase-interacting kinase and relate	98.74
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.74
PRK10345	210	hypothetical protein; Provisional	98.74
PHA03210	501	serine/threonine kinase US3; Provisional	98.71
KOG0584	632	consensus Serine/threonine protein kinase [General	98.71
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.71
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.71
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.69
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.68
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.68
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.68
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.68
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.65
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.65
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.62
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.61
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.61
PRK14879	211	serine/threonine protein kinase; Provisional	98.6
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.58
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.58
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.57
KOG0596	677	consensus Dual specificity; serine/threonine and t	98.57
PTZ00284	467	protein kinase; Provisional	98.57
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.51
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.46
KOG1152	772	consensus Signal transduction serine/threonine kin	98.4
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.4
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.33
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.29
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.29
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	98.24
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.24
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.23
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	98.16
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.14
smart00090	237	RIO RIO-like kinase.	98.11
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.11
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.09
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.05
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	98.05
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.04
KOG0696	683	consensus Serine/threonine protein kinase [Signal	98.04
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	98.04
PHA02882	294	putative serine/threonine kinase; Provisional	98.04
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.03
KOG1219	4289	consensus Uncharacterized conserved protein, conta	97.98
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.96
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.92
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	97.88
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	97.84
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	97.81
KOG4260	350	consensus Uncharacterized conserved protein [Funct	97.74
PRK12274	218	serine/threonine protein kinase; Provisional	97.73
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.68
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.65
KOG1214	1289	consensus Nidogen and related basement membrane pr	97.61
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.6
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	97.51
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	97.49
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	97.45
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.41
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	97.38
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	97.28
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.24
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	97.23
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.16
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	97.1
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.08
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.05
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.03
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	96.9
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	96.75
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.72
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	96.34
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.3
PF12191	129	stn_TNFRSF12A: Tumour necrosis factor receptor stn	96.23
KOG1219	4289	consensus Uncharacterized conserved protein, conta	96.2
PF12662	24	cEGF: Complement Clr-like EGF-like	96.08
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	96.03
COG0661	517	AarF Predicted unusual protein kinase [General fun	95.86
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	95.83
cd00053	36	EGF Epidermal growth factor domain, found in epide	95.53
KOG1243	690	consensus Protein kinase [General function predict	95.53
KOG1214	1289	consensus Nidogen and related basement membrane pr	95.45
KOG4258	1025	consensus Insulin/growth factor receptor (contains	95.32
smart00181	35	EGF Epidermal growth factor-like domain.	94.94
PLN02876	822	acyl-CoA dehydrogenase	94.89
KOG4289	2531	consensus Cadherin EGF LAG seven-pass G-type recep	94.87
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	94.55
PRK10593	297	hypothetical protein; Provisional	94.28
PF02009	299	Rifin_STEVOR: Rifin/stevor family; InterPro: IPR00	94.26
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	93.75
KOG1235	538	consensus Predicted unusual protein kinase [Genera	93.63
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	93.56
PRK09550	401	mtnK methylthioribose kinase; Reviewed	93.34
COG0478	304	RIO-like serine/threonine protein kinase fused to	92.88
PTZ00046	358	rifin; Provisional	92.65
TIGR01477	353	RIFIN variant surface antigen, rifin family. This	92.53
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	92.42
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	92.37
PF12955	103	DUF3844: Domain of unknown function (DUF3844); Int	92.31
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	92.14
PF01636	239	APH: Phosphotransferase enzyme family This family	91.97
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	91.92
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	91.56
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	91.5
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	91.43
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	91.34
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	91.22
KOG3087	229	consensus Serine/threonine protein kinase [General	91.06
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	90.99
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	90.88
PF03302	397	VSP: Giardia variant-specific surface protein; Int	90.16
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	90.15
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	89.08
PF09064	34	Tme5_EGF_like: Thrombomodulin like fifth domain, E	88.11
PF08114	43	PMP1_2: ATPase proteolipid family; InterPro: IPR01	87.63
KOG1226	783	consensus Integrin beta subunit (N-terminal portio	87.35
PF15102	146	TMEM154: TMEM154 protein family	87.25
PHA02887	126	EGF-like protein; Provisional	87.04
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	86.52
PF08114	43	PMP1_2: ATPase proteolipid family; InterPro: IPR01	85.88
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	85.72
PF08374	221	Protocadherin: Protocadherin; InterPro: IPR013585	84.29
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	83.96
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	82.82
KOG4260	350	consensus Uncharacterized conserved protein [Funct	82.41
KOG1217	487	consensus Fibrillins and related proteins containi	82.11
KOG0590	601	consensus Checkpoint kinase and related serine/thr	82.0
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	80.6
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	80.56
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	80.55

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=7.3e-20  Score=144.72  Aligned_cols=96  Identities=50%  Similarity=0.825  Sum_probs=86.7

Q ss_pred             ceeeechhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEE
Q 036177          126 KTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC  205 (221)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~  205 (221)
                      ....|+++++..++++|...+.||+|+||.||+|.+.++..||||++.....+...+|.+|+.+|.+++|||+|+|+|+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            56679999999999999999999999999999999988899999988764433145699999999999999999999999


Q ss_pred             EeCC-eeEEEEEcccCC
Q 036177          206 LETE-VPLLVYEFILNG  221 (221)
Q Consensus       206 ~~~~-~~~lv~e~~~~G  221 (221)
                      ...+ ..+||||||++|
T Consensus       141 ~e~~~~~~LVYEym~nG  157 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNG  157 (361)
T ss_pred             ecCCceEEEEEEccCCC
Confidence            9988 599999999998

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.81  E-value=2.1e-20  Score=153.73  Aligned_cols=86  Identities=29%  Similarity=0.514  Sum_probs=77.1

Q ss_pred             hhhccCccccceecccCceEEEEEEeC----CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLT----DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~----~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ++....+++.++||.|.||.|++|.++    +...||||.++. .++..+.+|+.|+.+|.+++||||++|.|+.+.+.+
T Consensus       625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~P  704 (996)
T KOG0196|consen  625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKP  704 (996)
T ss_pred             hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCce
Confidence            455567889999999999999999963    245799999997 566778899999999999999999999999999999


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+||+|||+||
T Consensus       705 vMIiTEyMENG  715 (996)
T KOG0196|consen  705 VMIITEYMENG  715 (996)
T ss_pred             eEEEhhhhhCC
Confidence            99999999998

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.81  E-value=2.8e-20  Score=154.41  Aligned_cols=90  Identities=32%  Similarity=0.516  Sum_probs=79.3

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEeC------CCcEEEEEeccCCCc-ccHHHHHHHHHHHHcCCCCceeeeeeE
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSVHE-SNVEQFINEVVILSQINHRNVVKLLGC  204 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~  204 (221)
                      ....++++.++...+.||+|+||+||+|...      +...||||.++.... +...+|.+|+++|+.|+|||||+|+|+
T Consensus       478 ~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGV  557 (774)
T KOG1026|consen  478 LKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGV  557 (774)
T ss_pred             cceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEE
Confidence            3455778888999999999999999999852      245799999998444 478899999999999999999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      |...++.+||+|||.+|
T Consensus       558 C~~~~P~~MvFEYm~~G  574 (774)
T KOG1026|consen  558 CREGDPLCMVFEYMDHG  574 (774)
T ss_pred             EccCCeeEEEEEecccc
Confidence            99999999999999987

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.79  E-value=1.1e-19  Score=150.45  Aligned_cols=77  Identities=27%  Similarity=0.550  Sum_probs=66.2

Q ss_pred             ccceecccCceEEEEEEe-CCC----cEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          144 VSRIIGQGGQGTVFKGML-TDG----RIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       144 ~~~~lg~G~fg~v~~~~~-~~~----~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ..++||+|+||+||+|.| +.+    .+||+|.+.. ...+...+|+.|+-.|++++|||+++|+|+|..+. +.||++|
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~  778 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL  778 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence            367999999999999985 444    4689999876 44455788999999999999999999999998776 7899999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      ||.|
T Consensus       779 mP~G  782 (1177)
T KOG1025|consen  779 MPLG  782 (1177)
T ss_pred             cccc
Confidence            9987

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.79  E-value=5.8e-19  Score=141.44  Aligned_cols=86  Identities=29%  Similarity=0.493  Sum_probs=78.4

Q ss_pred             hhhccCccccceecccCceEEEEEEeCCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      +.+++.+.+.+.||+|.||.|..+....+..||||.+++ .....+.+|.+|+++|.+++||||++|+|+|..++++.+|
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI  613 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMI  613 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHH
Confidence            567778888999999999999999986779999999998 4444568999999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      +|||++|
T Consensus       614 ~EYmEnG  620 (807)
T KOG1094|consen  614 TEYMENG  620 (807)
T ss_pred             HHHHhcC
Confidence            9999997

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.74  E-value=1.3e-17  Score=130.69  Aligned_cols=78  Identities=35%  Similarity=0.501  Sum_probs=65.8

Q ss_pred             cCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHH--cCCCCceeeeeeEEEeCC----eeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILS--QINHRNVVKLLGCCLETE----VPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~--~l~h~niv~l~g~~~~~~----~~~l  213 (221)
                      ..+.+..++|+|+||.||+|.+ +++.||||++..   ++.+.|++|-.+.+  .++|+||++|+++.....    +.+|
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL  285 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL  285 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc-cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence            3456688999999999999999 679999999854   55677999988877  458999999999876544    7899


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      |+||.++|
T Consensus       286 Vt~fh~kG  293 (534)
T KOG3653|consen  286 VTEFHPKG  293 (534)
T ss_pred             EeeeccCC
Confidence            99999987

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.74  E-value=3.1e-18  Score=135.79  Aligned_cols=89  Identities=31%  Similarity=0.488  Sum_probs=80.6

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      .+.|+++++.+.+.+.||+|.||.||.|.|.....||+|.++..... .++|++|+.+|++|+|+|||+|+|+|...+++
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~-~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~pi  276 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS-PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPI  276 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC-hhHHHHHHHHHHhCcccCeEEEEEEEecCCce
Confidence            57788888889999999999999999999966669999999875433 46799999999999999999999999999999


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      +||||||++|
T Consensus       277 yIVtE~m~~G  286 (468)
T KOG0197|consen  277 YIVTEYMPKG  286 (468)
T ss_pred             EEEEEecccC
Confidence            9999999988

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.73  E-value=4e-18  Score=146.23  Aligned_cols=86  Identities=36%  Similarity=0.723  Sum_probs=76.6

Q ss_pred             hhhccCccccceecccCceEEEEEEeCC--C----cEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTD--G----RIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~--~----~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      +.++.++++.+.||+|+||.||+|.+.+  +    ..||+|.++. .+.++..+|++|+.+|++++|||||+++|++...
T Consensus       688 ~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~  767 (1025)
T KOG1095|consen  688 EVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS  767 (1025)
T ss_pred             cCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence            3567788999999999999999999643  3    2489999976 6677788999999999999999999999999999


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      .+++|++|||++|
T Consensus       768 ~~~~i~leyM~gG  780 (1025)
T KOG1095|consen  768 GPPLILLEYMEGG  780 (1025)
T ss_pred             CCcEEEehhcccC
Confidence            9999999999988

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.71  E-value=2.6e-17  Score=132.06  Aligned_cols=92  Identities=32%  Similarity=0.572  Sum_probs=80.2

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEeCC--C--cE-EEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeee
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD--G--RI-VAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKL  201 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~--~--~~-vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l  201 (221)
                      .....|+...+++.+.+.||+|+||.||+|.+..  +  .. ||+|..+.   .......+|++|+++|++++|||||+|
T Consensus       147 I~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~  226 (474)
T KOG0194|consen  147 IPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRF  226 (474)
T ss_pred             ccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            4456788888999999999999999999998633  2  23 89998874   445667899999999999999999999


Q ss_pred             eeEEEeCCeeEEEEEcccCC
Q 036177          202 LGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       202 ~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +|+.....|++||||++++|
T Consensus       227 yGVa~~~~Pl~ivmEl~~gG  246 (474)
T KOG0194|consen  227 YGVAVLEEPLMLVMELCNGG  246 (474)
T ss_pred             EEEEcCCCccEEEEEecCCC
Confidence            99999999999999999998

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.68  E-value=1.8e-16  Score=122.27  Aligned_cols=83  Identities=34%  Similarity=0.571  Sum_probs=72.9

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ..+|.+.+.||+|+|++||+|.. .++..||||.+...  .....+.+..|+.+|++++|||||+|+.+...++..+|||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            35677778899999999999994 56789999987653  5566777999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+.+|
T Consensus        89 EyC~gG   94 (429)
T KOG0595|consen   89 EYCNGG   94 (429)
T ss_pred             EeCCCC
Confidence            999987

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.68  E-value=1.3e-16  Score=125.66  Aligned_cols=86  Identities=30%  Similarity=0.524  Sum_probs=72.0

Q ss_pred             hhhhccCccccceecccCceEEEEEEeCCCcE-EEEEeccCCC--cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC-e
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGMLTDGRI-VAVKKSKSVH--ESNVEQFINEVVILSQINHRNVVKLLGCCLETE-V  210 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~-vavk~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-~  210 (221)
                      +.+....+...+.+|+|+||+||+|.| .|.. ||+|.+....  ....++|.+|+.+|.+++|||||.|+|++.... .
T Consensus        36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~-~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~  114 (362)
T KOG0192|consen   36 EEIDPDELPIEEVLGSGSFGTVYKGKW-RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGS  114 (362)
T ss_pred             eecChHHhhhhhhcccCCceeEEEEEe-CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            444445556677799999999999999 5665 9999987632  222668999999999999999999999999987 7


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      ..||||||++|
T Consensus       115 ~~iVtEy~~~G  125 (362)
T KOG0192|consen  115 LCIVTEYMPGG  125 (362)
T ss_pred             eEEEEEeCCCC
Confidence            89999999998

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=5.4e-17  Score=126.38  Aligned_cols=80  Identities=25%  Similarity=0.380  Sum_probs=68.8

Q ss_pred             hccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC--CCCceeeeeeEEEeCC----ee
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI--NHRNVVKLLGCCLETE----VP  211 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~g~~~~~~----~~  211 (221)
                      ...++.+.+.||+|.||.||+|.| .|..||||++...+   .+.|.+|.++....  +|+||+.|++....++    ++
T Consensus       209 iarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL  284 (513)
T KOG2052|consen  209 IARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL  284 (513)
T ss_pred             hhheeEEEEEecCccccceeeccc-cCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence            446788899999999999999999 89999999986533   45689999998864  9999999999876643    78


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      |||++|.++|
T Consensus       285 wLvTdYHe~G  294 (513)
T KOG2052|consen  285 WLVTDYHEHG  294 (513)
T ss_pred             EEeeecccCC
Confidence            9999999987

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.64  E-value=1.2e-16  Score=129.53  Aligned_cols=89  Identities=29%  Similarity=0.527  Sum_probs=81.3

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEeCC-CcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~-~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      .+.|+..+.++...++||-|.||.||.|.|+. ...||||.++... -..++|+.|+.+|+.++|||+|+|+|+|+...+
T Consensus       259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP  337 (1157)
T KOG4278|consen  259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP  337 (1157)
T ss_pred             cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence            47899999999999999999999999999854 6789999998744 357899999999999999999999999999999


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .|||+|||.+|
T Consensus       338 FYIiTEfM~yG  348 (1157)
T KOG4278|consen  338 FYIITEFMCYG  348 (1157)
T ss_pred             eEEEEecccCc
Confidence            99999999987

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.57  E-value=4.8e-15  Score=117.23  Aligned_cols=81  Identities=32%  Similarity=0.493  Sum_probs=70.2

Q ss_pred             cCccccceecccCceEEEEEE-eCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--CeeEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPLLV  214 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv  214 (221)
                      +.|...+.||+|.||.||++. ..+|..||+|+++-  ..+....-..||+.+|++|+||||++|.++.+..  ..+|||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            557778899999999999998 67899999998864  3445556678999999999999999999998876  689999


Q ss_pred             EEcccC
Q 036177          215 YEFILN  220 (221)
Q Consensus       215 ~e~~~~  220 (221)
                      +|||++
T Consensus       197 FeYMdh  202 (560)
T KOG0600|consen  197 FEYMDH  202 (560)
T ss_pred             Eecccc
Confidence            999985

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.54  E-value=2.8e-14  Score=110.52  Aligned_cols=82  Identities=26%  Similarity=0.435  Sum_probs=68.7

Q ss_pred             cCccccceecccCceEEEEEE-eCCCcEEEEEeccC--CCc-----ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS--VHE-----SNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~--~~~-----~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      +.+.+.+.||+|+||.|-.+. .++|+.||||+++.  ...     .......+|+++|++|+|||||++.+.+...+..
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            446678999999999999998 56799999998754  111     1122357999999999999999999999999999


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      |||||||.+|
T Consensus       252 YmVlE~v~GG  261 (475)
T KOG0615|consen  252 YMVLEYVEGG  261 (475)
T ss_pred             EEEEEEecCc
Confidence            9999999988

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.53  E-value=1.2e-14  Score=118.05  Aligned_cols=87  Identities=34%  Similarity=0.633  Sum_probs=73.8

Q ss_pred             hhhhhccCccccceecccCceEEEEEEeCC---C--cEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe
Q 036177          134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTD---G--RIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLE  207 (221)
Q Consensus       134 ~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~---~--~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  207 (221)
                      ..++.++.+.+.+.||+|.||.||+|.+.+   |  ..||||..+. .+..+.+.|+.|+.+|++++||||++|+|+|..
T Consensus       383 nyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e  462 (974)
T KOG4257|consen  383 NYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE  462 (974)
T ss_pred             cceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence            345566778889999999999999999743   2  3589999876 666778899999999999999999999999965


Q ss_pred             CCeeEEEEEcccCC
Q 036177          208 TEVPLLVYEFILNG  221 (221)
Q Consensus       208 ~~~~~lv~e~~~~G  221 (221)
                      . +.|||||+++.|
T Consensus       463 ~-P~WivmEL~~~G  475 (974)
T KOG4257|consen  463 Q-PMWIVMELAPLG  475 (974)
T ss_pred             c-ceeEEEecccch
Confidence            4 689999999876

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.51  E-value=2.5e-13  Score=121.17  Aligned_cols=78  Identities=27%  Similarity=0.477  Sum_probs=65.4

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      ..+...+.||+|+||.||+|.. .++..||+|.++.....    ...|++.|++++|||||+++|++...+..++||||+
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~  765 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI  765 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence            3456678899999999999985 57889999988653322    235688899999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus       766 ~~g  768 (968)
T PLN00113        766 EGK  768 (968)
T ss_pred             CCC
Confidence            986

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.48  E-value=1.6e-13  Score=110.83  Aligned_cols=89  Identities=29%  Similarity=0.484  Sum_probs=75.3

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeC------CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCC-CCceeeeeeE
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKS-VHESNVEQFINEVVILSQIN-HRNVVKLLGC  204 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~  204 (221)
                      ..++.+.+.|.+.+.||+|+||.||+|...      .+..||+|.++. ......+.|++|+.+|+++. ||||++++|+
T Consensus        30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~  109 (400)
T cd05105          30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGA  109 (400)
T ss_pred             CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEE
Confidence            456778888999999999999999999842      134699999875 33344567999999999995 9999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +...+..+|||||+++|
T Consensus       110 ~~~~~~~~lv~Ey~~~g  126 (400)
T cd05105         110 CTKSGPIYIITEYCFYG  126 (400)
T ss_pred             EccCCceEEEEEecCCC
Confidence            99989999999999886

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.47  E-value=1.6e-13  Score=109.45  Aligned_cols=86  Identities=28%  Similarity=0.410  Sum_probs=75.5

Q ss_pred             hhhccCccccceecccCceEEEEEE-eCCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      ....++|.+++.||+|+||.||.++ ...|..+|+|+++.   ....+.+-.+.|-.+|...++|+||+|+-.+.+.+.+
T Consensus       137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L  216 (550)
T KOG0605|consen  137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL  216 (550)
T ss_pred             cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence            4455789999999999999999998 45689999999976   3344566788999999999999999999999999999


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ||||||+|+|
T Consensus       217 YLiMEylPGG  226 (550)
T KOG0605|consen  217 YLIMEYLPGG  226 (550)
T ss_pred             EEEEEecCCc
Confidence            9999999998

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.46  E-value=9.9e-14  Score=101.87  Aligned_cols=79  Identities=27%  Similarity=0.454  Sum_probs=68.2

Q ss_pred             CccccceecccCceEEEEEE-eCCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      .|...+.+|+|.||.||+|. ...|+.||||+++..  ...-....+||++.|+.++|+||+.|+.++...+.+.||+||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            35557889999999999998 567999999998753  333345689999999999999999999999999999999999


Q ss_pred             cc
Q 036177          218 IL  219 (221)
Q Consensus       218 ~~  219 (221)
                      |+
T Consensus        83 m~   84 (318)
T KOG0659|consen   83 MP   84 (318)
T ss_pred             cc
Confidence            97

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.46  E-value=1.9e-13  Score=109.62  Aligned_cols=89  Identities=29%  Similarity=0.463  Sum_probs=74.8

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEe------CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeeeeE
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGC  204 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~------~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~  204 (221)
                      ..+..+.++|.+.+.||+|+||.||++.+      ..+..||+|.++. ......+.+.+|+.+|..+ +||||++++|.
T Consensus        28 ~~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~  107 (375)
T cd05104          28 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGA  107 (375)
T ss_pred             cccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeee
Confidence            34566777899999999999999999963      2355799999875 3334456799999999999 89999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +...+..++||||+++|
T Consensus       108 ~~~~~~~~lv~E~~~~g  124 (375)
T cd05104         108 CTVGGPTLVITEYCCYG  124 (375)
T ss_pred             eccCCcceeeehhccCC
Confidence            99999999999999886

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.45  E-value=4.8e-13  Score=108.17  Aligned_cols=82  Identities=26%  Similarity=0.438  Sum_probs=73.7

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ..|...++||+|+|+.+|.+.. ..|..+|+|++..   ......+...+|+++.+.|+|||||.|++.+.+.+..|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4577899999999999999995 7899999998854   34556778999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      |++++|
T Consensus        98 ELC~~~  103 (592)
T KOG0575|consen   98 ELCHRG  103 (592)
T ss_pred             EecCCc
Confidence            999886

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.43  E-value=6.1e-13  Score=101.74  Aligned_cols=83  Identities=28%  Similarity=0.502  Sum_probs=70.4

Q ss_pred             ccCccccceecccCceEEEEEEeC----CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT----DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~----~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      .++|++.+.||+|+||.||+|.+.    .+..||+|.++.. +......|.+|+.++.+++||||++++|.+...+..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            356778899999999999999752    3568999998763 33445679999999999999999999999999899999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ||||+++|
T Consensus        84 v~e~~~~~   91 (266)
T cd05064          84 VTEYMSNG   91 (266)
T ss_pred             EEEeCCCC
Confidence            99999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.43  E-value=5.5e-13  Score=107.70  Aligned_cols=89  Identities=30%  Similarity=0.465  Sum_probs=75.1

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeC------CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCC-CCceeeeeeE
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSV-HESNVEQFINEVVILSQIN-HRNVVKLLGC  204 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~l~g~  204 (221)
                      .+|+.+.+++.+.+.||+|+||.||++.+.      .+..||+|.++.. .......+++|+.+|.++. ||||++++|.
T Consensus        30 ~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~  109 (401)
T cd05107          30 SAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGA  109 (401)
T ss_pred             CcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence            457778888999999999999999999853      2357999999753 2333457999999999996 9999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +...+..++|+||+++|
T Consensus       110 ~~~~~~~~iv~E~~~~g  126 (401)
T cd05107         110 CTKGGPIYIITEYCRYG  126 (401)
T ss_pred             EccCCCcEEEEeccCCC
Confidence            99988999999999876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.43  E-value=8.1e-14  Score=114.54  Aligned_cols=85  Identities=25%  Similarity=0.455  Sum_probs=72.7

Q ss_pred             hhhccCccccceecccCceEEEEEEeCC--C--cEEEEEeccCCCcc-cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTD--G--RIVAVKKSKSVHES-NVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~--~--~~vavk~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      .++.+.+.+.++||+|.||.|++|.|..  |  ..||||.++..... ...+|++|+.+|-+|+|||+++|+|+... .+
T Consensus       106 lIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp  184 (1039)
T KOG0199|consen  106 LIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QP  184 (1039)
T ss_pred             eccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-ch
Confidence            3455677889999999999999999743  3  35899999875544 66889999999999999999999999988 77


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+||+|+++.|
T Consensus       185 ~mMV~ELaplG  195 (1039)
T KOG0199|consen  185 AMMVFELAPLG  195 (1039)
T ss_pred             hhHHhhhcccc
Confidence            89999999876

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.42  E-value=1.2e-12  Score=102.01  Aligned_cols=84  Identities=26%  Similarity=0.491  Sum_probs=69.9

Q ss_pred             hccCccccceecccCceEEEEEEeCC-----------------CcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCcee
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLTD-----------------GRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVV  199 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~~-----------------~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv  199 (221)
                      +.++|.+.+.||+|+||.||++.+.+                 +..||+|.++.. .......|.+|+.+|.+++||||+
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv   82 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNII   82 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCee
Confidence            34567778899999999999997532                 336999988763 333456799999999999999999


Q ss_pred             eeeeEEEeCCeeEEEEEcccCC
Q 036177          200 KLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       200 ~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ++++.+...+..+++|||+++|
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~  104 (304)
T cd05096          83 RLLGVCVDEDPLCMITEYMENG  104 (304)
T ss_pred             EEEEEEecCCceEEEEecCCCC
Confidence            9999999988999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.42  E-value=4.2e-13  Score=106.18  Aligned_cols=87  Identities=32%  Similarity=0.502  Sum_probs=71.3

Q ss_pred             hhhhccCccccceecccCceEEEEEEe------CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeeeeeEEE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKLLGCCL  206 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~------~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~  206 (221)
                      |.++.++|.+.+.||+|+||.||++..      ..+..||+|.++.. .......+++|+.+|..+ +||||++++|++.
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (338)
T cd05102           2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT   81 (338)
T ss_pred             cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence            456778889999999999999999973      22467999998753 333456799999999999 8999999999887


Q ss_pred             eC-CeeEEEEEcccCC
Q 036177          207 ET-EVPLLVYEFILNG  221 (221)
Q Consensus       207 ~~-~~~~lv~e~~~~G  221 (221)
                      .. ...+++|||+++|
T Consensus        82 ~~~~~~~lv~ey~~~g   97 (338)
T cd05102          82 KPNGPLMVIVEFCKYG   97 (338)
T ss_pred             CCCCceEEEEecCCCC
Confidence            64 4678999999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.41  E-value=9.6e-14  Score=100.47  Aligned_cols=82  Identities=26%  Similarity=0.417  Sum_probs=70.0

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|.||.||.+.. +++-.||+|++..   ...+-...+.+|+++-+.|+||||++++|++.+....||++
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            5577789999999999999985 4567899998743   23333467999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||.++|
T Consensus       102 Eya~~g  107 (281)
T KOG0580|consen  102 EYAPRG  107 (281)
T ss_pred             EecCCc
Confidence            999887

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.40  E-value=7.5e-13  Score=100.93  Aligned_cols=79  Identities=39%  Similarity=0.650  Sum_probs=65.1

Q ss_pred             cccceecccCceEEEEEEeC-----CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          143 KVSRIIGQGGQGTVFKGMLT-----DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~~-----~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++.+.||+|.||.||+|.+.     .+..|+||.++. ......+.|.+|+..|++++||||++++|++...++.++|+|
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            34678999999999999975     256799999966 344457889999999999999999999999998888999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~~g   86 (259)
T PF07714_consen   82 YCPGG   86 (259)
T ss_dssp             --TTE
T ss_pred             ccccc
Confidence            99875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.40  E-value=1.5e-13  Score=102.87  Aligned_cols=79  Identities=28%  Similarity=0.386  Sum_probs=67.0

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |+..-.+|+|+||.||+++- ..|+.||||++.+  .++.-.+--+||+++|++|+|||+|.|+-++.....++||+||+
T Consensus         4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~   83 (396)
T KOG0593|consen    4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYC   83 (396)
T ss_pred             HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeec
Confidence            44566899999999999994 5699999999865  23333456899999999999999999999999999999999998


Q ss_pred             cC
Q 036177          219 LN  220 (221)
Q Consensus       219 ~~  220 (221)
                      .+
T Consensus        84 dh   85 (396)
T KOG0593|consen   84 DH   85 (396)
T ss_pred             ch
Confidence            63

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.37  E-value=2.3e-12  Score=98.69  Aligned_cols=81  Identities=22%  Similarity=0.342  Sum_probs=70.8

Q ss_pred             CccccceecccCceEEEEEE-eCCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC-eeEEEEEc
Q 036177          141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE-VPLLVYEF  217 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-~~~lv~e~  217 (221)
                      ++.....||+|+.|+||++. ...+..+|+|.+.. .++...++..+|++++.+.+||+||.++|++.... ...|+|||
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY  159 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY  159 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence            44557899999999999998 45688899999854 55566788999999999999999999999999988 59999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      |.+|
T Consensus       160 MDgG  163 (364)
T KOG0581|consen  160 MDGG  163 (364)
T ss_pred             cCCC
Confidence            9987

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.36  E-value=3.6e-12  Score=102.53  Aligned_cols=81  Identities=21%  Similarity=0.278  Sum_probs=69.6

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      .|...+.||+|+||.||++.. ..+..+|+|.++..   .......+.+|+.+|.+++||||+++++.+...+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            466788999999999999984 56789999998642   23345678999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~gg   86 (381)
T cd05626          82 YIPGG   86 (381)
T ss_pred             cCCCC
Confidence            99876

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.36  E-value=5.9e-13  Score=107.72  Aligned_cols=88  Identities=25%  Similarity=0.468  Sum_probs=76.3

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLE  207 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  207 (221)
                      ....+|+++.+.+.+...||+|+||+||+|.| .| .||||.++.  .+....++|.+|+..+++-+|.||+=|.|++..
T Consensus       382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~w-hG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~  459 (678)
T KOG0193|consen  382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRW-HG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN  459 (678)
T ss_pred             ccccccccCHHHhhccceeccccccceeeccc-cc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence            44588999999999999999999999999998 43 499999865  445567899999999999999999999999988


Q ss_pred             CCeeEEEEEcccC
Q 036177          208 TEVPLLVYEFILN  220 (221)
Q Consensus       208 ~~~~~lv~e~~~~  220 (221)
                      ++. .||+.++++
T Consensus       460 p~~-AIiTqwCeG  471 (678)
T KOG0193|consen  460 PPL-AIITQWCEG  471 (678)
T ss_pred             Cce-eeeehhccC
Confidence            876 888887754

>PHA02988 hypothetical protein; Provisional

Probab=99.36  E-value=8.4e-12  Score=96.42  Aligned_cols=75  Identities=23%  Similarity=0.477  Sum_probs=64.1

Q ss_pred             ceecccCceEEEEEEeCCCcEEEEEeccCCCccc---HHHHHHHHHHHHcCCCCceeeeeeEEEe----CCeeEEEEEcc
Q 036177          146 RIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESN---VEQFINEVVILSQINHRNVVKLLGCCLE----TEVPLLVYEFI  218 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~g~~~~----~~~~~lv~e~~  218 (221)
                      ..|++|+++.||+|.+ ++..||+|.++......   .+.|.+|+.+|.+++||||++++|++..    ....+++|||+
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            5799999999999999 78999999987533322   4678899999999999999999999876    34678999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus       105 ~~g  107 (283)
T PHA02988        105 TRG  107 (283)
T ss_pred             CCC
Confidence            986

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.36  E-value=4.3e-13  Score=108.01  Aligned_cols=81  Identities=28%  Similarity=0.465  Sum_probs=70.1

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++|.+.+.||+|+||.||+|+. .+.+.||+|.+..  ....+.+.+.+|++++++++||||+.++..+.....+++|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            4567778999999999999984 4578899998855  445567789999999999999999999999999999999999


Q ss_pred             cccC
Q 036177          217 FILN  220 (221)
Q Consensus       217 ~~~~  220 (221)
                      |+.+
T Consensus        82 ~a~g   85 (808)
T KOG0597|consen   82 YAVG   85 (808)
T ss_pred             hhhh
Confidence            9854

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.36  E-value=2e-12  Score=98.92  Aligned_cols=84  Identities=32%  Similarity=0.491  Sum_probs=73.0

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      ..++|.+.++||+|+||+|+..+. ..++..|+|.++.   ....+.+...+|..+|.+++||.||+|+-.+.+.+.+||
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            346788899999999999999984 4588899998865   233456778999999999999999999999999999999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      |+||+++|
T Consensus       103 Vld~~~GG  110 (357)
T KOG0598|consen  103 VLDYLNGG  110 (357)
T ss_pred             EEeccCCc
Confidence            99999998

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.35  E-value=4.7e-13  Score=107.96  Aligned_cols=82  Identities=28%  Similarity=0.507  Sum_probs=72.0

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      .+.|+++.+.+.-++-||+|+-|.||.|++ .+..||||+++...+       .+++.|++|+||||+.|.|+|++..-.
T Consensus       116 ~e~WeiPFe~IsELeWlGSGaQGAVF~Grl-~netVAVKKV~elkE-------TdIKHLRkLkH~NII~FkGVCtqsPcy  187 (904)
T KOG4721|consen  116 EELWEIPFEEISELEWLGSGAQGAVFLGRL-HNETVAVKKVRELKE-------TDIKHLRKLKHPNIITFKGVCTQSPCY  187 (904)
T ss_pred             hhhccCCHHHhhhhhhhccCcccceeeeec-cCceehhHHHhhhhh-------hhHHHHHhccCcceeeEeeeecCCcee
Confidence            356888888888888999999999999999 788999998865433       567789999999999999999999988


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      .|||||++.|
T Consensus       188 CIiMEfCa~G  197 (904)
T KOG4721|consen  188 CIIMEFCAQG  197 (904)
T ss_pred             EEeeeccccc
Confidence            9999999987

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.35  E-value=4.5e-12  Score=96.55  Aligned_cols=85  Identities=25%  Similarity=0.454  Sum_probs=73.6

Q ss_pred             hhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      .+..++|++.+.||+|+||.||++...++..+++|.+..... ..+.|.+|+.+++.++||||+++++.....+..++++
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05072           2 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT   80 (261)
T ss_pred             cCchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence            345667888999999999999999987788899998765332 3578999999999999999999999998888999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        81 e~~~~~   86 (261)
T cd05072          81 EYMAKG   86 (261)
T ss_pred             ecCCCC
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.35  E-value=1.8e-12  Score=103.94  Aligned_cols=89  Identities=31%  Similarity=0.508  Sum_probs=74.3

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEe------CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeeeeeE
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKLLGC  204 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~------~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~  204 (221)
                      +.|..+.++|.+.+.||+|+||.||++..      .++..||+|.++.. .......+.+|+.+|+.+ +||||++++|.
T Consensus        31 ~~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~  110 (374)
T cd05106          31 EKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGA  110 (374)
T ss_pred             ccccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeE
Confidence            45667778899999999999999999873      12357999998753 333456789999999999 89999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +...+..+++|||+++|
T Consensus       111 ~~~~~~~~lv~ey~~~g  127 (374)
T cd05106         111 CTHGGPVLVITEYCCYG  127 (374)
T ss_pred             ecCCCCeEEeHhhccCC
Confidence            99999999999999876

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.35  E-value=5e-12  Score=96.07  Aligned_cols=81  Identities=27%  Similarity=0.449  Sum_probs=69.9

Q ss_pred             cCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      ++|...+.||+|+||.||++.+.++..+|+|.++... .....|.+|+.+|++++||||+++++.+...+..+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            3466678999999999999998777789999876433 234679999999999999999999999999999999999998


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus        83 ~~   84 (256)
T cd05114          83 NG   84 (256)
T ss_pred             CC
Confidence            76

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.34  E-value=2.2e-12  Score=98.17  Aligned_cols=86  Identities=26%  Similarity=0.471  Sum_probs=75.9

Q ss_pred             hhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      +.+..+|++.+.||+|+||.||++...++..+++|.+..........+.+|+.+++.++||||+++++.+...+..+++|
T Consensus         2 ~~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (261)
T cd05148           2 ERPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT   81 (261)
T ss_pred             cCcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence            44566788899999999999999998778899999987655555678999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        82 e~~~~~   87 (261)
T cd05148          82 ELMEKG   87 (261)
T ss_pred             eecccC
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.34  E-value=8.4e-12  Score=95.47  Aligned_cols=87  Identities=23%  Similarity=0.321  Sum_probs=73.9

Q ss_pred             hhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      ++..++++.....||+|+||.||++.. .++..+++|.+........+.+.+|+.+++.++|+||+++++.+...+..++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            345556666677899999999999985 4577899998876555566789999999999999999999999999999999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ++||+++|
T Consensus        83 v~e~~~~~   90 (268)
T cd06624          83 FMEQVPGG   90 (268)
T ss_pred             EEecCCCC
Confidence            99999865

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.34  E-value=4.3e-14  Score=104.72  Aligned_cols=84  Identities=30%  Similarity=0.516  Sum_probs=70.4

Q ss_pred             hccCccccceecccCceEEEEEE-eCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeee-EEEeCCe-eE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLG-CCLETEV-PL  212 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g-~~~~~~~-~~  212 (221)
                      +..+|.+.++||+|+||.||++. +.+|..+|.|.++-  .+....+....|+.+|++|+|||||++++ .....++ ++
T Consensus        17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evln   96 (375)
T KOG0591|consen   17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLN   96 (375)
T ss_pred             cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhH
Confidence            34557778999999999999998 67899999998864  45566778999999999999999999998 4444444 88


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      |+|||+..|
T Consensus        97 ivmE~c~~G  105 (375)
T KOG0591|consen   97 IVMELCDAG  105 (375)
T ss_pred             HHHHhhccc
Confidence            999999877

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.34  E-value=7e-12  Score=99.09  Aligned_cols=84  Identities=24%  Similarity=0.312  Sum_probs=71.5

Q ss_pred             hccCccccceecccCceEEEEEEeC-CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ..++|+..+.||+|+||.||++... .+..+|+|.++.. .......+.+|+.+|++++||||+++++++...+..+++|
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence            3467888899999999999999854 5778999987653 3334567999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        83 e~~~~~   88 (333)
T cd06650          83 EHMDGG   88 (333)
T ss_pred             ecCCCC
Confidence            999875

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.33  E-value=4.6e-12  Score=100.07  Aligned_cols=87  Identities=29%  Similarity=0.421  Sum_probs=71.1

Q ss_pred             hhhhccCccccceecccCceEEEEEE-eCCCcEEEEEeccCCC--c------------ccHHHHHHHHHHHHcCCCCcee
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVH--E------------SNVEQFINEVVILSQINHRNVV  199 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~--~------------~~~~~~~~e~~~l~~l~h~niv  199 (221)
                      -....++|.+.+.||+|.||.|-++. ..++..+|+|++....  .            ...+...+|+.+|++++|||||
T Consensus        92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV  171 (576)
T KOG0585|consen   92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV  171 (576)
T ss_pred             cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence            34455789999999999999999998 4578899999874311  0            1235789999999999999999


Q ss_pred             eeeeEEEeC--CeeEEEEEcccCC
Q 036177          200 KLLGCCLET--EVPLLVYEFILNG  221 (221)
Q Consensus       200 ~l~g~~~~~--~~~~lv~e~~~~G  221 (221)
                      +|+-+..++  +.+|||+||+.+|
T Consensus       172 ~LiEvLDDP~s~~~YlVley~s~G  195 (576)
T KOG0585|consen  172 KLIEVLDDPESDKLYLVLEYCSKG  195 (576)
T ss_pred             EEEEeecCcccCceEEEEEeccCC
Confidence            999988664  5899999999877

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.33  E-value=8.3e-12  Score=98.56  Aligned_cols=83  Identities=23%  Similarity=0.281  Sum_probs=71.3

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      .++|+..+.||+|+||.||++.. ..+..+|+|.++.. .......|.+|+.+|++++||||+++++++...+..+++||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            46678889999999999999985 45788999988653 33345679999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        84 ~~~~~   88 (331)
T cd06649          84 HMDGG   88 (331)
T ss_pred             cCCCC
Confidence            99875

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=5.4e-12  Score=100.86  Aligned_cols=81  Identities=26%  Similarity=0.370  Sum_probs=69.6

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|+..+.||+|+||.||++.. ..+..||+|.++..   .......+.+|+.+|..++||||+++++.+...+..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME   81 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence            577789999999999999985 46889999998642   22334568899999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~~g   86 (364)
T cd05599          82 YLPGG   86 (364)
T ss_pred             CCCCc
Confidence            99876

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=6.4e-12  Score=100.95  Aligned_cols=81  Identities=22%  Similarity=0.335  Sum_probs=69.2

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|...+.||+|+||.||++.. .++..+|+|.+...   .......+.+|+.+|.+++||||+++++.+...+..++|||
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E   81 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME   81 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence            567788999999999999984 56889999987542   22335678899999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~gg   86 (377)
T cd05629          82 FLPGG   86 (377)
T ss_pred             CCCCC
Confidence            99876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.33  E-value=4.8e-12  Score=100.77  Aligned_cols=82  Identities=29%  Similarity=0.381  Sum_probs=70.1

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|...+.||+|+||.||++.. .++..||+|.+... .......|.+|+.+|+.++|+||+++++++...+..+++|||
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            4566678999999999999985 46889999998642 333456799999999999999999999999989999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus       154 ~~~~  157 (353)
T PLN00034        154 MDGG  157 (353)
T ss_pred             CCCC
Confidence            9875

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.33  E-value=7.2e-12  Score=100.82  Aligned_cols=81  Identities=20%  Similarity=0.261  Sum_probs=69.3

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      .|...+.||+|+||.||++.. ..+..+|+|.+...   .......+.+|+.+|+.++||||+++++.+...+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            466788999999999999984 46788999988642   22345678999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~gg   86 (382)
T cd05625          82 YIPGG   86 (382)
T ss_pred             CCCCC
Confidence            99876

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.32  E-value=7.6e-12  Score=101.44  Aligned_cols=83  Identities=28%  Similarity=0.384  Sum_probs=72.6

Q ss_pred             ccCccccceecccCceEEEEEE-eCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ...|.+.+.||+|.|+.|..+. ...+..||+|.+..  .....+..+.+|+.+|..++|||||+|+.+......+|+||
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~  134 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM  134 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence            4567889999999999999998 34688999999865  44455567999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||..+|
T Consensus       135 eya~~g  140 (596)
T KOG0586|consen  135 EYASGG  140 (596)
T ss_pred             EeccCc
Confidence            999876

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.32  E-value=7.2e-12  Score=98.86  Aligned_cols=82  Identities=21%  Similarity=0.370  Sum_probs=70.5

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||.||++.. .++..+|+|.++..   .......+.+|+.+|.+++||||+++++.+...+..+++|
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            5677889999999999999985 45789999987642   2334567899999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        98 e~~~~~  103 (329)
T PTZ00263         98 EFVVGG  103 (329)
T ss_pred             cCCCCC
Confidence            999875

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.32  E-value=8.2e-12  Score=96.60  Aligned_cols=87  Identities=28%  Similarity=0.436  Sum_probs=71.5

Q ss_pred             hhhhccCccccceecccCceEEEEEEeC------CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEe
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLE  207 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  207 (221)
                      |+...++|++.+.||+|+||.||+|...      .+..||+|.++.. .......+.+|+.+++.++||||+++++.+..
T Consensus         1 ~~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   80 (288)
T cd05061           1 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSK   80 (288)
T ss_pred             CcccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence            4456677888999999999999999742      2447999987643 23334568999999999999999999999988


Q ss_pred             CCeeEEEEEcccCC
Q 036177          208 TEVPLLVYEFILNG  221 (221)
Q Consensus       208 ~~~~~lv~e~~~~G  221 (221)
                      .+..+++|||+++|
T Consensus        81 ~~~~~lv~e~~~~g   94 (288)
T cd05061          81 GQPTLVVMELMAHG   94 (288)
T ss_pred             CCCcEEEEeCCCCC
Confidence            88999999999876

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.32  E-value=1.5e-11  Score=94.05  Aligned_cols=83  Identities=24%  Similarity=0.410  Sum_probs=71.8

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      .++|...+.||+|+||.||++.. .++..+|+|.+..........+.+|+.++.+++||||+++++.+...+..++++||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            35677889999999999999985 56788999988754444556788999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        88 ~~~~   91 (267)
T cd06646          88 CGGG   91 (267)
T ss_pred             CCCC
Confidence            9875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=1e-11  Score=98.13  Aligned_cols=81  Identities=31%  Similarity=0.477  Sum_probs=69.7

Q ss_pred             CccccceecccCceEEEEEEeC-CCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|.+.+.||+|+||.||++... .+..||+|.++..   .......+.+|+.+|..++||||+++++.+...+..+++||
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   81 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME   81 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence            5777889999999999999964 5789999988642   22345678999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~g~   86 (333)
T cd05600          82 YVPGG   86 (333)
T ss_pred             CCCCC
Confidence            99876

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.31  E-value=1.2e-11  Score=99.42  Aligned_cols=81  Identities=21%  Similarity=0.255  Sum_probs=69.3

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|++.+.||+|+||.||++.. ..+..+|+|.+...   .......+.+|+.+|.+++||||+++++.+...+..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            567789999999999999984 45889999988642   22334668899999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~~g   86 (376)
T cd05598          82 YIPGG   86 (376)
T ss_pred             CCCCC
Confidence            99876

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.31  E-value=1.6e-11  Score=93.42  Aligned_cols=86  Identities=30%  Similarity=0.487  Sum_probs=74.2

Q ss_pred             hhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      |+.+.++|.+.+.||+|+||.||++...++..+++|.+.... ....++.+|+.++++++||||+++++........+++
T Consensus         1 ~~~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   79 (261)
T cd05034           1 WEIPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV   79 (261)
T ss_pred             CccchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEE
Confidence            345677888899999999999999998777889999887533 3356799999999999999999999999888889999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        80 ~e~~~~~   86 (261)
T cd05034          80 TEYMSKG   86 (261)
T ss_pred             EeccCCC
Confidence            9999865

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.31  E-value=1.1e-11  Score=94.55  Aligned_cols=85  Identities=26%  Similarity=0.444  Sum_probs=73.3

Q ss_pred             hhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      +.+++++.+.+.||+|+||.||++...++..+|+|.++... ...++|.+|+.++++++||||+++.+.+...+..+++|
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05068           2 EIDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT   80 (261)
T ss_pred             ccchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence            44567788899999999999999998777889999987533 23567999999999999999999999999889999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        81 e~~~~~   86 (261)
T cd05068          81 ELMKYG   86 (261)
T ss_pred             ecccCC
Confidence            999764

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.31  E-value=6.9e-12  Score=96.42  Aligned_cols=75  Identities=24%  Similarity=0.439  Sum_probs=62.7

Q ss_pred             eecccCceEEEEEEeCC-------------------------CcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeee
Q 036177          147 IIGQGGQGTVFKGMLTD-------------------------GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKL  201 (221)
Q Consensus       147 ~lg~G~fg~v~~~~~~~-------------------------~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l  201 (221)
                      +||+|+||.||+|.+..                         ...|++|.+.........+|.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            68999999999997411                         13488888866444445679999999999999999999


Q ss_pred             eeEEEeCCeeEEEEEcccCC
Q 036177          202 LGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       202 ~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +|++......++||||+++|
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g  101 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHG  101 (274)
T ss_pred             EEEEEeCCceEEEEecCCCC
Confidence            99999999999999999976

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=8.7e-12  Score=95.98  Aligned_cols=84  Identities=27%  Similarity=0.415  Sum_probs=73.8

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +.++|.+.+.||+|+||.||++.. .++..+++|..........+.|.+|+.++++++||||+++++.+......+++||
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            456678889999999999999986 4578899999876666666789999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        83 ~~~~~   87 (280)
T cd06611          83 FCDGG   87 (280)
T ss_pred             ccCCC
Confidence            99875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.30  E-value=1.3e-11  Score=96.90  Aligned_cols=89  Identities=21%  Similarity=0.393  Sum_probs=77.6

Q ss_pred             hhhhhhccCccccceecccCceEEEEEE-eCCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ..+....+.|++..+||.|.-++||++. .+.+..||||++.- ....+..++++|+..|+-++||||+++...+..+..
T Consensus        19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~   98 (516)
T KOG0582|consen   19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSE   98 (516)
T ss_pred             ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecce
Confidence            3445566789999999999999999998 67789999999864 333447889999999999999999999999999999


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      +|+||.||.+|
T Consensus        99 LWvVmpfMa~G  109 (516)
T KOG0582|consen   99 LWVVMPFMAGG  109 (516)
T ss_pred             eEEeehhhcCC
Confidence            99999999987

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.30  E-value=1.3e-11  Score=97.78  Aligned_cols=84  Identities=27%  Similarity=0.457  Sum_probs=69.7

Q ss_pred             hccCccccceecccCceEEEEEEeCC--CcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLTD--GRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~~--~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      ..++|.+.+.||+|+||.||++....  +..+|+|.+..   ........+.+|+.+++.++||||+++++++...+..+
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY  107 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence            34567778999999999999998533  35799998753   22334567899999999999999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      ++|||+++|
T Consensus       108 lv~Ey~~~g  116 (340)
T PTZ00426        108 LVLEFVIGG  116 (340)
T ss_pred             EEEeCCCCC
Confidence            999999876

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.29  E-value=1.8e-11  Score=93.51  Aligned_cols=83  Identities=27%  Similarity=0.476  Sum_probs=70.0

Q ss_pred             ccCccccceecccCceEEEEEEeCC----CcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTD----GRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~----~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      .++|+..+.||+|+||.||+|.+..    ...|++|.++. ........|.+|+.++++++||||+++++.....+..++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i   82 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI   82 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence            3567788999999999999998632    35799998865 334445679999999999999999999999998899999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      +|||+++|
T Consensus        83 v~e~~~~~   90 (266)
T cd05033          83 ITEYMENG   90 (266)
T ss_pred             EEEcCCCC
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.29  E-value=5.9e-12  Score=97.62  Aligned_cols=81  Identities=16%  Similarity=0.226  Sum_probs=68.8

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|...+.||+|+||.||++.. .++..+|+|.+...   .....+.+.+|+.+|++++||||+++++.....+..+++||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   81 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME   81 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence            567788999999999999985 36889999987542   22335668899999999999999999999988889999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~~~   86 (291)
T cd05612          82 YVPGG   86 (291)
T ss_pred             CCCCC
Confidence            99875

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.29  E-value=1.4e-11  Score=98.45  Aligned_cols=82  Identities=23%  Similarity=0.327  Sum_probs=69.5

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|+..+.||+|+||.||++.. ..+..+|+|.++..   .......+.+|+.++.+++||||+++++.+......++||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            3577788999999999999984 45889999988642   2233456889999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        81 E~~~gg   86 (363)
T cd05628          81 EFLPGG   86 (363)
T ss_pred             cCCCCC
Confidence            999876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.29  E-value=2.2e-11  Score=94.16  Aligned_cols=80  Identities=28%  Similarity=0.400  Sum_probs=67.6

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      |...+.||+|+||.||++.. .++..+|+|.+...   .......+.+|+.+|.+++|+||+++.+.+...+..++++||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            55678899999999999984 57889999987542   222334688999999999999999999999998999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        82 ~~~g   85 (285)
T cd05631          82 MNGG   85 (285)
T ss_pred             cCCC
Confidence            9876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.29  E-value=2.9e-11  Score=93.10  Aligned_cols=81  Identities=25%  Similarity=0.357  Sum_probs=69.5

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +|+..+.||+|+||.||++.. .++..+|+|.+... ......+|.+|+.++++++||||+++++.+...+..++++||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            466788999999999999984 56788999987542 3334567999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (279)
T cd06619          82 DGG   84 (279)
T ss_pred             CCC
Confidence            875

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.28  E-value=7e-12  Score=99.48  Aligned_cols=87  Identities=33%  Similarity=0.473  Sum_probs=70.8

Q ss_pred             hhhhccCccccceecccCceEEEEEEe------CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeeeeeEEE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKLLGCCL  206 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~------~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~  206 (221)
                      |..+.++|.+.+.||+|+||.||++..      ..++.||+|.++.. .......+.+|+.+|.++ +||||+++++.+.
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (343)
T cd05103           2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT   81 (343)
T ss_pred             cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence            455677889999999999999999973      24678999998753 233456789999999999 7899999999886


Q ss_pred             eC-CeeEEEEEcccCC
Q 036177          207 ET-EVPLLVYEFILNG  221 (221)
Q Consensus       207 ~~-~~~~lv~e~~~~G  221 (221)
                      .. ...+++|||+++|
T Consensus        82 ~~~~~~~lv~ey~~~g   97 (343)
T cd05103          82 KPGGPLMVIVEFCKFG   97 (343)
T ss_pred             cCCCceEEEEeccCCC
Confidence            54 5678999999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.28  E-value=2.1e-11  Score=92.80  Aligned_cols=84  Identities=26%  Similarity=0.440  Sum_probs=71.3

Q ss_pred             hhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++..++|.+.+.||+|+||.||++...++..+|+|.+..... ....|.+|+.++++++||||+++.+.. ..+..++++
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~   79 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIIT   79 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEE
Confidence            456677888999999999999999987889999998875333 356799999999999999999999876 455689999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        80 e~~~~~   85 (260)
T cd05067          80 EYMENG   85 (260)
T ss_pred             EcCCCC
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.28  E-value=1.5e-11  Score=95.06  Aligned_cols=81  Identities=27%  Similarity=0.431  Sum_probs=69.3

Q ss_pred             CccccceecccCceEEEEEEeC-CCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      +|.+.+.||+|+||.||++... ++..+|+|.++..  .....+.+.+|+.+++.++||||+++.+++...+..++||||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY   81 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence            5777889999999999999964 5788999987642  233456788999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        82 ~~~~   85 (287)
T cd07848          82 VEKN   85 (287)
T ss_pred             CCCC
Confidence            9865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.28  E-value=2e-11  Score=94.11  Aligned_cols=82  Identities=23%  Similarity=0.488  Sum_probs=68.9

Q ss_pred             cCccccceecccCceEEEEEEe-----CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-----TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-----~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      +++++.+.||+|+||.||+|.+     ..+..+++|.+.. ........|.+|+.++++++||||+++++........++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4577788999999999999974     2456899998875 333344679999999999999999999999988889999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      +|||+++|
T Consensus        85 v~e~~~~~   92 (283)
T cd05090          85 LFEYLNQG   92 (283)
T ss_pred             EEEcCCCC
Confidence            99999865

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.28  E-value=5e-12  Score=95.90  Aligned_cols=81  Identities=22%  Similarity=0.342  Sum_probs=65.5

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCC--cccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--CeeEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH--ESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPLLV  214 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv  214 (221)
                      +.|...+.|++|.||.||+|+. +++..||+|+++-..  ..---.-+||+.+|.+.+|||||.+--+....  +..|||
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            4567788999999999999994 568899999986522  22233468999999999999999998877654  579999


Q ss_pred             EEcccC
Q 036177          215 YEFILN  220 (221)
Q Consensus       215 ~e~~~~  220 (221)
                      |||+++
T Consensus       156 Me~~Eh  161 (419)
T KOG0663|consen  156 MEYVEH  161 (419)
T ss_pred             HHHHHh
Confidence            999864

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.28  E-value=1.8e-11  Score=94.15  Aligned_cols=86  Identities=29%  Similarity=0.509  Sum_probs=71.1

Q ss_pred             hhhccCccccceecccCceEEEEEEeC------CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      ....++|++.+.||+|+||.||++...      .+..+|+|.+... ......+|.+|+.+++.++||||+++++.+...
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~   81 (277)
T cd05062           2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG   81 (277)
T ss_pred             cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            345677888999999999999998742      2457999988642 233456799999999999999999999999888


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      ...+++|||+++|
T Consensus        82 ~~~~lv~e~~~~~   94 (277)
T cd05062          82 QPTLVIMELMTRG   94 (277)
T ss_pred             CCeEEEEecCCCC
Confidence            8999999999875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.28  E-value=2.7e-11  Score=94.66  Aligned_cols=81  Identities=22%  Similarity=0.280  Sum_probs=69.0

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +|...+.||+|+||.||++.. .++..+++|.++.. .......+.+|++++.+++||||+++++.+...+..++++||+
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~   81 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM   81 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence            577788999999999999984 45778899987643 3334567899999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (308)
T cd06615          82 DGG   84 (308)
T ss_pred             CCC
Confidence            875

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.27  E-value=1.6e-11  Score=94.66  Aligned_cols=82  Identities=27%  Similarity=0.471  Sum_probs=67.9

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC--eeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETE--VPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~--~~~lv~e  216 (221)
                      .++...+.||+|+||.||.+... +|...|||.....+....+.+.+|+.+|.+++|||||+++|.....+  ..++.||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            34556889999999999999964 48899999876543333677999999999999999999999855544  6889999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        97 y~~~G  101 (313)
T KOG0198|consen   97 YAPGG  101 (313)
T ss_pred             ccCCC
Confidence            99987

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.27  E-value=1.6e-11  Score=98.39  Aligned_cols=86  Identities=21%  Similarity=0.329  Sum_probs=71.8

Q ss_pred             hhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      ....++|...+.||+|+||.||++.. ..+..+|+|.+..   ........+.+|+.+|+.++||||+++++.+...+..
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~  118 (370)
T cd05596          39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL  118 (370)
T ss_pred             CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            34456788899999999999999985 4578999998854   2223345588999999999999999999999999999


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus       119 ~lv~Ey~~gg  128 (370)
T cd05596         119 YMVMEYMPGG  128 (370)
T ss_pred             EEEEcCCCCC
Confidence            9999999876

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.27  E-value=3.1e-11  Score=94.10  Aligned_cols=81  Identities=30%  Similarity=0.462  Sum_probs=68.8

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCC-cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|.+.+.||+|+||.||++... ++..+|+|.++... ......+.+|+.+++.++||||+++.++.......++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY   84 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence            56788899999999999999953 68899999886422 23334678999999999999999999999988999999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus        85 ~~~   87 (303)
T cd07869          85 VHT   87 (303)
T ss_pred             CCc
Confidence            864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.27  E-value=2.3e-11  Score=94.02  Aligned_cols=80  Identities=28%  Similarity=0.407  Sum_probs=67.1

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCCC---cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH---ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      |+..+.||+|+||.||++.. .++..||+|.+....   ......+.+|+.+++.++||||+++.+.+...+..+++|||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            55678899999999999985 468899999886422   22234578999999999999999999999888899999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        82 ~~~~   85 (285)
T cd05605          82 MNGG   85 (285)
T ss_pred             cCCC
Confidence            9875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.27  E-value=3.2e-12  Score=99.48  Aligned_cols=82  Identities=23%  Similarity=0.453  Sum_probs=71.8

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      -+|.+.+.||+|.||.|-++.- ..|+.||||.++.   .+.++.-...+|+++|+.|+||||+.++-++...+.+.|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            3467788999999999999973 6799999998865   45555566889999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||..+|
T Consensus       133 EYaS~G  138 (668)
T KOG0611|consen  133 EYASGG  138 (668)
T ss_pred             EecCCc
Confidence            999887

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.27  E-value=2.5e-11  Score=92.27  Aligned_cols=81  Identities=26%  Similarity=0.436  Sum_probs=69.0

Q ss_pred             cCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      ++|.+.+.||+|+||.||.+.+.++..+|+|.+.... .....|.+|+.++.+++||||+++++++...++.+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            3466678999999999999988666779999886533 234679999999999999999999999988888999999987


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus        83 ~~   84 (256)
T cd05113          83 NG   84 (256)
T ss_pred             CC
Confidence            65

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.27  E-value=7.9e-13  Score=104.24  Aligned_cols=80  Identities=33%  Similarity=0.498  Sum_probs=67.3

Q ss_pred             cCccccceecccCceEEEEEE-eCCCcEEEEEeccCCCcc-cHHHHHHHHHHHHcCC-CCceeeeeeEEEeCC-eeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHES-NVEQFINEVVILSQIN-HRNVVKLLGCCLETE-VPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~-~~~lv~  215 (221)
                      ++|...+.||.|.||.||+++ ...+..||||+++..-.. +...-+||++.|++++ ||||++|.-+..+.+ .+++||
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf   89 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF   89 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence            457778899999999999998 567889999998763333 2233579999999997 999999999998877 999999


Q ss_pred             Eccc
Q 036177          216 EFIL  219 (221)
Q Consensus       216 e~~~  219 (221)
                      |||.
T Consensus        90 E~Md   93 (538)
T KOG0661|consen   90 EFMD   93 (538)
T ss_pred             Hhhh
Confidence            9996

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.27  E-value=2.3e-11  Score=97.45  Aligned_cols=87  Identities=24%  Similarity=0.368  Sum_probs=72.3

Q ss_pred             hhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      +....++|...+.||+|+||.||++.. .++..+|+|.+..   ........+.+|+.+++.++||||+++++.+...+.
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY  117 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            344456788899999999999999985 4578899998753   222334568899999999999999999999999999


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++||||+++|
T Consensus       118 ~~lv~Ey~~gg  128 (370)
T cd05621         118 LYMVMEYMPGG  128 (370)
T ss_pred             EEEEEcCCCCC
Confidence            99999999876

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.26  E-value=2.7e-12  Score=105.62  Aligned_cols=78  Identities=33%  Similarity=0.565  Sum_probs=67.8

Q ss_pred             ccceecccCceEEEEEE-eCCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC------CeeEEEE
Q 036177          144 VSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET------EVPLLVY  215 (221)
Q Consensus       144 ~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~~~~lv~  215 (221)
                      ..+.||+|+||.||+|+ ...|+.||||..+. .....++.+.+|+++|++|+|||||+++++-...      ..+.++|
T Consensus        17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm   96 (732)
T KOG4250|consen   17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM   96 (732)
T ss_pred             ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence            36789999999999999 66799999999876 5566678899999999999999999999987543      3678999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        97 EyC~gG  102 (732)
T KOG4250|consen   97 EYCSGG  102 (732)
T ss_pred             eecCCC
Confidence            999987

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.26  E-value=2.2e-11  Score=94.00  Aligned_cols=82  Identities=22%  Similarity=0.307  Sum_probs=70.2

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|+..+.||+|+||.||++.. .++..+|+|.+... .......|.+|+.+++.++||||+++++.+...+..++++||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            4567788999999999999985 45888999987643 334457899999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        85 ~~~~   88 (284)
T cd06620          85 MDCG   88 (284)
T ss_pred             CCCC
Confidence            9875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.26  E-value=3.8e-11  Score=95.74  Aligned_cols=83  Identities=29%  Similarity=0.439  Sum_probs=71.5

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCC---cccHHHHHHHHHHHHcCC-CCceeeeeeEEEeCCeeEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH---ESNVEQFINEVVILSQIN-HRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~l  213 (221)
                      ...|.+.+.||+|.||.||++.- .+|..+|+|.+....   ......+.+|+.+|.++. |||||.+.+.+......++
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            35577789999999999999985 448999999886522   234578999999999997 9999999999999999999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      |||++.+|
T Consensus       114 vmEL~~GG  121 (382)
T KOG0032|consen  114 VMELCEGG  121 (382)
T ss_pred             EEEecCCc
Confidence            99999876

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.26  E-value=4.2e-12  Score=102.00  Aligned_cols=84  Identities=25%  Similarity=0.478  Sum_probs=74.5

Q ss_pred             hccCccccceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +...|..-..||+|+-|.||.+. ...+..||||.+........+-.++|+.+|+..+|+|||+++..++..+++|+|||
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME  350 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME  350 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence            44567778899999999999998 56788999999877666667779999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      ||++|
T Consensus       351 ym~gg  355 (550)
T KOG0578|consen  351 YMEGG  355 (550)
T ss_pred             ecCCC
Confidence            99987

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.26  E-value=3.5e-11  Score=91.36  Aligned_cols=81  Identities=31%  Similarity=0.521  Sum_probs=70.8

Q ss_pred             ccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      .++|++.+.||+|.||.||++.. .++.+++|.++.... ....+.+|+.++++++|+||+++++.+...+..+++|||+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            45677789999999999999987 578899999876443 5678999999999999999999999998888999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        83 ~~~   85 (256)
T cd05039          83 AKG   85 (256)
T ss_pred             CCC
Confidence            865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.25  E-value=3e-11  Score=95.06  Aligned_cols=76  Identities=21%  Similarity=0.281  Sum_probs=65.1

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +.||+|+||.||++.. .++..||+|.++..   .......+.+|+.+++.++||||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            3689999999999984 46889999988642   3334567889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.25  E-value=4.4e-11  Score=92.69  Aligned_cols=85  Identities=27%  Similarity=0.450  Sum_probs=73.9

Q ss_pred             hhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      .+.+.|++.+.||+|+||.||++.. ..+..+++|.+..........+.+|+.+++.++||||+++++.+...+..+++|
T Consensus         9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   88 (292)
T cd06644           9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI   88 (292)
T ss_pred             CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence            3446678889999999999999985 457889999987666666778999999999999999999999998888999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        89 e~~~~~   94 (292)
T cd06644          89 EFCPGG   94 (292)
T ss_pred             ecCCCC
Confidence            999875

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.25  E-value=3e-11  Score=92.43  Aligned_cols=82  Identities=30%  Similarity=0.509  Sum_probs=68.3

Q ss_pred             cCccccceecccCceEEEEEEeC-C---CcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-D---GRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~---~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .+|.+.+.||+|+||.||++... .   ...+|+|.++.. .......|.+|+.++.+++||||+++.+.+...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            45677889999999999999852 2   336899988652 334456899999999999999999999999988999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        84 ~e~~~~~   90 (267)
T cd05066          84 TEYMENG   90 (267)
T ss_pred             EEcCCCC
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.25  E-value=4.6e-11  Score=92.47  Aligned_cols=81  Identities=28%  Similarity=0.401  Sum_probs=68.1

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|...+.||+|+||.||++.. .++..||+|.++. ........+.+|+.++++++||||++++++....+..+++|||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            4577788999999999999984 4678999998864 2233345688999999999999999999999888889999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus        85 ~~~   87 (288)
T cd07871          85 LDS   87 (288)
T ss_pred             CCc
Confidence            864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.25  E-value=5.4e-11  Score=90.84  Aligned_cols=82  Identities=28%  Similarity=0.469  Sum_probs=69.8

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||.||++.. .++..+|+|.++.   ........|.+|+.+++.++||||+++++.+...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            4577789999999999999984 4688999998754   23334557899999999999999999999999889999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        82 e~~~~~   87 (267)
T cd08228          82 ELADAG   87 (267)
T ss_pred             EecCCC
Confidence            999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.25  E-value=4e-11  Score=90.71  Aligned_cols=76  Identities=38%  Similarity=0.622  Sum_probs=65.7

Q ss_pred             ceecccCceEEEEEEeCCCcEEEEEeccCCC-cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          146 RIIGQGGQGTVFKGMLTDGRIVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +.||+|+||.||++...++..+|+|.++... ......|.+|+.++++++||||+++++.+...+..+++|||+++|
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   77 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG   77 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence            3689999999999998788899999886533 333457999999999999999999999999888999999999865

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.25  E-value=3.3e-11  Score=95.17  Aligned_cols=81  Identities=20%  Similarity=0.353  Sum_probs=69.1

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|.+.+.||+|+||.||++.. .++..+|+|.+..   ........|.+|..++..++|+||+++++.+...+..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD   81 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence            577789999999999999985 4588999998854   223345568899999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~g~   86 (331)
T cd05597          82 YYVGG   86 (331)
T ss_pred             cCCCC
Confidence            99876

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.25  E-value=2e-11  Score=94.82  Aligned_cols=84  Identities=24%  Similarity=0.488  Sum_probs=69.1

Q ss_pred             hccCccccceecccCceEEEEEEeCC---------------CcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeee
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLTD---------------GRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKL  201 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~~---------------~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l  201 (221)
                      +.++|.+.+.||+|+||.||.+....               ...+|+|.++.. .......|.+|+.+|++++||||+++
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~   82 (295)
T cd05097           3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRL   82 (295)
T ss_pred             chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence            34567888999999999999886421               235899988653 33445679999999999999999999


Q ss_pred             eeEEEeCCeeEEEEEcccCC
Q 036177          202 LGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       202 ~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ++.+...+..+++|||+++|
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~  102 (295)
T cd05097          83 LGVCVSDDPLCMITEYMENG  102 (295)
T ss_pred             EEEEcCCCccEEEEecCCCC
Confidence            99999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.25  E-value=4.3e-11  Score=91.63  Aligned_cols=75  Identities=31%  Similarity=0.415  Sum_probs=62.9

Q ss_pred             eecccCceEEEEEEeCC---CcEEEEEeccCCC-cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          147 IIGQGGQGTVFKGMLTD---GRIVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       147 ~lg~G~fg~v~~~~~~~---~~~vavk~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .||+|+||.||+|.+.+   +..+++|.++... ......|.+|+.++++++||||++++|.+......+++|||+++|
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            58999999999998533   3568999886532 334457999999999999999999999998888899999999876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.25  E-value=4.9e-11  Score=92.00  Aligned_cols=82  Identities=30%  Similarity=0.487  Sum_probs=68.5

Q ss_pred             cCccccceecccCceEEEEEEeC-----CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--CeeE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-----DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPL  212 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-----~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~  212 (221)
                      .++++.+.||+|+||.||++.+.     .+..+++|.++.......+.|.+|+.+++.++||||+++.+++...  ...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            35667889999999999999742     4678999998776666667899999999999999999999987543  4678


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +++||+++|
T Consensus        84 lv~e~~~~~   92 (284)
T cd05081          84 LVMEYLPYG   92 (284)
T ss_pred             EEEEecCCC
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.25  E-value=3.5e-11  Score=94.71  Aligned_cols=76  Identities=21%  Similarity=0.271  Sum_probs=65.1

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +.||+|+||.||++.. .++..+|+|.++..   .......+++|+.+|++++||||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            3689999999999984 56889999988642   2334567889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.24  E-value=4.3e-11  Score=91.17  Aligned_cols=85  Identities=27%  Similarity=0.431  Sum_probs=71.9

Q ss_pred             hhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      |++..+++.+.+.||+|+||.||++....+..+++|.+.... .....|.+|+.++++++|+||+++.+.... ...+++
T Consensus         1 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v   78 (260)
T cd05073           1 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYII   78 (260)
T ss_pred             CcccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEE
Confidence            355677888999999999999999997677789999876532 235679999999999999999999998876 678999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        79 ~e~~~~~   85 (260)
T cd05073          79 TEFMAKG   85 (260)
T ss_pred             EEeCCCC
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.24  E-value=5.1e-11  Score=94.12  Aligned_cols=82  Identities=21%  Similarity=0.336  Sum_probs=69.0

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||.||++.. ..+..+|+|.+..   ........+.+|..++..++|+||+.+.+.+...+..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            3577789999999999999985 4578899998754   22233456889999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        81 Ey~~gg   86 (331)
T cd05624          81 DYYVGG   86 (331)
T ss_pred             eCCCCC
Confidence            999876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.24  E-value=2.5e-11  Score=93.33  Aligned_cols=83  Identities=33%  Similarity=0.610  Sum_probs=70.0

Q ss_pred             ccCccccceecccCceEEEEEEeCC------CcEEEEEeccCCCcc-cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTD------GRIVAVKKSKSVHES-NVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~------~~~vavk~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      .++|.+.+.||+|+||.||++...+      +..+|+|.++..... ....|.+|+.+|.+++||||+++++.+......
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   83 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP   83 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence            3457778899999999999997532      467999998764333 457899999999999999999999999999999


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      +++|||+++|
T Consensus        84 ~lv~e~~~~~   93 (280)
T cd05049          84 IMVFEYMEHG   93 (280)
T ss_pred             EEEEecCCCC
Confidence            9999999865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.24  E-value=4.5e-11  Score=94.30  Aligned_cols=76  Identities=21%  Similarity=0.294  Sum_probs=65.3

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +.||+|+||.||++.. .++..+|+|.+...   .......+.+|+.+|+.++||||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            3689999999999984 46889999988642   3344567899999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.24  E-value=5.3e-11  Score=95.05  Aligned_cols=81  Identities=25%  Similarity=0.342  Sum_probs=69.2

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|...+.||+|+||.||++.. ..+..+|+|.++..   .......+.+|..++..++||||+++++.+...+..++|||
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E   81 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME   81 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            567788999999999999985 45889999988642   23345678899999999999999999999998999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~gg   86 (360)
T cd05627          82 FLPGG   86 (360)
T ss_pred             CCCCc
Confidence            99876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.24  E-value=3.8e-11  Score=91.61  Aligned_cols=84  Identities=25%  Similarity=0.415  Sum_probs=69.3

Q ss_pred             hhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      .++.++|.+.+.||+|+||.||++...+...|++|.++.... ..+.|.+|+.++..++||||+++++... ....+++|
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~   79 (262)
T cd05071           2 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVT   79 (262)
T ss_pred             CCChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEE
Confidence            345567888999999999999999876666799999875332 3467999999999999999999998764 45679999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        80 e~~~~~   85 (262)
T cd05071          80 EYMSKG   85 (262)
T ss_pred             EcCCCC
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.24  E-value=3.7e-11  Score=96.36  Aligned_cols=89  Identities=25%  Similarity=0.373  Sum_probs=73.9

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      .++....++|...+.||+|+||.||++.. ..+..+|+|.+..   ........+.+|..+++.++||||+++++.+...
T Consensus        36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~  115 (371)
T cd05622          36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  115 (371)
T ss_pred             hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence            34455667889999999999999999985 4578899998753   2223345688999999999999999999999999


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      +..++||||+++|
T Consensus       116 ~~~~lv~Ey~~gg  128 (371)
T cd05622         116 RYLYMVMEYMPGG  128 (371)
T ss_pred             CEEEEEEcCCCCC
Confidence            9999999999876

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.23  E-value=3.5e-11  Score=91.82  Aligned_cols=84  Identities=30%  Similarity=0.527  Sum_probs=71.2

Q ss_pred             hhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      +...++...+.||+|+||.||++.+ ..+..+++|.+... .....+|.+|+.++..++||||+++++.+...+..+++|
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (263)
T cd05052           3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   81 (263)
T ss_pred             CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence            3445677788999999999999985 35788999988653 334567999999999999999999999999888999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        82 e~~~~~   87 (263)
T cd05052          82 EFMTYG   87 (263)
T ss_pred             EeCCCC
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.23  E-value=5.5e-11  Score=90.56  Aligned_cols=84  Identities=26%  Similarity=0.428  Sum_probs=69.9

Q ss_pred             hhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      +++.+++.+.+.||+|+||.||++....+..+++|.++.... ....|.+|+.++++++|||++++++... .+..+++|
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~   79 (260)
T cd05070           2 EIPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVT   79 (260)
T ss_pred             CCchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEE
Confidence            345567788899999999999999987788899998875333 3467999999999999999999998864 45679999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        80 e~~~~~   85 (260)
T cd05070          80 EYMSKG   85 (260)
T ss_pred             EecCCC
Confidence            999865

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.23  E-value=6.2e-11  Score=98.13  Aligned_cols=80  Identities=20%  Similarity=0.244  Sum_probs=68.8

Q ss_pred             ccccceecccCceEEEEEEe-CC-CcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~-~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      |.+.+.||+|+||.||.+.. .+ +..|++|.+..........+.+|+.+|+.++||||+++++.+...+..+|||||++
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~  148 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS  148 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence            77788999999999999974 33 56788887755555555678899999999999999999999999999999999998


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus       149 gg  150 (478)
T PTZ00267        149 GG  150 (478)
T ss_pred             CC
Confidence            76

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.23  E-value=4.3e-11  Score=91.45  Aligned_cols=83  Identities=23%  Similarity=0.436  Sum_probs=71.5

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      .++|...+.||+|+||.||++.. .++..+++|.++.........+.+|+.+++.++||||+++++.....+..++++||
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            34677788999999999999984 46888999988765545556788999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        88 ~~~~   91 (267)
T cd06645          88 CGGG   91 (267)
T ss_pred             cCCC
Confidence            9865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.23  E-value=7.5e-11  Score=91.71  Aligned_cols=83  Identities=28%  Similarity=0.478  Sum_probs=72.3

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ..+|...+.||+|+||.||++.. .++..+|+|.+........+.+.+|+.+++.++||||+++++.+...+..++|+||
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   97 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   97 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence            35677788999999999999984 57889999988765555567789999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        98 ~~~~  101 (297)
T cd06656          98 LAGG  101 (297)
T ss_pred             cCCC
Confidence            9875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.23  E-value=5.9e-11  Score=103.02  Aligned_cols=82  Identities=24%  Similarity=0.414  Sum_probs=70.2

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||.||++.. ..+..||+|.++..   .....+.|.+|+.++++++||||+++++++...+..+++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            3577788999999999999985 35889999998642   2223467999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        82 EY~eGG   87 (932)
T PRK13184         82 PYIEGY   87 (932)
T ss_pred             EcCCCC
Confidence            999876

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.23  E-value=4.9e-11  Score=91.57  Aligned_cols=86  Identities=28%  Similarity=0.476  Sum_probs=71.5

Q ss_pred             hhhccCccccceecccCceEEEEEEeCC------CcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTD------GRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~------~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      ++..++|.+.+.||+|+||.||++....      +..+++|.+... .......|.+|+.+|+.++||||+++++++...
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   81 (277)
T cd05032           2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG   81 (277)
T ss_pred             ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence            4456678888999999999999998532      357999998653 234456799999999999999999999999999


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      ...+++|||+++|
T Consensus        82 ~~~~~v~e~~~~~   94 (277)
T cd05032          82 QPTLVVMELMAKG   94 (277)
T ss_pred             CCcEEEEecCCCC
Confidence            9999999999865

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.22  E-value=3.8e-11  Score=92.81  Aligned_cols=84  Identities=32%  Similarity=0.502  Sum_probs=70.4

Q ss_pred             hccCccccceecccCceEEEEEEeC------CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      +.++|+....||+|+||.||++...      .+..+|+|.+... .......|.+|+.++++++||||+++++.+.....
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~   82 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP   82 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence            4466788899999999999999852      3567999988653 33445679999999999999999999999988889


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++++||+++|
T Consensus        83 ~~lv~e~~~~~   93 (288)
T cd05050          83 MCLLFEYMAYG   93 (288)
T ss_pred             cEEEEecCCCC
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.22  E-value=5e-11  Score=93.37  Aligned_cols=74  Identities=32%  Similarity=0.388  Sum_probs=63.7

Q ss_pred             ecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          148 IGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       148 lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ||+|+||.||++.. .++..+|+|.++.   ........+.+|+.+|.+++||||+++++.+...+..+++|||+++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   78 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGG   78 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCC
Confidence            69999999999985 4578899998864   23344567899999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.22  E-value=5.2e-11  Score=91.60  Aligned_cols=84  Identities=30%  Similarity=0.561  Sum_probs=70.2

Q ss_pred             hccCccccceecccCceEEEEEEeCC------CcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLTD------GRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~~------~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ..++|.+.+.||+|+||.||++....      +..|++|..... .......|.+|+.++++++|+||+++++.+...+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            34668888999999999999998643      467899987653 33345679999999999999999999999988888


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+++|||+++|
T Consensus        84 ~~lv~e~~~g~   94 (277)
T cd05036          84 RFILLELMAGG   94 (277)
T ss_pred             cEEEEecCCCC
Confidence            99999999865

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.22  E-value=2.3e-11  Score=103.06  Aligned_cols=88  Identities=30%  Similarity=0.510  Sum_probs=77.5

Q ss_pred             hhhhhccCccccceecccCceEEEEEEeC----C----CcEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeeee
Q 036177          134 DLEKATDNYKVSRIIGQGGQGTVFKGMLT----D----GRIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLG  203 (221)
Q Consensus       134 ~~~~~~~~~~~~~~lg~G~fg~v~~~~~~----~----~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~g  203 (221)
                      .|+++++++.+.+.+|+|.||+|++|.+.    .    ...||||.++. ....+.+.+..|+++|..+ +||||+.++|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            68888898888899999999999999742    1    34699999886 4556778999999999999 7999999999


Q ss_pred             EEEeCCeeEEEEEcccCC
Q 036177          204 CCLETEVPLLVYEFILNG  221 (221)
Q Consensus       204 ~~~~~~~~~lv~e~~~~G  221 (221)
                      +|..+++.++|+||+.+|
T Consensus       370 ~~t~~~~~~~v~Ey~~~G  387 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHG  387 (609)
T ss_pred             eeccCCceEEEEEeccCC
Confidence            999999999999999987

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.22  E-value=1.1e-10  Score=90.64  Aligned_cols=83  Identities=28%  Similarity=0.483  Sum_probs=72.0

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ..+|...+.||+|+||.||++.. .++..+++|.+..........+.+|+.+++.++||||+++++.+......++|+||
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~   98 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence            35677788999999999999984 56889999988765555567799999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        99 ~~~~  102 (296)
T cd06654          99 LAGG  102 (296)
T ss_pred             cCCC
Confidence            9875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.22  E-value=8.5e-11  Score=91.88  Aligned_cols=81  Identities=28%  Similarity=0.407  Sum_probs=68.1

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|...+.||+|+||.||++.. ..+..+|+|.++.. .......+.+|+.++++++||||+++++.+...+..+++|||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            4577788999999999999985 35778999988642 233345688999999999999999999999999999999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus        86 ~~~   88 (309)
T cd07872          86 LDK   88 (309)
T ss_pred             CCC
Confidence            864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.22  E-value=3.9e-11  Score=95.36  Aligned_cols=81  Identities=25%  Similarity=0.381  Sum_probs=69.7

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|.+.+.||+|+||.||++.. .++..+|+|.++..   .......+.+|+.+|..++||||+++++.+...+..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME   81 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence            567788999999999999995 36889999988642   22445678999999999999999999999998999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~~~   86 (350)
T cd05573          82 YMPGG   86 (350)
T ss_pred             CCCCC
Confidence            99875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.22  E-value=1.1e-10  Score=89.01  Aligned_cols=80  Identities=31%  Similarity=0.635  Sum_probs=67.9

Q ss_pred             ccccceecccCceEEEEEEeCCCcEEEEEeccCCC------cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVH------ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++..+.||+|+||.||++...++..+|+|.++...      ......+.+|+.++++++|+||+++++.+...+..++++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            45678899999999999987788899999876422      122356889999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        82 e~~~~~   87 (265)
T cd06631          82 EFVPGG   87 (265)
T ss_pred             ecCCCC
Confidence            999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.22  E-value=7.2e-11  Score=94.02  Aligned_cols=84  Identities=25%  Similarity=0.375  Sum_probs=69.6

Q ss_pred             hccCccccceecccCceEEEEEE-eCCCcEEEEEeccCC----Cc-ccHHHHHHHHHHHHcCC-CCceeeeeeEEEeCCe
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSV----HE-SNVEQFINEVVILSQIN-HRNVVKLLGCCLETEV  210 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~  210 (221)
                      ..+.+.+.+.||+|+||.|+.+. ...+..||+|.+...    .. ...+...+|+.+|+.++ ||||+++..+......
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            34567889999999999999997 456899999976542    11 22345668999999998 9999999999999889


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++||||+.+|
T Consensus        95 ~~ivmEy~~gG  105 (370)
T KOG0583|consen   95 IYIVMEYCSGG  105 (370)
T ss_pred             EEEEEEecCCc
Confidence            99999999886

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.21  E-value=1.1e-10  Score=89.05  Aligned_cols=82  Identities=32%  Similarity=0.550  Sum_probs=70.7

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|++.+.||+|+||.||++... ++..+++|.++.   ........+.+|++++++++|+||+++++.+...+..+++|
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            46778899999999999999964 788999998753   23334567999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        82 e~~~~~   87 (267)
T cd08224          82 ELADAG   87 (267)
T ss_pred             ecCCCC
Confidence            999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.21  E-value=6.3e-11  Score=89.77  Aligned_cols=76  Identities=36%  Similarity=0.616  Sum_probs=65.0

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +.||+|+||.||++.. .++..+|+|.... ........|.+|+.++++++||||+++++++......++++||+++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG   78 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence            3689999999999985 4688899998764 33344567999999999999999999999999888999999999865

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.21  E-value=5.5e-11  Score=92.38  Aligned_cols=84  Identities=23%  Similarity=0.453  Sum_probs=69.6

Q ss_pred             hccCccccceecccCceEEEEEEeC-----------------CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCcee
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLT-----------------DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVV  199 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~-----------------~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv  199 (221)
                      +.++|++.+.||+|+||.||.+...                 +...+|+|.++.. .......|.+|+.+|++++||||+
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   82 (296)
T cd05095           3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNII   82 (296)
T ss_pred             ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcc
Confidence            4567888999999999999987532                 2346899988753 334456899999999999999999


Q ss_pred             eeeeEEEeCCeeEEEEEcccCC
Q 036177          200 KLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       200 ~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ++++.+...+..+++|||+++|
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~  104 (296)
T cd05095          83 RLLAVCITSDPLCMITEYMENG  104 (296)
T ss_pred             eEEEEEecCCccEEEEEeCCCC
Confidence            9999999889999999999865

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.21  E-value=1.2e-10  Score=88.53  Aligned_cols=83  Identities=28%  Similarity=0.467  Sum_probs=72.3

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      .++|...+.||+|+||.||++.. ..+..+++|.+..........+.+|+.++++++||||+++++.....+..+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            46678889999999999999985 45778999988765555678899999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        82 ~~~~   85 (262)
T cd06613          82 CGGG   85 (262)
T ss_pred             CCCC
Confidence            8764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.21  E-value=7.9e-11  Score=91.98  Aligned_cols=88  Identities=27%  Similarity=0.445  Sum_probs=72.2

Q ss_pred             hhhhhccCccccceecccCceEEEEEEeC--------CCcEEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeeeee
Q 036177          134 DLEKATDNYKVSRIIGQGGQGTVFKGMLT--------DGRIVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKLLG  203 (221)
Q Consensus       134 ~~~~~~~~~~~~~~lg~G~fg~v~~~~~~--------~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g  203 (221)
                      .++...++|.+.+.||+|+||.||.+...        ....+|+|.++.. .......+.+|+.++..+ +||||+++++
T Consensus        12 ~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~   91 (307)
T cd05098          12 RWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLG   91 (307)
T ss_pred             cceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence            34555677888999999999999998742        2346999988753 334456789999999999 8999999999


Q ss_pred             EEEeCCeeEEEEEcccCC
Q 036177          204 CCLETEVPLLVYEFILNG  221 (221)
Q Consensus       204 ~~~~~~~~~lv~e~~~~G  221 (221)
                      .+...+..++++||+++|
T Consensus        92 ~~~~~~~~~lv~e~~~~~  109 (307)
T cd05098          92 ACTQDGPLYVIVEYASKG  109 (307)
T ss_pred             EEecCCceEEEEecCCCC
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.21  E-value=6.5e-11  Score=93.40  Aligned_cols=81  Identities=27%  Similarity=0.301  Sum_probs=69.2

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|.+.+.||+|+||.||++.. .++..+|+|.++..   .......+.+|+.+++.++||||+++.+.+...+..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME   81 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence            577788999999999999984 46889999988652   22345668899999999999999999999988889999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~~~   86 (330)
T cd05601          82 YQPGG   86 (330)
T ss_pred             CCCCC
Confidence            99876

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.21  E-value=6.9e-11  Score=91.43  Aligned_cols=83  Identities=30%  Similarity=0.576  Sum_probs=70.5

Q ss_pred             ccCccccceecccCceEEEEEEeC------CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      ..+|.+.+.||+|+||.||++...      ++..+++|.+..........|.+|+.+|++++||||+++.+.+...+..+
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   83 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            456778899999999999999741      23568999887655555678999999999999999999999999989999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +++||+++|
T Consensus        84 lv~e~~~~~   92 (288)
T cd05093          84 MVFEYMKHG   92 (288)
T ss_pred             EEEEcCCCC
Confidence            999999865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.21  E-value=1.6e-11  Score=93.97  Aligned_cols=75  Identities=29%  Similarity=0.454  Sum_probs=58.4

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC-----eeEEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETE-----VPLLVY  215 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~lv~  215 (221)
                      +...+++|+|+||.||+|.+ ..+..||||+.-......    -+|+.+|+.++|||||+|+-++....     .+.+||
T Consensus        26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k----nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl  101 (364)
T KOG0658|consen   26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK----NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL  101 (364)
T ss_pred             EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC----cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence            45578999999999999995 456899999875433221    28999999999999999998775532     234899


Q ss_pred             EcccC
Q 036177          216 EFILN  220 (221)
Q Consensus       216 e~~~~  220 (221)
                      ||||.
T Consensus       102 eymP~  106 (364)
T KOG0658|consen  102 EYMPE  106 (364)
T ss_pred             HhchH
Confidence            99984

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.21  E-value=9.3e-11  Score=92.42  Aligned_cols=78  Identities=22%  Similarity=0.280  Sum_probs=65.3

Q ss_pred             ccceeccc--CceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          144 VSRIIGQG--GQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       144 ~~~~lg~G--~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +.++||+|  +|++||++.. .++..||+|.++..  .....+.+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            35789999  7889999984 56889999998652  2233456778999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (327)
T cd08227          82 AYG   84 (327)
T ss_pred             CCC
Confidence            875

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.20  E-value=6.8e-11  Score=92.19  Aligned_cols=87  Identities=32%  Similarity=0.484  Sum_probs=71.5

Q ss_pred             hhhhccCccccceecccCceEEEEEEe------CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeeeeeEEE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKLLGCCL  206 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~------~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~  206 (221)
                      +....++|...+.||+|+||.||++..      ..+..+|+|.++.. .....+.|.+|+.+++++ +||||+++++.+.
T Consensus        30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  109 (302)
T cd05055          30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT  109 (302)
T ss_pred             ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence            445556788899999999999999973      12447999988653 334456799999999999 8999999999999


Q ss_pred             eCCeeEEEEEcccCC
Q 036177          207 ETEVPLLVYEFILNG  221 (221)
Q Consensus       207 ~~~~~~lv~e~~~~G  221 (221)
                      ..+..++++||+++|
T Consensus       110 ~~~~~~lv~e~~~~~  124 (302)
T cd05055         110 IGGPILVITEYCCYG  124 (302)
T ss_pred             cCCceEEEEEcCCCC
Confidence            999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.20  E-value=3.8e-11  Score=92.73  Aligned_cols=81  Identities=25%  Similarity=0.395  Sum_probs=69.9

Q ss_pred             CccccceecccCceEEEEEEeC-CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +|++.+.||+|+||.||++... .+..+|+|.++. ........+.+|+.++.+++||||+++++.+...+..++++||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            4667889999999999999864 688999998764 33444568999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (286)
T cd06622          82 DAG   84 (286)
T ss_pred             CCC
Confidence            875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.20  E-value=1.5e-10  Score=89.07  Aligned_cols=80  Identities=29%  Similarity=0.470  Sum_probs=67.8

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      |+..+.||+|+||.||++.. .++..+|+|..... .......|.+|+.++.+++||||+++++.+...+..++|+||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            45577899999999999985 46788999987542 23345679999999999999999999999999999999999998


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus        86 ~~   87 (277)
T cd06641          86 GG   87 (277)
T ss_pred             CC
Confidence            65

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.20  E-value=7.6e-11  Score=91.34  Aligned_cols=88  Identities=27%  Similarity=0.511  Sum_probs=73.3

Q ss_pred             hhhhhccCccccceecccCceEEEEEEeCC------CcEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeeeeEE
Q 036177          134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTD------GRIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCC  205 (221)
Q Consensus       134 ~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~------~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~  205 (221)
                      ++....++|+..+.||+|+||.||++....      ...+++|.++. ........+.+|+.++.++ +||||+++++++
T Consensus         6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~   85 (293)
T cd05053           6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC   85 (293)
T ss_pred             ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            456677788889999999999999998532      35789998875 3334456799999999999 899999999999


Q ss_pred             EeCCeeEEEEEcccCC
Q 036177          206 LETEVPLLVYEFILNG  221 (221)
Q Consensus       206 ~~~~~~~lv~e~~~~G  221 (221)
                      ...+..+++|||+++|
T Consensus        86 ~~~~~~~li~e~~~~~  101 (293)
T cd05053          86 TQEGPLYVVVEYAAHG  101 (293)
T ss_pred             cCCCCeEEEEEeCCCC
Confidence            9989999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.20  E-value=9.2e-11  Score=90.01  Aligned_cols=83  Identities=28%  Similarity=0.477  Sum_probs=69.2

Q ss_pred             ccCccccceecccCceEEEEEEeC------CCcEEEEEeccCCCcc-cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSVHES-NVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      .++|.....||+|+||.||++...      ....+++|.+...... ....|.+|+.++++++||||+++++.+...+..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   83 (275)
T cd05046           4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH   83 (275)
T ss_pred             hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence            356777889999999999999853      2356899987654333 456799999999999999999999999888889


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      +++|||+++|
T Consensus        84 ~lv~e~~~~~   93 (275)
T cd05046          84 YMILEYTDLG   93 (275)
T ss_pred             eEEEEecCCC
Confidence            9999999865

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.20  E-value=8.9e-11  Score=89.65  Aligned_cols=75  Identities=24%  Similarity=0.472  Sum_probs=63.1

Q ss_pred             eecccCceEEEEEEeCC-------------CcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          147 IIGQGGQGTVFKGMLTD-------------GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       147 ~lg~G~fg~v~~~~~~~-------------~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      .||+|+||.||+|.+..             ...|++|.+..........|.+|+.+++.++||||+++++++......++
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l   81 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM   81 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence            68999999999998522             22588888776555556689999999999999999999999998888999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      +|||+++|
T Consensus        82 v~e~~~~~   89 (262)
T cd05077          82 VEEFVEFG   89 (262)
T ss_pred             EEecccCC
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.19  E-value=1e-10  Score=91.90  Aligned_cols=76  Identities=28%  Similarity=0.361  Sum_probs=63.7

Q ss_pred             ceecccCceEEEEEEe----CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          146 RIIGQGGQGTVFKGML----TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~----~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      +.||+|+||.||++..    ..+..+|+|.++..  .......+.+|+.+|++++||||+++++.+...+..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999998863    35788999988642  22334567889999999999999999999999999999999998


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus        82 ~~   83 (318)
T cd05582          82 GG   83 (318)
T ss_pred             CC
Confidence            75

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.19  E-value=1e-10  Score=92.09  Aligned_cols=76  Identities=22%  Similarity=0.270  Sum_probs=64.7

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +.||+|+||.||++.. ..+..+|+|.++..   .......+.+|+.++..++||||+++.+.+...+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            3689999999999984 56889999988642   2334567889999999999999999999999999999999999876

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.19  E-value=7.4e-11  Score=90.27  Aligned_cols=81  Identities=33%  Similarity=0.552  Sum_probs=68.2

Q ss_pred             CccccceecccCceEEEEEEeCC-C---cEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLTD-G---RIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~~-~---~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      .+.+.+.||+|+||.||++.... +   ..+++|.+... .......|..|+.+++.++||||+++.+.+....+.+++|
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            45668899999999999998532 3   36999988653 4445678999999999999999999999998888999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        85 e~~~~~   90 (269)
T cd05065          85 EFMENG   90 (269)
T ss_pred             ecCCCC
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.19  E-value=7.2e-11  Score=92.60  Aligned_cols=81  Identities=26%  Similarity=0.593  Sum_probs=66.1

Q ss_pred             cCccccceecccCceEEEEEEeC-CCc----EEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGR----IVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~----~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      .+|+..+.||+|+||.||+|.+. ++.    .||+|.++.. .....++|.+|+.+++.++||||++++|.+... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            45777899999999999999853 333    3899998753 334457899999999999999999999998765 4679


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ++||+++|
T Consensus        86 v~e~~~~g   93 (316)
T cd05108          86 ITQLMPFG   93 (316)
T ss_pred             eeecCCCC
Confidence            99999876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.19  E-value=9.8e-11  Score=90.26  Aligned_cols=80  Identities=28%  Similarity=0.466  Sum_probs=69.0

Q ss_pred             ccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      |+..+.||+|+||.||++... .+..+++|.+..........|.+|+.+++.++||||+++++.+...+..++++||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            455678999999999999864 4677899988665555667899999999999999999999999999999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        87 ~   87 (282)
T cd06643          87 G   87 (282)
T ss_pred             C
Confidence            5

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.19  E-value=9.9e-11  Score=89.58  Aligned_cols=75  Identities=35%  Similarity=0.458  Sum_probs=62.1

Q ss_pred             eecccCceEEEEEEeCC---CcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          147 IIGQGGQGTVFKGMLTD---GRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       147 ~lg~G~fg~v~~~~~~~---~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .||+|+||.||+|...+   ...+++|.+.. ........|++|+.+++.++||||+++++.+......+++|||+++|
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            58999999999997433   34688887754 23334567899999999999999999999999889999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.19  E-value=1.1e-10  Score=88.73  Aligned_cols=80  Identities=26%  Similarity=0.454  Sum_probs=68.2

Q ss_pred             CccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      ++.+.+.||+|+||.||++.+..+..+++|.+..... ....|.+|+.+++.++||||+++++.+...+..++++||+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            4667889999999999999876677899998764332 345789999999999999999999999888899999999986


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        84 ~   84 (256)
T cd05059          84 G   84 (256)
T ss_pred             C
Confidence            5

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.19  E-value=1.2e-10  Score=90.42  Aligned_cols=82  Identities=29%  Similarity=0.503  Sum_probs=71.0

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      ++|...+.||+|+||.||++.. .++..+++|.+........+.+.+|+.++++++||||+++.+.+...+..++|+||+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            5677788999999999999984 467889999886544445677999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        99 ~~~  101 (293)
T cd06647          99 AGG  101 (293)
T ss_pred             CCC
Confidence            875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.19  E-value=7.9e-11  Score=90.76  Aligned_cols=82  Identities=29%  Similarity=0.554  Sum_probs=68.5

Q ss_pred             cCccccceecccCceEEEEEEeCC-C-----cEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTD-G-----RIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~-~-----~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      ++|++.+.||+|+||.||++.... +     ..+++|.++.. .......|.+|+.++.+++||||+++++.+......+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            457778999999999999998522 2     46899988653 3334567999999999999999999999999888999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      ++|||+++|
T Consensus        85 ~~~e~~~~~   93 (283)
T cd05048          85 MLFEYLAHG   93 (283)
T ss_pred             EEEecCCCC
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.19  E-value=1e-10  Score=90.21  Aligned_cols=74  Identities=26%  Similarity=0.335  Sum_probs=62.4

Q ss_pred             ecccCceEEEEEEe-CCCcEEEEEeccCCC---cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          148 IGQGGQGTVFKGML-TDGRIVAVKKSKSVH---ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       148 lg~G~fg~v~~~~~-~~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ||+|+||.||++.. .++..+|+|.+....   ....+.+..|+.+|+.++||||+++.+++......+++|||+++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g   78 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGG   78 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCC
Confidence            68999999999984 468899999875422   223456789999999999999999999998888999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.19  E-value=1.3e-10  Score=91.82  Aligned_cols=79  Identities=28%  Similarity=0.510  Sum_probs=64.6

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC-----eeEE
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETE-----VPLL  213 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~l  213 (221)
                      |.+.+.||+|+||.||++.. .++..||+|.++..  .......+.+|+.+|++++||||+++.+++....     ..++
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            56678999999999999984 46889999988642  2334457899999999999999999999876432     4799


Q ss_pred             EEEcccC
Q 036177          214 VYEFILN  220 (221)
Q Consensus       214 v~e~~~~  220 (221)
                      +|||+.+
T Consensus        82 v~e~~~~   88 (338)
T cd07859          82 VFELMES   88 (338)
T ss_pred             EEecCCC
Confidence            9999964

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.19  E-value=1.2e-10  Score=89.00  Aligned_cols=82  Identities=30%  Similarity=0.591  Sum_probs=68.7

Q ss_pred             cCccccceecccCceEEEEEEeC-CC---cEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DG---RIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~---~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      ++|+..+.||+|+||.||++... ++   ..+++|.++.. .......|.+|+.++++++||||+++.+.+...+..+++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            45677889999999999999864 23   36899988653 334456799999999999999999999999998999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        85 ~e~~~~~   91 (268)
T cd05063          85 TEYMENG   91 (268)
T ss_pred             EEcCCCC
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.18  E-value=1.1e-10  Score=89.89  Aligned_cols=84  Identities=30%  Similarity=0.573  Sum_probs=69.9

Q ss_pred             hccCccccceecccCceEEEEEEeCC-----CcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe-CCe
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLTD-----GRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLE-TEV  210 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~~-----~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~  210 (221)
                      ..++|.+.+.||+|+||.||+|....     +..|++|.+.. ........+.+|+.+|++++||||+++++.+.. ...
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            45678888999999999999999654     67899998865 344446779999999999999999999998876 467


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++++||+++|
T Consensus        84 ~~~~~~~~~~~   94 (280)
T cd05043          84 PFVLYPYMNWG   94 (280)
T ss_pred             CEEEEEcCCCC
Confidence            89999998864

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.18  E-value=1.2e-10  Score=91.73  Aligned_cols=76  Identities=26%  Similarity=0.441  Sum_probs=63.7

Q ss_pred             ceecccCceEEEEEEe----CCCcEEEEEeccCC----CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          146 RIIGQGGQGTVFKGML----TDGRIVAVKKSKSV----HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~----~~~~~vavk~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      +.||+|+||.||++..    ..+..+|+|.++..    .......+.+|+.+|+.++||||+++++.+...+..+++|||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5799999999999974    34778999988642    223345678999999999999999999999998999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        82 ~~~~   85 (323)
T cd05584          82 LSGG   85 (323)
T ss_pred             CCCc
Confidence            9875

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.18  E-value=1.2e-10  Score=91.87  Aligned_cols=76  Identities=28%  Similarity=0.413  Sum_probs=64.3

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++.. .++..+|+|.++..   .......+.+|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            3689999999999985 46789999998652   233445688999999998 799999999999999999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 g   81 (329)
T cd05588          81 G   81 (329)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.18  E-value=1.4e-10  Score=89.76  Aligned_cols=80  Identities=31%  Similarity=0.486  Sum_probs=66.4

Q ss_pred             ccccceecccCceEEEEEEeC------CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      |.+.+.||+|+||.||+|...      ....+++|.+... .......+.+|+.+++.++||||+++++.+...+..+++
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            566789999999999999842      2246888887653 334456799999999999999999999999998999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      +||+++|
T Consensus        82 ~e~~~~~   88 (290)
T cd05045          82 VEYAKYG   88 (290)
T ss_pred             EEecCCC
Confidence            9999865

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.18  E-value=1.4e-10  Score=91.56  Aligned_cols=81  Identities=19%  Similarity=0.325  Sum_probs=68.0

Q ss_pred             CccccceecccCceEEEEEEeC-CCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|.+.+.||+|+||.||++... .+..+|+|.+..   ........|.+|..++..++|+||+++.+.+...+..++|||
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD   81 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence            5777889999999999999864 467899998753   222334558899999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 y~~~g   86 (332)
T cd05623          82 YYVGG   86 (332)
T ss_pred             ccCCC
Confidence            99876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.18  E-value=2e-10  Score=89.28  Aligned_cols=84  Identities=29%  Similarity=0.544  Sum_probs=72.5

Q ss_pred             hccCccccceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +..+|...+.||.|.||.||++. ..++..+++|.+........+.+.+|+.+++.++||||+++++.+...+..++++|
T Consensus        17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   96 (296)
T cd06655          17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME   96 (296)
T ss_pred             CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence            33557788899999999999998 45688999998866555556789999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        97 ~~~~~  101 (296)
T cd06655          97 YLAGG  101 (296)
T ss_pred             ecCCC
Confidence            99875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.18  E-value=9.5e-11  Score=90.30  Aligned_cols=83  Identities=30%  Similarity=0.537  Sum_probs=71.0

Q ss_pred             ccCccccceecccCceEEEEEEe------CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~------~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      ..++.....||+|+||.||++..      .++..+++|.+..........|.+|+.+++.++||||+++++.+...+..+
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL   83 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence            45677788999999999999863      235578999887766666778999999999999999999999998888899


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +++||+++|
T Consensus        84 lv~e~~~~~   92 (280)
T cd05092          84 MVFEYMRHG   92 (280)
T ss_pred             EEEecCCCC
Confidence            999999865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.18  E-value=5e-11  Score=94.38  Aligned_cols=87  Identities=32%  Similarity=0.468  Sum_probs=70.4

Q ss_pred             hhhhccCccccceecccCceEEEEEEeC------CCcEEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeeeeeEEE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKLLGCCL  206 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~  206 (221)
                      |..+.++|++.+.||+|+||.||++...      .++.||+|.++.. .......+.+|+.++.++ +||||+++++.+.
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~   81 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT   81 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence            5667788999999999999999999631      2468999988753 233345788999999999 8999999999886


Q ss_pred             eC-CeeEEEEEcccCC
Q 036177          207 ET-EVPLLVYEFILNG  221 (221)
Q Consensus       207 ~~-~~~~lv~e~~~~G  221 (221)
                      .. ...++++||+++|
T Consensus        82 ~~~~~~~~v~ey~~~~   97 (337)
T cd05054          82 KPGGPLMVIVEYCKFG   97 (337)
T ss_pred             cCCCCEEEEEecCCCC
Confidence            54 5678999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.18  E-value=8.4e-11  Score=94.33  Aligned_cols=80  Identities=26%  Similarity=0.341  Sum_probs=66.6

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC-----eeE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETE-----VPL  212 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~  212 (221)
                      +|+..+.||+|+||.||++.. .++..||+|.+...  .......+.+|+.+|+.++||||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            356788999999999999984 56889999988642  2334567899999999999999999999987765     789


Q ss_pred             EEEEcccC
Q 036177          213 LVYEFILN  220 (221)
Q Consensus       213 lv~e~~~~  220 (221)
                      +++||+.+
T Consensus        81 lv~e~~~~   88 (372)
T cd07853          81 VVTELMQS   88 (372)
T ss_pred             EEeecccc
Confidence            99999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.17  E-value=1.6e-10  Score=89.13  Aligned_cols=91  Identities=30%  Similarity=0.440  Sum_probs=73.6

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEe
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLE  207 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  207 (221)
                      +.++.+..+.++|+..+.||+|+||.||++.. ..+..+++|.+.... .....+.+|+.++.++ +||||+++++.+..
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            44566777888999999999999999999985 457889999876422 2235688999999999 79999999998753


Q ss_pred             -----CCeeEEEEEcccCC
Q 036177          208 -----TEVPLLVYEFILNG  221 (221)
Q Consensus       208 -----~~~~~lv~e~~~~G  221 (221)
                           .+..+++|||+++|
T Consensus        87 ~~~~~~~~~~lv~e~~~~~  105 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGG  105 (286)
T ss_pred             cccCCCCeEEEEEeecCCC
Confidence                 34689999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.17  E-value=1.2e-10  Score=91.71  Aligned_cols=80  Identities=24%  Similarity=0.419  Sum_probs=64.1

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHH---HcCCCCceeeeeeEEEeCCeeEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVIL---SQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l---~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      |.+.+.||+|+||.||++.. .++..||+|.++..   .....+.+.+|..++   +.++||||+++++++...+..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            34578899999999999985 45889999998642   223345677776655   567899999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        81 ~E~~~~~   87 (324)
T cd05589          81 MEYAAGG   87 (324)
T ss_pred             EcCCCCC
Confidence            9999875

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.17  E-value=1.6e-10  Score=87.58  Aligned_cols=80  Identities=25%  Similarity=0.451  Sum_probs=69.1

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |...+.||+|+||.||++.. .++..+++|.+..  ........+.+|+.++++++||||+++++.+...+..++++||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA   81 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence            56678899999999999985 4678899998753  34455678999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (256)
T cd08529          82 ENG   84 (256)
T ss_pred             CCC
Confidence            865

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.17  E-value=1.8e-10  Score=89.02  Aligned_cols=80  Identities=25%  Similarity=0.393  Sum_probs=66.5

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      |...+.||+|+||.||++.. .++..+|+|.+...   .......+.+|+.+|..++|+||+++.+.+...+..+++|||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            44567899999999999985 46889999988542   222345678999999999999999999999888999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        82 ~~~~   85 (285)
T cd05632          82 MNGG   85 (285)
T ss_pred             ccCc
Confidence            9865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.17  E-value=1.6e-10  Score=89.46  Aligned_cols=81  Identities=27%  Similarity=0.413  Sum_probs=69.1

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|++.+.||+|+||.||++.. .++..+|+|.++..   .......+.+|+.+|++++||||+++++.....+..+++||
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME   81 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence            567788999999999999985 45789999987542   23345678999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~~~   86 (290)
T cd05580          82 YVPGG   86 (290)
T ss_pred             cCCCC
Confidence            99765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.17  E-value=2.3e-10  Score=88.50  Aligned_cols=80  Identities=28%  Similarity=0.409  Sum_probs=66.4

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCCC---cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH---ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      |+..+.||+|+||.||++.. ..+..+|+|.+....   ......+.+|+.+++.++|+|++++.+.+...+..+++|||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            45567899999999999985 467899999875421   22234578999999999999999999999998999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        82 ~~g~   85 (285)
T cd05630          82 MNGG   85 (285)
T ss_pred             cCCC
Confidence            9875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.17  E-value=2.1e-11  Score=85.12  Aligned_cols=78  Identities=31%  Similarity=0.459  Sum_probs=66.2

Q ss_pred             ccccceecccCceEEEEEE-eCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +...++||+|.||+||+++ +..+..||+|..+-  .++.-....++|+.+|+.++|.|||+++.+..+...+-+|+||+
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c   83 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence            3345789999999999998 55688999998653  44455567899999999999999999999999999999999997


Q ss_pred             c
Q 036177          219 L  219 (221)
Q Consensus       219 ~  219 (221)
                      .
T Consensus        84 d   84 (292)
T KOG0662|consen   84 D   84 (292)
T ss_pred             h
Confidence            4

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.17  E-value=1.9e-10  Score=89.51  Aligned_cols=81  Identities=27%  Similarity=0.395  Sum_probs=68.1

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|...+.||+|+||.||++.. ..+..||+|.++. ........+.+|+.++++++||||+++++++...+..++++||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            4567788999999999999985 3578899998864 2333345688999999999999999999999999999999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus        86 ~~~   88 (301)
T cd07873          86 LDK   88 (301)
T ss_pred             ccc
Confidence            864

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.17  E-value=8.8e-11  Score=94.37  Aligned_cols=76  Identities=32%  Similarity=0.410  Sum_probs=66.7

Q ss_pred             cceecccCceEEEEEE-eCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          145 SRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      .++||+|.||+||-|. -+.|+.||||.+..  .+......+++|+.+|.+++||.||.|.-++...+..++|||-+.+
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence            6789999999999998 56799999999865  3344457799999999999999999999999999999999998754

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.17  E-value=2.2e-10  Score=86.90  Aligned_cols=81  Identities=31%  Similarity=0.535  Sum_probs=69.3

Q ss_pred             cCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      .++...+.||+|+||.||++.+.++..+++|.+..... ....|.+|+.++++++|||++++++.+......++++||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            35667889999999999999876678899998865332 34579999999999999999999999988889999999998


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus        83 ~~   84 (256)
T cd05112          83 HG   84 (256)
T ss_pred             CC
Confidence            65

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.17  E-value=2.5e-10  Score=86.65  Aligned_cols=80  Identities=25%  Similarity=0.400  Sum_probs=68.5

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |+..+.||.|+||.||.+.. .++..+++|.+..  .+......+.+|+.++++++|+||+++++.+...+.++++|||+
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~   81 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA   81 (256)
T ss_pred             ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence            56688999999999988873 4688899998754  33455677999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (256)
T cd08221          82 NGG   84 (256)
T ss_pred             CCC
Confidence            875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.17  E-value=1.3e-10  Score=90.97  Aligned_cols=88  Identities=25%  Similarity=0.456  Sum_probs=71.7

Q ss_pred             hhhhhccCccccceecccCceEEEEEEeC--------CCcEEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeeeee
Q 036177          134 DLEKATDNYKVSRIIGQGGQGTVFKGMLT--------DGRIVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKLLG  203 (221)
Q Consensus       134 ~~~~~~~~~~~~~~lg~G~fg~v~~~~~~--------~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g  203 (221)
                      .|..+.++|.+.+.||+|+||.||++...        ....+|+|.++.. .......+.+|+.+++.+ +||||+++++
T Consensus         6 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~   85 (314)
T cd05099           6 KWEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLG   85 (314)
T ss_pred             cccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEE
Confidence            34556677888999999999999998631        2346899987752 334456789999999999 6999999999


Q ss_pred             EEEeCCeeEEEEEcccCC
Q 036177          204 CCLETEVPLLVYEFILNG  221 (221)
Q Consensus       204 ~~~~~~~~~lv~e~~~~G  221 (221)
                      ++...+..++++||+++|
T Consensus        86 ~~~~~~~~~lv~e~~~~g  103 (314)
T cd05099          86 VCTQEGPLYVIVEYAAKG  103 (314)
T ss_pred             EEccCCceEEEEecCCCC
Confidence            998888899999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.17  E-value=2.4e-10  Score=88.08  Aligned_cols=81  Identities=30%  Similarity=0.404  Sum_probs=68.3

Q ss_pred             CccccceecccCceEEEEEEeC-CCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      +|+..+.||+|+||.||++... ++..+|+|.+...  .....+.+.+|+.+++.++|||++++++.+...+..+++|||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~   81 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY   81 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence            4667889999999999999864 5889999987542  222345688999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      ++++
T Consensus        82 ~~~~   85 (286)
T cd07847          82 CDHT   85 (286)
T ss_pred             cCcc
Confidence            9864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.17  E-value=1.8e-10  Score=87.34  Aligned_cols=80  Identities=29%  Similarity=0.563  Sum_probs=67.6

Q ss_pred             ccccceecccCceEEEEEEeC-CCcEEEEEeccCCC-----cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH-----ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      |+..+.||+|+||.||++... ++..+++|.+....     ....+.+.+|+.++++++||||+++.+.+...+..++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            455688999999999999964 68899999875422     234567999999999999999999999998888999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||++++
T Consensus        82 e~~~~~   87 (258)
T cd06632          82 ELVPGG   87 (258)
T ss_pred             EecCCC
Confidence            999864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.16  E-value=3e-10  Score=86.21  Aligned_cols=80  Identities=25%  Similarity=0.359  Sum_probs=68.4

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      |.+.+.||+|+||.||.+.. ..+..+++|.++. ......+.+.+|+.+++.++||||+++.+.+...+..++++||++
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD   81 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence            56678999999999999984 4678899998753 333455678899999999999999999999999999999999998


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus        82 ~~   83 (255)
T cd08219          82 GG   83 (255)
T ss_pred             CC
Confidence            75

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.16  E-value=2.2e-10  Score=87.26  Aligned_cols=83  Identities=27%  Similarity=0.389  Sum_probs=68.0

Q ss_pred             hhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++.+++.+...||+|+||.||++....+..+++|.+.... ...+.|.+|+.++++++|||++++++... .+..+++||
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e   80 (260)
T cd05069           3 IPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTE   80 (260)
T ss_pred             CChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEE
Confidence            3445677788999999999999998677789999876533 23467899999999999999999998864 456899999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        81 ~~~~~   85 (260)
T cd05069          81 FMGKG   85 (260)
T ss_pred             cCCCC
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.16  E-value=1.6e-10  Score=90.18  Aligned_cols=83  Identities=29%  Similarity=0.547  Sum_probs=67.9

Q ss_pred             ccCccccceecccCceEEEEEEeC-CCc--EEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DGR--IVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~~--~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  213 (221)
                      .++|++.+.||+|+||.||++... ++.  .+++|.++.. .......|.+|+.++.++ +||||+++.+.+...+..++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            356777899999999999999853 343  4577776642 334456789999999999 89999999999998899999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ++||+++|
T Consensus        86 v~e~~~~~   93 (303)
T cd05088          86 AIEYAPHG   93 (303)
T ss_pred             EEEeCCCC
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.16  E-value=2e-10  Score=87.97  Aligned_cols=80  Identities=35%  Similarity=0.683  Sum_probs=64.7

Q ss_pred             ccccceecccCceEEEEEEeCC----CcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe-----
Q 036177          142 YKVSRIIGQGGQGTVFKGMLTD----GRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV-----  210 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~~----~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~-----  210 (221)
                      |++.+.||+|+||.||++....    +..+|+|.++.  ........+.+|+..++.++||||+++++.+...+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            3567889999999999998532    36799998864  233445689999999999999999999998876543     


Q ss_pred             -eEEEEEcccCC
Q 036177          211 -PLLVYEFILNG  221 (221)
Q Consensus       211 -~~lv~e~~~~G  221 (221)
                       .++++||+++|
T Consensus        81 ~~~~v~e~~~~~   92 (273)
T cd05035          81 KPMVILPFMKHG   92 (273)
T ss_pred             ccEEEEeccCCC
Confidence             78999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.15  E-value=1.4e-10  Score=90.51  Aligned_cols=87  Identities=25%  Similarity=0.486  Sum_probs=71.2

Q ss_pred             hhhhccCccccceecccCceEEEEEEe--------CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeeeeE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGML--------TDGRIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGC  204 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~--------~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~  204 (221)
                      +....+++.+.+.||+|+||.||.+..        .++..+++|.++. ........+.+|+.++..+ +||||+++++.
T Consensus        10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   89 (304)
T cd05101          10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA   89 (304)
T ss_pred             ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence            344556778889999999999999973        1234789998864 3344457799999999999 89999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +......+++|||+++|
T Consensus        90 ~~~~~~~~lv~e~~~~~  106 (304)
T cd05101          90 CTQDGPLYVIVEYASKG  106 (304)
T ss_pred             EecCCceEEEEecCCCC
Confidence            99989999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.15  E-value=2.6e-10  Score=87.75  Aligned_cols=81  Identities=28%  Similarity=0.441  Sum_probs=69.0

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      .|+..+.||+|+||.||++.. ..+..+|+|.+... .......|.+|+.++++++||||+++++.+......+++|||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            355577899999999999985 35788999987642 3345677999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        85 ~~~   87 (277)
T cd06640          85 GGG   87 (277)
T ss_pred             CCC
Confidence            875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.15  E-value=3e-10  Score=86.22  Aligned_cols=80  Identities=24%  Similarity=0.348  Sum_probs=68.4

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |+..+.||+|+||.+|.+.. .++..+++|.+..  .......++.+|+.++++++||||+++.+.+...+..++++||+
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC   81 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence            56678999999999999984 4678999998754  23344568999999999999999999999998889999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (256)
T cd08218          82 EGG   84 (256)
T ss_pred             CCC
Confidence            864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.15  E-value=3.5e-10  Score=87.61  Aligned_cols=82  Identities=27%  Similarity=0.403  Sum_probs=68.6

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ..+|...+.||+|+||.||++.. .++..+++|.+... .......+.+|+.+++.++|+||+++.++.......++++|
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            35677889999999999999985 46889999988643 22333467899999999999999999999988889999999


Q ss_pred             cccC
Q 036177          217 FILN  220 (221)
Q Consensus       217 ~~~~  220 (221)
                      |+.+
T Consensus        84 ~~~~   87 (291)
T cd07870          84 YMHT   87 (291)
T ss_pred             cccC
Confidence            9864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.15  E-value=2.4e-10  Score=90.17  Aligned_cols=76  Identities=28%  Similarity=0.418  Sum_probs=63.5

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++.. .++..+|+|.++..   .......+.+|..++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            3689999999999985 45788999988642   333445688899988877 899999999999999999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 ~   81 (329)
T cd05618          81 G   81 (329)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.15  E-value=1.1e-10  Score=87.33  Aligned_cols=82  Identities=24%  Similarity=0.347  Sum_probs=69.9

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|...+.||.|+||.|...+. .+|...|+|.+...   .....+...+|-.+|+.+.||.+++|.+.+.+.+.++|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            4566688999999999999984 46788999998652   2334556789999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||.++|
T Consensus       124 eyv~GG  129 (355)
T KOG0616|consen  124 EYVPGG  129 (355)
T ss_pred             eccCCc
Confidence            999987

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.14  E-value=9.4e-11  Score=98.61  Aligned_cols=86  Identities=20%  Similarity=0.370  Sum_probs=71.4

Q ss_pred             hhhccCccccceecccCceEEEEEEeCCC-cEEEEEeccCCCcccHHHHHHHHHHHHcCC-CCceeeeeeE-EEeC----
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTDG-RIVAVKKSKSVHESNVEQFINEVVILSQIN-HRNVVKLLGC-CLET----  208 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~~-~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~-~~~~----  208 (221)
                      .+..-++.+.+.|.+|+|+.||.+....+ ..+|+|++-..++...+...+|+.+|+.|+ |+|||.+++. ....    
T Consensus        33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~  112 (738)
T KOG1989|consen   33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN  112 (738)
T ss_pred             EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence            44455677789999999999999997555 899999987778888899999999999995 9999999993 3221    


Q ss_pred             --CeeEEEEEcccCC
Q 036177          209 --EVPLLVYEFILNG  221 (221)
Q Consensus       209 --~~~~lv~e~~~~G  221 (221)
                        -+.+|+|||+++|
T Consensus       113 ~~~EvllLmEyC~gg  127 (738)
T KOG1989|consen  113 GVWEVLLLMEYCKGG  127 (738)
T ss_pred             ceeEEEeehhhccCC
Confidence              2678999999965

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.14  E-value=1.4e-10  Score=88.64  Aligned_cols=82  Identities=29%  Similarity=0.468  Sum_probs=69.4

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|++.+.||+|+||.||++.. .++..+++|.+..   ........|.+|+.+++.++||||+++++.+...+..++++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            3567788999999999999984 5788999997754   22334567999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        82 e~~~~~   87 (267)
T cd08229          82 ELADAG   87 (267)
T ss_pred             EecCCC
Confidence            999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.14  E-value=4.1e-10  Score=86.85  Aligned_cols=79  Identities=32%  Similarity=0.497  Sum_probs=67.2

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |+..+.||+|+||.||++.. .++..+++|.++..  .......+.+|+.++..++||||+++++.+...+..++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL   81 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence            56678899999999999985 46889999987642  3334567889999999999999999999999999999999998


Q ss_pred             cC
Q 036177          219 LN  220 (221)
Q Consensus       219 ~~  220 (221)
                      ++
T Consensus        82 ~~   83 (285)
T cd07861          82 SM   83 (285)
T ss_pred             CC
Confidence            63

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.14  E-value=1.3e-11  Score=100.26  Aligned_cols=80  Identities=29%  Similarity=0.499  Sum_probs=68.3

Q ss_pred             CccccceecccCceEEEEEE-eCCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      -|...+.||+|+||.||-+. ..+...||||.+.-.   +...+.+++.|+..|.+++|||++.+-|++......|||||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            35667899999999999998 456788999998653   33346778999999999999999999999999999999999


Q ss_pred             cccC
Q 036177          217 FILN  220 (221)
Q Consensus       217 ~~~~  220 (221)
                      |+-+
T Consensus       107 YClG  110 (948)
T KOG0577|consen  107 YCLG  110 (948)
T ss_pred             HHhc
Confidence            9854

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.14  E-value=3e-10  Score=87.92  Aligned_cols=81  Identities=30%  Similarity=0.470  Sum_probs=67.9

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCC-cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|...+.||+|+||.||++... ++..+|+|.+.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            45777889999999999999854 67899999876422 22334578999999999999999999999988999999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus        85 ~~~   87 (291)
T cd07844          85 LDT   87 (291)
T ss_pred             CCC
Confidence            864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.14  E-value=3.4e-10  Score=87.25  Aligned_cols=80  Identities=30%  Similarity=0.493  Sum_probs=68.0

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +|+..+.||+|++|.||++.. .++..+++|.++.. .......+.+|+.+++.++||||+++++.+...+..++++||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            356688999999999999996 45888999988653 2333466889999999999999999999999999999999999


Q ss_pred             cC
Q 036177          219 LN  220 (221)
Q Consensus       219 ~~  220 (221)
                      ++
T Consensus        81 ~~   82 (284)
T cd07836          81 DK   82 (284)
T ss_pred             Cc
Confidence            74

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.14  E-value=2.1e-10  Score=87.58  Aligned_cols=80  Identities=23%  Similarity=0.444  Sum_probs=67.4

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc------ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE------SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      |+..+.||+|+||.||.+.. .++..+|+|.+.....      .....+.+|+.++++++||||+++++.+...+..+++
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v   81 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF   81 (268)
T ss_pred             ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence            55678899999999999984 5688999998764221      1246789999999999999999999999988999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      +||+++|
T Consensus        82 ~e~~~~~   88 (268)
T cd06630          82 VEWMAGG   88 (268)
T ss_pred             EeccCCC
Confidence            9999865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.14  E-value=2.6e-10  Score=88.49  Aligned_cols=83  Identities=28%  Similarity=0.455  Sum_probs=68.9

Q ss_pred             ccCccccceecccCceEEEEEEeCC-----------------CcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTD-----------------GRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVK  200 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~-----------------~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~  200 (221)
                      ..+|.+.+.||+|+||.||++....                 +..+|+|.+.. ........|.+|+.+|++++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            4567788999999999999987532                 24589998765 33345678999999999999999999


Q ss_pred             eeeEEEeCCeeEEEEEcccCC
Q 036177          201 LLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       201 l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +++.+...+..++++||+++|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~  104 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENG  104 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCC
Confidence            999999888999999999764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.14  E-value=1.8e-10  Score=91.06  Aligned_cols=88  Identities=23%  Similarity=0.428  Sum_probs=71.5

Q ss_pred             hhhhhccCccccceecccCceEEEEEEeC--------CCcEEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeeeee
Q 036177          134 DLEKATDNYKVSRIIGQGGQGTVFKGMLT--------DGRIVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKLLG  203 (221)
Q Consensus       134 ~~~~~~~~~~~~~~lg~G~fg~v~~~~~~--------~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g  203 (221)
                      +|+....+|.+.+.||+|+||.||.+...        ....+|+|.++.. ......++.+|+.++.++ +||||+++++
T Consensus         6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~   85 (334)
T cd05100           6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLG   85 (334)
T ss_pred             ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence            44555566888999999999999999731        1236899987652 334457899999999999 8999999999


Q ss_pred             EEEeCCeeEEEEEcccCC
Q 036177          204 CCLETEVPLLVYEFILNG  221 (221)
Q Consensus       204 ~~~~~~~~~lv~e~~~~G  221 (221)
                      .+...+..++++||+++|
T Consensus        86 ~~~~~~~~~lv~e~~~~g  103 (334)
T cd05100          86 ACTQDGPLYVLVEYASKG  103 (334)
T ss_pred             EEccCCceEEEEecCCCC
Confidence            999988999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.14  E-value=1.1e-10  Score=89.99  Aligned_cols=81  Identities=28%  Similarity=0.441  Sum_probs=68.5

Q ss_pred             CccccceecccCceEEEEEEeC-CCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      +|+..+.||+|+||.||++... .+..+|+|.+...  .....+.+.+|+++++.++||||+++++++...+..++++||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF   81 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence            4667889999999999999964 4789999987542  222356788999999999999999999999988999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      ++++
T Consensus        82 ~~~~   85 (286)
T cd07846          82 VDHT   85 (286)
T ss_pred             CCcc
Confidence            9764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.14  E-value=2.7e-10  Score=86.34  Aligned_cols=81  Identities=25%  Similarity=0.498  Sum_probs=70.3

Q ss_pred             ccCccccceecccCceEEEEEEeCC-CcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~-~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      .++|+..+.||+|.||.||++.... +..+++|.++....  .+.+.+|+.++++++||||+++++.+......++++||
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            3567788899999999999999654 78899998865332  67899999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      ++++
T Consensus        80 ~~~~   83 (256)
T cd06612          80 CGAG   83 (256)
T ss_pred             CCCC
Confidence            9864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.14  E-value=3.5e-10  Score=86.81  Aligned_cols=81  Identities=25%  Similarity=0.396  Sum_probs=69.2

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +|+..+.||.|+||.||++.. .++..+++|.+... .......+.+|+.+++.++||||+++.+.+......++++||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            466678899999999999985 45788999987643 3444567899999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (274)
T cd06609          82 GGG   84 (274)
T ss_pred             CCC
Confidence            865

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.14  E-value=9.4e-11  Score=90.12  Aligned_cols=80  Identities=25%  Similarity=0.443  Sum_probs=67.7

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      |+..+.||+|+||.||+|.. ..+..||+|.++. ........+.+|+.++++++||||+++++.+...+..++|+||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            45567899999999999985 4577899998764 233445679999999999999999999999999899999999998


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus        86 ~~   87 (277)
T cd06642          86 GG   87 (277)
T ss_pred             CC
Confidence            75

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.13  E-value=4e-10  Score=87.38  Aligned_cols=81  Identities=27%  Similarity=0.424  Sum_probs=68.4

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++|+..+.||+|.+|.||++.. .++..+++|.++..  .......+.+|+.++++++||||+++++.+...+..++|+|
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            3577788999999999999985 46889999987542  22334678899999999999999999999999999999999


Q ss_pred             cccC
Q 036177          217 FILN  220 (221)
Q Consensus       217 ~~~~  220 (221)
                      |+++
T Consensus        82 ~~~~   85 (294)
T PLN00009         82 YLDL   85 (294)
T ss_pred             cccc
Confidence            9864

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.13  E-value=2.4e-10  Score=99.87  Aligned_cols=86  Identities=24%  Similarity=0.400  Sum_probs=70.1

Q ss_pred             hhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe--CCe
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLE--TEV  210 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~  210 (221)
                      ....++|.+.+.||+|+||.||++.. ..+..+|+|.+..  ........|..|+.+|..++|||||++++.+..  ...
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence            33456788899999999999999985 4567889998754  334446779999999999999999999998754  356


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+|||||+++|
T Consensus        89 lyIVMEY~~gG   99 (1021)
T PTZ00266         89 LYILMEFCDAG   99 (1021)
T ss_pred             EEEEEeCCCCC
Confidence            89999999875

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.13  E-value=3.3e-10  Score=86.28  Aligned_cols=80  Identities=24%  Similarity=0.458  Sum_probs=69.2

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc--ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE--SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |+..+.||+|+||.||++.. .++..+++|.++....  ...+.+.+|+.++++++|+||+++++.....+..++++||+
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC   81 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence            56678999999999999985 4678999998865433  35678999999999999999999999998889999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (264)
T cd06626          82 SGG   84 (264)
T ss_pred             CCC
Confidence            864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.13  E-value=5.9e-10  Score=84.98  Aligned_cols=81  Identities=27%  Similarity=0.457  Sum_probs=69.6

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +|++.+.||.|+||.||++.. .++..+++|.+... .......+.+|+..++.++|+||+++.+.....+..++++||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~   81 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL   81 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence            577788999999999999984 46778999988642 2335678999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (267)
T cd06610          82 SGG   84 (267)
T ss_pred             CCC
Confidence            865

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.13  E-value=2.7e-10  Score=88.94  Aligned_cols=82  Identities=29%  Similarity=0.462  Sum_probs=68.8

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      ...|...+.||+|.||.||++.. .++..|++|.+...   .......+.+|+.+++.++||||+++.+++...+..+++
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv   93 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV   93 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence            34577788999999999999985 46889999987542   223345789999999999999999999999999999999


Q ss_pred             EEcccC
Q 036177          215 YEFILN  220 (221)
Q Consensus       215 ~e~~~~  220 (221)
                      +||+++
T Consensus        94 ~e~~~g   99 (307)
T cd06607          94 MEYCLG   99 (307)
T ss_pred             HHhhCC
Confidence            999874

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=4.6e-10  Score=85.49  Aligned_cols=82  Identities=26%  Similarity=0.488  Sum_probs=68.9

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCC-----cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH-----ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      ++|...+.||+|+||.||.+.. ..+..+++|.++...     ......+.+|+.++++++||||+++++.+...+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            4577789999999999999984 468899999875421     1234578899999999999999999999999999999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ++||+++|
T Consensus        82 v~e~~~~~   89 (263)
T cd06625          82 FMEYMPGG   89 (263)
T ss_pred             EEEECCCC
Confidence            99999865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.13  E-value=3.4e-10  Score=90.38  Aligned_cols=83  Identities=29%  Similarity=0.402  Sum_probs=67.7

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC------
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE------  209 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------  209 (221)
                      .++|...+.||+|+||.||++.. ..+..+|+|.+..  ........+.+|+.+++.++||||+++++++....      
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            35688889999999999999984 4588999998854  23344567889999999999999999999876543      


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..+++|||++++
T Consensus       100 ~~~lv~e~~~~~  111 (359)
T cd07876         100 DVYLVMELMDAN  111 (359)
T ss_pred             eeEEEEeCCCcC
Confidence            468999998753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.13  E-value=2.9e-10  Score=90.04  Aligned_cols=82  Identities=18%  Similarity=0.127  Sum_probs=62.8

Q ss_pred             hhccCccccceecccCceEEEEEEeC--CCcEEEEEeccCC-----CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGMLT--DGRIVAVKKSKSV-----HESNVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~~--~~~~vavk~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      ...++|.+.+.||+|+||+||++...  ++..+|+|.+...     .......|.+|+++|.+++|+|+++.+..   .+
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~   91 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG   91 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence            34467888999999999999999853  4677899986432     12235669999999999999999853322   24


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..+|+|||++++
T Consensus        92 ~~~LVmE~~~G~  103 (365)
T PRK09188         92 KDGLVRGWTEGV  103 (365)
T ss_pred             CcEEEEEccCCC
Confidence            579999999864

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.13  E-value=3.9e-10  Score=87.99  Aligned_cols=81  Identities=20%  Similarity=0.293  Sum_probs=68.7

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCCC---cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH---ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|...+.||+|+||.||++.. ..+..|++|.+....   ......+.+|+.+++.++||||+++++.+...+..+++||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME   81 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence            567788999999999999984 457889999876532   2335678899999999999999999999998889999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~g~   86 (305)
T cd05609          82 YVEGG   86 (305)
T ss_pred             cCCCC
Confidence            99875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.13  E-value=2.5e-10  Score=87.40  Aligned_cols=75  Identities=28%  Similarity=0.401  Sum_probs=61.2

Q ss_pred             eecccCceEEEEEEeCCC---cEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          147 IIGQGGQGTVFKGMLTDG---RIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       147 ~lg~G~fg~v~~~~~~~~---~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .||+|+||.||++...++   ..+++|.++.. .....+.|.+|+.+++.++||||+++++.+......+++|||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            589999999999974333   34567766542 3344578999999999999999999999999988999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.13  E-value=5.9e-10  Score=85.13  Aligned_cols=80  Identities=28%  Similarity=0.561  Sum_probs=65.9

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcc---------cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHES---------NVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      +.+...||+|+||.||++.. .++..+++|.+......         ..+.+.+|+.++++++||||+++++.+...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            44567899999999999984 45788999987542221         125688999999999999999999999998999


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++++||+++|
T Consensus        82 ~lv~e~~~~~   91 (267)
T cd06628          82 NIFLEYVPGG   91 (267)
T ss_pred             EEEEEecCCC
Confidence            9999999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.13  E-value=2.7e-10  Score=87.29  Aligned_cols=80  Identities=26%  Similarity=0.451  Sum_probs=65.5

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc---c-------cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE---S-------NVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~---~-------~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      +...+.||+|+||.||+|.. .++..+|+|.++....   .       ..+.+.+|+.+++.++|||++++++.+...+.
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            45577899999999999984 4688999997643111   1       13468889999999999999999999999899


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++++||+++|
T Consensus        83 ~~lv~e~~~~~   93 (272)
T cd06629          83 LSIFLEYVPGG   93 (272)
T ss_pred             eEEEEecCCCC
Confidence            99999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.13  E-value=3e-10  Score=87.66  Aligned_cols=81  Identities=32%  Similarity=0.476  Sum_probs=69.5

Q ss_pred             CccccceecccCceEEEEEEeC-CCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      +|++.+.||+|.||.||++... ++..+++|.++.  ........+.+|+.+++.++|+||+++++.+...+..++++||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            4677889999999999999854 578899998764  2334457799999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      ++++
T Consensus        82 ~~~~   85 (288)
T cd07833          82 VERT   85 (288)
T ss_pred             CCCC
Confidence            9864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.13  E-value=3.2e-10  Score=86.79  Aligned_cols=79  Identities=34%  Similarity=0.696  Sum_probs=63.0

Q ss_pred             cccceecccCceEEEEEEeCC-Cc--EEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC------Cee
Q 036177          143 KVSRIIGQGGQGTVFKGMLTD-GR--IVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLET------EVP  211 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~~~-~~--~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~~~  211 (221)
                      .+.+.||+|+||.||+|.+.. +.  .+|+|.++.  .+....+.|.+|+.+|+.++||||+++++.+...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            456789999999999998644 32  589998764  2344567899999999999999999999987542      256


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++++||+++|
T Consensus        82 ~~v~e~~~~~   91 (272)
T cd05075          82 VVILPFMKHG   91 (272)
T ss_pred             EEEEEeCCCC
Confidence            8999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.12  E-value=4.9e-10  Score=85.53  Aligned_cols=82  Identities=24%  Similarity=0.463  Sum_probs=66.1

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--C---cccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--Cee
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--H---ESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVP  211 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~  211 (221)
                      .+|...+.||+|+||.||.+.. .++..+++|.+...  .   ......+.+|+.++.+++||||+++++.+...  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4577789999999999999985 45889999987531  1   12345788999999999999999999987653  467


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++++||+++|
T Consensus        82 ~~v~e~~~~~   91 (265)
T cd06652          82 SIFMEHMPGG   91 (265)
T ss_pred             EEEEEecCCC
Confidence            8999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.12  E-value=2.5e-10  Score=93.95  Aligned_cols=85  Identities=25%  Similarity=0.449  Sum_probs=73.3

Q ss_pred             hhccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCee
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~  211 (221)
                      ...++|.+.++||+|+||+|+.+.+ .++...|||.++.   ....+.+..+.|.+++.-. +||.+++|++.+...+.+
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l  444 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL  444 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence            3446789999999999999999996 4577899999876   4455677889999998877 699999999999999999


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      +.||||..+|
T Consensus       445 ~fvmey~~Gg  454 (694)
T KOG0694|consen  445 FFVMEYVAGG  454 (694)
T ss_pred             EEEEEecCCC
Confidence            9999999987

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.12  E-value=2.7e-10  Score=88.26  Aligned_cols=82  Identities=28%  Similarity=0.518  Sum_probs=69.4

Q ss_pred             cCccccceecccCceEEEEEEeC------CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      .+|.+.+.||+|+||.||.+...      +...+++|.+..........|.+|+.++++++||||+++++.+...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            45677889999999999999732      245688998876555556789999999999999999999999998889999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      +|||+++|
T Consensus        85 v~e~~~~~   92 (291)
T cd05094          85 VFEYMKHG   92 (291)
T ss_pred             EEecCCCC
Confidence            99999865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.12  E-value=4.5e-10  Score=86.48  Aligned_cols=74  Identities=26%  Similarity=0.319  Sum_probs=61.5

Q ss_pred             ecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          148 IGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       148 lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ||+|+||.||++.. ..+..+|+|.+...   .......+..|+.++.+++||||+++.+.+......+++|||+++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~   78 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGG   78 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCC
Confidence            68999999999985 45889999987541   1222345677999999999999999999998888999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.12  E-value=3.5e-10  Score=88.94  Aligned_cols=76  Identities=24%  Similarity=0.406  Sum_probs=63.5

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++.. ..+..+|+|.++..   .......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            3689999999999985 35789999988642   233456688899999876 899999999999999999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 ~   81 (321)
T cd05591          81 G   81 (321)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.12  E-value=2e-11  Score=95.53  Aligned_cols=81  Identities=26%  Similarity=0.439  Sum_probs=71.4

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      .|...+.||+|+||.||+|.. ..++.||+|.+.- ....+.++..+|+.+|+.++++||.+++|.+..+..++++|||+
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            355568999999999999984 4578899999875 55566788999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      .+|
T Consensus        94 ~gG   96 (467)
T KOG0201|consen   94 GGG   96 (467)
T ss_pred             cCc
Confidence            887

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.12  E-value=2.6e-10  Score=87.30  Aligned_cols=82  Identities=33%  Similarity=0.527  Sum_probs=66.4

Q ss_pred             ccCccccceecccCceEEEEEEeCC----CcEEEEEeccCCC-cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTD----GRIVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~----~~~vavk~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      ..++.+.+.||+|+||.||+|...+    ...+++|...... ....+.|.+|+.++++++||||+++++++.. +..++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l   83 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI   83 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence            4557778899999999999998533    2468999876533 4456789999999999999999999998764 56789


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      +|||+++|
T Consensus        84 v~e~~~~~   91 (270)
T cd05056          84 VMELAPLG   91 (270)
T ss_pred             EEEcCCCC
Confidence            99999865

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.11  E-value=3e-10  Score=88.29  Aligned_cols=82  Identities=28%  Similarity=0.561  Sum_probs=67.7

Q ss_pred             cCccccceecccCceEEEEEEeCC-C--cEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTD-G--RIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~-~--~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  214 (221)
                      ++|++.+.||+|+||.||++...+ +  ..+++|.++. ......+.|.+|+.++.++ +||||+++++.+...+..+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            467788999999999999998643 3  2478888775 3334456799999999999 799999999999888889999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      +||+++|
T Consensus        82 ~e~~~~~   88 (297)
T cd05089          82 IEYAPYG   88 (297)
T ss_pred             EEecCCC
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.11  E-value=4.4e-10  Score=85.53  Aligned_cols=74  Identities=30%  Similarity=0.489  Sum_probs=60.2

Q ss_pred             eecccCceEEEEEEeC---CCcEEEEEeccCCC-cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          147 IIGQGGQGTVFKGMLT---DGRIVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       147 ~lg~G~fg~v~~~~~~---~~~~vavk~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .||+|+||.||+|.+.   .+..||+|.+.... ....+.|.+|+.++++++||||+++++.+. .+..+++|||+++|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~   79 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG   79 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence            4899999999999753   34569999886543 333567999999999999999999999874 45678999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.11  E-value=3.7e-10  Score=88.99  Aligned_cols=76  Identities=26%  Similarity=0.389  Sum_probs=61.3

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHH-HHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVV-ILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++.. .++..+|+|.+...   .......+..|.. +++.++||||+++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            3689999999999984 46889999988542   2233445666665 46778999999999999999999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 ~   81 (325)
T cd05604          81 G   81 (325)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.11  E-value=2.6e-10  Score=86.48  Aligned_cols=81  Identities=22%  Similarity=0.412  Sum_probs=68.2

Q ss_pred             CccccceecccCceEEEEEEeC-CCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      +|+..+.||+|+||.||++... ++..+++|.+...  .....+.+.+|+.+++.++|+||+++++.+...+..++++||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            3566789999999999999853 5788999987542  233456788999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      ++++
T Consensus        81 ~~~~   84 (257)
T cd08225          81 CDGG   84 (257)
T ss_pred             CCCC
Confidence            9764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.11  E-value=3.3e-10  Score=89.10  Aligned_cols=76  Identities=34%  Similarity=0.538  Sum_probs=63.7

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++.. .++..+|+|.++.   ........+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999985 4578999998864   2234456788899998877 799999999999999999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 g   81 (320)
T cd05590          81 G   81 (320)
T ss_pred             c
Confidence            6

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.11  E-value=2.2e-10  Score=88.29  Aligned_cols=81  Identities=26%  Similarity=0.428  Sum_probs=66.9

Q ss_pred             CccccceecccCceEEEEEEeC------CCcEEEEEeccCCCc-ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSVHE-SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      +|.+.+.||+|+||.||+|...      .+..||+|.++.... ...+.|.+|+.++..++||||+++++.+...+..++
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            3566788999999999999852      246799999875332 234678999999999999999999999998889999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ++||+++|
T Consensus        86 ~~e~~~~~   93 (283)
T cd05091          86 IFSYCSHS   93 (283)
T ss_pred             EEEcCCCC
Confidence            99998754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.11  E-value=4.7e-10  Score=96.34  Aligned_cols=82  Identities=23%  Similarity=0.341  Sum_probs=69.9

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCC---cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH---ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||.||++... .+..||+|.++...   ......+.+|+.+++.++||||+++++.+...+..+|||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            46777899999999999999964 68899999986532   233467889999999999999999999998889999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        84 Ey~~g~   89 (669)
T cd05610          84 EYLIGG   89 (669)
T ss_pred             eCCCCC
Confidence            999865

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.11  E-value=5.4e-10  Score=84.53  Aligned_cols=76  Identities=37%  Similarity=0.633  Sum_probs=65.8

Q ss_pred             ceecccCceEEEEEEeCCCcEEEEEeccCCCc-ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          146 RIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHE-SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +.||+|+||.||++...++..+++|.++.... .....|.+|+.++++++||||+++++.+......++++||+++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   77 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG   77 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence            36899999999999976689999998865333 34568999999999999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.11  E-value=5e-10  Score=86.42  Aligned_cols=81  Identities=32%  Similarity=0.428  Sum_probs=66.7

Q ss_pred             CccccceecccCceEEEEEEe-----CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--CeeE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-----TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPL  212 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-----~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~  212 (221)
                      .|+..+.||+|+||.||.+.+     ..+..+++|.++.. .......|.+|+.+++.++||||+++.+++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            356688999999999999974     24678999998753 334456799999999999999999999988764  5688


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      ++|||+++|
T Consensus        85 lv~e~~~g~   93 (284)
T cd05079          85 LIMEFLPSG   93 (284)
T ss_pred             EEEEccCCC
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.10  E-value=7.1e-10  Score=85.75  Aligned_cols=81  Identities=23%  Similarity=0.297  Sum_probs=66.5

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--CeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e  216 (221)
                      +|...+.||.|.+|.||.+.. ..+..+++|.+... .......+.+|+.+++.++||||+++++.+...  ...+++||
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   81 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME   81 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence            466678999999999999996 45788999987642 333456799999999999999999999987653  36799999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~~~   86 (287)
T cd06621          82 YCEGG   86 (287)
T ss_pred             ecCCC
Confidence            99865

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.10  E-value=1.3e-10  Score=95.32  Aligned_cols=81  Identities=26%  Similarity=0.422  Sum_probs=70.7

Q ss_pred             CccccceecccCceEEEEEE-eCCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      -+++++.||.|+-|.|..|+ ...|+.+|||++...   +........+|+.+|+-+.||||++|+.++.....+|+|+|
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE   92 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE   92 (786)
T ss_pred             ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence            35678999999999999998 568999999998543   33444568899999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        93 yv~gG   97 (786)
T KOG0588|consen   93 YVPGG   97 (786)
T ss_pred             ecCCc
Confidence            99988

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.10  E-value=5e-10  Score=87.93  Aligned_cols=76  Identities=26%  Similarity=0.385  Sum_probs=62.5

Q ss_pred             ceecccCceEEEEEEeC-CCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++... .+..+|+|.++..   .......+..|..++..+ +||||+++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            36899999999999853 5788999988652   223345677888888764 999999999999999999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 g   81 (316)
T cd05619          81 G   81 (316)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.10  E-value=2.8e-10  Score=87.77  Aligned_cols=80  Identities=34%  Similarity=0.512  Sum_probs=67.2

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      +|+..+.||+|+||.||++.. .++..+++|.++..  .......+.+|+.++++++||||+++++++...+..+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            356678999999999999985 46889999987642  223345789999999999999999999999888899999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus        81 ~~~   83 (284)
T cd07860          81 LHQ   83 (284)
T ss_pred             ccc
Confidence            863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.10  E-value=4.5e-10  Score=88.15  Aligned_cols=76  Identities=24%  Similarity=0.365  Sum_probs=61.7

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++.. ..+..||+|.++..   .....+.+..|..++... +||||+++++.....+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999985 45788999988642   233445667777777754 899999999999888999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 g   81 (316)
T cd05592          81 G   81 (316)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.10  E-value=6.1e-10  Score=87.71  Aligned_cols=81  Identities=20%  Similarity=0.329  Sum_probs=65.9

Q ss_pred             CccccceecccCceEEEEEEeC-CCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCC-CceeeeeeEEEeCCeeEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV---HESNVEQFINEVVILSQINH-RNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h-~niv~l~g~~~~~~~~~lv~  215 (221)
                      +|.+.+.||+|+||.||++... .+..+|+|.++..   .....+.+..|..++..++| ++|+.+.+.+...+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            3567889999999999999853 5678999988642   33445678899999999965 55888888888888999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        81 E~~~~g   86 (324)
T cd05587          81 EYVNGG   86 (324)
T ss_pred             cCCCCC
Confidence            999876

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.10  E-value=6.1e-10  Score=87.63  Aligned_cols=81  Identities=20%  Similarity=0.322  Sum_probs=65.8

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      +|...+.||+|+||.||++.. ..+..+|+|.++..   .......+..|..++..+ +|++|+.+.+++...+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            356688999999999999985 35778999987642   223345677888888877 6899999999998889999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        81 E~~~~g   86 (323)
T cd05616          81 EYVNGG   86 (323)
T ss_pred             cCCCCC
Confidence            999876

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.10  E-value=6.2e-10  Score=84.37  Aligned_cols=80  Identities=24%  Similarity=0.409  Sum_probs=68.2

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |...+.||+|+||.||++.. .++..+++|.+..  ........+.+|+.+++.++||||+++++.....+..++++||+
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA   81 (256)
T ss_pred             ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence            56678999999999999985 4678899998754  23344678999999999999999999999988888999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (256)
T cd08220          82 PGG   84 (256)
T ss_pred             CCC
Confidence            875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.10  E-value=3.3e-10  Score=86.02  Aligned_cols=74  Identities=30%  Similarity=0.541  Sum_probs=60.6

Q ss_pred             ceecccCceEEEEEEeCCCc-----------EEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          146 RIIGQGGQGTVFKGMLTDGR-----------IVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~~~-----------~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      +.||+|+||.||++...+..           .+++|.+...... ...|.+|+.+|++++||||++++|.+.. ...+++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            36899999999999864322           4777776543332 6789999999999999999999999888 778999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      +||+++|
T Consensus        79 ~e~~~~~   85 (259)
T cd05037          79 EEYVKFG   85 (259)
T ss_pred             EEcCCCC
Confidence            9999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.10  E-value=4.3e-10  Score=88.34  Aligned_cols=76  Identities=25%  Similarity=0.432  Sum_probs=63.8

Q ss_pred             ceecccCceEEEEEEeC-CCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++... ++..+|+|.++..   .......+.+|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36899999999999854 5778999988642   234456688999999888 799999999999989999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 ~   81 (318)
T cd05570          81 G   81 (318)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.09  E-value=4.9e-10  Score=88.20  Aligned_cols=76  Identities=22%  Similarity=0.389  Sum_probs=60.9

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHH-HHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVV-ILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++.. .++..+|+|.+...   .......+++|.. +++.++||||+++++.+...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            3689999999999995 46889999988642   2223345666655 46788999999999999999999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 g   81 (323)
T cd05575          81 G   81 (323)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.09  E-value=5.6e-10  Score=85.96  Aligned_cols=80  Identities=19%  Similarity=0.315  Sum_probs=64.4

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHH-HHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVI-LSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~-l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      +|...+.||+|+||.||++.. .++..||+|.++.. .......+..|... ++.++||||+++++.+...+..+++|||
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~   81 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV   81 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence            567788999999999999985 46899999988653 22233456667765 5666999999999999988899999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus        82 ~~~   84 (283)
T cd06617          82 MDT   84 (283)
T ss_pred             hcc
Confidence            874

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.09  E-value=4.3e-10  Score=88.45  Aligned_cols=76  Identities=24%  Similarity=0.380  Sum_probs=60.8

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHH-HHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVV-ILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++.. .++..+|+|.+...   .......+.+|.. +++.++||||+++++.+...+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999985 46789999987542   2223345666654 57888999999999999889999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 ~   81 (321)
T cd05603          81 G   81 (321)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.09  E-value=6.3e-10  Score=85.19  Aligned_cols=84  Identities=25%  Similarity=0.484  Sum_probs=67.9

Q ss_pred             hhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeC------
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLET------  208 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~------  208 (221)
                      .+.+.|...+.||+|+||.||++.. ..+..+|+|.+.... .....+.+|+.++.++ +||||+++++.+...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            3556677788999999999999985 457889999886433 3346788999999998 799999999998753      


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      ...+++|||+++|
T Consensus        82 ~~~~iv~e~~~~~   94 (272)
T cd06637          82 DQLWLVMEFCGAG   94 (272)
T ss_pred             cEEEEEEEcCCCC
Confidence            3578999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.09  E-value=9.3e-10  Score=83.76  Aligned_cols=81  Identities=26%  Similarity=0.386  Sum_probs=70.2

Q ss_pred             CccccceecccCceEEEEEEeC-CCcEEEEEeccCCCc-ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHE-SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +|...+.||+|++|.||++... ++..+++|.+..... .....|.+|+..+.+++||||+++++.+...+..++++||+
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM   81 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence            5667889999999999999864 588999998866433 44678999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (264)
T cd06623          82 DGG   84 (264)
T ss_pred             CCC
Confidence            864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.09  E-value=2.8e-10  Score=88.52  Aligned_cols=77  Identities=34%  Similarity=0.438  Sum_probs=66.9

Q ss_pred             cceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          145 SRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ...||+|+||.||++.. .++..+++|.+........+.+.+|+.++..++||||+++++.+...+..++++||+++|
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~  103 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG  103 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence            45799999999999985 468899999986544455677899999999999999999999999999999999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.09  E-value=5.7e-10  Score=85.88  Aligned_cols=81  Identities=27%  Similarity=0.562  Sum_probs=66.3

Q ss_pred             cCccccceecccCceEEEEEEeC-CCc----EEEEEeccCCC-cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGR----IVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~----~vavk~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      .+|...+.||+|+||.||++.+. ++.    .+++|.++... .....++.+|+.+|++++||||+++++.+.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            45677889999999999999853 232    58999876533 3445679999999999999999999999877 77899


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ++||+++|
T Consensus        86 v~e~~~~g   93 (279)
T cd05057          86 ITQLMPLG   93 (279)
T ss_pred             EEecCCCC
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.09  E-value=6.3e-10  Score=84.35  Aligned_cols=79  Identities=37%  Similarity=0.671  Sum_probs=67.4

Q ss_pred             cccceecccCceEEEEEEeCC-----CcEEEEEeccCCCcc-cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          143 KVSRIIGQGGQGTVFKGMLTD-----GRIVAVKKSKSVHES-NVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~~~-----~~~vavk~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      .+.+.||+|+||.||++....     +..+|+|.++..... ....+.+|+.++..++|+||+++++.+...+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            456789999999999998643     378999998764433 56789999999999999999999999998889999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~~~   86 (258)
T smart00219       82 YMEGG   86 (258)
T ss_pred             ccCCC
Confidence            99764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.09  E-value=8.5e-10  Score=85.07  Aligned_cols=80  Identities=34%  Similarity=0.518  Sum_probs=64.4

Q ss_pred             ccccceecccCceEEEEEEe-----CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--CeeEE
Q 036177          142 YKVSRIIGQGGQGTVFKGML-----TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPLL  213 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-----~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~l  213 (221)
                      ++..+.||+|+||.||.+.+     .++..||+|.++.. .......|.+|+.+|++++||||+++.+.+...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            36678999999999987653     35678999988653 233456799999999999999999999987653  45789


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      +|||+++|
T Consensus        86 v~e~~~~~   93 (283)
T cd05080          86 IMEYVPLG   93 (283)
T ss_pred             EecCCCCC
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=7.9e-10  Score=84.93  Aligned_cols=80  Identities=30%  Similarity=0.536  Sum_probs=68.1

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCC---CCceeeeeeEEEeCCeeEEEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQIN---HRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~---h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      |+..+.||+|+||.||++.. .++..+++|.++. ........+.+|+.++++++   |||++++.+.+...+..+++||
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e   82 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME   82 (277)
T ss_pred             hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence            55678899999999999995 5688999998864 33445567899999999986   9999999999998889999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        83 ~~~~~   87 (277)
T cd06917          83 YAEGG   87 (277)
T ss_pred             cCCCC
Confidence            99875

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.08  E-value=7e-10  Score=87.49  Aligned_cols=76  Identities=26%  Similarity=0.404  Sum_probs=64.0

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++.. .++..+|+|.++..   .......+.+|..++.++ +||||+++.+.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            3689999999999985 45788999998642   233456688999999888 799999999999889999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 ~   81 (327)
T cd05617          81 G   81 (327)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.08  E-value=8.4e-10  Score=86.63  Aligned_cols=81  Identities=30%  Similarity=0.468  Sum_probs=67.6

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ..|...+.||+|+||.||++.. .++..+++|.+...   .......+.+|+.++++++|||++++++++......++++
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  104 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM  104 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence            3466688899999999999985 46788999987542   2233457899999999999999999999999999999999


Q ss_pred             EcccC
Q 036177          216 EFILN  220 (221)
Q Consensus       216 e~~~~  220 (221)
                      ||+++
T Consensus       105 e~~~g  109 (317)
T cd06635         105 EYCLG  109 (317)
T ss_pred             eCCCC
Confidence            99864

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.08  E-value=3.8e-10  Score=86.28  Aligned_cols=79  Identities=29%  Similarity=0.488  Sum_probs=65.4

Q ss_pred             CccccceecccCceEEEEEE-eCCCcEEEEEeccCCC--cccHHHHHHHHHHHHcCCCCc-eeeeeeEEEeCC------e
Q 036177          141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVH--ESNVEQFINEVVILSQINHRN-VVKLLGCCLETE------V  210 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~--~~~~~~~~~e~~~l~~l~h~n-iv~l~g~~~~~~------~  210 (221)
                      .|...+.||+|+||.||+|. ...|..||+|.++-..  +..-..-.+|+.+|++++|+| ||+|.++....+      .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            35556779999999999998 5678999999886522  233445789999999999999 999999998876      7


Q ss_pred             eEEEEEccc
Q 036177          211 PLLVYEFIL  219 (221)
Q Consensus       211 ~~lv~e~~~  219 (221)
                      +++|+||+.
T Consensus        92 l~lvfe~~d  100 (323)
T KOG0594|consen   92 LYLVFEFLD  100 (323)
T ss_pred             EEEEEEeec
Confidence            889999975

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.08  E-value=5.7e-10  Score=86.80  Aligned_cols=83  Identities=33%  Similarity=0.498  Sum_probs=67.6

Q ss_pred             hccCccccceecccCceEEEEEEeC-CCcEEEEEeccCCC--cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC-----
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH--ESNVEQFINEVVILSQINHRNVVKLLGCCLETE-----  209 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----  209 (221)
                      ..++|++.+.||+|+||.||+|... ++..+++|.++...  ......+.+|+.+++.++||||+++++++....     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            3456788899999999999999964 57899999886422  233456789999999999999999999887644     


Q ss_pred             -----eeEEEEEcccC
Q 036177          210 -----VPLLVYEFILN  220 (221)
Q Consensus       210 -----~~~lv~e~~~~  220 (221)
                           ..++++||+++
T Consensus        85 ~~~~~~~~lv~e~~~~  100 (302)
T cd07864          85 KKDKGAFYLVFEYMDH  100 (302)
T ss_pred             cccCCcEEEEEcccCc
Confidence                 68899999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.08  E-value=5.8e-10  Score=87.79  Aligned_cols=80  Identities=20%  Similarity=0.325  Sum_probs=64.9

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCC-CCceeeeeeEEEeCCeeEEEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      |...+.||+|+||.||++.. .++..||+|.++..   .....+.+..|..++..+. |++|+.+.+.+...+..++|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            45678999999999999985 46889999988642   2334466888999998885 5778888888888889999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 y~~~g   86 (323)
T cd05615          82 YVNGG   86 (323)
T ss_pred             CCCCC
Confidence            99876

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.08  E-value=1.1e-10  Score=88.82  Aligned_cols=76  Identities=26%  Similarity=0.494  Sum_probs=62.7

Q ss_pred             ceecccCceEEEEEEeCC--------CcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          146 RIIGQGGQGTVFKGMLTD--------GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~--------~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      +.||+|+||.||++....        ...+++|.+........+.|.+|+.+++.++||||+++++.+...+..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            368999999999997522        224778877654445567899999999999999999999999998889999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        81 ~~~g   84 (258)
T cd05078          81 VKFG   84 (258)
T ss_pred             CCCC
Confidence            9876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.08  E-value=7e-10  Score=89.57  Aligned_cols=77  Identities=18%  Similarity=0.258  Sum_probs=66.0

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ...+|++.+.||+|+||.||++.. ..++.||+|...      ...+.+|+.+|++++||||+++++++......++++|
T Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e  163 (391)
T PHA03212         90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP  163 (391)
T ss_pred             ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence            345789999999999999999984 567889999653      2357899999999999999999999998889999999


Q ss_pred             cccC
Q 036177          217 FILN  220 (221)
Q Consensus       217 ~~~~  220 (221)
                      ++.+
T Consensus       164 ~~~~  167 (391)
T PHA03212        164 RYKT  167 (391)
T ss_pred             cCCC
Confidence            8753

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.07  E-value=8.5e-10  Score=84.92  Aligned_cols=82  Identities=29%  Similarity=0.444  Sum_probs=67.4

Q ss_pred             cCccccceecccCceEEEEEEeC-----CCcEEEEEeccCCCcc-cHHHHHHHHHHHHcCCCCceeeeeeEEEe--CCee
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-----DGRIVAVKKSKSVHES-NVEQFINEVVILSQINHRNVVKLLGCCLE--TEVP  211 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-----~~~~vavk~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~  211 (221)
                      +.++..+.||+|+||.||++.+.     .+..+|+|.++..... ....|.+|+.+++.++||||+++.+++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            34666789999999999999853     3578999998764332 46789999999999999999999998876  4578


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++++||+++|
T Consensus        84 ~lv~e~~~~~   93 (284)
T cd05038          84 RLIMEYLPSG   93 (284)
T ss_pred             EEEEecCCCC
Confidence            9999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.07  E-value=5.9e-10  Score=86.59  Aligned_cols=77  Identities=30%  Similarity=0.443  Sum_probs=65.1

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcc-----cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHES-----NVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      |+..+.||+|+||.||+|.. .++..+++|.++.....     ....+..|+.++++++|+||+++++++...+..++||
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            55678899999999999985 46889999988653222     2345788999999999999999999999988999999


Q ss_pred             Ecc
Q 036177          216 EFI  218 (221)
Q Consensus       216 e~~  218 (221)
                      ||+
T Consensus        82 e~~   84 (298)
T cd07841          82 EFM   84 (298)
T ss_pred             ccc
Confidence            998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.07  E-value=8.9e-10  Score=83.68  Aligned_cols=80  Identities=33%  Similarity=0.517  Sum_probs=66.7

Q ss_pred             ccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe-CCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE-TEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~~~lv~e~  217 (221)
                      ..++.+.+.||+|+||.||++.. .+..+++|..+...  ....|.+|+.++++++|+|++++++.... .+..++++||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   81 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence            45677789999999999999987 57889999886432  34679999999999999999999998654 4578999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        82 ~~~~   85 (256)
T cd05082          82 MAKG   85 (256)
T ss_pred             CCCC
Confidence            9875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.06  E-value=9.7e-10  Score=86.81  Aligned_cols=81  Identities=21%  Similarity=0.353  Sum_probs=66.6

Q ss_pred             CccccceecccCceEEEEEEe----CCCcEEEEEeccCC----CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCee
Q 036177          141 NYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSV----HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~----~~~~~vavk~~~~~----~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~  211 (221)
                      +|.+.+.||+|+||.||++..    ..+..+|+|.++..    .....+.+.+|+.++..+ +||||+++.+.....+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            356788999999999999874    35788999987542    223345688999999999 699999999999888899


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      +++|||+++|
T Consensus        81 ~lv~e~~~~g   90 (332)
T cd05614          81 HLILDYVSGG   90 (332)
T ss_pred             EEEEeCCCCC
Confidence            9999999876

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.06  E-value=1.1e-09  Score=85.79  Aligned_cols=79  Identities=29%  Similarity=0.503  Sum_probs=66.3

Q ss_pred             ccccceecccCceEEEEEEeC---CCcEEEEEeccCCC---cccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--CeeEE
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT---DGRIVAVKKSKSVH---ESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPLL  213 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~---~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~l  213 (221)
                      |.+.+.||+|+||.||++...   .+..+|+|.+....   ......+.+|+.++.+++||||+++++.+...  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            556788999999999999953   47899999886522   33346788999999999999999999999887  78999


Q ss_pred             EEEcccC
Q 036177          214 VYEFILN  220 (221)
Q Consensus       214 v~e~~~~  220 (221)
                      ||||+++
T Consensus        82 v~e~~~~   88 (316)
T cd07842          82 LFDYAEH   88 (316)
T ss_pred             EEeCCCc
Confidence            9999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.06  E-value=2.8e-10  Score=88.29  Aligned_cols=81  Identities=32%  Similarity=0.417  Sum_probs=68.9

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      .+.....||+|+||.||++.. .++..+|+|.+........+.+.+|+.+++.++||||+++++.+...+..+++|||++
T Consensus        23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~  102 (292)
T cd06658          23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE  102 (292)
T ss_pred             HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence            344456799999999999985 4678999998866555556779999999999999999999999999999999999998


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus       103 ~~  104 (292)
T cd06658         103 GG  104 (292)
T ss_pred             CC
Confidence            75

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.06  E-value=1.3e-09  Score=84.37  Aligned_cols=91  Identities=32%  Similarity=0.444  Sum_probs=73.2

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEe
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLE  207 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  207 (221)
                      +...++..+.++|...+.||+|+||.||++.. .++..+++|.+.... .....+.+|+.++.++ +|||++++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            34455666788899999999999999999985 568889999886532 2245678899999999 89999999999865


Q ss_pred             C-----CeeEEEEEcccCC
Q 036177          208 T-----EVPLLVYEFILNG  221 (221)
Q Consensus       208 ~-----~~~~lv~e~~~~G  221 (221)
                      .     ...++++||+++|
T Consensus        91 ~~~~~~~~~~lv~ey~~~~  109 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGG  109 (291)
T ss_pred             ccccCCCeeEEEEEECCCC
Confidence            3     3579999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.06  E-value=3.2e-10  Score=86.19  Aligned_cols=81  Identities=27%  Similarity=0.417  Sum_probs=68.8

Q ss_pred             CccccceecccCceEEEEEEeC-CCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|...+.||.|+||.||++... .+..+++|.+...   .....+.+.+|+.++++++||||+++++.+......++++|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            3667889999999999999864 5888999988642   22446789999999999999999999999988889999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        81 ~~~~~   85 (258)
T cd05578          81 LLLGG   85 (258)
T ss_pred             CCCCC
Confidence            99764

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.06  E-value=3.6e-10  Score=86.37  Aligned_cols=75  Identities=36%  Similarity=0.636  Sum_probs=62.8

Q ss_pred             eecccCceEEEEEEeCC-------CcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          147 IIGQGGQGTVFKGMLTD-------GRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       147 ~lg~G~fg~v~~~~~~~-------~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      .||+|+||.||++...+       +..+++|.+... .......|.+|+.+++.++||||+++++.+...+..+++|||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            68999999999998532       246899987542 2345678999999999999999999999999888999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (269)
T cd05044          82 EGG   84 (269)
T ss_pred             CCC
Confidence            875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.06  E-value=8.7e-10  Score=88.22  Aligned_cols=83  Identities=25%  Similarity=0.375  Sum_probs=67.4

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC------C
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLET------E  209 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~  209 (221)
                      .++|...+.||+|+||.||++.. ..+..+|+|.+..  ........+.+|+.+++.++||||+++++++...      .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            46688889999999999999984 4578899998864  2334456788999999999999999999987543      3


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..++||||++++
T Consensus       103 ~~~lv~e~~~~~  114 (364)
T cd07875         103 DVYIVMELMDAN  114 (364)
T ss_pred             eEEEEEeCCCCC
Confidence            579999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.06  E-value=8.6e-10  Score=83.84  Aligned_cols=74  Identities=31%  Similarity=0.490  Sum_probs=60.7

Q ss_pred             eecccCceEEEEEEe---CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          147 IIGQGGQGTVFKGML---TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       147 ~lg~G~fg~v~~~~~---~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .||+|+||.||+|.+   .++..+|+|.++..  .....++|.+|+.+++.++||||++++|.+. .+..+++|||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            589999999999975   34678999988642  2334568999999999999999999999874 45678999999875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.05  E-value=1.2e-09  Score=83.77  Aligned_cols=75  Identities=29%  Similarity=0.577  Sum_probs=62.5

Q ss_pred             eecccCceEEEEEEeCC-Cc--EEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          147 IIGQGGQGTVFKGMLTD-GR--IVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       147 ~lg~G~fg~v~~~~~~~-~~--~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .||+|+||.||++...+ +.  .+++|.++. ........+.+|+.++.++ +||||+++++.+...+..+++|||+++|
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG   81 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence            58999999999998643 33  468888765 3344456799999999999 8999999999999988999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.05  E-value=7.5e-10  Score=84.05  Aligned_cols=75  Identities=31%  Similarity=0.492  Sum_probs=63.1

Q ss_pred             ceecccCceEEEEEEeCC--C--cEEEEEeccCCCc-ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGMLTD--G--RIVAVKKSKSVHE-SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~--~--~~vavk~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|++|.||++.+..  +  ..+|+|.+..... ...+.|.+|+.++++++||||+++++.... ...++++||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            368999999999998633  2  3689999876444 556789999999999999999999999887 888999999986


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        80 ~   80 (257)
T cd05040          80 G   80 (257)
T ss_pred             C
Confidence            5

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.05  E-value=3.5e-10  Score=88.17  Aligned_cols=83  Identities=22%  Similarity=0.306  Sum_probs=70.4

Q ss_pred             ccCccccceecccCceEEEEEEeCC-CcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~-~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .+.|.+.+.||.|.-|.||.+.+.. +...|+|++..   .........+.|.++|+.++||-++.|++....+...+++
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~  155 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV  155 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence            3456778899999999999999744 47899999865   2233445677899999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus       156 meyCpGG  162 (459)
T KOG0610|consen  156 MEYCPGG  162 (459)
T ss_pred             EecCCCc
Confidence            9999998

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.05  E-value=1e-09  Score=91.21  Aligned_cols=86  Identities=26%  Similarity=0.383  Sum_probs=69.1

Q ss_pred             hhhccCccccceecccCceEEEEEE-eCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC---
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE---  209 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~---  209 (221)
                      ....++|.+.+.||+|+||.||++. ..++..+|+|.+..  .+......+.+|+..|..++|+||+++........   
T Consensus        28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~  107 (496)
T PTZ00283         28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN  107 (496)
T ss_pred             cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence            3445678889999999999999998 45789999998754  33445567899999999999999999887664322   


Q ss_pred             -----eeEEEEEcccCC
Q 036177          210 -----VPLLVYEFILNG  221 (221)
Q Consensus       210 -----~~~lv~e~~~~G  221 (221)
                           ..+++|||+++|
T Consensus       108 ~~~~~~i~lV~Ey~~~g  124 (496)
T PTZ00283        108 PENVLMIALVLDYANAG  124 (496)
T ss_pred             cccceEEEEEEeCCCCC
Confidence                 367999999876

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.05  E-value=1.3e-09  Score=85.49  Aligned_cols=81  Identities=23%  Similarity=0.403  Sum_probs=68.8

Q ss_pred             CccccceecccCceEEEEEEeC-CCcEEEEEeccCCCc---ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHE---SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +|...+.||+|+||.||++... .+..+++|.+.....   .....+.+|+.+++.++||||+++++........+++||
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            5677889999999999999854 488999998865322   245678999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~~~   86 (316)
T cd05574          82 YCPGG   86 (316)
T ss_pred             ecCCC
Confidence            98764

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.05  E-value=1.8e-09  Score=83.45  Aligned_cols=83  Identities=31%  Similarity=0.492  Sum_probs=71.4

Q ss_pred             hccCccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++++|...+.||+|.||.||++... ++..+++|.+..... ....+.+|+.+++.++|+|++++++.+...+..++++|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            4556777889999999999999964 578899998875443 45679999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        96 ~~~~~  100 (286)
T cd06614          96 YMDGG  100 (286)
T ss_pred             ccCCC
Confidence            99854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.05  E-value=6.8e-10  Score=84.65  Aligned_cols=81  Identities=25%  Similarity=0.358  Sum_probs=69.0

Q ss_pred             CccccceecccCceEEEEEEeC-CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +|+..+.||+|+||.||++... ++..+++|.+... .......+.+|+.++++++||||+++++.+...+..++++||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            4566788999999999999864 5888999988653 3344567999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      +++
T Consensus        82 ~~~   84 (265)
T cd06605          82 DGG   84 (265)
T ss_pred             CCC
Confidence            853

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.05  E-value=1.8e-09  Score=82.48  Aligned_cols=81  Identities=23%  Similarity=0.475  Sum_probs=65.4

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCCC-----cccHHHHHHHHHHHHcCCCCceeeeeeEEEe--CCeeE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH-----ESNVEQFINEVVILSQINHRNVVKLLGCCLE--TEVPL  212 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~  212 (221)
                      +|...+.||+|+||.||++.. ..+..+++|.+....     ......+.+|+.+++.++||||+++.+....  ....+
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            567788999999999999984 458899999875321     1234568899999999999999999998765  35678


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +++||+++|
T Consensus        83 l~~e~~~~~   91 (266)
T cd06651          83 IFMEYMPGG   91 (266)
T ss_pred             EEEeCCCCC
Confidence            999999764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.05  E-value=1.1e-09  Score=84.49  Aligned_cols=77  Identities=34%  Similarity=0.424  Sum_probs=66.7

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCCC--cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH--ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |++.+.||+|.||.||++.. .++..+++|.+....  ......+.+|+.++++++||||+++++........++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   81 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM   81 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence            56678999999999999985 468899999886532  334567999999999999999999999999889999999998

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.05  E-value=1e-09  Score=89.97  Aligned_cols=81  Identities=27%  Similarity=0.397  Sum_probs=63.5

Q ss_pred             hhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC-------
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLET-------  208 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-------  208 (221)
                      .+..+|.+.+.||+|+||.||++.. ..+..||+|.+....    ....+|+.+|+.++||||+++.+++...       
T Consensus        63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~  138 (440)
T PTZ00036         63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK  138 (440)
T ss_pred             CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence            3456788999999999999999985 467899999875422    2245799999999999999998876431       


Q ss_pred             -CeeEEEEEcccCC
Q 036177          209 -EVPLLVYEFILNG  221 (221)
Q Consensus       209 -~~~~lv~e~~~~G  221 (221)
                       ..++++|||++++
T Consensus       139 ~~~l~lvmE~~~~~  152 (440)
T PTZ00036        139 NIFLNVVMEFIPQT  152 (440)
T ss_pred             ceEEEEEEecCCcc
Confidence             2466999999753

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.05  E-value=9.3e-10  Score=85.40  Aligned_cols=77  Identities=34%  Similarity=0.498  Sum_probs=67.1

Q ss_pred             cceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          145 SRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ...||+|+||.||++.. .++..+++|.+..........+.+|+.+++.++|+||+++++.+...+..+++|||+++|
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  102 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG  102 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence            45799999999999985 568899999886544455667999999999999999999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.04  E-value=4.8e-10  Score=85.15  Aligned_cols=80  Identities=31%  Similarity=0.526  Sum_probs=65.9

Q ss_pred             ccccceecccCceEEEEEEeC-CCcEEEEEeccCCCccc--HHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESN--VEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |++.+.||+|+||.||++... ++..+|+|.+.......  .....+|+.++.+++||||++++++.......+++|||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            345789999999999999954 46689999987644332  223566999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        81 ~~~   83 (260)
T PF00069_consen   81 PGG   83 (260)
T ss_dssp             TTE
T ss_pred             ccc
Confidence            763

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.04  E-value=1.8e-09  Score=82.39  Aligned_cols=82  Identities=23%  Similarity=0.462  Sum_probs=66.4

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC-----CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--Cee
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-----HESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVP  211 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~  211 (221)
                      .+|.+.+.||+|+||.||++.. .++..+++|.+...     .......|.+|+.++++++||||+++++.....  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4577889999999999999984 45889999986421     223446789999999999999999999987654  457


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++++||+++|
T Consensus        82 ~~v~e~~~~~   91 (264)
T cd06653          82 SIFVEYMPGG   91 (264)
T ss_pred             EEEEEeCCCC
Confidence            8999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.03  E-value=1.6e-09  Score=82.84  Aligned_cols=80  Identities=24%  Similarity=0.454  Sum_probs=64.7

Q ss_pred             ccccceecccCceEEEEEEeCC--CcEEEEEeccCC----------CcccHHHHHHHHHHHHc-CCCCceeeeeeEEEeC
Q 036177          142 YKVSRIIGQGGQGTVFKGMLTD--GRIVAVKKSKSV----------HESNVEQFINEVVILSQ-INHRNVVKLLGCCLET  208 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~~--~~~vavk~~~~~----------~~~~~~~~~~e~~~l~~-l~h~niv~l~g~~~~~  208 (221)
                      |+..+.||+|+||.||++....  +..+|+|.+...          .......+.+|+.++.+ ++||||+++++.+...
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            5667889999999999999644  678999976431          12234567889988875 6999999999999999


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      +..+++|||+++|
T Consensus        82 ~~~~lv~e~~~~~   94 (269)
T cd08528          82 DRLYIVMDLIEGA   94 (269)
T ss_pred             CeEEEEEecCCCC
Confidence            9999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.03  E-value=7.1e-10  Score=84.14  Aligned_cols=78  Identities=32%  Similarity=0.600  Sum_probs=65.1

Q ss_pred             cCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      .+|.+.+.||+|+||.||++.. .+..+++|..+...  ....|.+|+.++++++|||++++++..... ..+++|||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence            4567788999999999999986 67789999886432  346799999999999999999999987654 5799999998


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus        82 ~~   83 (254)
T cd05083          82 KG   83 (254)
T ss_pred             CC
Confidence            65

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.03  E-value=8.3e-10  Score=88.02  Aligned_cols=83  Identities=27%  Similarity=0.390  Sum_probs=67.1

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC------C
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLET------E  209 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~  209 (221)
                      .++|...+.||+|+||.||++.. ..+..+|+|.+...  .......+.+|+.+++.++||||+++++++...      .
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   95 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ   95 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence            46788889999999999999984 45788999988642  333456788999999999999999999987643      2


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..+++|||++++
T Consensus        96 ~~~lv~e~~~~~  107 (355)
T cd07874          96 DVYLVMELMDAN  107 (355)
T ss_pred             eeEEEhhhhccc
Confidence            468999998753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.03  E-value=4.6e-11  Score=89.80  Aligned_cols=80  Identities=25%  Similarity=0.506  Sum_probs=70.3

Q ss_pred             cCccccceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +-|.+..+||+|+||.||++. ...|..+|+|.+..  ..+.++...|+.+|.+.+.|++|+++|.+.....+||||||+
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC  110 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC  110 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence            446778899999999999997 56799999998764  345788999999999999999999999999999999999998


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      --|
T Consensus       111 GAG  113 (502)
T KOG0574|consen  111 GAG  113 (502)
T ss_pred             CCC
Confidence            654

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.03  E-value=1.8e-09  Score=91.31  Aligned_cols=91  Identities=26%  Similarity=0.468  Sum_probs=74.2

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEe
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLE  207 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  207 (221)
                      ..++.+..+.+-+.+.++||.|.+|.||+++ ..+++.+|+|++..... ..++...|..+++.. +|||++.++|++..
T Consensus         9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k   87 (953)
T KOG0587|consen    9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIK   87 (953)
T ss_pred             cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence            3445556677778889999999999999998 66789999998876333 235677888888888 89999999999864


Q ss_pred             -----CCeeEEEEEcccCC
Q 036177          208 -----TEVPLLVYEFILNG  221 (221)
Q Consensus       208 -----~~~~~lv~e~~~~G  221 (221)
                           ++.+||||||+.+|
T Consensus        88 ~~~~~~DqLWLVMEfC~gG  106 (953)
T KOG0587|consen   88 KDPGNGDQLWLVMEFCGGG  106 (953)
T ss_pred             ecCCCCCeEEEEeeccCCc
Confidence                 46899999999887

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.02  E-value=1.7e-09  Score=83.12  Aligned_cols=74  Identities=26%  Similarity=0.360  Sum_probs=61.9

Q ss_pred             ecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          148 IGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       148 lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ||+|+||.||++.. .++..+++|.+...   .......+.+|+++|+.++||||+++.+.+...+..++++||+++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGG   78 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCC
Confidence            68999999999984 46889999987542   2223456789999999999999999999998888999999999865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.02  E-value=1.5e-09  Score=85.21  Aligned_cols=76  Identities=26%  Similarity=0.358  Sum_probs=62.6

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++.. .++..+|+|.++..   .......+..|..++... +||||+++++.+...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            3689999999999985 45789999988642   223455677888888765 899999999999999999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 g   81 (316)
T cd05620          81 G   81 (316)
T ss_pred             C
Confidence            5

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.02  E-value=1.6e-09  Score=82.20  Aligned_cols=76  Identities=37%  Similarity=0.629  Sum_probs=65.1

Q ss_pred             ceecccCceEEEEEEeCC----CcEEEEEeccCCCcc-cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGMLTD----GRIVAVKKSKSVHES-NVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~----~~~vavk~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++....    +..+++|.++..... ....+.+|+..+..++|+||+++++.+......++++||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            368999999999998643    778999998763333 367899999999999999999999999988899999999976


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 ~   81 (262)
T cd00192          81 G   81 (262)
T ss_pred             C
Confidence            5

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.02  E-value=3.1e-09  Score=80.34  Aligned_cols=80  Identities=28%  Similarity=0.571  Sum_probs=68.6

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc--ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE--SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |+..+.||+|.+|.||++.. ..+..+++|.+.....  .....+.+|++++.+++|||++++++.....+..++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA   81 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence            56678999999999999985 4578899998876433  45678999999999999999999999998889999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      +++
T Consensus        82 ~~~   84 (254)
T cd06627          82 ENG   84 (254)
T ss_pred             CCC
Confidence            764

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.02  E-value=1.4e-09  Score=82.81  Aligned_cols=76  Identities=38%  Similarity=0.669  Sum_probs=61.2

Q ss_pred             ceecccCceEEEEEEeC----CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe-CCeeEEEEEccc
Q 036177          146 RIIGQGGQGTVFKGMLT----DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLE-TEVPLLVYEFIL  219 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~----~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~~~lv~e~~~  219 (221)
                      +.||+|+||.||++...    ....+|+|.+.. ........|.+|+.+++.++||||+++++.+.. .+..++++||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            36899999999999852    235699998754 334456789999999999999999999998764 456789999998


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus        81 ~~   82 (262)
T cd05058          81 HG   82 (262)
T ss_pred             CC
Confidence            75

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.02  E-value=1.5e-09  Score=85.45  Aligned_cols=76  Identities=21%  Similarity=0.348  Sum_probs=59.4

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHH-HHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVV-ILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~-~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++.. .++..+|+|.+...   .......+..|.. +++.++||||+++++.+...+..+++|||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            3689999999999985 45778999987542   1222334555544 56788999999999999999999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 ~   81 (325)
T cd05602          81 G   81 (325)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.01  E-value=1.7e-09  Score=83.28  Aligned_cols=81  Identities=28%  Similarity=0.547  Sum_probs=65.6

Q ss_pred             cCccccceecccCceEEEEEEe-CCCc----EEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGR----IVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~----~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      .+|...+.||+|+||.||++.+ .++.    .||+|.++. ........+.+|+.++..++||||+++++.+.. ...++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence            4567788999999999999984 3444    489998865 334445679999999999999999999998865 45679


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ++||+++|
T Consensus        86 ~~~~~~~g   93 (279)
T cd05109          86 VTQLMPYG   93 (279)
T ss_pred             EEEcCCCC
Confidence            99999876

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.01  E-value=2.3e-09  Score=82.06  Aligned_cols=84  Identities=27%  Similarity=0.474  Sum_probs=69.3

Q ss_pred             hhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCC-----
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETE-----  209 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~-----  209 (221)
                      .+.++|.+.+.||+|+||.||++.. .++..+++|.+..... ....|.+|+.+++++ .||||+++++.+....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            3567788899999999999999996 3577899998765332 346799999999999 7999999999987654     


Q ss_pred             -eeEEEEEcccCC
Q 036177          210 -VPLLVYEFILNG  221 (221)
Q Consensus       210 -~~~lv~e~~~~G  221 (221)
                       ..+++|||+++|
T Consensus        82 ~~~~lv~e~~~~~   94 (275)
T cd06608          82 DQLWLVMELCGGG   94 (275)
T ss_pred             eEEEEEEEcCCCC
Confidence             379999999864

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.01  E-value=5e-10  Score=89.09  Aligned_cols=82  Identities=28%  Similarity=0.410  Sum_probs=68.1

Q ss_pred             cCccccceecccCceEEEEEE-eCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe-eEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV-PLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~-~~lv~  215 (221)
                      ++|...+.+|+|+||.++... ..++..+++|.+.-  .+...++...+|+.++++++|||||.+...+...+. ++|+|
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            456678899999999988665 33667899998754  344445678999999999999999999999988776 99999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      +|+++|
T Consensus        84 ~Y~eGg   89 (426)
T KOG0589|consen   84 EYCEGG   89 (426)
T ss_pred             eecCCC
Confidence            999987

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.01  E-value=1.9e-09  Score=83.02  Aligned_cols=89  Identities=25%  Similarity=0.459  Sum_probs=70.6

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEe--
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLE--  207 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~--  207 (221)
                      +.++..+.+.|+..+.||+|+||.||++.. ..+..+|+|...... .....+..|+.++.++ +||||+++++.+..  
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~   86 (282)
T cd06636           8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS   86 (282)
T ss_pred             hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence            344455667788889999999999999985 567889999875432 3345688999999998 79999999998753  


Q ss_pred             ----CCeeEEEEEcccCC
Q 036177          208 ----TEVPLLVYEFILNG  221 (221)
Q Consensus       208 ----~~~~~lv~e~~~~G  221 (221)
                          .+..+++|||+++|
T Consensus        87 ~~~~~~~~~iv~e~~~~~  104 (282)
T cd06636          87 PPGHDDQLWLVMEFCGAG  104 (282)
T ss_pred             ccCCCCEEEEEEEeCCCC
Confidence                34679999999865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.01  E-value=7.9e-10  Score=85.24  Aligned_cols=79  Identities=29%  Similarity=0.454  Sum_probs=66.3

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |...+.||+|.||.||++.. .+|..+++|.++..  .......+.+|+.++++++||||++++++.......++++||+
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            55678899999999999985 46889999987542  2223456889999999999999999999998888999999998


Q ss_pred             cC
Q 036177          219 LN  220 (221)
Q Consensus       219 ~~  220 (221)
                      ++
T Consensus        82 ~~   83 (284)
T cd07839          82 DQ   83 (284)
T ss_pred             CC
Confidence            64

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.01  E-value=2e-09  Score=83.48  Aligned_cols=80  Identities=28%  Similarity=0.425  Sum_probs=65.1

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCe-----e
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEV-----P  211 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~-----~  211 (221)
                      +|+..+.||+|+||.||++.. .++..||+|..+..  .......+.+|+.+++.+ +||||++++++....+.     .
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            567788999999999999985 46889999987542  222345788999999999 56999999998876554     7


Q ss_pred             EEEEEcccC
Q 036177          212 LLVYEFILN  220 (221)
Q Consensus       212 ~lv~e~~~~  220 (221)
                      +++|||+++
T Consensus        82 ~lv~e~~~~   90 (295)
T cd07837          82 YLVFEYLDS   90 (295)
T ss_pred             EEEeeccCc
Confidence            999999974

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.00  E-value=4.1e-09  Score=79.73  Aligned_cols=80  Identities=25%  Similarity=0.487  Sum_probs=68.1

Q ss_pred             ccccceecccCceEEEEEEeC-CCcEEEEEeccCCC--cccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--CeeEEEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH--ESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPLLVYE  216 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e  216 (221)
                      |+..+.||+|++|.||++... ++..+++|.+....  ....+.+.+|+..+++++||||+++++.....  ...++++|
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence            556788999999999999964 68899999876533  24567899999999999999999999999887  78999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |++++
T Consensus        82 ~~~~~   86 (260)
T cd06606          82 YVSGG   86 (260)
T ss_pred             ecCCC
Confidence            98754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.00  E-value=6.3e-10  Score=89.49  Aligned_cols=84  Identities=27%  Similarity=0.424  Sum_probs=71.2

Q ss_pred             hccCccccceecccCceEEEEEE-eCCCcEEEEEeccC---CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS---VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  212 (221)
                      ...+|.+.+.||+|+|++|++++ ...+..+|||++..   ..+....-..+|-.+|..| .||.|++|+--+.+...+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            44678889999999999999998 55688999998754   2333344567888999999 8999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +|+||+++|
T Consensus       151 FvLe~A~nG  159 (604)
T KOG0592|consen  151 FVLEYAPNG  159 (604)
T ss_pred             EEEEecCCC
Confidence            999999998

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.00  E-value=2.2e-09  Score=82.69  Aligned_cols=78  Identities=27%  Similarity=0.407  Sum_probs=66.1

Q ss_pred             cccceecccCceEEEEEEeC-CCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--CeeEEEEEc
Q 036177          143 KVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPLLVYEF  217 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv~e~  217 (221)
                      +..+.||+|+||.||++... .+..+++|.+...  .......+.+|+.+++.++|||++++++++...  +..++++||
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~   81 (287)
T cd07840           2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY   81 (287)
T ss_pred             eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence            45678999999999999864 5788999998753  334456789999999999999999999999887  789999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus        82 ~~~   84 (287)
T cd07840          82 MDH   84 (287)
T ss_pred             ccc
Confidence            874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.00  E-value=2.5e-09  Score=84.36  Aligned_cols=82  Identities=23%  Similarity=0.284  Sum_probs=67.6

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe-CCeeEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLE-TEVPLL  213 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~~~l  213 (221)
                      ..++|+..+.||+|+||.||++.. .++..+|+|.+..  ........+.+|+.++..++||||+++.+.+.. .+..++
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l   87 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF   87 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence            456788899999999999999984 4788999998753  223345678899999999999999999998865 557889


Q ss_pred             EEEccc
Q 036177          214 VYEFIL  219 (221)
Q Consensus       214 v~e~~~  219 (221)
                      ++||+.
T Consensus        88 v~e~~~   93 (328)
T cd07856          88 VTELLG   93 (328)
T ss_pred             Eeehhc
Confidence            999985

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.00  E-value=2.9e-09  Score=82.30  Aligned_cols=80  Identities=33%  Similarity=0.430  Sum_probs=68.0

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +...+.||+|++|.||++.. .++..+++|.++.......+.+.+|+.+++.++||||+++++.....+..++++||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            33456899999999999984 46788999988654445556789999999999999999999999888999999999986


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus       101 ~  101 (285)
T cd06648         101 G  101 (285)
T ss_pred             C
Confidence            4

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.00  E-value=1.9e-09  Score=83.52  Aligned_cols=81  Identities=27%  Similarity=0.401  Sum_probs=66.5

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCC--cccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--CeeEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH--ESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPLLV  214 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~lv  214 (221)
                      ++|...+.||+|.||.||++... ++..+++|.++...  ......+.+|+.++.+++||||+++.+++...  +..+++
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            35677889999999999999964 57889999886422  22234578899999999999999999998777  789999


Q ss_pred             EEcccC
Q 036177          215 YEFILN  220 (221)
Q Consensus       215 ~e~~~~  220 (221)
                      +||+++
T Consensus        85 ~e~~~~   90 (293)
T cd07843          85 MEYVEH   90 (293)
T ss_pred             ehhcCc
Confidence            999863

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.00  E-value=3.3e-09  Score=82.02  Aligned_cols=80  Identities=34%  Similarity=0.523  Sum_probs=60.8

Q ss_pred             CccccceecccCceEEEEEEe-C-CCcEEEEEeccCC--CcccHHHHHHHHHHHHcC---CCCceeeeeeEEEe-----C
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-T-DGRIVAVKKSKSV--HESNVEQFINEVVILSQI---NHRNVVKLLGCCLE-----T  208 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~-~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~~-----~  208 (221)
                      +|.+.+.||+|+||.||++.. . .+..+|+|.++..  .......+.+|+.++..+   +||||+++++++..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            467788999999999999985 2 4678999987642  223345577788777665   69999999998853     3


Q ss_pred             CeeEEEEEcccC
Q 036177          209 EVPLLVYEFILN  220 (221)
Q Consensus       209 ~~~~lv~e~~~~  220 (221)
                      ...++++||+++
T Consensus        82 ~~~~lv~e~~~~   93 (290)
T cd07862          82 TKLTLVFEHVDQ   93 (290)
T ss_pred             CcEEEEEccCCC
Confidence            457899999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.00  E-value=5.2e-09  Score=78.84  Aligned_cols=80  Identities=35%  Similarity=0.563  Sum_probs=69.8

Q ss_pred             ccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      |...+.||+|.+|.||++... ++..+++|.++.........+.+|+.+++.++|||++++++.+...+..++++||+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            455788999999999999964 6888999998765545667899999999999999999999999988999999999985


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      +
T Consensus        82 ~   82 (253)
T cd05122          82 G   82 (253)
T ss_pred             C
Confidence            4

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.99  E-value=1.8e-09  Score=83.24  Aligned_cols=81  Identities=25%  Similarity=0.465  Sum_probs=62.6

Q ss_pred             cCccccceecccCceEEEEEEeC-CCc----EEEEEeccCCC-cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGR----IVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~----~vavk~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      .+|...+.||+|+||.||++.+. ++.    .+++|.+.... .....++..|+..+++++||||++++|++. ....++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence            34666789999999999999853 344    47778775432 233467888888999999999999999875 445789


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ++||+++|
T Consensus        86 i~e~~~~g   93 (279)
T cd05111          86 VTQLSPLG   93 (279)
T ss_pred             EEEeCCCC
Confidence            99999876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.99  E-value=1.2e-11  Score=90.32  Aligned_cols=82  Identities=26%  Similarity=0.426  Sum_probs=70.6

Q ss_pred             cCccccceecccCceEEEEEE-eCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++|++.++||+|.|+.|++.. .+.|+..|+|.+.-  .+....+++.+|+.+-+.|+|||||+|.....+....+||+|
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            456778899999999999887 56788888887643  455567889999999999999999999999888899999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      +|.+|
T Consensus        91 ~m~G~   95 (355)
T KOG0033|consen   91 LVTGG   95 (355)
T ss_pred             cccch
Confidence            99876

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.99  E-value=2.3e-09  Score=84.60  Aligned_cols=76  Identities=21%  Similarity=0.308  Sum_probs=63.1

Q ss_pred             ceeccc--CceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQG--GQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G--~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      ..||+|  +|++||.+.. ..+..||+|.+...  .....+.+.+|+.+++.++||||+++++++...+..++++||+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            356666  9999999985 57899999987642  233456789999999999999999999999999999999999986


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        84 ~   84 (328)
T cd08226          84 G   84 (328)
T ss_pred             C
Confidence            5

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.98  E-value=8.7e-10  Score=85.73  Aligned_cols=88  Identities=22%  Similarity=0.416  Sum_probs=71.8

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeCC------CcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEE
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTD------GRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCC  205 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~------~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~  205 (221)
                      .++...+.++.+..++.+|.||.||+|.|.+      .+.|.+|.++. +++-+...|+.|..++..+.|||+.+..|++
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            4556677788899999999999999997643      34578888765 5666678899999999999999999999998


Q ss_pred             Ee-CCeeEEEEEcccC
Q 036177          206 LE-TEVPLLVYEFILN  220 (221)
Q Consensus       206 ~~-~~~~~lv~e~~~~  220 (221)
                      .. ...+++++.++.-
T Consensus       357 ie~~~~P~V~y~~~~~  372 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGV  372 (563)
T ss_pred             eeccCcceEEEeccCc
Confidence            76 4578888887753

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.98  E-value=2.5e-09  Score=81.92  Aligned_cols=79  Identities=32%  Similarity=0.632  Sum_probs=62.5

Q ss_pred             cccceecccCceEEEEEEeC----CCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC------e
Q 036177          143 KVSRIIGQGGQGTVFKGMLT----DGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE------V  210 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~~----~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------~  210 (221)
                      .+.+.||+|+||.||++.+.    .+..+|+|.+..  ......+++.+|+.+|++++||||++++++....+      .
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   81 (273)
T cd05074           2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI   81 (273)
T ss_pred             cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence            45678999999999999853    357899998764  23344667999999999999999999999876532      2


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++++||+++|
T Consensus        82 ~~~~~~~~~~~   92 (273)
T cd05074          82 PMVILPFMKHG   92 (273)
T ss_pred             eEEEEecCCCC
Confidence            47888998765

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.98  E-value=3e-09  Score=80.88  Aligned_cols=80  Identities=31%  Similarity=0.511  Sum_probs=65.2

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe--CCeeEEEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLE--TEVPLLVYE  216 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv~e  216 (221)
                      |...+.||+|+||.||++.. .++..+++|.++.  ......+.+.+|+.++++++||||+++++....  ....++++|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence            55678899999999999984 4678899998764  334445678999999999999999999997754  346789999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        82 ~~~~~   86 (265)
T cd08217          82 YCEGG   86 (265)
T ss_pred             hccCC
Confidence            99865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.98  E-value=4.4e-09  Score=82.42  Aligned_cols=79  Identities=30%  Similarity=0.480  Sum_probs=65.7

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      +...+.||+|+||.||++.. ..+..+++|.+...   .......+.+|+.+++.++|||++++.+++...+..+++|||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            44467799999999999985 46788999987542   223345688999999999999999999999999999999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus       103 ~~~  105 (313)
T cd06633         103 CLG  105 (313)
T ss_pred             CCC
Confidence            864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.97  E-value=3.5e-09  Score=80.67  Aligned_cols=74  Identities=30%  Similarity=0.406  Sum_probs=63.0

Q ss_pred             ecccCceEEEEEEeC-CCcEEEEEeccCCC---cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          148 IGQGGQGTVFKGMLT-DGRIVAVKKSKSVH---ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       148 lg~G~fg~v~~~~~~-~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ||.|+||.||++... .+..+++|.+....   ....+.+.+|+.+++.++||||+++++.+...+..++++||+++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGG   78 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCC
Confidence            689999999999963 48899999876422   234467999999999999999999999998889999999999865

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.97  E-value=3.5e-09  Score=82.60  Aligned_cols=82  Identities=34%  Similarity=0.451  Sum_probs=65.1

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe-----
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEV-----  210 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~-----  210 (221)
                      .++|...+.||+|+||.||++.. .++..+|+|.+...  .......+.+|+.++++++||||+++++++...+.     
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            34677889999999999999985 46889999987542  22223456789999999999999999998876543     


Q ss_pred             ---eEEEEEcccC
Q 036177          211 ---PLLVYEFILN  220 (221)
Q Consensus       211 ---~~lv~e~~~~  220 (221)
                         .++++||+.+
T Consensus        91 ~~~~~lv~e~~~~  103 (310)
T cd07865          91 KGSFYLVFEFCEH  103 (310)
T ss_pred             CceEEEEEcCCCc
Confidence               4899999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.97  E-value=2.4e-09  Score=82.77  Aligned_cols=79  Identities=25%  Similarity=0.355  Sum_probs=65.7

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCC-CCceeeeeeEEEeCCeeEEEEEc
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++.....||+|+||.||++.. ..+..+|+|.+.. ........+.+|+.++.++. ||||+++++.....+..+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            445567899999999999984 4578999998764 22344567899999999995 99999999999888889999999


Q ss_pred             cc
Q 036177          218 IL  219 (221)
Q Consensus       218 ~~  219 (221)
                      ++
T Consensus        85 ~~   86 (288)
T cd06616          85 MD   86 (288)
T ss_pred             cc
Confidence            75

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.97  E-value=4.1e-09  Score=80.10  Aligned_cols=75  Identities=33%  Similarity=0.549  Sum_probs=60.6

Q ss_pred             ceecccCceEEEEEEeCC----CcEEEEEeccCCCc-ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGMLTD----GRIVAVKKSKSVHE-SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~----~~~vavk~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||+|.+..    +..+++|.++.... ...+++.+|+.+|+.++||||+++++.+. .+..+++|||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            368999999999997522    26799998875333 34567999999999999999999999765 4567999999986


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        80 ~   80 (257)
T cd05060          80 G   80 (257)
T ss_pred             C
Confidence            5

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.97  E-value=3.9e-11  Score=98.36  Aligned_cols=79  Identities=25%  Similarity=0.419  Sum_probs=69.3

Q ss_pred             cccceecccCceEEEEEEeCC-CcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          143 KVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~~~-~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .+.-.||.|+||.||++..+. +...|.|.+...+....++|+-|+++|+..+||+||+|++.+...+.+||+.||+.+|
T Consensus        35 eIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GG  114 (1187)
T KOG0579|consen   35 EIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGG  114 (1187)
T ss_pred             HHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCc
Confidence            335679999999999998543 4556788887777888899999999999999999999999999999999999999987

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.97  E-value=3.6e-09  Score=81.90  Aligned_cols=80  Identities=23%  Similarity=0.340  Sum_probs=66.5

Q ss_pred             ccccceecccCceEEEEEEe----CCCcEEEEEeccCCC----cccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeE
Q 036177          142 YKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSVH----ESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~----~~~~~vavk~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  212 (221)
                      |++.+.||+|+||.||.+..    .++..+|+|.++...    ....+.+.+|+.++.++ +|+||+++.+.+......+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            56678999999999999874    367889999886422    22346688999999999 6999999999988888899


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +++||+++|
T Consensus        82 lv~e~~~~~   90 (290)
T cd05613          82 LILDYINGG   90 (290)
T ss_pred             EEEecCCCC
Confidence            999999875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.97  E-value=4.8e-09  Score=82.18  Aligned_cols=74  Identities=22%  Similarity=0.354  Sum_probs=59.8

Q ss_pred             cceecccCceEEEEEEeC---CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe--CCeeEEEEEccc
Q 036177          145 SRIIGQGGQGTVFKGMLT---DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE--TEVPLLVYEFIL  219 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~---~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv~e~~~  219 (221)
                      ...||+|+||.||++...   .+..+|+|.+....  ....+.+|+.+|++++||||+++.+++..  ....++++||++
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            357999999999999854   34679999886532  23468899999999999999999998854  456789999986


Q ss_pred             C
Q 036177          220 N  220 (221)
Q Consensus       220 ~  220 (221)
                      +
T Consensus        84 ~   84 (317)
T cd07867          84 H   84 (317)
T ss_pred             C
Confidence            5

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.97  E-value=3.3e-09  Score=83.89  Aligned_cols=77  Identities=30%  Similarity=0.424  Sum_probs=63.4

Q ss_pred             ccceecccCceEEEEEEe-CCCcEEEEEeccCCCccc--------------HHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          144 VSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESN--------------VEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       144 ~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      +.+.||+|+||.||++.. ..+..+|+|.++......              ...+.+|+.+++.++||||+++++++...
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   92 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG   92 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence            457899999999999984 468899999875422111              12578999999999999999999999999


Q ss_pred             CeeEEEEEcccC
Q 036177          209 EVPLLVYEFILN  220 (221)
Q Consensus       209 ~~~~lv~e~~~~  220 (221)
                      +..+++|||+++
T Consensus        93 ~~~~lv~e~~~~  104 (335)
T PTZ00024         93 DFINLVMDIMAS  104 (335)
T ss_pred             CcEEEEEecccc
Confidence            999999999864

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.96  E-value=1.3e-09  Score=83.59  Aligned_cols=81  Identities=27%  Similarity=0.402  Sum_probs=68.5

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCC-CCceeeeeeEEEeCCeeEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~  215 (221)
                      +|.+.+.||+|+||.||++.. .++..+++|.+..   ........+.+|..++.+++ ||||+++++.+...+..+++|
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL   81 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence            567788999999999999985 4688999998754   22333567899999999998 999999999998888999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        82 e~~~~~   87 (280)
T cd05581          82 EYAPNG   87 (280)
T ss_pred             cCCCCC
Confidence            999764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.96  E-value=3.8e-09  Score=82.52  Aligned_cols=82  Identities=26%  Similarity=0.408  Sum_probs=65.8

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCC--cccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--CeeEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH--ESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPLL  213 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~l  213 (221)
                      .++|...+.||+|+||.||++.. .++..||+|.++...  ......+.+|+.++.+++|+||+++++.....  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            45677889999999999999995 458899999876422  22234567899999999999999999988654  46899


Q ss_pred             EEEcccC
Q 036177          214 VYEFILN  220 (221)
Q Consensus       214 v~e~~~~  220 (221)
                      |+||+.+
T Consensus        86 v~e~~~~   92 (309)
T cd07845          86 VMEYCEQ   92 (309)
T ss_pred             EEecCCC
Confidence            9999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.96  E-value=3.7e-09  Score=86.92  Aligned_cols=74  Identities=22%  Similarity=0.285  Sum_probs=63.3

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      .+|.+...||+|+||.||++... .+..||+|...      ...+.+|+.+|++++|||||++++++...+..+++||++
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~  242 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY  242 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence            35788899999999999999853 47789999532      234679999999999999999999999999999999987


Q ss_pred             c
Q 036177          219 L  219 (221)
Q Consensus       219 ~  219 (221)
                      .
T Consensus       243 ~  243 (461)
T PHA03211        243 R  243 (461)
T ss_pred             C
Confidence            5

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.96  E-value=3.2e-09  Score=81.82  Aligned_cols=77  Identities=34%  Similarity=0.490  Sum_probs=65.3

Q ss_pred             cccceecccCceEEEEEEe-CCCcEEEEEeccCCC--cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          143 KVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH--ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      +..+.||+|.+|.||++.. .++..+++|.+....  ......+.+|+..+++++|||++++++.+...+..++++||++
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~   81 (283)
T cd07835           2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD   81 (283)
T ss_pred             chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence            4567899999999999985 468899999876422  2334568899999999999999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.96  E-value=5.7e-09  Score=79.00  Aligned_cols=80  Identities=30%  Similarity=0.468  Sum_probs=68.6

Q ss_pred             ccccceecccCceEEEEEEeC-CCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |...+.||+|+||.||++... ++..+++|.+...  .......+.+|+++++.++|||++++.+.....+..++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~   81 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA   81 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence            566788999999999999953 5888999988653  3355677999999999999999999999998889999999998


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      +++
T Consensus        82 ~~~   84 (258)
T cd08215          82 DGG   84 (258)
T ss_pred             CCC
Confidence            764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.95  E-value=2.7e-09  Score=83.20  Aligned_cols=81  Identities=31%  Similarity=0.620  Sum_probs=63.6

Q ss_pred             cCccccceecccCceEEEEEEe-CCCc----EEEEEeccCCC-cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGR----IVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~----~vavk~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      ++|...+.||+|+||.||++.. .++.    .+|+|.+.... .....+|.+|+.+++.++||||++++|.+... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            3456678999999999999985 3343    47888876532 33345789999999999999999999988654 4678


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ++||+++|
T Consensus        86 v~e~~~~g   93 (303)
T cd05110          86 VTQLMPHG   93 (303)
T ss_pred             eehhcCCC
Confidence            99999876

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.95  E-value=1.9e-09  Score=88.97  Aligned_cols=85  Identities=20%  Similarity=0.399  Sum_probs=61.2

Q ss_pred             hhccCccccceecccCceEEEEEEe-----------------CCCcEEEEEeccCCCcccHHHH--------------HH
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-----------------TDGRIVAVKKSKSVHESNVEQF--------------IN  185 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-----------------~~~~~vavk~~~~~~~~~~~~~--------------~~  185 (221)
                      ...++|.+.++||+|+||.||+|.+                 ..++.||||.+........++|              ..
T Consensus       142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v  221 (507)
T PLN03224        142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV  221 (507)
T ss_pred             ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence            3567899999999999999999963                 2346799999865433333334              44


Q ss_pred             HHHHHHcCCCCce-----eeeeeEEEe--------CCeeEEEEEcccCC
Q 036177          186 EVVILSQINHRNV-----VKLLGCCLE--------TEVPLLVYEFILNG  221 (221)
Q Consensus       186 e~~~l~~l~h~ni-----v~l~g~~~~--------~~~~~lv~e~~~~G  221 (221)
                      |+.++.+++|.++     ++++|++..        .+..+|||||+++|
T Consensus       222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~g  270 (507)
T PLN03224        222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDA  270 (507)
T ss_pred             HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCC
Confidence            6677777766554     677777653        34689999999875

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.95  E-value=3e-09  Score=84.18  Aligned_cols=81  Identities=25%  Similarity=0.392  Sum_probs=66.1

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC-----CeeE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLET-----EVPL  212 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~~~  212 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.+... .......+.+|+.++++++||||+++++++...     ...+
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   84 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY   84 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence            5678889999999999999984 56889999988652 233346688999999999999999999887543     3578


Q ss_pred             EEEEcccC
Q 036177          213 LVYEFILN  220 (221)
Q Consensus       213 lv~e~~~~  220 (221)
                      +++||+++
T Consensus        85 lv~e~~~~   92 (336)
T cd07849          85 IVQELMET   92 (336)
T ss_pred             EEehhccc
Confidence            99999864

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.95  E-value=1.3e-09  Score=83.57  Aligned_cols=79  Identities=25%  Similarity=0.388  Sum_probs=65.6

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe-----CCeeE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLE-----TEVPL  212 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-----~~~~~  212 (221)
                      .+...+.||+|+||.|..+.. .+|..||+|++..  ......+.-+||+++|+.++|+||+.+..+...     -+..|
T Consensus        23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY  102 (359)
T KOG0660|consen   23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY  102 (359)
T ss_pred             eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence            344467899999999999984 5689999999863  445556778999999999999999999998766     24789


Q ss_pred             EEEEccc
Q 036177          213 LVYEFIL  219 (221)
Q Consensus       213 lv~e~~~  219 (221)
                      +|+|+|.
T Consensus       103 iV~elMe  109 (359)
T KOG0660|consen  103 LVFELME  109 (359)
T ss_pred             EehhHHh
Confidence            9999985

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.94  E-value=4.1e-09  Score=82.41  Aligned_cols=80  Identities=29%  Similarity=0.475  Sum_probs=66.3

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      .|+..+.||+|+||.||++.. .++..+++|.+..   ........+.+|+.+++.++|+|++++.+++......++++|
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            355577899999999999985 4578899998753   222334578899999999999999999999999999999999


Q ss_pred             cccC
Q 036177          217 FILN  220 (221)
Q Consensus       217 ~~~~  220 (221)
                      |+.+
T Consensus        96 ~~~~   99 (308)
T cd06634          96 YCLG   99 (308)
T ss_pred             ccCC
Confidence            9863

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.94  E-value=5.1e-09  Score=82.09  Aligned_cols=74  Identities=23%  Similarity=0.365  Sum_probs=59.6

Q ss_pred             cceecccCceEEEEEEeC---CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe--CCeeEEEEEccc
Q 036177          145 SRIIGQGGQGTVFKGMLT---DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE--TEVPLLVYEFIL  219 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~---~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv~e~~~  219 (221)
                      ...||+|+||.||++...   .+..+|+|.+....  ....+.+|+.+|++++||||+++++.+..  ....++++||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            457999999999999853   45789999886432  23457899999999999999999998754  346789999986


Q ss_pred             C
Q 036177          220 N  220 (221)
Q Consensus       220 ~  220 (221)
                      +
T Consensus        84 ~   84 (317)
T cd07868          84 H   84 (317)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.94  E-value=5.3e-09  Score=80.45  Aligned_cols=78  Identities=23%  Similarity=0.343  Sum_probs=62.9

Q ss_pred             cccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCC-CCceeeeeeEEEeC--CeeEEEEEc
Q 036177          143 KVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQIN-HRNVVKLLGCCLET--EVPLLVYEF  217 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~--~~~~lv~e~  217 (221)
                      +..+.||+|.||.||++.. .++..+|+|.++.. .........+|+..+.++. |||++++++.+...  +..++++||
T Consensus         2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence            4567899999999999984 46888999987652 2223345568999999994 99999999999877  789999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus        82 ~~~   84 (282)
T cd07831          82 MDM   84 (282)
T ss_pred             CCc
Confidence            864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.93  E-value=6.6e-09  Score=78.84  Aligned_cols=80  Identities=26%  Similarity=0.338  Sum_probs=64.9

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe-CCeeEEEEEc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLE-TEVPLLVYEF  217 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~~~lv~e~  217 (221)
                      |.+.+.||+|++|.||.+.. .++..+++|.+..  ......+.+.+|+.++++++|||++++.+.... ....++++||
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence            66788999999999999984 4577899998754  233445678999999999999999999987654 4467899999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        82 ~~~~   85 (257)
T cd08223          82 CEGG   85 (257)
T ss_pred             cCCC
Confidence            9865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.93  E-value=2.7e-09  Score=81.16  Aligned_cols=74  Identities=34%  Similarity=0.403  Sum_probs=63.4

Q ss_pred             ecccCceEEEEEEeC-CCcEEEEEeccCCCc---ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          148 IGQGGQGTVFKGMLT-DGRIVAVKKSKSVHE---SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       148 lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ||+|+||.||++... .+..+++|.+.....   .....+.+|+.++.+++||||+++++........++++||+++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGG   78 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCC
Confidence            589999999999965 488999998865322   44567999999999999999999999998888999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.93  E-value=3.6e-09  Score=82.15  Aligned_cols=85  Identities=16%  Similarity=0.312  Sum_probs=68.9

Q ss_pred             hhhccCccccceecccCceEEEEEEeCC-CcEEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeE
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~-~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  212 (221)
                      ....++|...+.||+|+||.||++.... +..+|+|.++.. ......++.+|+.++.+. .||||+++++.+......+
T Consensus        11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~   90 (296)
T cd06618          11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF   90 (296)
T ss_pred             cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence            3445667888999999999999999754 889999998653 233455677888877777 5999999999999999999


Q ss_pred             EEEEcccC
Q 036177          213 LVYEFILN  220 (221)
Q Consensus       213 lv~e~~~~  220 (221)
                      ++|||+++
T Consensus        91 ~v~e~~~~   98 (296)
T cd06618          91 ICMELMST   98 (296)
T ss_pred             EEeeccCc
Confidence            99999863

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.92  E-value=2e-10  Score=99.26  Aligned_cols=89  Identities=20%  Similarity=0.311  Sum_probs=76.2

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      .+++..+++|.+.++||+|+||.|...+. ..+..+|.|++..   .......-|..|-.+|..-+.++|+.|.-++-+.
T Consensus        68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~  147 (1317)
T KOG0612|consen   68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE  147 (1317)
T ss_pred             HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence            45566778899999999999999999884 4577889998865   3334456799999999999999999999999999


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      .++|+|||||+||
T Consensus       148 ~~LYlVMdY~pGG  160 (1317)
T KOG0612|consen  148 RYLYLVMDYMPGG  160 (1317)
T ss_pred             cceEEEEecccCc
Confidence            9999999999998

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.91  E-value=7.3e-09  Score=82.55  Aligned_cols=82  Identities=27%  Similarity=0.407  Sum_probs=66.6

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC------C
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLET------E  209 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~  209 (221)
                      .++|+..+.||+|+||.||++.. .++..+|+|.+..  ........+.+|+.+++.++||||+++++++...      .
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence            35678889999999999999984 4688999998754  2334456788999999999999999999987543      3


Q ss_pred             eeEEEEEcccC
Q 036177          210 VPLLVYEFILN  220 (221)
Q Consensus       210 ~~~lv~e~~~~  220 (221)
                      ..++|+||+.+
T Consensus        95 ~~~lv~e~~~~  105 (353)
T cd07850          95 DVYLVMELMDA  105 (353)
T ss_pred             cEEEEEeccCC
Confidence            46899999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.91  E-value=3.3e-09  Score=80.32  Aligned_cols=80  Identities=28%  Similarity=0.453  Sum_probs=67.5

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |++.+.||+|+||.||++.. .++..+++|.+...  .......+.+|+.++++++||||+++.+........++++||+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA   81 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence            56678999999999999974 46788999987642  3344567889999999999999999999988888999999998


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      +++
T Consensus        82 ~~~   84 (256)
T cd08530          82 PFG   84 (256)
T ss_pred             CCC
Confidence            764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.91  E-value=3.9e-09  Score=83.75  Aligned_cols=81  Identities=26%  Similarity=0.382  Sum_probs=66.8

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC----------
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLET----------  208 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~----------  208 (221)
                      .+|...+.||+|+||.||++.. ..+..|++|.+........+.+.+|+.++++++||||+++++.....          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            5677789999999999999985 46889999988665555567799999999999999999998765543          


Q ss_pred             ----CeeEEEEEcccC
Q 036177          209 ----EVPLLVYEFILN  220 (221)
Q Consensus       209 ----~~~~lv~e~~~~  220 (221)
                          ...++++||+++
T Consensus        85 ~~~~~~~~lv~e~~~~  100 (342)
T cd07854          85 LTELNSVYIVQEYMET  100 (342)
T ss_pred             ccccceEEEEeecccc
Confidence                357899999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.90  E-value=6.1e-09  Score=83.18  Aligned_cols=76  Identities=18%  Similarity=0.318  Sum_probs=63.9

Q ss_pred             ccCccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ..+|.+.+.||+|+||.||++... .+..||+|.....      ....|+.++++++||||+++++.+...+..++++||
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  138 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH  138 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence            356888999999999999999853 4678999975432      235799999999999999999999999999999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +.+
T Consensus       139 ~~~  141 (357)
T PHA03209        139 YSS  141 (357)
T ss_pred             cCC
Confidence            753

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.90  E-value=1.6e-09  Score=87.05  Aligned_cols=81  Identities=22%  Similarity=0.295  Sum_probs=68.1

Q ss_pred             CccccceecccCceEEEEEE-eCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      -|.+.+.||+|.|..|-.++ .-.|..||||++..  .+......++.|++-|+-++|||||+|+-+......+|||+|+
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence            35667899999999988776 33799999999865  4444456789999999999999999999999999999999998


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      =.+|
T Consensus        99 GD~G  102 (864)
T KOG4717|consen   99 GDGG  102 (864)
T ss_pred             cCCc
Confidence            6655

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.90  E-value=8e-09  Score=82.04  Aligned_cols=81  Identities=28%  Similarity=0.367  Sum_probs=65.0

Q ss_pred             ccCccccceecccCceEEEEEE-eCCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC------
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETE------  209 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------  209 (221)
                      .++|+..+.||+|+||.||++. ..++..||+|.+...  .......+.+|+.+|++++||||+++++++....      
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH   93 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence            4568888999999999999998 456889999987542  2223456889999999999999999999886543      


Q ss_pred             eeEEEEEccc
Q 036177          210 VPLLVYEFIL  219 (221)
Q Consensus       210 ~~~lv~e~~~  219 (221)
                      ..++++||+.
T Consensus        94 ~~~lv~e~~~  103 (343)
T cd07880          94 DFYLVMPFMG  103 (343)
T ss_pred             eEEEEEecCC
Confidence            3489999873

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.88  E-value=6.2e-09  Score=80.46  Aligned_cols=80  Identities=21%  Similarity=0.326  Sum_probs=65.6

Q ss_pred             ccccceecccCceEEEEEEe----CCCcEEEEEeccCCC----cccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeE
Q 036177          142 YKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSVH----ESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~----~~~~~vavk~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  212 (221)
                      |+..+.||+|+||.||++..    .++..+|+|.++...    ......+.+|+.++.++ +||||+++++........+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            56678999999999999874    246789999876421    22345688999999999 6999999999988888899


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus        82 lv~e~~~~~   90 (288)
T cd05583          82 LILDYVNGG   90 (288)
T ss_pred             EEEecCCCC
Confidence            999999875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.88  E-value=7.9e-09  Score=81.59  Aligned_cols=74  Identities=26%  Similarity=0.275  Sum_probs=59.0

Q ss_pred             ecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcC---CCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          148 IGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQI---NHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       148 lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      ||+|+||.||++.. ..+..+|+|.+...   .......+..|..++...   +||||+++...+...+..++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            69999999999984 45889999987531   222334566677777655   799999999999999999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        81 g   81 (330)
T cd05586          81 G   81 (330)
T ss_pred             C
Confidence            6

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.88  E-value=1.2e-08  Score=78.83  Aligned_cols=79  Identities=29%  Similarity=0.494  Sum_probs=59.6

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcC---CCCceeeeeeEEEeC-----Ce
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQI---NHRNVVKLLGCCLET-----EV  210 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~~~-----~~  210 (221)
                      |...+.||+|+||.||++.. .++..+|+|.++..  .......+.+|+.++..+   +||||+++++++...     ..
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            56678899999999999985 46889999987642  222234566777777655   799999999987542     35


Q ss_pred             eEEEEEcccC
Q 036177          211 PLLVYEFILN  220 (221)
Q Consensus       211 ~~lv~e~~~~  220 (221)
                      .++++||+++
T Consensus        82 ~~lv~e~~~~   91 (288)
T cd07863          82 VTLVFEHVDQ   91 (288)
T ss_pred             EEEEEccccc
Confidence            7899999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.88  E-value=2.9e-09  Score=80.98  Aligned_cols=80  Identities=23%  Similarity=0.294  Sum_probs=62.3

Q ss_pred             ccccceecccCceEEEEEEeC-CCcEEEEEeccC-----CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS-----VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~-----~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      |.+.+.||+|+||.||++... .+...++|.++.     ........+.+|+.++++++||||+++++.+...+..++++
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            566789999999999999853 334455555443     22333456778999999999999999999998888899999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||++++
T Consensus        82 e~~~~~   87 (260)
T cd08222          82 EYCEGR   87 (260)
T ss_pred             EeCCCC
Confidence            999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.87  E-value=1e-08  Score=81.38  Aligned_cols=80  Identities=25%  Similarity=0.382  Sum_probs=64.7

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC------e
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETE------V  210 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------~  210 (221)
                      .+|...+.||+|+||.||++.. .++..+|+|.+...  .......+.+|+.+++.++||||+++++++....      .
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            4677789999999999999984 46889999987642  2233456889999999999999999999876542      4


Q ss_pred             eEEEEEccc
Q 036177          211 PLLVYEFIL  219 (221)
Q Consensus       211 ~~lv~e~~~  219 (221)
                      .++++||+.
T Consensus        95 ~~lv~e~~~  103 (342)
T cd07879          95 FYLVMPYMQ  103 (342)
T ss_pred             EEEEecccc
Confidence            589999875

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.86  E-value=9.7e-10  Score=95.74  Aligned_cols=73  Identities=29%  Similarity=0.491  Sum_probs=60.3

Q ss_pred             hhccCccccceecccCceEEEEEE-eCCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      ....+|.....||+|+||.||+.+ .-+|+.+|||++.. .+........+|++.|++|+|||||+++..+....
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~  550 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVEST  550 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccC
Confidence            345667778899999999999998 34899999999865 34444567899999999999999999998876644

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.86  E-value=7.6e-09  Score=81.90  Aligned_cols=81  Identities=26%  Similarity=0.492  Sum_probs=65.4

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccC--CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeC--CeeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS--VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLET--EVPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~--~~~~l  213 (221)
                      ++|...+.||+|+||.||++... .+..+++|.+..  ........+.+|+.+++++ +||||+++++++...  ...++
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l   86 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL   86 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence            45777889999999999999854 578899998753  2333445688999999999 999999999987653  46799


Q ss_pred             EEEcccC
Q 036177          214 VYEFILN  220 (221)
Q Consensus       214 v~e~~~~  220 (221)
                      |+||+++
T Consensus        87 v~e~~~~   93 (337)
T cd07852          87 VFEYMET   93 (337)
T ss_pred             Eeccccc
Confidence            9999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.85  E-value=5.5e-09  Score=82.91  Aligned_cols=81  Identities=23%  Similarity=0.288  Sum_probs=64.2

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC------C
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLET------E  209 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~  209 (221)
                      .++|...+.||+|+||.||++.. ..+..||+|.+...  .......+.+|+.+|+.++||||+++++++...      .
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence            35678889999999999999984 46788999988642  223345688999999999999999999877532      3


Q ss_pred             eeEEEEEccc
Q 036177          210 VPLLVYEFIL  219 (221)
Q Consensus       210 ~~~lv~e~~~  219 (221)
                      ..++++|++.
T Consensus        94 ~~~~~~~~~~  103 (343)
T cd07878          94 EVYLVTNLMG  103 (343)
T ss_pred             cEEEEeecCC
Confidence            4689998863

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.85  E-value=9.7e-09  Score=81.32  Aligned_cols=81  Identities=22%  Similarity=0.368  Sum_probs=65.0

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC-----Cee
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLET-----EVP  211 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~~  211 (221)
                      ..|...+.||+|+||.||++.. .++..|++|.++..  .......+.+|+.+++.++||||+++++++...     ...
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~   84 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV   84 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence            3577788999999999999984 56889999987642  233345678999999999999999999987543     347


Q ss_pred             EEEEEcccC
Q 036177          212 LLVYEFILN  220 (221)
Q Consensus       212 ~lv~e~~~~  220 (221)
                      ++++||+.+
T Consensus        85 ~lv~e~~~~   93 (337)
T cd07858          85 YIVYELMDT   93 (337)
T ss_pred             EEEEeCCCC
Confidence            999999863

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.85  E-value=2.2e-08  Score=74.21  Aligned_cols=79  Identities=33%  Similarity=0.537  Sum_probs=68.2

Q ss_pred             cccceecccCceEEEEEEeCC-CcEEEEEeccCCCcc-cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          143 KVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHES-NVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~~~-~~~vavk~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      .+.+.||+|.+|.||++.... +..+++|........ ....+.+|+..+.+++|+|++++++........++++||+++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   81 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG   81 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence            456789999999999999754 788999998764444 567899999999999999999999999888889999999876


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        82 ~   82 (225)
T smart00221       82 G   82 (225)
T ss_pred             C
Confidence            4

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.85  E-value=6.2e-09  Score=80.15  Aligned_cols=78  Identities=32%  Similarity=0.461  Sum_probs=63.6

Q ss_pred             ccccceecccCceEEEEEEeC-CCcEEEEEeccCCC-cccHHHHHHHHHHHHcCC-CCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH-ESNVEQFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      |++.+.||+|+||.||+|... .+..+++|.+.... ........+|+..+++++ ||||+++++.+...+..+++|||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            345678999999999999964 47789999876522 222334567999999998 999999999999989999999998


Q ss_pred             c
Q 036177          219 L  219 (221)
Q Consensus       219 ~  219 (221)
                      .
T Consensus        81 ~   81 (283)
T cd07830          81 E   81 (283)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.85  E-value=9.2e-09  Score=80.24  Aligned_cols=82  Identities=27%  Similarity=0.432  Sum_probs=64.7

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCC--cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC------
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH--ESNVEQFINEVVILSQINHRNVVKLLGCCLETE------  209 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------  209 (221)
                      .++|.+.+.||+|+||.||++.. .++..+++|.+....  ......+.+|+.+++.++||||+++++......      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            35788889999999999999985 457889999875422  222346789999999999999999998875433      


Q ss_pred             --eeEEEEEcccC
Q 036177          210 --VPLLVYEFILN  220 (221)
Q Consensus       210 --~~~lv~e~~~~  220 (221)
                        ..++++||+..
T Consensus        87 ~~~~~lv~~~~~~   99 (311)
T cd07866          87 RGSVYMVTPYMDH   99 (311)
T ss_pred             CceEEEEEecCCc
Confidence              46899999864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.84  E-value=1.6e-08  Score=81.85  Aligned_cols=77  Identities=21%  Similarity=0.226  Sum_probs=64.0

Q ss_pred             ccCccccceecccCceEEEEEEeC---CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT---DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~---~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ..+|.+.+.||+|+||.||++...   .+..|++|.+...     ..+.+|+.+|++++||||+++++.+......+++|
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            356888999999999999999742   3567899987542     23568999999999999999999998888999999


Q ss_pred             EcccC
Q 036177          216 EFILN  220 (221)
Q Consensus       216 e~~~~  220 (221)
                      ||+.+
T Consensus       166 e~~~~  170 (392)
T PHA03207        166 PKYKC  170 (392)
T ss_pred             hhcCC
Confidence            98753

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.84  E-value=7.7e-09  Score=81.76  Aligned_cols=80  Identities=23%  Similarity=0.331  Sum_probs=65.0

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEe----CCeeE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLE----TEVPL  212 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~----~~~~~  212 (221)
                      ++|+..+.||+|+||.||++.. .++..+++|.+...  .......+.+|+.+|..++||||+++.+++..    ....+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   84 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY   84 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence            5677788999999999999984 46889999987642  22345678899999999999999999887653    34679


Q ss_pred             EEEEccc
Q 036177          213 LVYEFIL  219 (221)
Q Consensus       213 lv~e~~~  219 (221)
                      +++||+.
T Consensus        85 lv~e~~~   91 (334)
T cd07855          85 VVMDLME   91 (334)
T ss_pred             EEEehhh
Confidence            9999985

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.83  E-value=1.1e-09  Score=80.27  Aligned_cols=89  Identities=22%  Similarity=0.369  Sum_probs=75.1

Q ss_pred             hhhhhhccCccccceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC---
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLET---  208 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~---  208 (221)
                      +.+.+..++|.+.+.||+|+|..||.++ +.++..+|+|++......+.+..++|++..++++||||++++......   
T Consensus        14 ~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D   93 (302)
T KOG2345|consen   14 GTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD   93 (302)
T ss_pred             CcEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence            3344556778889999999999999998 778899999998876677788899999999999999999998876543   


Q ss_pred             --CeeEEEEEcccCC
Q 036177          209 --EVPLLVYEFILNG  221 (221)
Q Consensus       209 --~~~~lv~e~~~~G  221 (221)
                        ...||++.|...|
T Consensus        94 ~~~~~yll~Pyy~~G  108 (302)
T KOG2345|consen   94 GKHEAYLLLPYYKRG  108 (302)
T ss_pred             CceeEEEEeehhccc
Confidence              4589999998766

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.83  E-value=7e-09  Score=81.78  Aligned_cols=79  Identities=27%  Similarity=0.439  Sum_probs=66.4

Q ss_pred             ccccceecccCceEEEEEEeC-CCcEEEEEeccCCC--cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC-----eeEE
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH--ESNVEQFINEVVILSQINHRNVVKLLGCCLETE-----VPLL  213 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~l  213 (221)
                      |.+.+.||+|+||.||++... .+..+++|.+....  ....+.+.+|+.+++.++||||+++.+++....     ..++
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence            566789999999999999954 48899999886532  444567999999999999999999999987764     7899


Q ss_pred             EEEcccC
Q 036177          214 VYEFILN  220 (221)
Q Consensus       214 v~e~~~~  220 (221)
                      ++||+++
T Consensus        82 v~e~~~~   88 (330)
T cd07834          82 VTELMET   88 (330)
T ss_pred             Eecchhh
Confidence            9999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.81  E-value=2.1e-08  Score=79.70  Aligned_cols=84  Identities=24%  Similarity=0.328  Sum_probs=66.0

Q ss_pred             hhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC---
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLET---  208 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~---  208 (221)
                      +....++|...+.||+|+||.||++.. .++..||+|.+...  .....+.+.+|+.++.+++||||+++.+++...   
T Consensus        12 ~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~   91 (345)
T cd07877          12 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL   91 (345)
T ss_pred             HhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccc
Confidence            344557788899999999999999984 56889999988642  222346688999999999999999999987543   


Q ss_pred             ---CeeEEEEEcc
Q 036177          209 ---EVPLLVYEFI  218 (221)
Q Consensus       209 ---~~~~lv~e~~  218 (221)
                         ...+++++++
T Consensus        92 ~~~~~~~lv~~~~  104 (345)
T cd07877          92 EEFNDVYLVTHLM  104 (345)
T ss_pred             cccccEEEEehhc
Confidence               2467788775

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.81  E-value=3.3e-08  Score=75.22  Aligned_cols=76  Identities=25%  Similarity=0.316  Sum_probs=58.8

Q ss_pred             ceecccCceEEEEEEe-CCCcEEEEEeccCCC---cccHHHHHHHHHHHH-cCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH---ESNVEQFINEVVILS-QINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~---~~~~~~~~~e~~~l~-~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||++.. .++..+|+|.++...   ......+..|..++. ..+|||++++++.+...+..++++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            4689999999999985 457899999886422   222334555655544 45899999999999998999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        82 ~   82 (260)
T cd05611          82 G   82 (260)
T ss_pred             C
Confidence            5

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.80  E-value=6.2e-10  Score=91.59  Aligned_cols=85  Identities=25%  Similarity=0.425  Sum_probs=74.9

Q ss_pred             hhccCccccceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      .+.++|.+...+|+|.+|.||+++ ...+...|+|.++-.........+.|+.+++.-+|||||.++|.+.....+|+.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            466788889999999999999999 4568889999987656566677889999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+-+|
T Consensus        92 Eycggg   97 (829)
T KOG0576|consen   92 EYCGGG   97 (829)
T ss_pred             EecCCC
Confidence            999776

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.79  E-value=1.5e-08  Score=79.26  Aligned_cols=76  Identities=16%  Similarity=0.177  Sum_probs=61.4

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .+.+|.|+++.++++.. ++..+|+|.++..  .......+.+|+.+++.++||||+++++++...+..+++|||+++|
T Consensus         7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (314)
T cd08216           7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG   84 (314)
T ss_pred             hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence            44455566666666655 7889999988642  4455678999999999999999999999999999999999999865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.78  E-value=5.7e-09  Score=86.80  Aligned_cols=76  Identities=25%  Similarity=0.417  Sum_probs=67.6

Q ss_pred             ceecccCceEEEEEEeCC-CcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          146 RIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~-~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      -+||+|.||+||-|+..+ ....|||.+...+....+-+..|+.+-++|+|.|||+++|.+..++..-|.||-+|+|
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG  657 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG  657 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence            379999999999999544 4568999998877777788999999999999999999999999999989999999998

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.78  E-value=5.4e-08  Score=75.01  Aligned_cols=75  Identities=21%  Similarity=0.304  Sum_probs=56.4

Q ss_pred             eecccCceEEEEEEe-CCCcEEEEEeccCCC---cccHHHHHHHHHHHH---cCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          147 IIGQGGQGTVFKGML-TDGRIVAVKKSKSVH---ESNVEQFINEVVILS---QINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       147 ~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~---~~~~~~~~~e~~~l~---~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      .||+|+||.||++.. .++..+|+|.+....   ......+.+|..++.   ..+||||+.+.+.+...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            479999999999985 458899999875421   122233455554433   3479999999999988889999999998


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus        81 ~~   82 (279)
T cd05633          81 GG   82 (279)
T ss_pred             CC
Confidence            76

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.76  E-value=2e-08  Score=75.81  Aligned_cols=74  Identities=34%  Similarity=0.415  Sum_probs=62.5

Q ss_pred             ecccCceEEEEEEeC-CCcEEEEEeccCCC---cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          148 IGQGGQGTVFKGMLT-DGRIVAVKKSKSVH---ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       148 lg~G~fg~v~~~~~~-~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ||+|+||.||++... ++..+++|.++...   ......+.+|+.+++.++||||+++++.+...+..+++|||+++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   78 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGG   78 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCC
Confidence            689999999999854 58889999876522   224567899999999999999999999998889999999999754

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.76  E-value=4.9e-08  Score=75.21  Aligned_cols=78  Identities=33%  Similarity=0.501  Sum_probs=61.3

Q ss_pred             cccceecccCceEEEEEEeC-CCcEEEEEeccCC--CcccHHHHHHHHHHHHcC---CCCceeeeeeEEEeCCe-----e
Q 036177          143 KVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV--HESNVEQFINEVVILSQI---NHRNVVKLLGCCLETEV-----P  211 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~~~~~-----~  211 (221)
                      +..+.||+|.||.||++... ++..+|+|.++..  .......+.+|+.++.++   +|||++++++.+...+.     .
T Consensus         2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~   81 (287)
T cd07838           2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL   81 (287)
T ss_pred             eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence            45678999999999999975 4889999988642  222234577788777655   69999999999988766     8


Q ss_pred             EEEEEcccC
Q 036177          212 LLVYEFILN  220 (221)
Q Consensus       212 ~lv~e~~~~  220 (221)
                      +++|||+++
T Consensus        82 ~l~~e~~~~   90 (287)
T cd07838          82 TLVFEHVDQ   90 (287)
T ss_pred             EEEehhccc
Confidence            999999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.75  E-value=2.6e-08  Score=76.64  Aligned_cols=78  Identities=33%  Similarity=0.460  Sum_probs=65.6

Q ss_pred             cccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          143 KVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      ...+.||+|++|.||++.. .++..+++|.++..  .......+.+|+.++++++||||+++.+.+...+..++++||++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (283)
T cd05118           2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD   81 (283)
T ss_pred             ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence            3457899999999999985 46888999987652  22345678899999999999999999999988899999999986


Q ss_pred             C
Q 036177          220 N  220 (221)
Q Consensus       220 ~  220 (221)
                      +
T Consensus        82 ~   82 (283)
T cd05118          82 T   82 (283)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.75  E-value=1.5e-08  Score=77.94  Aligned_cols=78  Identities=29%  Similarity=0.417  Sum_probs=65.8

Q ss_pred             cccceecccCceEEEEEEeC-CCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          143 KVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      +..+.||+|.||.||++... ++..+++|.+...  .......+.+|+.+++.++|+|++++.+++...+..++++||++
T Consensus         2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (282)
T cd07829           2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD   81 (282)
T ss_pred             eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence            34578999999999999954 5889999988753  23345678899999999999999999999998889999999986


Q ss_pred             C
Q 036177          220 N  220 (221)
Q Consensus       220 ~  220 (221)
                      +
T Consensus        82 ~   82 (282)
T cd07829          82 M   82 (282)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.74  E-value=4.6e-09  Score=79.79  Aligned_cols=77  Identities=23%  Similarity=0.351  Sum_probs=69.6

Q ss_pred             cceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          145 SRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .+.||+|+|+.|-.+. +..+..+|||++.......+....+|++++..- .|+||+.|+..+.+....|||||-|.+|
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GG  161 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGG  161 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCc
Confidence            5689999999999887 678999999999876667778899999999988 6999999999999999999999999887

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.74  E-value=2.1e-08  Score=72.80  Aligned_cols=75  Identities=20%  Similarity=0.198  Sum_probs=52.0

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEeccCCCcc--c-------HHHH-----------------HHHHHHHHcCCCCce
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHES--N-------VEQF-----------------INEVVILSQINHRNV  198 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~--~-------~~~~-----------------~~e~~~l~~l~h~ni  198 (221)
                      ...||+|+||.||++...+|..||+|.++.....  .       ...|                 .+|...|.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            3579999999999999778999999998653211  1       1122                 349999999987776


Q ss_pred             eeeeeEEEeCCeeEEEEEcccCC
Q 036177          199 VKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       199 v~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .......  ....+|||||++++
T Consensus        82 ~~p~~~~--~~~~~iVmE~i~g~  102 (190)
T cd05147          82 PCPEPIL--LKSHVLVMEFIGDD  102 (190)
T ss_pred             CCCcEEE--ecCCEEEEEEeCCC
Confidence            4333221  22348999999763

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10345 hypothetical protein; Provisional

Probab=98.74  E-value=6.8e-08  Score=71.07  Aligned_cols=73  Identities=10%  Similarity=0.185  Sum_probs=55.7

Q ss_pred             cccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-----CCCceeeeeeEEEeCC---eeE-E
Q 036177          143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-----NHRNVVKLLGCCLETE---VPL-L  213 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~g~~~~~~---~~~-l  213 (221)
                      ...+.||+|+||.||... .+.. .+||+.........+.+.+|+..++.+     +||||++++|+..++.   ..+ +
T Consensus         5 ~~~~~LG~G~~~~Vy~hp-~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          5 SEQSPLGTGRHRKCYAHP-EDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             CCcceecCCCceEEEECC-CCcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            336789999999999622 2333 368887664444567899999999999     5799999999988763   333 7


Q ss_pred             EEEc
Q 036177          214 VYEF  217 (221)
Q Consensus       214 v~e~  217 (221)
                      |+||
T Consensus        83 I~e~   86 (210)
T PRK10345         83 IADF   86 (210)
T ss_pred             EecC
Confidence            8998

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.71  E-value=2.4e-08  Score=83.20  Aligned_cols=79  Identities=19%  Similarity=0.265  Sum_probs=59.0

Q ss_pred             cCccccceecccCceEEEEEEeCC--CcEEEEE------------------eccCCCcccHHHHHHHHHHHHcCCCCcee
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTD--GRIVAVK------------------KSKSVHESNVEQFINEVVILSQINHRNVV  199 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~--~~~vavk------------------~~~~~~~~~~~~~~~e~~~l~~l~h~niv  199 (221)
                      ++|.+.+.||+|+||.||++..+.  +...+.|                  .+. ........|.+|+.+|++++||||+
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnIv  226 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENIL  226 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCcC
Confidence            568889999999999999986422  1111111                  111 1122345688999999999999999


Q ss_pred             eeeeEEEeCCeeEEEEEccc
Q 036177          200 KLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       200 ~l~g~~~~~~~~~lv~e~~~  219 (221)
                      ++++++...+..++++|++.
T Consensus       227 ~l~~~~~~~~~~~lv~e~~~  246 (501)
T PHA03210        227 KIEEILRSEANTYMITQKYD  246 (501)
T ss_pred             cEeEEEEECCeeEEEEeccc
Confidence            99999999999999998764

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.71  E-value=9.5e-09  Score=84.06  Aligned_cols=80  Identities=24%  Similarity=0.455  Sum_probs=63.3

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEecc--C--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC--eeEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSK--S--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE--VPLLV  214 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~--~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~--~~~lv  214 (221)
                      +....+||+|+|-+||+|.. ..|..||--.++  .  .++...+.|..|+.+|+.|+||||++|+..+.+..  ..-+|
T Consensus        42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i  121 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI  121 (632)
T ss_pred             eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence            35678999999999999985 346677654332  2  34455688999999999999999999999987754  46799


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      +|+|..|
T Consensus       122 TEL~TSG  128 (632)
T KOG0584|consen  122 TELFTSG  128 (632)
T ss_pred             eecccCC
Confidence            9999876

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.71  E-value=2.8e-09  Score=77.43  Aligned_cols=78  Identities=29%  Similarity=0.598  Sum_probs=66.1

Q ss_pred             cCccccceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-CCceeeeeeEEEeC--CeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-HRNVVKLLGCCLET--EVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~--~~~~lv~  215 (221)
                      +++++.+.+|+|.++.||.|. ..+...+.||.+++-.   .+...+|+++|..|+ ||||++|+.+..++  ..+.||+
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF  114 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF  114 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence            567888999999999999998 5678889999997633   456889999999996 99999999988664  4678999


Q ss_pred             EcccC
Q 036177          216 EFILN  220 (221)
Q Consensus       216 e~~~~  220 (221)
                      ||..+
T Consensus       115 E~v~n  119 (338)
T KOG0668|consen  115 EYVNN  119 (338)
T ss_pred             hhhcc
Confidence            99865

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.71  E-value=2.1e-09  Score=79.58  Aligned_cols=84  Identities=26%  Similarity=0.317  Sum_probs=68.9

Q ss_pred             hhhccCccccceecccCceEEEEEE-eCCCcEEEEEeccCC-CcccHHHHHHHHHHHH-cCCCCceeeeeeEEEeCCeeE
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSV-HESNVEQFINEVVILS-QINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~-~l~h~niv~l~g~~~~~~~~~  212 (221)
                      ....++++....||.|+||+|++-. .+.|...|||+++.. ...+...|+.|.+... .-+.||||+|+|+....+..|
T Consensus        60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcW  139 (361)
T KOG1006|consen   60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCW  139 (361)
T ss_pred             ccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCcee
Confidence            3445666778889999999999887 567899999999863 3355677999987755 448999999999999999999


Q ss_pred             EEEEccc
Q 036177          213 LVYEFIL  219 (221)
Q Consensus       213 lv~e~~~  219 (221)
                      |-||+|.
T Consensus       140 iCMELMd  146 (361)
T KOG1006|consen  140 ICMELMD  146 (361)
T ss_pred             eeHHHHh
Confidence            9999985

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.69  E-value=1.2e-07  Score=72.97  Aligned_cols=75  Identities=20%  Similarity=0.272  Sum_probs=56.3

Q ss_pred             eecccCceEEEEEEe-CCCcEEEEEeccCCCc---ccHHHHHHHHH---HHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          147 IIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE---SNVEQFINEVV---ILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       147 ~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~---~~~~~~~~e~~---~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      .||+|+||.||++.. ..+..||+|.+.....   .....+..|..   .++...||||+.+.+.+...+..++++||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            479999999999984 4578999998754211   11223444443   3445689999999999998899999999998


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus        81 g~   82 (278)
T cd05606          81 GG   82 (278)
T ss_pred             CC
Confidence            76

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.68  E-value=3.4e-08  Score=78.45  Aligned_cols=81  Identities=26%  Similarity=0.377  Sum_probs=65.3

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe-----
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEV-----  210 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~-----  210 (221)
                      .++|.....||+|+||.||++.. .++..+++|.+...  .......+.+|+.++++++||||+++.+.....+.     
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            45677889999999999999986 45788999987642  22334668899999999999999999987765544     


Q ss_pred             -eEEEEEccc
Q 036177          211 -PLLVYEFIL  219 (221)
Q Consensus       211 -~~lv~e~~~  219 (221)
                       .++++||+.
T Consensus        94 ~~~lv~e~~~  103 (343)
T cd07851          94 DVYLVTHLMG  103 (343)
T ss_pred             cEEEEEecCC
Confidence             899999974

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.68  E-value=1.8e-08  Score=83.09  Aligned_cols=82  Identities=21%  Similarity=0.274  Sum_probs=67.6

Q ss_pred             cCccccceecccCceEEEEEE-eCCCcEEEEEeccCCCc---ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHE---SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      .-|...+.||-|+||.|-.+. ......+|.|.|+..+.   ....-...|-.+|+..+.++||+|+-.+.+.+.+|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            446678899999999999887 33456689998876443   33345778999999999999999999888899999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||.++|
T Consensus       709 dYIPGG  714 (1034)
T KOG0608|consen  709 DYIPGG  714 (1034)
T ss_pred             eccCCc
Confidence            999998

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.68  E-value=5.7e-09  Score=79.02  Aligned_cols=81  Identities=23%  Similarity=0.384  Sum_probs=63.5

Q ss_pred             cCccccceecccCceEEEEEEeCC-----CcEEEEEeccCCCc--ccHHHHHHHHHHHHcCCCCceeeeeeEEEe-CCee
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTD-----GRIVAVKKSKSVHE--SNVEQFINEVVILSQINHRNVVKLLGCCLE-TEVP  211 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~-----~~~vavk~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~~  211 (221)
                      ..|+....||+|.||.||++.-++     ....|+|.++....  .-.....||+.++++++||||++|.-+... +...
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            346667889999999999996322     23579998865311  223567899999999999999999999887 7789


Q ss_pred             EEEEEcccC
Q 036177          212 LLVYEFILN  220 (221)
Q Consensus       212 ~lv~e~~~~  220 (221)
                      +|++||.++
T Consensus       104 ~l~fdYAEh  112 (438)
T KOG0666|consen  104 WLLFDYAEH  112 (438)
T ss_pred             EEEehhhhh
Confidence            999999874

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.68  E-value=5.1e-08  Score=80.17  Aligned_cols=78  Identities=31%  Similarity=0.463  Sum_probs=65.5

Q ss_pred             CccccceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-C-----CceeeeeeEEEeCCeeEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-H-----RNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~g~~~~~~~~~l  213 (221)
                      .|.+.+.||+|.||+|.++. ...++.||||+++..... ..+-+.|+.+|..|+ |     -|+|+++.++...+.++|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f-~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF-LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHH-HHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            57889999999999999998 456899999999864332 345678999998885 3     689999999999999999


Q ss_pred             EEEccc
Q 036177          214 VYEFIL  219 (221)
Q Consensus       214 v~e~~~  219 (221)
                      |+|++.
T Consensus       266 VfELL~  271 (586)
T KOG0667|consen  266 VFELLS  271 (586)
T ss_pred             eehhhh
Confidence            999874

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.65  E-value=1.5e-07  Score=68.45  Aligned_cols=75  Identities=25%  Similarity=0.232  Sum_probs=54.3

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEeccCCCcc--c------------------------HHHHHHHHHHHHcCCCCce
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHES--N------------------------VEQFINEVVILSQINHRNV  198 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~--~------------------------~~~~~~e~~~l~~l~h~ni  198 (221)
                      ...||+|+||+||++...+|..||+|.++.....  .                        ...+.+|...+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4679999999999999768999999988653211  0                        1123578899999999987


Q ss_pred             eeeeeEEEeCCeeEEEEEcccCC
Q 036177          199 VKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       199 v~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .....+...  ..+|||||++++
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~  102 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDD  102 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCC
Confidence            544333222  348999999764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.65  E-value=1.8e-07  Score=73.99  Aligned_cols=79  Identities=23%  Similarity=0.320  Sum_probs=60.9

Q ss_pred             ccccceecccCceEEEEEEeC-C--CcEEEEEeccCC--CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeC----Cee
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT-D--GRIVAVKKSKSV--HESNVEQFINEVVILSQI-NHRNVVKLLGCCLET----EVP  211 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~-~--~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~----~~~  211 (221)
                      |.+.+.||+|+||.||++... .  +..+|+|.+...  .......+.+|+.++.++ +||||+++++.....    ...
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            566789999999999999853 3  678999987642  222345788999999999 599999999875432    356


Q ss_pred             EEEEEcccC
Q 036177          212 LLVYEFILN  220 (221)
Q Consensus       212 ~lv~e~~~~  220 (221)
                      ++++||+.+
T Consensus        82 ~~~~e~~~~   90 (332)
T cd07857          82 YLYEELMEA   90 (332)
T ss_pred             EEEEecccC
Confidence            888888753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.62  E-value=5.9e-09  Score=91.63  Aligned_cols=80  Identities=26%  Similarity=0.481  Sum_probs=68.9

Q ss_pred             ccccceecccCceEEEEEE-eCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      ++....||.|.||.||.+. ...|...|+|-++.  ........+.+|..++..++|||+|+.+|+-..++..+|.|||+
T Consensus      1237 Wqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC 1316 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYC 1316 (1509)
T ss_pred             eccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHh
Confidence            4557889999999999998 66788899997643  34444567889999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      .+|
T Consensus      1317 ~~G 1319 (1509)
T KOG4645|consen 1317 EGG 1319 (1509)
T ss_pred             ccC
Confidence            987

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.61  E-value=2.9e-07  Score=70.50  Aligned_cols=75  Identities=16%  Similarity=0.221  Sum_probs=54.3

Q ss_pred             ccccce--ecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEc
Q 036177          142 YKVSRI--IGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       142 ~~~~~~--lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      +.+.+.  +|+|+||.||++.. .++..+++|..........     |+.....+ +||||+++++.+...+..++||||
T Consensus        16 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~   90 (267)
T PHA03390         16 CEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDY   90 (267)
T ss_pred             hccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEc
Confidence            333444  59999999999984 4678899998754222211     22222222 799999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        91 ~~~~   94 (267)
T PHA03390         91 IKDG   94 (267)
T ss_pred             CCCC
Confidence            9875

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.61  E-value=4.4e-07  Score=66.07  Aligned_cols=73  Identities=36%  Similarity=0.547  Sum_probs=62.8

Q ss_pred             ecccCceEEEEEEeCC-CcEEEEEeccCCCcc-cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          148 IGQGGQGTVFKGMLTD-GRIVAVKKSKSVHES-NVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       148 lg~G~fg~v~~~~~~~-~~~vavk~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      ||+|.+|.||++.... +..+++|........ ....+.+|+..++.++|++++++++........++++||+++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~   75 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEG   75 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCC
Confidence            6899999999999643 889999998764332 456799999999999999999999999988899999999874

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.60  E-value=2e-07  Score=68.78  Aligned_cols=75  Identities=19%  Similarity=0.220  Sum_probs=59.2

Q ss_pred             ceecccCceEEEEEEeCCCcEEEEEeccCCCcc--------cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          146 RIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHES--------NVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      +.||+|++|.||+|.+ .+..+++|........        ....+.+|+.++..+.|+++.....++...+..+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            4689999999999988 6778999976542211        124588999999999999988777776677778999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      ++++
T Consensus        81 ~~G~   84 (211)
T PRK14879         81 IEGE   84 (211)
T ss_pred             eCCc
Confidence            9864

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.58  E-value=2.2e-07  Score=67.98  Aligned_cols=74  Identities=19%  Similarity=0.270  Sum_probs=55.6

Q ss_pred             eecccCceEEEEEEeCCCcEEEEEeccCCC--cc------cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          147 IIGQGGQGTVFKGMLTDGRIVAVKKSKSVH--ES------NVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       147 ~lg~G~fg~v~~~~~~~~~~vavk~~~~~~--~~------~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      .||+|+||.||++.+ ++..+++|......  ..      ....+.+|+.++..++|+++..........+..+++|||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            479999999999996 67889999754321  11      1355788999999998887655555555666778999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      +++
T Consensus        80 ~g~   82 (199)
T TIGR03724        80 EGK   82 (199)
T ss_pred             CCc
Confidence            864

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.58  E-value=3.6e-08  Score=75.28  Aligned_cols=84  Identities=19%  Similarity=0.324  Sum_probs=70.1

Q ss_pred             hccCccccceecccCceEEEEEE-eCCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      ..++|...++||+|.||.|...+ ...++.+|+|+++.   ....+..--+.|-++|..-+||.+..|--.+...+.++.
T Consensus       166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF  245 (516)
T KOG0690|consen  166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF  245 (516)
T ss_pred             ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence            34678889999999999999887 55788999999875   233344556789999999999999998877777889999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ||||+.+|
T Consensus       246 VMeyanGG  253 (516)
T KOG0690|consen  246 VMEYANGG  253 (516)
T ss_pred             EEEEccCc
Confidence            99999887

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.57  E-value=2.5e-07  Score=68.68  Aligned_cols=82  Identities=13%  Similarity=0.071  Sum_probs=63.6

Q ss_pred             hccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHH---H------HHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE---Q------FINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~---~------~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      ..++|...+++|.|+||.||.... ++..+++|.+++.......   .      |.+|+..+.++.||+|..+.......
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~  107 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA  107 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence            356788899999999999998655 5678999998763322222   2      67999999999999999887764432


Q ss_pred             --------CeeEEEEEcccC
Q 036177          209 --------EVPLLVYEFILN  220 (221)
Q Consensus       209 --------~~~~lv~e~~~~  220 (221)
                              +..+|+|||+++
T Consensus       108 ~~~~~~~~~~~~lvmEyi~G  127 (232)
T PRK10359        108 ERKTLRYAHTYIMLIEYIEG  127 (232)
T ss_pred             ccccccccCCeEEEEEEECC
Confidence                    357899999986

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.57  E-value=7e-08  Score=78.24  Aligned_cols=79  Identities=25%  Similarity=0.472  Sum_probs=70.0

Q ss_pred             cCccccceecccCceEEEEEEeCCCcEEEEEecc--CCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSK--SVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~--~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ..|++.+.||+|+-+.||+....+.+.+|+|++.  ..+.+....|.+|+..|.+| .|.+|+.|+.+-...+.+|||||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            4577889999999999999998777888888653  47778888999999999999 69999999999999999999999


Q ss_pred             cc
Q 036177          217 FI  218 (221)
Q Consensus       217 ~~  218 (221)
                      |=
T Consensus       441 ~G  442 (677)
T KOG0596|consen  441 CG  442 (677)
T ss_pred             cc
Confidence            84

>PTZ00284 protein kinase; Provisional

Probab=98.57  E-value=5.3e-07  Score=74.68  Aligned_cols=86  Identities=16%  Similarity=0.225  Sum_probs=62.5

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCC------CceeeeeeEE
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINH------RNVVKLLGCC  205 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~l~g~~  205 (221)
                      +++....++|.+.+.||+|+||.||++.. ..+..||||.++.... ...++..|+.++..++|      ++++++..++
T Consensus       122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~  200 (467)
T PTZ00284        122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF  200 (467)
T ss_pred             CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence            33445567899999999999999999985 4578899999864322 23456667777776654      4588888877


Q ss_pred             EeC-CeeEEEEEccc
Q 036177          206 LET-EVPLLVYEFIL  219 (221)
Q Consensus       206 ~~~-~~~~lv~e~~~  219 (221)
                      ... ...+++||++.
T Consensus       201 ~~~~~~~~iv~~~~g  215 (467)
T PTZ00284        201 QNETGHMCIVMPKYG  215 (467)
T ss_pred             EcCCceEEEEEeccC
Confidence            653 46789998863

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.51  E-value=4.6e-07  Score=67.66  Aligned_cols=70  Identities=27%  Similarity=0.432  Sum_probs=60.5

Q ss_pred             CceEEEEEEeC-CCcEEEEEeccCCCccc-HHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          152 GQGTVFKGMLT-DGRIVAVKKSKSVHESN-VEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       152 ~fg~v~~~~~~-~~~~vavk~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +||.||++... ++..+++|.+....... ...+.+|+..+++++|+|++++.+.+......++++||+++|
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~   72 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGG   72 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCC
Confidence            58999999964 48899999987644443 678999999999999999999999999988999999998764

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.46  E-value=1.4e-06  Score=73.44  Aligned_cols=78  Identities=19%  Similarity=0.220  Sum_probs=57.9

Q ss_pred             cccceecccCceEEEEEEeCCCcEEEEEe-cc-CCC------cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKK-SK-SVH------ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~~~~~~vavk~-~~-~~~------~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      ...+.||+|+||.||++.+... .+++|. .. ...      ....+.+.+|+.+|..++|++++....+....+..+++
T Consensus       336 ~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv  414 (535)
T PRK09605        336 IPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIV  414 (535)
T ss_pred             CccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEE
Confidence            4578899999999999987443 333332 21 111      11235688999999999999998887777777778999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus       415 ~E~~~g~  421 (535)
T PRK09605        415 MEYIGGK  421 (535)
T ss_pred             EEecCCC
Confidence            9999875

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.40  E-value=3.3e-07  Score=74.89  Aligned_cols=79  Identities=23%  Similarity=0.333  Sum_probs=61.9

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCC--------cccHHHHHHHHHHHHcCC---CCceeeeeeEEEe
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH--------ESNVEQFINEVVILSQIN---HRNVVKLLGCCLE  207 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~--------~~~~~~~~~e~~~l~~l~---h~niv~l~g~~~~  207 (221)
                      .+|...+.+|+|+||.|+.+..+ +...|.+|.+....        .......-.|+.+|+.++   |+||++++..+.+
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            44677899999999999999854 45679999764311        112223567999999996   9999999999999


Q ss_pred             CCeeEEEEEcc
Q 036177          208 TEVPLLVYEFI  218 (221)
Q Consensus       208 ~~~~~lv~e~~  218 (221)
                      .+..||+||-.
T Consensus       641 dd~yyl~te~h  651 (772)
T KOG1152|consen  641 DDYYYLETEVH  651 (772)
T ss_pred             CCeeEEEecCC
Confidence            99999999843

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.40  E-value=6.5e-08  Score=76.78  Aligned_cols=83  Identities=28%  Similarity=0.395  Sum_probs=64.6

Q ss_pred             hccCccccceecccCceEEEEEE-eCCCcEEEEEeccC---CCccc----HHHHHHHHHHHHcCCCCceeeeeeEEEe-C
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS---VHESN----VEQFINEVVILSQINHRNVVKLLGCCLE-T  208 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~---~~~~~----~~~~~~e~~~l~~l~h~niv~l~g~~~~-~  208 (221)
                      ..++|.++.+||+|+|+.||++. +...+.||+|+-+-   .....    .+-..+|-++-+.|+||.||+++.++.- .
T Consensus       461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt  540 (775)
T KOG1151|consen  461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT  540 (775)
T ss_pred             hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence            34567778999999999999998 56678899997432   11111    2346789999999999999999998754 5


Q ss_pred             CeeEEEEEcccC
Q 036177          209 EVPLLVYEFILN  220 (221)
Q Consensus       209 ~~~~lv~e~~~~  220 (221)
                      +..+-|+||+++
T Consensus       541 dsFCTVLEYceG  552 (775)
T KOG1151|consen  541 DSFCTVLEYCEG  552 (775)
T ss_pred             ccceeeeeecCC
Confidence            677899999986

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.33  E-value=5.2e-08  Score=72.70  Aligned_cols=80  Identities=18%  Similarity=0.361  Sum_probs=65.7

Q ss_pred             CccccceecccCceEEEEEEeCCCcEEEEEecc--CCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSK--SVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      ++.+..+|.+...|..|+|+| .|..+.+|++.  ..+....++|..|...|+-+.||||+..+|.|.++..+-++..||
T Consensus       191 ~lnl~tkl~e~hsgelwrgrw-qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m  269 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRW-QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM  269 (448)
T ss_pred             hhhhhhhhccCCCcccccccc-cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence            344566788888999999999 55666667664  344555678999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      |.|
T Consensus       270 p~g  272 (448)
T KOG0195|consen  270 PFG  272 (448)
T ss_pred             cch
Confidence            976

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.29  E-value=3e-06  Score=62.01  Aligned_cols=76  Identities=22%  Similarity=0.213  Sum_probs=54.7

Q ss_pred             ccccceecccCceEEEEEEeCCCcEEEEEeccCCCcc----------------------cHHHHHHHHHHHHcCCCCc--
Q 036177          142 YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHES----------------------NVEQFINEVVILSQINHRN--  197 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~n--  197 (221)
                      +...+.||+|+||.||++...+|..+|||..+.....                      ....+.+|...+..+.|++  
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   96 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP   96 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            5557889999999999999878999999976532110                      1123677888888887774  


Q ss_pred             eeeeeeEEEeCCeeEEEEEcccCC
Q 036177          198 VVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       198 iv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +...++    ....+++|||++++
T Consensus        97 v~~~~~----~~~~~lv~e~~~g~  116 (198)
T cd05144          97 VPKPID----WNRHAVVMEYIDGV  116 (198)
T ss_pred             CCceee----cCCceEEEEEeCCc
Confidence            444433    34568999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.29  E-value=2.6e-06  Score=64.02  Aligned_cols=66  Identities=17%  Similarity=0.143  Sum_probs=53.5

Q ss_pred             cCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          151 GGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       151 G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      |.||.||.+.. .++..+|+|.++...     .+.+|...+....||||+++++.....+..+++|||+++|
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   70 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGG   70 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCC
Confidence            78999999984 568899999886532     2345555566668999999999998889999999999876

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=98.24  E-value=9.1e-07  Score=47.40  Aligned_cols=34  Identities=50%  Similarity=1.058  Sum_probs=28.0

Q ss_pred             ccccccCCCCCCC--CCceeecCCceeeeCCCCccCC
Q 036177           20 DIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGD   54 (221)
Q Consensus        20 ~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~   54 (221)
                      |++||.... ..|  .+.|.|+.|+|.|.|+.||..+
T Consensus         1 DidEC~~~~-~~C~~~~~C~N~~Gsy~C~C~~Gy~~~   36 (42)
T PF07645_consen    1 DIDECAEGP-HNCPENGTCVNTEGSYSCSCPPGYELN   36 (42)
T ss_dssp             ESSTTTTTS-SSSSTTSEEEEETTEEEEEESTTEEEC
T ss_pred             CccccCCCC-CcCCCCCEEEcCCCCEEeeCCCCcEEC
Confidence            789998633 355  6999999999999999999843

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.24  E-value=4.4e-06  Score=57.76  Aligned_cols=74  Identities=19%  Similarity=0.127  Sum_probs=60.1

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCC--CceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINH--RNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .+.+|+|.++.||++... +..+++|.......  ...+.+|...+..++|  +++.++++.....+..++++||++++
T Consensus         3 ~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTK-DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             ceecccccccceEEEEec-CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            467899999999999974 47899998765333  4678999999999966  58888888877777899999998753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.23  E-value=1e-06  Score=74.69  Aligned_cols=74  Identities=27%  Similarity=0.466  Sum_probs=60.9

Q ss_pred             ccccceecccCceE-EEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          142 YKVSRIIGQGGQGT-VFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       142 ~~~~~~lg~G~fg~-v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      +...+.+|.|+-|+ ||+|.+ .++.||||++-...   ..-..+|+..|..- .|||||++++.-..+...||..|++.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            45577899998887 799999 88999999875422   23356999999887 79999999999988999999999864

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.16  E-value=1.1e-07  Score=71.02  Aligned_cols=77  Identities=26%  Similarity=0.363  Sum_probs=59.1

Q ss_pred             cccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC-----eeEEE
Q 036177          143 KVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE-----VPLLV  214 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-----~~~lv  214 (221)
                      +..+-||.|+||.||..+. ++|+.||.|++..  .+-...+.+.+|+++|.-++|.|+++++.+.....     ++|++
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~  135 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL  135 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence            3466899999999998885 4688999998754  22233467999999999999999999988765432     56677


Q ss_pred             EEccc
Q 036177          215 YEFIL  219 (221)
Q Consensus       215 ~e~~~  219 (221)
                      +|+|.
T Consensus       136 TELmQ  140 (449)
T KOG0664|consen  136 TELMQ  140 (449)
T ss_pred             HHHHH
Confidence            77663

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.14  E-value=3e-06  Score=61.00  Aligned_cols=88  Identities=19%  Similarity=0.337  Sum_probs=70.8

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEE-eCCCcEEEEEeccC-CCcccHHHHHHHHHHHH-cCCCCceeeeeeEEEeC
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS-VHESNVEQFINEVVILS-QINHRNVVKLLGCCLET  208 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~-~l~h~niv~l~g~~~~~  208 (221)
                      ...++.+.+.+.-...||+|++|.|-+-+ ..+|...|+|.++. ...+.....++|+.+.. ....|.+|+|+|.....
T Consensus        38 ~~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re  117 (282)
T KOG0984|consen   38 DRNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE  117 (282)
T ss_pred             cCccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc
Confidence            34467777788888899999999986665 35789999999875 44555677889998755 45899999999998888


Q ss_pred             CeeEEEEEccc
Q 036177          209 EVPLLVYEFIL  219 (221)
Q Consensus       209 ~~~~lv~e~~~  219 (221)
                      ...+|-||.|.
T Consensus       118 gdvwIcME~M~  128 (282)
T KOG0984|consen  118 GDVWICMELMD  128 (282)
T ss_pred             ccEEEeHHHhh
Confidence            88999999885

>smart00090 RIO RIO-like kinase

Probab=98.11  E-value=1.1e-05  Score=60.73  Aligned_cols=76  Identities=21%  Similarity=0.170  Sum_probs=53.9

Q ss_pred             CccccceecccCceEEEEEE--eCCCcEEEEEeccCCCcc------------------------cHHHHHHHHHHHHcCC
Q 036177          141 NYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHES------------------------NVEQFINEVVILSQIN  194 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~--~~~~~~vavk~~~~~~~~------------------------~~~~~~~e~~~l~~l~  194 (221)
                      .+.+.+.||+|+||.||++.  ..+|..||+|.++.....                        ....+.+|...+.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35678899999999999998  567999999987642210                        0123568999999996


Q ss_pred             CCc--eeeeeeEEEeCCeeEEEEEcccC
Q 036177          195 HRN--VVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       195 h~n--iv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.+  +.+++..    ...++||||+++
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g  132 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGG  132 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecC
Confidence            533  3344432    235899999876

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.11  E-value=2.6e-06  Score=65.65  Aligned_cols=86  Identities=22%  Similarity=0.359  Sum_probs=68.9

Q ss_pred             hhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCe
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEV  210 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~  210 (221)
                      .....+|.+..+||+|+|..|....+ +..+.+|+|+++.   .+..+..-.+.|-.++... +||.+|.|..++.....
T Consensus       246 ~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr  325 (593)
T KOG0695|consen  246 GLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR  325 (593)
T ss_pred             ccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce
Confidence            34456788999999999999999885 4567889998764   3444455566777777666 89999999988888889


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      +++|.||+++|
T Consensus       326 lffvieyv~gg  336 (593)
T KOG0695|consen  326 LFFVIEYVNGG  336 (593)
T ss_pred             EEEEEEEecCc
Confidence            99999999987

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.09  E-value=1.7e-06  Score=64.86  Aligned_cols=81  Identities=25%  Similarity=0.386  Sum_probs=64.0

Q ss_pred             CccccceecccCceEEEEEE-eCCCcEEEEEeccCCC-----cc---cHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCe
Q 036177          141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVH-----ES---NVEQFINEVVILSQI-NHRNVVKLLGCCLETEV  210 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~-----~~---~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~  210 (221)
                      .+...+.||.|..+.|.+.. -..|...|+|++....     +.   -.++-++|+.+|+++ -||+|+.+...+.++..
T Consensus        18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF   97 (411)
T KOG0599|consen   18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF   97 (411)
T ss_pred             hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence            34556789999888888776 4567888888764311     11   134567899999998 79999999999999999


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++|+|+|++|
T Consensus        98 ~FlVFdl~prG  108 (411)
T KOG0599|consen   98 VFLVFDLMPRG  108 (411)
T ss_pred             hhhhhhhcccc
Confidence            99999999987

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.05  E-value=1.2e-05  Score=64.67  Aligned_cols=78  Identities=29%  Similarity=0.416  Sum_probs=61.7

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-----C---CceeeeeeEEEe---
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-----H---RNVVKLLGCCLE---  207 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~g~~~~---  207 (221)
                      .+|...++||-|.|++||.+.. ...+.||+|+.+.+... .+.-+.|+++|+.++     |   ..||+|+..+.-   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhY-tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHY-TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHH-HHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            5678899999999999999984 45778999998864332 456789999999773     2   468999998764   


Q ss_pred             -CCeeEEEEEcc
Q 036177          208 -TEVPLLVYEFI  218 (221)
Q Consensus       208 -~~~~~lv~e~~  218 (221)
                       +....||+|++
T Consensus       157 NG~HVCMVfEvL  168 (590)
T KOG1290|consen  157 NGQHVCMVFEVL  168 (590)
T ss_pred             CCcEEEEEehhh
Confidence             34788999986

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.05  E-value=4.7e-08  Score=72.15  Aligned_cols=79  Identities=34%  Similarity=0.481  Sum_probs=59.3

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEec-cC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--------Ce
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKS-KS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET--------EV  210 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~-~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--------~~  210 (221)
                      +....++|+|.||.||+++- ..++.||+|+. .. ....-...-++|+++|..++|+|++.++-+|...        ..
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t   98 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT   98 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence            44467899999999999984 45777888864 22 2333344578999999999999999999887542        34


Q ss_pred             eEEEEEcccC
Q 036177          211 PLLVYEFILN  220 (221)
Q Consensus       211 ~~lv~e~~~~  220 (221)
                      .+||++++++
T Consensus        99 ~ylVf~~ceh  108 (376)
T KOG0669|consen   99 FYLVFDFCEH  108 (376)
T ss_pred             eeeeHHHhhh
Confidence            7899988763

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.04  E-value=2.9e-06  Score=66.76  Aligned_cols=80  Identities=26%  Similarity=0.468  Sum_probs=66.8

Q ss_pred             ccCccccceecccCceEEEEEEe-C---CCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-T---DGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~---~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  213 (221)
                      .+.+...+.||+|.|+.||++.+ .   ....||+|.+...+.-  ....+|+++|..+ -+.||+++.++....+...+
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~i  112 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAI  112 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCCeeEE
Confidence            35567789999999999999984 3   4668999988653322  3488999999999 69999999999999999999


Q ss_pred             EEEcccC
Q 036177          214 VYEFILN  220 (221)
Q Consensus       214 v~e~~~~  220 (221)
                      |+||+++
T Consensus       113 vlp~~~H  119 (418)
T KOG1167|consen  113 VLPYFEH  119 (418)
T ss_pred             EecccCc
Confidence            9999875

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.04  E-value=1.2e-06  Score=69.13  Aligned_cols=85  Identities=20%  Similarity=0.335  Sum_probs=64.6

Q ss_pred             hhccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCee
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~  211 (221)
                      +...+|....+||+|+||.|..+.- .....+|||+++.   ....+.+--+.|-++|+-. +-|.++.|...+..-+.+
T Consensus       346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL  425 (683)
T KOG0696|consen  346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL  425 (683)
T ss_pred             eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence            3445688899999999999999974 3356789998865   2223334456677777766 678888888888888899


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      |.||||+.+|
T Consensus       426 yFVMEyvnGG  435 (683)
T KOG0696|consen  426 YFVMEYVNGG  435 (683)
T ss_pred             eeEEEEecCc
Confidence            9999999887

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=98.04  E-value=3.9e-06  Score=66.98  Aligned_cols=83  Identities=24%  Similarity=0.385  Sum_probs=67.7

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .+.|..-++||+|+||.|+-+.. ..|..+|.|.+..   ........-++|-.+|.+++.+.||+|--++.+.+.+.+|
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV  263 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV  263 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence            35577788999999999999884 4688888887643   1222234578999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      +..|.+|
T Consensus       264 LtlMNGG  270 (591)
T KOG0986|consen  264 LTLMNGG  270 (591)
T ss_pred             EEeecCC
Confidence            9999987

>PHA02882 putative serine/threonine kinase; Provisional

Probab=98.04  E-value=3.3e-05  Score=60.01  Aligned_cols=80  Identities=21%  Similarity=0.327  Sum_probs=51.0

Q ss_pred             ccCccccceecccCceEEEEEEeCC----CcEEEEEeccCCCcccH-----------HHHHHHHHHHHcCCCCceeeeee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTD----GRIVAVKKSKSVHESNV-----------EQFINEVVILSQINHRNVVKLLG  203 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~----~~~vavk~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~l~g  203 (221)
                      .+.|.+.+.||+|+||.||++...+    +..+++|..........           .....+...+..++|+|++++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            3568889999999999999998643    34566665332211110           11223334456779999999998


Q ss_pred             EEEeCC----eeEEEEEcc
Q 036177          204 CCLETE----VPLLVYEFI  218 (221)
Q Consensus       204 ~~~~~~----~~~lv~e~~  218 (221)
                      ......    ..++++|+.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~  109 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKL  109 (294)
T ss_pred             eeeEecCCceEEEEEEehh
Confidence            765433    345677654

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.03  E-value=1.5e-05  Score=57.65  Aligned_cols=73  Identities=27%  Similarity=0.335  Sum_probs=46.9

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEeccCCCcc--cHHHH----------------------HHHHHHHHcCCCCc--e
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHES--NVEQF----------------------INEVVILSQINHRN--V  198 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~--~~~~~----------------------~~e~~~l~~l~h~n--i  198 (221)
                      .+.||+|+||.||++...++..||+|..+.....  ....+                      ..|...+..+.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999777999999987652211  11111                      24555555553332  3


Q ss_pred             eeeeeEEEeCCeeEEEEEcccCC
Q 036177          199 VKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       199 v~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .+.++.    ...+++|||+++|
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~  100 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGD  100 (187)
T ss_pred             CceEec----CCCEEEEEEeCCC
Confidence            333332    3468999999873

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms]

Probab=97.98  E-value=8.5e-06  Score=75.53  Aligned_cols=51  Identities=29%  Similarity=0.599  Sum_probs=34.6

Q ss_pred             cCCcccccCCCCCcccccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc
Q 036177            6 QCSLIFLLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus         6 ~c~~~~~~~~~~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      .|+.||+.+.=.-.++++|.. +.|.-.|.|.|..|+|.|.|..|+.|..+.
T Consensus      3927 nC~~gyTG~~Ce~~Gi~eCs~-n~C~~gg~C~n~~gsf~CncT~g~~gr~c~ 3977 (4289)
T KOG1219|consen 3927 NCPNGYTGKRCEARGISECSK-NVCGTGGQCINIPGSFHCNCTPGILGRTCC 3977 (4289)
T ss_pred             eCCCCccCceeeccccccccc-ccccCCceeeccCCceEeccChhHhcccCc
Confidence            356666553322224788864 433337899999999999999999877643

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.96  E-value=2e-05  Score=64.62  Aligned_cols=31  Identities=26%  Similarity=0.339  Sum_probs=27.6

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEeccCC
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSKSV  175 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~  175 (221)
                      .+.||.|++|+||+|.+.+|+.||||+.++.
T Consensus       122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~  152 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPG  152 (437)
T ss_pred             CcceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence            3579999999999999989999999998763

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.92  E-value=1.8e-05  Score=66.96  Aligned_cols=80  Identities=19%  Similarity=0.316  Sum_probs=50.1

Q ss_pred             hccCccccceecccCceEEEEEEeC-C----CcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeE------EE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLT-D----GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGC------CL  206 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~-~----~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~------~~  206 (221)
                      ..++|.+.+.||+|+||.||++... +    +..+|+|.+.....  .+.+..|.  +....+.++..++..      ..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e~--l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNER--VRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHHH--HHhhchhhHHHHHHhhhcccccc
Confidence            4577888999999999999999964 4    67899998764222  22222221  222222222222211      23


Q ss_pred             eCCeeEEEEEcccCC
Q 036177          207 ETEVPLLVYEFILNG  221 (221)
Q Consensus       207 ~~~~~~lv~e~~~~G  221 (221)
                      .....+|++||+++|
T Consensus       206 ~~~~~~LV~ey~~~g  220 (566)
T PLN03225        206 KEDEYWLVWRYEGES  220 (566)
T ss_pred             cCCceEEEEEecCCC
Confidence            456789999999865

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=97.88  E-value=1.3e-05  Score=52.27  Aligned_cols=38  Identities=26%  Similarity=0.503  Sum_probs=29.3

Q ss_pred             ccccccCCCCCCC-CCceeec--CCceeeeCCCCccCCCcc
Q 036177           20 DIDECLDKEKYHC-EGKCKNT--IGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus        20 ~~~~C~~~~~~~c-~~~C~~~--~~~~~C~C~~g~~~~~~~   57 (221)
                      ++..|...-+.-| +|.|...  ...+.|.|+.||.|..+.
T Consensus        41 ~i~~Cp~ey~~YClHG~C~yI~dl~~~~CrC~~GYtGeRCE   81 (139)
T PHA03099         41 AIRLCGPEGDGYCLHGDCIHARDIDGMYCRCSHGYTGIRCQ   81 (139)
T ss_pred             ccccCChhhCCEeECCEEEeeccCCCceeECCCCccccccc
Confidence            4667876555577 8899874  467889999999998854

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=97.84  E-value=1.1e-05  Score=60.70  Aligned_cols=80  Identities=16%  Similarity=0.326  Sum_probs=64.4

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++++....||+|.-|+|++..+ +.|...|||.++. ....+.+..++.+.++..- +.|.||+.+|++......++-||
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe  171 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME  171 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence            3455567899999999999995 4578899999876 4555567788888877665 58999999999999888888888


Q ss_pred             ccc
Q 036177          217 FIL  219 (221)
Q Consensus       217 ~~~  219 (221)
                      .|.
T Consensus       172 lMs  174 (391)
T KOG0983|consen  172 LMS  174 (391)
T ss_pred             HHH
Confidence            763

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.81  E-value=4.3e-05  Score=56.52  Aligned_cols=78  Identities=24%  Similarity=0.414  Sum_probs=58.8

Q ss_pred             ccCccccceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCC-CceeeeeeEEEeCCeeEEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINH-RNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ...|.+.+.||+|+||.+|.|. ..+|..||+|.-.....  ...+..|.++..-|+| ..|..+.-+......-.||||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            3568889999999999999998 67899999997543222  2347789999988864 555555555566667778888


Q ss_pred             cc
Q 036177          217 FI  218 (221)
Q Consensus       217 ~~  218 (221)
                      ++
T Consensus        92 LL   93 (341)
T KOG1163|consen   92 LL   93 (341)
T ss_pred             cc
Confidence            75

>KOG4260 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.74  E-value=1.6e-05  Score=58.88  Aligned_cols=51  Identities=27%  Similarity=0.518  Sum_probs=43.4

Q ss_pred             CCccCCcccccCCCCCcccccccCCCCCCC--CCceeecCCceeeeCCCCccCC
Q 036177            3 SKSQCSLIFLLKKLRATDIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGD   54 (221)
Q Consensus         3 ~~~~c~~~~~~~~~~c~~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~   54 (221)
                      +|-+|.-||.+|+..|.|+++|... +..|  +.+|.|+.|+|+|.+.+||.+.
T Consensus       218 ~C~kCkkGW~lde~gCvDvnEC~~e-p~~c~~~qfCvNteGSf~C~dk~Gy~~g  270 (350)
T KOG4260|consen  218 GCSKCKKGWKLDEEGCVDVNECQNE-PAPCKAHQFCVNTEGSFKCEDKEGYKKG  270 (350)
T ss_pred             ChhhhcccceecccccccHHHHhcC-CCCCChhheeecCCCceEecccccccCC
Confidence            4678899999999999999999852 3345  8899999999999999898774

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.73  E-value=0.0002  Score=52.49  Aligned_cols=71  Identities=11%  Similarity=0.010  Sum_probs=52.0

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEeccCCCc----ccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHE----SNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      ...|++|.||+||...- .+..++.+.+.....    .....|.+|+++|.++ +|++++++++.    +..+++|||++
T Consensus         7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~   81 (218)
T PRK12274          7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA   81 (218)
T ss_pred             ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence            56899999999996654 566677666644222    1123588999999999 45888888875    34689999987


Q ss_pred             C
Q 036177          220 N  220 (221)
Q Consensus       220 ~  220 (221)
                      +
T Consensus        82 G   82 (218)
T PRK12274         82 G   82 (218)
T ss_pred             C
Confidence            5

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.68  E-value=0.00043  Score=53.72  Aligned_cols=78  Identities=33%  Similarity=0.556  Sum_probs=63.2

Q ss_pred             ccccceecccCceEEEEEEeCCCcEEEEEeccCCCc-c--cHHHHHHHHHHHHcCCCC-ceeeeeeEEEeCCeeEEEEEc
Q 036177          142 YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHE-S--NVEQFINEVVILSQINHR-NVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~-~--~~~~~~~e~~~l~~l~h~-niv~l~g~~~~~~~~~lv~e~  217 (221)
                      |.....||.|.|+.||.+...  ..+++|.+..... .  ....|.+|+.+++.+.|+ +++++..........+++++|
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            345678999999999999975  7789998765222 2  467899999999999888 799999998666667999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +.++
T Consensus        80 ~~~~   83 (384)
T COG0515          80 VDGG   83 (384)
T ss_pred             CCCC
Confidence            8764

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.65  E-value=2.2e-05  Score=58.97  Aligned_cols=81  Identities=16%  Similarity=0.343  Sum_probs=61.1

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEE-eCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCL-ETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~-~~~~~~lv~e  216 (221)
                      +.|.+.+.||+|.||.+..+.- .....+++|.+.. ......+|.+|..---.| .|.||+.-+.+.. ..+....++|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~-p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR-PQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc-chhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            4577789999999999999984 4456788887754 334467899997654455 6999998776544 4556668999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+|.|
T Consensus       103 ~aP~g  107 (378)
T KOG1345|consen  103 FAPRG  107 (378)
T ss_pred             cCccc
Confidence            99987

>KOG1214 consensus Nidogen and related basement membrane protein proteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=97.61  E-value=4.8e-05  Score=64.73  Aligned_cols=53  Identities=40%  Similarity=0.715  Sum_probs=44.9

Q ss_pred             CCcc--CCcccccCCCCCcccccccCCCCCCCCCceeecCCceeeeCCCCccCCCc
Q 036177            3 SKSQ--CSLIFLLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus         3 ~~~~--c~~~~~~~~~~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      +.++  |-+||-.|...|.|.++|+. ..++.+..|-|+++++.|.|.+||.||+-
T Consensus       807 s~y~C~CLPGfsGDG~~c~dvDeC~p-srChp~A~CyntpgsfsC~C~pGy~GDGf  861 (1289)
T KOG1214|consen  807 STYSCACLPGFSGDGHQCTDVDECSP-SRCHPAATCYNTPGSFSCRCQPGYYGDGF  861 (1289)
T ss_pred             ceEEEeecCCccCCccccccccccCc-cccCCCceEecCCCcceeecccCccCCCc
Confidence            4444  57899999999999999983 55566899999999999999999999874

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.60  E-value=0.00019  Score=60.07  Aligned_cols=34  Identities=26%  Similarity=0.435  Sum_probs=28.8

Q ss_pred             cCccccceecccCceEEEEEEeCC-CcEEEEEeccC
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKS  174 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~-~~~vavk~~~~  174 (221)
                      ..|.. +.||+|++|+||++.+.+ |+.||||++++
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP  154 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRP  154 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCc
Confidence            34554 679999999999999877 99999999875

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.51  E-value=0.00028  Score=55.66  Aligned_cols=78  Identities=23%  Similarity=0.328  Sum_probs=57.5

Q ss_pred             CccccceecccCceEEEEEEeCCC--cEEEEEeccCCCcccHHHHHHHHHHHHcCCC----CceeeeeeEE-EeCCeeEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLTDG--RIVAVKKSKSVHESNVEQFINEVVILSQINH----RNVVKLLGCC-LETEVPLL  213 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~~~--~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~g~~-~~~~~~~l  213 (221)
                      ++.+.+.||+|+||.||.+.....  ..+|+|.-..........+..|..+|..+..    +++..++... ......+|
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            678899999999999999985343  4688887654322222267889999888862    5777877777 35667899


Q ss_pred             EEEcc
Q 036177          214 VYEFI  218 (221)
Q Consensus       214 v~e~~  218 (221)
                      ||+..
T Consensus        99 VM~l~  103 (322)
T KOG1164|consen   99 VMSLL  103 (322)
T ss_pred             EEecc
Confidence            99865

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=97.49  E-value=6.7e-05  Score=38.37  Aligned_cols=29  Identities=38%  Similarity=0.667  Sum_probs=23.3

Q ss_pred             CCCCCCceeecCCceeeeCCCCccCCCcc
Q 036177           29 KYHCEGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus        29 ~~~c~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      +..|+-+|.+.++++.|.|+.||..+.+.
T Consensus         5 NGgC~h~C~~~~g~~~C~C~~Gy~L~~D~   33 (36)
T PF14670_consen    5 NGGCSHICVNTPGSYRCSCPPGYKLAEDG   33 (36)
T ss_dssp             GGGSSSEEEEETTSEEEE-STTEEE-TTS
T ss_pred             CCCcCCCCccCCCceEeECCCCCEECcCC
Confidence            44788899999999999999999887654

...

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=97.45  E-value=4.8e-05  Score=57.91  Aligned_cols=72  Identities=19%  Similarity=0.242  Sum_probs=55.1

Q ss_pred             cceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHc-CCCCceeeeeeEEEe----CCeeEEEEEcc
Q 036177          145 SRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQ-INHRNVVKLLGCCLE----TEVPLLVYEFI  218 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~g~~~~----~~~~~lv~e~~  218 (221)
                      .++||-|-.|.|..+. ...+...|+|.+...     ...++|+++--. -.|||||+.+.++..    ..-+++|||.|
T Consensus        67 ~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~m  141 (400)
T KOG0604|consen   67 WQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECM  141 (400)
T ss_pred             hhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecc
Confidence            3679999999999887 446788999998652     234577776333 379999999998754    24578999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus       142 eGG  144 (400)
T KOG0604|consen  142 EGG  144 (400)
T ss_pred             cch
Confidence            987

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.41  E-value=9.1e-05  Score=61.48  Aligned_cols=79  Identities=23%  Similarity=0.248  Sum_probs=62.6

Q ss_pred             ccCccccceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++.+.+...+|.|+|+.+-.+. ...++..++|++.....    +-.+|+.++... +||||+++.+++......|+|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            4567777889999999998887 45677889998865311    233666565555 89999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      ++.+|
T Consensus       397 ~l~g~  401 (612)
T KOG0603|consen  397 LLDGG  401 (612)
T ss_pred             hcccc
Confidence            99875

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=97.38  E-value=0.00016  Score=56.63  Aligned_cols=89  Identities=22%  Similarity=0.303  Sum_probs=64.2

Q ss_pred             eeechhhhhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-C-C----ceee
Q 036177          128 KLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-H-R----NVVK  200 (221)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-h-~----niv~  200 (221)
                      ..+...++.  ...|.+...+|+|.||.|.+... ..+..||+|+++.-... .++-+-|+.+|.++. + |    .+|.
T Consensus        79 ~v~~~gD~l--~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~  155 (415)
T KOG0671|consen   79 YVYQVGDIL--TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQ  155 (415)
T ss_pred             EEEEecccc--ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEe
Confidence            444445544  45688899999999999999984 34688999999764433 356778999999983 2 2    2455


Q ss_pred             eeeEEEeCCeeEEEEEccc
Q 036177          201 LLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       201 l~g~~~~~~~~~lv~e~~~  219 (221)
                      +...+.-.+...||+|.|-
T Consensus       156 m~~wFdyrghiCivfellG  174 (415)
T KOG0671|consen  156 MRDWFDYRGHICIVFELLG  174 (415)
T ss_pred             eehhhhccCceEEEEeccC
Confidence            5556666788899999773

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.28  E-value=0.0004  Score=53.85  Aligned_cols=77  Identities=23%  Similarity=0.364  Sum_probs=54.7

Q ss_pred             cCccccceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      -+|...++||+|+||.++.|. +-++..||||.=...  ++...+..|-+..+-| ..++|...+-.-..+..-.||+|+
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL  105 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL  105 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence            457889999999999999998 558999999964322  2234466777777766 567777766444445555677776


Q ss_pred             c
Q 036177          218 I  218 (221)
Q Consensus       218 ~  218 (221)
                      +
T Consensus       106 L  106 (449)
T KOG1165|consen  106 L  106 (449)
T ss_pred             h
Confidence            4

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.24  E-value=0.0011  Score=49.02  Aligned_cols=75  Identities=17%  Similarity=0.258  Sum_probs=55.0

Q ss_pred             ceecccCceEEEEEEeCCCcEEEEEeccCCCc-ccHHHHHHHHHHHHcCCC--CceeeeeeEEEeC---CeeEEEEEccc
Q 036177          146 RIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHE-SNVEQFINEVVILSQINH--RNVVKLLGCCLET---EVPLLVYEFIL  219 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~-~~~~~~~~e~~~l~~l~h--~niv~l~g~~~~~---~~~~lv~e~~~  219 (221)
                      +.++.|..+.+|+....+|..+++|....... .....+.+|..++..+.+  .++.+++......   +..+++|||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            46789999999999876668899998754322 234578999999999865  3456666665443   25689999997


Q ss_pred             C
Q 036177          220 N  220 (221)
Q Consensus       220 ~  220 (221)
                      +
T Consensus        84 G   84 (223)
T cd05154          84 G   84 (223)
T ss_pred             C
Confidence            5

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=97.23  E-value=0.00039  Score=44.25  Aligned_cols=13  Identities=8%  Similarity=-0.077  Sum_probs=9.9

Q ss_pred             CCCccCCcccccC
Q 036177            2 QSKSQCSLIFLLK   14 (221)
Q Consensus         2 ~~~~~c~~~~~~~   14 (221)
                      ..|.+|..+|..+
T Consensus         4 ~~Ct~C~~g~~~~   16 (96)
T PTZ00382          4 AVCTSCDSDKKPN   16 (96)
T ss_pred             cccCcCCCCCccC
Confidence            3578999998664

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.16  E-value=0.00076  Score=35.08  Aligned_cols=31  Identities=55%  Similarity=1.207  Sum_probs=24.1

Q ss_pred             ccccccCCCCCCC--CCceeecCCceeeeCCCCcc
Q 036177           20 DIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMY   52 (221)
Q Consensus        20 ~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~   52 (221)
                      |+++|...  ..|  .+.|.+..++|.|.|+.||.
T Consensus         1 d~~~C~~~--~~C~~~~~C~~~~g~~~C~C~~g~~   33 (39)
T smart00179        1 DIDECASG--NPCQNGGTCVNTVGSYRCECPPGYT   33 (39)
T ss_pred             CcccCcCC--CCcCCCCEeECCCCCeEeECCCCCc
Confidence            45677642  245  55999999999999999997

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.10  E-value=0.00039  Score=61.52  Aligned_cols=84  Identities=20%  Similarity=0.410  Sum_probs=57.3

Q ss_pred             hhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC---CCceeeeeeEEEeCCee
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN---HRNVVKLLGCCLETEVP  211 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~g~~~~~~~~  211 (221)
                      .+...+.|.+.+.+|+|+||.||+|.-.++..||+|.-++...-   +|.--..+|.+|+   -+.|..+..+....+.-
T Consensus       693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S  769 (974)
T KOG1166|consen  693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNAS  769 (974)
T ss_pred             eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence            34444667889999999999999999767999999988764443   2444444555555   12233333344445666


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      +||+||.+.|
T Consensus       770 ~lv~ey~~~G  779 (974)
T KOG1166|consen  770 VLVSEYSPYG  779 (974)
T ss_pred             eeeeeccccc
Confidence            8999998876

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.08  E-value=0.0003  Score=36.02  Aligned_cols=26  Identities=54%  Similarity=0.961  Sum_probs=20.7

Q ss_pred             CCCCceeecCCceeeeCCCCccCCCc
Q 036177           31 HCEGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        31 ~c~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      +-+..|.++.+++.|.|+.||.|++.
T Consensus         9 ~~nA~C~~~~~~~~C~C~~Gy~GdG~   34 (36)
T PF12947_consen    9 HPNATCTNTGGSYTCTCKPGYEGDGF   34 (36)
T ss_dssp             -TTCEEEE-TTSEEEEE-CEEECCST
T ss_pred             CCCcEeecCCCCEEeECCCCCccCCc
Confidence            33789999999999999999999874

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.05  E-value=0.002  Score=45.53  Aligned_cols=72  Identities=17%  Similarity=0.110  Sum_probs=50.3

Q ss_pred             ceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCcee-eeeeEEEeCCeeEEEEEcccCC
Q 036177          146 RIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV-KLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +.++.|.++.||+... .+..+++|....... ....+.+|+..+..+.+.+++ +++..  .....++||||+++.
T Consensus         4 ~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~   76 (170)
T cd05151           4 SPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGS   76 (170)
T ss_pred             eecCCcccCceEEEEE-CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCC
Confidence            4678899999999987 477899998755332 223567899999988655544 44433  233458999999863

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.03  E-value=0.0033  Score=47.46  Aligned_cols=75  Identities=15%  Similarity=0.183  Sum_probs=52.1

Q ss_pred             cceec-ccCceEEEEEEeCCCcEEEEEeccCC-------------CcccHHHHHHHHHHHHcCCCCce--eeeeeEEEeC
Q 036177          145 SRIIG-QGGQGTVFKGMLTDGRIVAVKKSKSV-------------HESNVEQFINEVVILSQINHRNV--VKLLGCCLET  208 (221)
Q Consensus       145 ~~~lg-~G~fg~v~~~~~~~~~~vavk~~~~~-------------~~~~~~~~~~e~~~l~~l~h~ni--v~l~g~~~~~  208 (221)
                      ...|| .|+.|+||.... .+..+++|.....             +......+.+|+.++..++|+++  +..++.....
T Consensus        36 ~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             CceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            45677 888889998887 4677888865321             11233568899999999988775  6677664432


Q ss_pred             -C---eeEEEEEcccC
Q 036177          209 -E---VPLLVYEFILN  220 (221)
Q Consensus       209 -~---~~~lv~e~~~~  220 (221)
                       .   ..++|+||+++
T Consensus       115 ~~~~~~~~lV~e~l~G  130 (239)
T PRK01723        115 HGLFYRADILIERIEG  130 (239)
T ss_pred             cCcceeeeEEEEecCC
Confidence             2   23599999986

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=96.90  E-value=0.00054  Score=56.14  Aligned_cols=78  Identities=23%  Similarity=0.303  Sum_probs=60.9

Q ss_pred             cCccccceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC------CCceeeeeeEEEeCCeeE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN------HRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~g~~~~~~~~~  212 (221)
                      ..|...-..|+|-|+.|..+. ...|..||||+++... .....=++|+++|++|.      --|.++|+-.+...+.++
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC  510 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC  510 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence            345666678999999999998 4568899999997632 33345678999999884      357788888888888999


Q ss_pred             EEEEcc
Q 036177          213 LVYEFI  218 (221)
Q Consensus       213 lv~e~~  218 (221)
                      ||+|-+
T Consensus       511 lVFE~L  516 (752)
T KOG0670|consen  511 LVFEPL  516 (752)
T ss_pred             EEehhh
Confidence            999864

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=96.75  E-value=9.3e-05  Score=60.25  Aligned_cols=82  Identities=22%  Similarity=0.263  Sum_probs=64.4

Q ss_pred             cCccccceecccCceEEEEEEeCCC-cEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDG-RIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~-~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      .+++....||-|+||.|=....... ...|+|.++.   -+....+-...|-.+|.+.+.|.||+|+--+.++.+.||+|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm  499 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM  499 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence            4556677899999999987776332 2478887754   33344556889999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      |-+-+|
T Consensus       500 EaClGG  505 (732)
T KOG0614|consen  500 EACLGG  505 (732)
T ss_pred             HhhcCc
Confidence            977665

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.72  E-value=0.0037  Score=44.46  Aligned_cols=72  Identities=19%  Similarity=0.251  Sum_probs=51.4

Q ss_pred             ccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceee-eeeEEEeCCeeEEEEEcccC
Q 036177          142 YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVK-LLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.....|++|.++.||.+.| .|..+|+|.-+..+  .+..+..|+++|..+...++.+ ++.+    +...+.|||..+
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~y----g~~~i~me~i~G   96 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEW-RGGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFY----GEDFIRMEYIDG   96 (201)
T ss_pred             hhhhhhhhcccccEEEEeec-cCceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEe----chhhhhhhhhcC
Confidence            34467899999999999999 66689999776433  3567899999998887666643 3322    233455888754

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=96.34  E-value=0.0014  Score=50.44  Aligned_cols=75  Identities=27%  Similarity=0.395  Sum_probs=53.2

Q ss_pred             ccceecccCceEEEEEE-eCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC------eeEEE
Q 036177          144 VSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE------VPLLV  214 (221)
Q Consensus       144 ~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------~~~lv  214 (221)
                      ....+|.|.= .|-.+. .-.++.|++|.+..  ......+.-.+|..+|..+.|+||++++.+.+...      +.|+|
T Consensus        21 nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v   99 (369)
T KOG0665|consen   21 NLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLV   99 (369)
T ss_pred             eecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHH
Confidence            3445666654 333333 12467899997643  33444567789999999999999999999987653      56899


Q ss_pred             EEccc
Q 036177          215 YEFIL  219 (221)
Q Consensus       215 ~e~~~  219 (221)
                      ||||.
T Consensus       100 ~e~m~  104 (369)
T KOG0665|consen  100 MELMD  104 (369)
T ss_pred             HHhhh
Confidence            99986

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.30  E-value=0.0079  Score=30.72  Aligned_cols=33  Identities=52%  Similarity=1.132  Sum_probs=24.4

Q ss_pred             cccccCCCCCCC--CCceeecCCceeeeCCCCccCCC
Q 036177           21 IDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        21 ~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      +++|...  ..|  .+.|.+..+.|.|.|+.+|.+..
T Consensus         2 ~~~C~~~--~~C~~~~~C~~~~~~~~C~C~~g~~g~~   36 (38)
T cd00054           2 IDECASG--NPCQNGGTCVNTVGSYRCSCPPGYTGRN   36 (38)
T ss_pred             cccCCCC--CCcCCCCEeECCCCCeEeECCCCCcCCc
Confidence            4566532  245  67899999999999999997743

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF12191 stn_TNFRSF12A: Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain; InterPro: IPR022316 The tumour necrosis factor (TNF) receptor (TNFR) superfamily comprises more than 20 type-I transmembrane proteins

Probab=96.23  E-value=0.0014  Score=42.94  Aligned_cols=24  Identities=8%  Similarity=0.124  Sum_probs=13.2

Q ss_pred             CCCccCCcccccCC--CCCccccccc
Q 036177            2 QSKSQCSLIFLLKK--LRATDIDECL   25 (221)
Q Consensus         2 ~~~~~c~~~~~~~~--~~c~~~~~C~   25 (221)
                      ++...|+.|+.+|.  ..|-+...|.
T Consensus        31 ~~~~~Cp~G~sWs~dLdkCm~CssC~   56 (129)
T PF12191_consen   31 PGTTPCPRGSSWSADLDKCMSCSSCP   56 (129)
T ss_dssp             CSCSSS-SSEEEETTTTEEEECCCHC
T ss_pred             CCCCCCCCCCcCcccccccccCccCC
Confidence            45678888886643  3355444443

Family members are defined based on similarity in their extracellular domain - a region that contains many cysteine residues arranged in a specific repetitive pattern []. The cysteines allow formation of an extended rod-like structure, responsible for ligand binding []. Upon receptor activation, different intracellular signalling complexes are assembled for different members of the TNFR superfamily, depending on their intracellular domains and sequences []. Activation of TNFRs can therefore induce a range of disparate effects, including cell proliferation, differentiation, survival, or apoptotic cell death, depending upon the receptor involved []. TNFRs are widely distributed and play important roles in many crucial biological processes, such as lymphoid and neuronal development, innate and adaptive immunity, and maintenance of cellular homeostasis []. Drugs that manipulate their signalling have potential roles in the prevention and treatment of many diseases, such as viral infections, coronary heart disease, transplant rejection, and immune disease []. TNF receptor 12 (also known as TWEAK receptor, and fibroblast growth factor-inducible-14 (Fn14)) has been implicated in endothelial cell growth and migration []. The receptor may also play a role in cell-matrix interactions [].; PDB: 2KN0_A 2RPJ_A 2KMZ_A 2EQP_A.

>KOG1219 consensus Uncharacterized conserved protein, contains laminin, cadherin and EGF domains [Signal transduction mechanisms]

Probab=96.20  E-value=0.011  Score=56.33  Aligned_cols=44  Identities=20%  Similarity=0.508  Sum_probs=32.1

Q ss_pred             cCCCCCc-ccccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc
Q 036177           13 LKKLRAT-DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus        13 ~~~~~c~-~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      +.+..|. ++.-|.. .+|.-.|+|....++|.|.||.||+|+.+.
T Consensus      3894 ysG~~CEi~~epC~s-nPC~~GgtCip~~n~f~CnC~~gyTG~~Ce 3938 (4289)
T KOG1219|consen 3894 YSGNHCEIDLEPCAS-NPCLTGGTCIPFYNGFLCNCPNGYTGKRCE 3938 (4289)
T ss_pred             ccCcccccccccccC-CCCCCCCEEEecCCCeeEeCCCCccCceee
Confidence            3456666 4556754 333338899999999999999999986554

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=96.08  E-value=0.0059  Score=28.02  Aligned_cols=20  Identities=40%  Similarity=0.830  Sum_probs=15.9

Q ss_pred             ceeeeCCCCccCCCcc-cccc
Q 036177           42 SYTCDCPIGMYGDGKV-GCRG   61 (221)
Q Consensus        42 ~~~C~C~~g~~~~~~~-~c~~   61 (221)
                      +|+|.|+.||..+++. .|..
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~D   21 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCED   21 (24)
T ss_pred             CEEeeCCCCCcCCCCCCcccc
Confidence            5889999999987765 6653

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=96.03  E-value=0.0047  Score=30.69  Aligned_cols=22  Identities=45%  Similarity=1.108  Sum_probs=19.6

Q ss_pred             CCceeecC-CceeeeCCCCccCC
Q 036177           33 EGKCKNTI-GSYTCDCPIGMYGD   54 (221)
Q Consensus        33 ~~~C~~~~-~~~~C~C~~g~~~~   54 (221)
                      .++|.... ++|.|.|+.||.|.
T Consensus         9 ~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    9 GGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             TEEEEEESTSEEEEEEBTTEEST
T ss_pred             CeEEEeCCCCCEEeECCCCCccC
Confidence            68999988 99999999999875

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=95.86  E-value=0.018  Score=48.23  Aligned_cols=29  Identities=28%  Similarity=0.381  Sum_probs=26.5

Q ss_pred             ceecccCceEEEEEEeCCCcEEEEEeccC
Q 036177          146 RIIGQGGQGTVFKGMLTDGRIVAVKKSKS  174 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~~~~vavk~~~~  174 (221)
                      +-|+.++.|+||+|.+.+|+.||||+.++
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrP  159 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRP  159 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCC
Confidence            56889999999999998999999998876

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=95.83  E-value=0.003  Score=42.12  Aligned_cols=31  Identities=26%  Similarity=0.294  Sum_probs=27.5

Q ss_pred             ceecccCceEEEEEEeCCCcEEEEEeccCCC
Q 036177          146 RIIGQGGQGTVFKGMLTDGRIVAVKKSKSVH  176 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~  176 (221)
                      .-|+.++.|+||+|.+.+|+.||||..++.-
T Consensus        17 ~PlasASiaQVh~a~l~~g~~VaVKV~rP~i   47 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEEVAVKVQRPGI   47 (119)
T ss_pred             chhhheehhhheeeeecccchhhhhhcchHH
Confidence            4689999999999999899999999987743

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=95.53  E-value=0.025  Score=28.32  Aligned_cols=22  Identities=59%  Similarity=1.161  Sum_probs=19.8

Q ss_pred             CCceeecCCceeeeCCCCccCC
Q 036177           33 EGKCKNTIGSYTCDCPIGMYGD   54 (221)
Q Consensus        33 ~~~C~~~~~~~~C~C~~g~~~~   54 (221)
                      ++.|.+..+.+.|.|+.||.++
T Consensus        11 ~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053          11 GGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCEEecCCCCeEeECCCCCccc
Confidence            4899999999999999999877

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=95.53  E-value=0.019  Score=48.75  Aligned_cols=58  Identities=26%  Similarity=0.206  Sum_probs=45.6

Q ss_pred             eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          161 LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       161 ~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      ..++..|.|...+..+........+-++.|+.++||||++++.........|||+|-+
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV   91 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV   91 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc
Confidence            3467778888776645444455677888999999999999999888888999999853

>KOG1214 consensus Nidogen and related basement membrane protein proteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=95.45  E-value=0.012  Score=50.95  Aligned_cols=51  Identities=27%  Similarity=0.504  Sum_probs=41.3

Q ss_pred             ccCCcccccCCCCCcccccccCCCCCCC--CCceeecCCceeeeCCCCccCCCc
Q 036177            5 SQCSLIFLLKKLRATDIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus         5 ~~c~~~~~~~~~~c~~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      -.|+.+|-.|...|.|.++|.. .+..|  +..|.|.+++++|.|..+|...++
T Consensus       718 cecs~g~~gdgr~c~d~~eca~-~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd  770 (1289)
T KOG1214|consen  718 CECSSGYQGDGRNCVDENECAT-GFHRCGPNSVCINLPGSYRCECRSGYEFADD  770 (1289)
T ss_pred             EEEeeccCCCCCCCCChhhhcc-CCCCCCCCceeecCCCceeEEEeecceeccC
Confidence            3467788788999999999965 44456  889999999999999998865554

>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]

Probab=95.32  E-value=0.0022  Score=55.32  Aligned_cols=31  Identities=26%  Similarity=0.565  Sum_probs=27.8

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEe
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGML  161 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~  161 (221)
                      +..++|+..++ +...+.+|+|+||.||.|..
T Consensus       985 yv~deWe~~r~-it~~relg~gsfg~Vy~g~~ 1015 (1025)
T KOG4258|consen  985 YVPDEWEVSRE-ITLGRELGQGSFGMVYEGNA 1015 (1025)
T ss_pred             CChhHHHHHHH-HhhhhhhccCccceEEEecC
Confidence            56789999888 88999999999999999975

>smart00181 EGF Epidermal growth factor-like domain

Probab=94.94  E-value=0.042  Score=27.56  Aligned_cols=24  Identities=58%  Similarity=1.215  Sum_probs=20.2

Q ss_pred             CCCC-ceeecCCceeeeCCCCccCC
Q 036177           31 HCEG-KCKNTIGSYTCDCPIGMYGD   54 (221)
Q Consensus        31 ~c~~-~C~~~~~~~~C~C~~g~~~~   54 (221)
                      .|.. .|.+..+++.|.|+.||.++
T Consensus         7 ~C~~~~C~~~~~~~~C~C~~g~~g~   31 (35)
T smart00181        7 PCSNGTCINTPGSYTCSCPPGYTGD   31 (35)
T ss_pred             CCCCCEEECCCCCeEeECCCCCccC
Confidence            5633 89999999999999999874

>PLN02876 acyl-CoA dehydrogenase

Probab=94.89  E-value=0.14  Score=45.95  Aligned_cols=76  Identities=16%  Similarity=0.306  Sum_probs=53.3

Q ss_pred             cceecccCceEEEEEEeCCC---cEEEEEeccCCC-cccHHHHHHHHHHHHcCC-CCce--eeeeeEEEeC---CeeEEE
Q 036177          145 SRIIGQGGQGTVFKGMLTDG---RIVAVKKSKSVH-ESNVEQFINEVVILSQIN-HRNV--VKLLGCCLET---EVPLLV  214 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~---~~vavk~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni--v~l~g~~~~~---~~~~lv  214 (221)
                      ...++.|.+..+|.-.+..+   ..+++|+..... ......+.+|.++|+.+. |+++  .+.++.+...   +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            45678899999998776443   356666654322 223457889999999985 6665  6777777653   467899


Q ss_pred             EEcccC
Q 036177          215 YEFILN  220 (221)
Q Consensus       215 ~e~~~~  220 (221)
                      |||+++
T Consensus       123 ME~v~G  128 (822)
T PLN02876        123 MEYLEG  128 (822)
T ss_pred             EEecCC
Confidence            999874

>KOG4289 consensus Cadherin EGF LAG seven-pass G-type receptor [Signal transduction mechanisms]

Probab=94.87  E-value=0.026  Score=51.75  Aligned_cols=48  Identities=29%  Similarity=0.666  Sum_probs=38.1

Q ss_pred             cCCcccccCCCCCc-ccccccCCCCCCCCCceeecCCceeeeCCCCccCCCc
Q 036177            6 QCSLIFLLKKLRAT-DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus         6 ~c~~~~~~~~~~c~-~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      .|++||+.|  .|. .++.|-. ++|.-+|.|....|+|+|.|..||.|.-+
T Consensus      1225 rCPpGFTgd--~CeTeiDlCYs-~pC~nng~C~srEggYtCeCrpg~tGehC 1273 (2531)
T KOG4289|consen 1225 RCPPGFTGD--YCETEIDLCYS-GPCGNNGRCRSREGGYTCECRPGFTGEHC 1273 (2531)
T ss_pred             eCCCCCCcc--cccchhHhhhc-CCCCCCCceEEecCceeEEecCCccccce
Confidence            489999887  454 5888865 43344899999999999999999988654

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=94.55  E-value=0.076  Score=44.18  Aligned_cols=67  Identities=21%  Similarity=0.268  Sum_probs=48.7

Q ss_pred             eEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe----CCeeEEEEEcccC
Q 036177          154 GTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE----TEVPLLVYEFILN  220 (221)
Q Consensus       154 g~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~----~~~~~lv~e~~~~  220 (221)
                      .+.|++. -.+|..+.+|+++.........-..=+++++++.|+|+|.|..+...    ...+.+|++|.|.
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~  361 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPS  361 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCC
Confidence            4567776 34788899999854333333334455678999999999999988763    3567899999875

>PRK10593 hypothetical protein; Provisional

Probab=94.28  E-value=0.28  Score=38.36  Aligned_cols=74  Identities=14%  Similarity=0.075  Sum_probs=52.3

Q ss_pred             ccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCC---CceeeeeeEEEe---CCeeEEEEEc
Q 036177          144 VSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINH---RNVVKLLGCCLE---TEVPLLVYEF  217 (221)
Q Consensus       144 ~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~g~~~~---~~~~~lv~e~  217 (221)
                      -.+.||.|..+.||.-...+++ +.+|..+..  .....|.+|+..|+.+..   -.+.+.++.+..   .+..+||||+
T Consensus        18 ~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~   94 (297)
T PRK10593         18 RVECISEQPYAALWALYDSQGN-PMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER   94 (297)
T ss_pred             eeeecCCccceeEEEEEcCCCC-EEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence            3567999999999998765554 555664331  123578999999988842   356777877643   3568999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus        95 i~G   97 (297)
T PRK10593         95 LRG   97 (297)
T ss_pred             cCC
Confidence            875

>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world

Probab=94.26  E-value=0.047  Score=42.32  Aligned_cols=15  Identities=0%  Similarity=0.363  Sum_probs=7.6

Q ss_pred             HHHHHHHHHHHHHhh
Q 036177           83 IGLWRWYKFIKRRRK   97 (221)
Q Consensus        83 ~~~~~~~~~~~~~~~   97 (221)
                      +++++++||||+++.
T Consensus       273 vIIYLILRYRRKKKm  287 (299)
T PF02009_consen  273 VIIYLILRYRRKKKM  287 (299)
T ss_pred             HHHHHHHHHHHHhhh
Confidence            445555555554443

Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=93.75  E-value=0.032  Score=28.99  Aligned_cols=17  Identities=29%  Similarity=0.747  Sum_probs=8.5

Q ss_pred             EEeeechhhhHHHHHHH
Q 036177           65 ITIVAGCVVVLGLLFLL   81 (221)
Q Consensus        65 ~~i~~~~~~~~~~~~~~   81 (221)
                      +++..++++.+++++++
T Consensus        11 vaIa~~VvVPV~vI~~v   27 (40)
T PF08693_consen   11 VAIAVGVVVPVGVIIIV   27 (40)
T ss_pred             EEEEEEEEechHHHHHH
Confidence            44555555555554444

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=93.63  E-value=0.15  Score=43.06  Aligned_cols=30  Identities=27%  Similarity=0.316  Sum_probs=26.7

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEeccC
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSKS  174 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~~  174 (221)
                      .+.|+.-+.|+|+++++++|..||||+.++
T Consensus       166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P  195 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKNGEDVAVKVQHP  195 (538)
T ss_pred             cchhhhcchhheEEEEecCCCEEEEEecCc
Confidence            356889999999999999999999998776

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=93.56  E-value=0.014  Score=48.06  Aligned_cols=72  Identities=22%  Similarity=0.416  Sum_probs=56.0

Q ss_pred             hhccCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      ....++.....+|.|+||+|+.+.. .++...|||.+.- .........++|+..++++.|++++++.-.+..+
T Consensus        46 r~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~  119 (516)
T KOG1033|consen   46 REANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYER  119 (516)
T ss_pred             hhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecC
Confidence            3446678889999999999999874 3455789998754 4444556788999999999999999987766543

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=93.34  E-value=0.74  Score=37.60  Aligned_cols=74  Identities=24%  Similarity=0.233  Sum_probs=51.5

Q ss_pred             cceecccCceEEEEEEeCCC-cEEEEEeccCC-----C--cccHHHHHHHHHHHHcCC---CCceeeeeeEEEeCCeeEE
Q 036177          145 SRIIGQGGQGTVFKGMLTDG-RIVAVKKSKSV-----H--ESNVEQFINEVVILSQIN---HRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~-~~vavk~~~~~-----~--~~~~~~~~~e~~~l~~l~---h~niv~l~g~~~~~~~~~l  213 (221)
                      .+.||.|.+..||+....+| +.+.||.-.+.     .  +...+.+..|.+.|..+.   ..++.+++.+.  .+..++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--EELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCCCEE
Confidence            35789999999999998776 48999975421     1  123456778888888762   24456666553  344689


Q ss_pred             EEEcccC
Q 036177          214 VYEFILN  220 (221)
Q Consensus       214 v~e~~~~  220 (221)
                      ||||+++
T Consensus       109 VME~L~~  115 (401)
T PRK09550        109 VMEDLSD  115 (401)
T ss_pred             EEecCCC
Confidence            9999874

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=92.88  E-value=0.45  Score=36.58  Aligned_cols=74  Identities=24%  Similarity=0.263  Sum_probs=51.3

Q ss_pred             cccceecccCceEEEEEEeCCCcEEEEEeccCCCcc----------------------cHHHHHHHHHHHHcCCCC--ce
Q 036177          143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHES----------------------NVEQFINEVVILSQINHR--NV  198 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~--ni  198 (221)
                      .+.+.||-|.-+.||.+..+.|..+++|.=+....+                      .+....+|.+.|..|...  .+
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V  173 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV  173 (304)
T ss_pred             hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence            457899999999999999989999999953221111                      123467888889888543  45


Q ss_pred             eeeeeEEEeCCeeEEEEEcccC
Q 036177          199 VKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       199 v~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      .+.++.    +.-.+||||..+
T Consensus       174 P~P~~~----nRHaVvMe~ieG  191 (304)
T COG0478         174 PKPIAW----NRHAVVMEYIEG  191 (304)
T ss_pred             CCcccc----ccceeeeehccc
Confidence            554432    345789998754

>PTZ00046 rifin; Provisional

Probab=92.65  E-value=0.064  Score=42.34  Aligned_cols=30  Identities=10%  Similarity=0.472  Sum_probs=13.8

Q ss_pred             eeechhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 036177           67 IVAGCVVVLGLLFLLPIGLWRWYKFIKRRRK   97 (221)
Q Consensus        67 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (221)
                      |++++++++++++++ +++++++||||+++-
T Consensus       317 IiaSiiAIvVIVLIM-vIIYLILRYRRKKKM  346 (358)
T PTZ00046        317 IIASIVAIVVIVLIM-VIIYLILRYRRKKKM  346 (358)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHhhhcchh
Confidence            334444444444443 445555555555443

>TIGR01477 RIFIN variant surface antigen, rifin family

Probab=92.53  E-value=0.069  Score=42.03  Aligned_cols=30  Identities=10%  Similarity=0.480  Sum_probs=13.8

Q ss_pred             eeechhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 036177           67 IVAGCVVVLGLLFLLPIGLWRWYKFIKRRRK   97 (221)
Q Consensus        67 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (221)
                      |++++++++++++++ +++++++||||+++-
T Consensus       312 IiaSiIAIvvIVLIM-vIIYLILRYRRKKKM  341 (353)
T TIGR01477       312 IIASIIAILIIVLIM-VIIYLILRYRRKKKM  341 (353)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHhhhcchh
Confidence            334444444444433 445555555555443

This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=92.42  E-value=0.17  Score=34.30  Aligned_cols=13  Identities=15%  Similarity=0.194  Sum_probs=6.1

Q ss_pred             HHHHHHHHHHHHH
Q 036177           83 IGLWRWYKFIKRR   95 (221)
Q Consensus        83 ~~~~~~~~~~~~~   95 (221)
                      ++++++.++++|+
T Consensus        17 ~~~~~~~rRR~r~   29 (130)
T PF12273_consen   17 FLFYCHNRRRRRR   29 (130)
T ss_pred             HHHHHHHHHHhhc
Confidence            3334444555554

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=92.37  E-value=0.77  Score=33.62  Aligned_cols=74  Identities=20%  Similarity=0.207  Sum_probs=53.2

Q ss_pred             ccceecccCceEEEEEEeCCCcEEEEEeccCCC----------------cccHHHHHHHHHHHHcCC------CCceeee
Q 036177          144 VSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVH----------------ESNVEQFINEVVILSQIN------HRNVVKL  201 (221)
Q Consensus       144 ~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~----------------~~~~~~~~~e~~~l~~l~------h~niv~l  201 (221)
                      ....||+|+.-.+|....  .....||+.+...                .....++.+|+.-...+.      +.+|.++
T Consensus         5 ~~~~i~~G~~R~cy~HP~--dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~   82 (199)
T PF10707_consen    5 ESDLIAQGGERDCYQHPD--DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF   82 (199)
T ss_pred             CCcccccCCCceEEECCC--CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence            356799999998887653  3446777766533                223456777776655554      8899999


Q ss_pred             eeEEEeCCeeEEEEEccc
Q 036177          202 LGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       202 ~g~~~~~~~~~lv~e~~~  219 (221)
                      +|...++.-+.+|+|...
T Consensus        83 ~G~veT~~G~Glv~e~I~  100 (199)
T PF10707_consen   83 YGFVETNLGLGLVVELIR  100 (199)
T ss_pred             eEEEecCCceEEEEEEEE
Confidence            999998888889998753

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF12955 DUF3844: Domain of unknown function (DUF3844); InterPro: IPR024382 This presumed domain is found in fungal species

Probab=92.31  E-value=0.12  Score=33.21  Aligned_cols=33  Identities=18%  Similarity=0.531  Sum_probs=19.2

Q ss_pred             ccccC-CCCCCCCCceeec-----CCceeeeCCCCccCC
Q 036177           22 DECLD-KEKYHCEGKCKNT-----IGSYTCDCPIGMYGD   54 (221)
Q Consensus        22 ~~C~~-~~~~~c~~~C~~~-----~~~~~C~C~~g~~~~   54 (221)
                      +.|+. .++++-+|.|...     .+-|.|.|......+
T Consensus         6 ~aC~~~Tn~CsgHG~C~~~~~~~~~~C~~C~C~~T~~~~   44 (103)
T PF12955_consen    6 DACENATNNCSGHGSCVKKYGSGGGDCFACKCKPTVVKT   44 (103)
T ss_pred             HHHHHhccCCCCCceEeeccCCCccceEEEEeecccccc
Confidence            45654 2222237888874     255779998765443

It contains 8 largely conserved cysteine residues. This domain is found in proteins thought to be located in the endoplasmic reticulum.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=92.14  E-value=1.1  Score=32.81  Aligned_cols=71  Identities=17%  Similarity=0.129  Sum_probs=45.7

Q ss_pred             ceecccCceEEEEEEeCC-------CcEEEEEeccCC-------------C---------cccHHHHH----HHHHHHHc
Q 036177          146 RIIGQGGQGTVFKGMLTD-------GRIVAVKKSKSV-------------H---------ESNVEQFI----NEVVILSQ  192 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~-------~~~vavk~~~~~-------------~---------~~~~~~~~----~e~~~l~~  192 (221)
                      -.||.|.-+.||.|...+       +..+|+|..+..             +         ......+.    +|...|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            368899999999997533       468999953210             0         11122333    79999988


Q ss_pred             CC--CCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          193 IN--HRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       193 l~--h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.  .-++...++.    ..-+|+|||+.+
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~  108 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGD  108 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCC
Confidence            84  3455555543    456899999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=91.97  E-value=1.1  Score=32.92  Aligned_cols=72  Identities=21%  Similarity=0.284  Sum_probs=49.6

Q ss_pred             ceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCC--CceeeeeeEEEe---CCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINH--RNVVKLLGCCLE---TEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~g~~~~---~~~~~lv~e~~~~  220 (221)
                      +.++.|..+.+|+....+ ..+++|.....  .....+.+|..++..+..  ..+.+++.....   ....+++|+++++
T Consensus         3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g   79 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG   79 (239)
T ss_dssp             EEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred             ccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence            468889999999999866 68899986553  345667888888887732  235566654433   2346889998764

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=91.92  E-value=0.99  Score=35.15  Aligned_cols=74  Identities=22%  Similarity=0.210  Sum_probs=46.7

Q ss_pred             cccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC---CCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI---NHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      +..+.++-|....+|+-. .++..+-+|.-..   .....|..|++-|+.|   .--.+.+.++.....+..+|++||++
T Consensus        20 ~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~---~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~   95 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD-TDGGSYFVKVNSE---SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLE   95 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE-TTS-EEEEEEEEG---GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE---
T ss_pred             eeeEecCCCChhheEEEE-CCCccEEEEecCh---hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeec
Confidence            335668888899988877 4777888887652   2335688898888877   34556778888777777799999986


Q ss_pred             C
Q 036177          220 N  220 (221)
Q Consensus       220 ~  220 (221)
                      .
T Consensus        96 ~   96 (288)
T PF03881_consen   96 M   96 (288)
T ss_dssp             -
T ss_pred             C
Confidence            4

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=91.56  E-value=0.75  Score=33.76  Aligned_cols=65  Identities=28%  Similarity=0.424  Sum_probs=48.2

Q ss_pred             cCccccceecccCc-eEEEEEEeCCCcEEEEEeccC----CC-------c----------ccHHHHHHHHHHHHcCC---
Q 036177          140 DNYKVSRIIGQGGQ-GTVFKGMLTDGRIVAVKKSKS----VH-------E----------SNVEQFINEVVILSQIN---  194 (221)
Q Consensus       140 ~~~~~~~~lg~G~f-g~v~~~~~~~~~~vavk~~~~----~~-------~----------~~~~~~~~e~~~l~~l~---  194 (221)
                      .+++..+.||.|.. |.||+... +|..+|+|..+.    ..       .          .....|..|.+..++|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            67888999999999 99999999 788999998211    00       0          11235888998888774   


Q ss_pred             CCce--eeeeeEE
Q 036177          195 HRNV--VKLLGCC  205 (221)
Q Consensus       195 h~ni--v~l~g~~  205 (221)
                      +.++  |+.+|+.
T Consensus       116 ~e~~~Avkc~Gyl  128 (207)
T PF13095_consen  116 REGLWAVKCHGYL  128 (207)
T ss_pred             ccCceEEEeeEEE
Confidence            4455  8888876

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=91.50  E-value=0.099  Score=20.15  Aligned_cols=12  Identities=50%  Similarity=1.149  Sum_probs=8.6

Q ss_pred             eeeCCCCccCCC
Q 036177           44 TCDCPIGMYGDG   55 (221)
Q Consensus        44 ~C~C~~g~~~~~   55 (221)
                      .|.|+.||.|..
T Consensus         1 ~C~C~~G~~G~~   12 (13)
T PF12661_consen    1 TCQCPPGWTGPN   12 (13)
T ss_dssp             EEEE-TTEETTT
T ss_pred             CccCcCCCcCCC
Confidence            488999998764

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=91.43  E-value=0.79  Score=34.29  Aligned_cols=70  Identities=16%  Similarity=0.165  Sum_probs=47.7

Q ss_pred             ceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCc--eeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN--VVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      ..+|+|.-+.||+.   .+...++|......  ......+|.++|+.+..-.  +.+.+++....+...++||++++
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence            46899999999973   24456677765422  2345688999998775333  34556666666667789999875

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=91.34  E-value=0.039  Score=37.87  Aligned_cols=6  Identities=50%  Similarity=0.894  Sum_probs=2.3

Q ss_pred             EEeeec
Q 036177           65 ITIVAG   70 (221)
Q Consensus        65 ~~i~~~   70 (221)
                      +.++++
T Consensus        52 IGvVVG   57 (154)
T PF04478_consen   52 IGVVVG   57 (154)
T ss_pred             EEEEec
Confidence            333333

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=91.22  E-value=1  Score=33.80  Aligned_cols=63  Identities=13%  Similarity=0.021  Sum_probs=43.0

Q ss_pred             eEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          154 GTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       154 g~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      ..||+.... +..+.+|......   ...+.+|++++..+ .+--+.++++.....+..++|||++++
T Consensus        13 ~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G   76 (244)
T cd05150          13 ATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPG   76 (244)
T ss_pred             CeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCC
Confidence            678888763 4667788775433   33567899888877 343455667666555667899999875

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=91.06  E-value=1.4  Score=32.12  Aligned_cols=75  Identities=19%  Similarity=0.187  Sum_probs=48.5

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEeccC--------CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSKS--------VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~~--------~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ...+-+|+-+.|+++.+ .|+...||.-.+        ...-....-.+|++.|.+.+--.|.-..=+..+...-.|.||
T Consensus        12 l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME   90 (229)
T KOG3087|consen   12 LELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME   90 (229)
T ss_pred             ceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence            56788999999999998 777777774221        111123457889999998754444332223334444568899


Q ss_pred             cccC
Q 036177          217 FILN  220 (221)
Q Consensus       217 ~~~~  220 (221)
                      |.++
T Consensus        91 ~~~g   94 (229)
T KOG3087|consen   91 FIDG   94 (229)
T ss_pred             eccc
Confidence            8764

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=90.99  E-value=0.39  Score=23.74  Aligned_cols=21  Identities=29%  Similarity=0.665  Sum_probs=16.2

Q ss_pred             CCceeecCCceeeeCCCCccCCC
Q 036177           33 EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        33 ~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      +|+|...  ...|.|++||.|..
T Consensus        11 ~G~C~~~--~g~C~C~~g~~G~~   31 (32)
T PF07974_consen   11 HGTCVSP--CGRCVCDSGYTGPD   31 (32)
T ss_pred             CCEEeCC--CCEEECCCCCcCCC
Confidence            6778765  45699999998864

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=90.88  E-value=1.4  Score=31.94  Aligned_cols=73  Identities=21%  Similarity=0.246  Sum_probs=47.6

Q ss_pred             eecccCceEEEEEEeCCCcEEEEEeccC--CCcc------cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          147 IIGQGGQGTVFKGMLTDGRIVAVKKSKS--VHES------NVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       147 ~lg~G~fg~v~~~~~~~~~~vavk~~~~--~~~~------~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      .+++|+-+.++.+.+ -|..+.+|.-.+  -.-.      ..+.-.+|+++|++++--.|....=+..+.....|+|||.
T Consensus         3 ~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           3 LIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             hhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            567899999999977 455566664221  1111      1234678999999886555544444455666778999998


Q ss_pred             cC
Q 036177          219 LN  220 (221)
Q Consensus       219 ~~  220 (221)
                      ++
T Consensus        82 ~G   83 (204)
T COG3642          82 EG   83 (204)
T ss_pred             CC
Confidence            75

>PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein)

Probab=90.16  E-value=0.73  Score=37.63  Aligned_cols=10  Identities=10%  Similarity=0.188  Sum_probs=4.9

Q ss_pred             CccCCccccc
Q 036177            4 KSQCSLIFLL   13 (221)
Q Consensus         4 ~~~c~~~~~~   13 (221)
                      |.+|..||..
T Consensus       303 Ct~C~~Gyy~  312 (397)
T PF03302_consen  303 CTACADGYYK  312 (397)
T ss_pred             ccchhccccc
Confidence            4445555543

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=90.15  E-value=0.4  Score=30.57  Aligned_cols=9  Identities=33%  Similarity=0.671  Sum_probs=4.9

Q ss_pred             eCCCCccCC
Q 036177           46 DCPIGMYGD   54 (221)
Q Consensus        46 ~C~~g~~~~   54 (221)
                      .|.++|..+
T Consensus        41 ~C~~GY~~~   49 (96)
T PTZ00382         41 ECNSGFSLD   49 (96)
T ss_pred             cCcCCcccC
Confidence            455665543

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=89.08  E-value=3.4  Score=29.96  Aligned_cols=61  Identities=26%  Similarity=0.220  Sum_probs=37.0

Q ss_pred             EEEEEEeCCCcEEEEEeccCCCcc--------------------------cHHHHHHHHHHHHcCCCC--ceeeeeeEEE
Q 036177          155 TVFKGMLTDGRIVAVKKSKSVHES--------------------------NVEQFINEVVILSQINHR--NVVKLLGCCL  206 (221)
Q Consensus       155 ~v~~~~~~~~~~vavk~~~~~~~~--------------------------~~~~~~~e~~~l~~l~h~--niv~l~g~~~  206 (221)
                      .||.|...++..+|+|.-+....+                          ......+|.+.|.++..-  ++.+++.+. 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            388898878899999964321100                          023467899999999655  455555332 


Q ss_pred             eCCeeEEEEEccc
Q 036177          207 ETEVPLLVYEFIL  219 (221)
Q Consensus       207 ~~~~~~lv~e~~~  219 (221)
                         .-.|||||++
T Consensus        80 ---~~~ivME~I~   89 (188)
T PF01163_consen   80 ---RNVIVMEYIG   89 (188)
T ss_dssp             ---TTEEEEE--E
T ss_pred             ---CCEEEEEecC
Confidence               3479999987

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF09064 Tme5_EGF_like: Thrombomodulin like fifth domain, EGF-like; InterPro: IPR015149 This domain adopts a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet

Probab=88.11  E-value=0.51  Score=23.47  Aligned_cols=13  Identities=38%  Similarity=0.705  Sum_probs=10.9

Q ss_pred             eeeCCCCccCCCc
Q 036177           44 TCDCPIGMYGDGK   56 (221)
Q Consensus        44 ~C~C~~g~~~~~~   56 (221)
                      +|.||+||..+..
T Consensus        19 ~C~CPeGyIlde~   31 (34)
T PF09064_consen   19 QCFCPEGYILDEG   31 (34)
T ss_pred             ceeCCCceEecCC
Confidence            6999999987764

Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C []. ; GO: 0004888 transmembrane signaling receptor activity, 0016021 integral to membrane

>PF08114 PMP1_2: ATPase proteolipid family; InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase

Probab=87.63  E-value=2  Score=22.25  Aligned_cols=10  Identities=20%  Similarity=0.291  Sum_probs=3.8

Q ss_pred             HHHHHHHHHh
Q 036177           87 RWYKFIKRRR   96 (221)
Q Consensus        87 ~~~~~~~~~~   96 (221)
                      +.+++...|+
T Consensus        28 ~iYRKw~aRk   37 (43)
T PF08114_consen   28 FIYRKWQARK   37 (43)
T ss_pred             HHHHHHHHHH
Confidence            3344333333

Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].

>KOG1226 consensus Integrin beta subunit (N-terminal portion of extracellular region) [Signal transduction mechanisms; Extracellular structures]

Probab=87.35  E-value=2.1  Score=37.44  Aligned_cols=7  Identities=14%  Similarity=0.168  Sum_probs=4.3

Q ss_pred             CCccccc
Q 036177            7 CSLIFLL   13 (221)
Q Consensus         7 c~~~~~~   13 (221)
                      |.+||+.
T Consensus       570 C~~GwtG  576 (783)
T KOG1226|consen  570 CNPGWTG  576 (783)
T ss_pred             cCCCCcc
Confidence            5666654

>PF15102 TMEM154: TMEM154 protein family

Probab=87.25  E-value=0.24  Score=33.89  Aligned_cols=25  Identities=32%  Similarity=0.449  Sum_probs=11.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHh
Q 036177           72 VVVLGLLFLLPIGLWRWYKFIKRRR   96 (221)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~   96 (221)
                      ++.+++++++++.++++..++||+|
T Consensus        62 lIP~VLLvlLLl~vV~lv~~~kRkr   86 (146)
T PF15102_consen   62 LIPLVLLVLLLLSVVCLVIYYKRKR   86 (146)
T ss_pred             eHHHHHHHHHHHHHHHheeEEeecc
Confidence            3334445555554444444443333

>PHA02887 EGF-like protein; Provisional

Probab=87.04  E-value=0.54  Score=30.66  Aligned_cols=36  Identities=25%  Similarity=0.589  Sum_probs=25.8

Q ss_pred             cccccCCCCCCC-CCceee--cCCceeeeCCCCccCCCc
Q 036177           21 IDECLDKEKYHC-EGKCKN--TIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        21 ~~~C~~~~~~~c-~~~C~~--~~~~~~C~C~~g~~~~~~   56 (221)
                      ...|.+.-..-| +|.|..  ......|.|+.||.|..+
T Consensus        83 f~pC~~eyk~YCiHG~C~yI~dL~epsCrC~~GYtG~RC  121 (126)
T PHA02887         83 FEKCKNDFNDFCINGECMNIIDLDEKFCICNKGYTGIRC  121 (126)
T ss_pred             ccccChHhhCEeeCCEEEccccCCCceeECCCCcccCCC
Confidence            345664334456 889987  446688999999999863

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=86.52  E-value=0.48  Score=39.77  Aligned_cols=94  Identities=19%  Similarity=0.185  Sum_probs=64.9

Q ss_pred             eeechhh-hhhhccCccccceecccCceEEEEEEe--CCCcEEEEEeccCCCcccH--HHHHHHHHHHHcC-CCCceeee
Q 036177          128 KLFTSKD-LEKATDNYKVSRIIGQGGQGTVFKGML--TDGRIVAVKKSKSVHESNV--EQFINEVVILSQI-NHRNVVKL  201 (221)
Q Consensus       128 ~~~~~~~-~~~~~~~~~~~~~lg~G~fg~v~~~~~--~~~~~vavk~~~~~~~~~~--~~~~~e~~~l~~l-~h~niv~l  201 (221)
                      ..+..++ ......+|.....||.+.|+.|+....  .++..+++|.+........  ..-+.|+.+...+ .|.++++.
T Consensus       252 ~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~  331 (524)
T KOG0601|consen  252 NIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGK  331 (524)
T ss_pred             heecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCC
Confidence            3444445 345667788899999999999998764  3567889987755332222  2234566666666 68889988


Q ss_pred             eeEEEeCCeeEEEEEcccCC
Q 036177          202 LGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       202 ~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ...+.+....++-.||+.+|
T Consensus       332 ~~~W~~~r~~~ip~e~~~~~  351 (524)
T KOG0601|consen  332 NSSWSQLRQGYIPLEFCEGG  351 (524)
T ss_pred             CCCccccccccCchhhhcCc
Confidence            87777777777888887654

>PF08114 PMP1_2: ATPase proteolipid family; InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase

Probab=85.88  E-value=1.9  Score=22.36  Aligned_cols=14  Identities=21%  Similarity=0.396  Sum_probs=6.1

Q ss_pred             HHHHHHHHHHHHHH
Q 036177           81 LPIGLWRWYKFIKR   94 (221)
Q Consensus        81 ~~~~~~~~~~~~~~   94 (221)
                      +..+++.-+..+++
T Consensus        25 va~~iYRKw~aRkr   38 (43)
T PF08114_consen   25 VALFIYRKWQARKR   38 (43)
T ss_pred             HHHHHHHHHHHHHH
Confidence            33444444444444

Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=85.72  E-value=0.13  Score=43.40  Aligned_cols=75  Identities=25%  Similarity=0.332  Sum_probs=53.1

Q ss_pred             eecccCceEEEEEE----eCCCcEEEEEeccCCCc--ccHHHHHHHHHHHHcCC-CCceeeeeeEEEeCCeeEEEEEccc
Q 036177          147 IIGQGGQGTVFKGM----LTDGRIVAVKKSKSVHE--SNVEQFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       147 ~lg~G~fg~v~~~~----~~~~~~vavk~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      ++|+|.||.|+...    -..+...|.|.++..+.  ....-...|..++...+ ||.+|++.-........+++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            36899999987553    12456677776654221  11123456777888885 9999999988888888999999887


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus        81 gg   82 (612)
T KOG0603|consen   81 GG   82 (612)
T ss_pred             cc
Confidence            65

>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains

Probab=84.29  E-value=1.3  Score=32.49  Aligned_cols=10  Identities=10%  Similarity=-0.144  Sum_probs=5.6

Q ss_pred             CeeEEEEEcc
Q 036177          209 EVPLLVYEFI  218 (221)
Q Consensus       209 ~~~~lv~e~~  218 (221)
                      ...|-++|+-
T Consensus       207 SD~yS~~~c~  216 (221)
T PF08374_consen  207 SDPYSDSSCS  216 (221)
T ss_pred             CCcccccccc
Confidence            4556666653

They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=83.96  E-value=0.27  Score=28.39  Aligned_cols=7  Identities=43%  Similarity=0.819  Sum_probs=0.0

Q ss_pred             Eeeechh
Q 036177           66 TIVAGCV   72 (221)
Q Consensus        66 ~i~~~~~   72 (221)
                      +++++++
T Consensus        13 avIaG~V   19 (64)
T PF01034_consen   13 AVIAGGV   19 (64)
T ss_dssp             -------
T ss_pred             HHHHHHH
Confidence            3344433

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=82.82  E-value=0.96  Score=41.48  Aligned_cols=64  Identities=14%  Similarity=0.100  Sum_probs=45.9

Q ss_pred             CccccceecccCceEEEEEEeCCCcEEEEEec-cCCCcccHHHHHHHHHHH--HcCCCCceeeeeeEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKS-KSVHESNVEQFINEVVIL--SQINHRNVVKLLGCC  205 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~-~~~~~~~~~~~~~e~~~l--~~l~h~niv~l~g~~  205 (221)
                      ++...+.||+++|=+|.+++.+.|. |.||+. +..+.-..+.|.++++-.  ...+|||.+++.-.-
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~   90 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVL   90 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHH
Confidence            5667888999999999999986776 888875 444455556666555444  345899999876443

>KOG4260 consensus Uncharacterized conserved protein [Function unknown]

Probab=82.41  E-value=1.7  Score=33.03  Aligned_cols=22  Identities=32%  Similarity=0.487  Sum_probs=16.5

Q ss_pred             cCCceeeeCCCCccCCCccccc
Q 036177           39 TIGSYTCDCPIGMYGDGKVGCR   60 (221)
Q Consensus        39 ~~~~~~C~C~~g~~~~~~~~c~   60 (221)
                      -.|+..|.|..||.|.....|.
T Consensus       164 R~GsGkCkC~~GY~Gp~C~~Cg  185 (350)
T KOG4260|consen  164 REGSGKCKCETGYTGPLCRYCG  185 (350)
T ss_pred             CCCCCcccccCCCCCccccccc
Confidence            3466779999999988766553

>KOG1217 consensus Fibrillins and related proteins containing Ca2+-binding EGF-like domains [Signal transduction mechanisms]

Probab=82.11  E-value=1.8  Score=35.82  Aligned_cols=50  Identities=30%  Similarity=0.577  Sum_probs=38.5

Q ss_pred             CCcccccCC-CCCcccccccCCCCCCCCCceeecCCceeeeCCCCccCCCc
Q 036177            7 CSLIFLLKK-LRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus         7 c~~~~~~~~-~~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      |+.||..+. ..|.++++|.....+.-.+.|.+..+.+.|.|+.+|.+...
T Consensus       256 ~~~g~~~~~~~~~~~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g~~~  306 (487)
T KOG1217|consen  256 CPEGYTGDACVTCVDVDSCALIASCPNGGTCVNVPGSYRCTCPPGFTGRLC  306 (487)
T ss_pred             CCCCccccccceeeeccccCCCCccCCCCeeecCCCcceeeCCCCCCCCCC
Confidence            467777766 57888999986332222789999999899999999998875

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=82.00  E-value=0.35  Score=41.67  Aligned_cols=83  Identities=23%  Similarity=0.255  Sum_probs=55.9

Q ss_pred             ccCccccceecccCceEEEEEEeCC--CcEEEEEeccCCC--cccHHHHHHHHHHHHcCC-CCceeeeeeEEEeCCeeEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTD--GRIVAVKKSKSVH--ESNVEQFINEVVILSQIN-HRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~--~~~vavk~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~l  213 (221)
                      ...+.+.+.||+|+|+.|-......  ...+|+|.+....  .........|..+=..+. |+|++++++.....+..++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            3445566779999999987776423  3446666554322  222222334665555665 9999999999999999999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      .+||..+|
T Consensus        99 ~~~~s~g~  106 (601)
T KOG0590|consen   99 SLSYSDGG  106 (601)
T ss_pred             ccCccccc
Confidence            99996554

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=80.60  E-value=1.9  Score=28.15  Aligned_cols=33  Identities=24%  Similarity=0.366  Sum_probs=21.9

Q ss_pred             cccccCCCCCCCCCceeecCCceeeeCCCCccCC
Q 036177           21 IDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD   54 (221)
Q Consensus        21 ~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~   54 (221)
                      .+.|.....|.-.+.|.. .....|.|..||...
T Consensus        77 ~d~Cd~y~~CG~~g~C~~-~~~~~C~Cl~GF~P~  109 (110)
T PF00954_consen   77 KDQCDVYGFCGPNGICNS-NNSPKCSCLPGFEPK  109 (110)
T ss_pred             ccCCCCccccCCccEeCC-CCCCceECCCCcCCC
Confidence            456765553333789944 455679999999654

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=80.56  E-value=9.1  Score=29.06  Aligned_cols=80  Identities=16%  Similarity=0.154  Sum_probs=0.0

Q ss_pred             CccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      .++..+.+.-|..-.-|.-.. ...++-+|.-.....+....=...++.|++-+.-++.+.+.+-......++|+||++-
T Consensus        17 ~i~er~~v~gG~inea~~v~d-g~~~~FvK~n~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~   95 (286)
T COG3001          17 EIKEREEVSGGDINEAWRLRD-GTDPFFVKCNQREQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPT   95 (286)
T ss_pred             hhhcccccCCccccceeEeec-CCcceEEEecchhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccC


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        96 ~   96 (286)
T COG3001          96 G   96 (286)
T ss_pred             C

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=80.55  E-value=0.68  Score=33.08  Aligned_cols=45  Identities=31%  Similarity=0.626  Sum_probs=0.0

Q ss_pred             CCccccc-CCCCCcccccccC--CCCCCC--CCceeecC-----CceeeeCCCCc
Q 036177            7 CSLIFLL-KKLRATDIDECLD--KEKYHC--EGKCKNTI-----GSYTCDCPIGM   51 (221)
Q Consensus         7 c~~~~~~-~~~~c~~~~~C~~--~~~~~c--~~~C~~~~-----~~~~C~C~~g~   51 (221)
                      |.+||.+ ++.+|....+|..  ..+..|  .+.|.+.+     ..+.|.|..||
T Consensus        24 Cnegfvl~~EntCE~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY   78 (197)
T PF06247_consen   24 CNEGFVLKNENTCEEKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGY   78 (197)
T ss_dssp             ESTTEEEEETTEEEE----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTE
T ss_pred             cCCCcEEccccccccceecCcccccCccccchhhhhcCCCcccceeEEEecccCc

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	221
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-14
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-14
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		4e-08
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		4e-08
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		3e-06
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		3e-06
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		8e-06
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		8e-06
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		9e-06
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		1e-05
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		1e-05
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		1e-05
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		1e-05
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		1e-05
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		1e-05
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		1e-05
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-05
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-05
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		1e-05
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		1e-05
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		1e-05
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		1e-05
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-05
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		1e-05
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-05
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		1e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-05
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-05
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-05
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-05
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-05
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-05
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		3e-05
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		4e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		4e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		5e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		5e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		5e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		5e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		5e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		5e-05
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		5e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		5e-05
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		5e-05
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-05
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		5e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		5e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		5e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		5e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		5e-05
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		6e-05
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		7e-05
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-05
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		7e-05
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		7e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		7e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		8e-05
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		8e-05
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		8e-05
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-05
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-04
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		1e-04
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		1e-04
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		1e-04
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-04
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-04
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		2e-04
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-04
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		2e-04
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-04
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		2e-04
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-04
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-04
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-04
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-04
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		2e-04
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-04
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		2e-04
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-04
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		2e-04
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		3e-04
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		3e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		3e-04
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		3e-04
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-04
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-04
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		3e-04
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		3e-04
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		3e-04
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		3e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		4e-04
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		4e-04
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		4e-04
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-04
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		4e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		4e-04
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		4e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		4e-04
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		4e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		4e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		4e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		4e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		4e-04
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		4e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		4e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		4e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-04
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		4e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		4e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		4e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		4e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		4e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		4e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		5e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		5e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		5e-04
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		5e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		5e-04
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		5e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		5e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		5e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		5e-04
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		5e-04
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		5e-04
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		5e-04
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		6e-04
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		6e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		6e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		6e-04
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		7e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		7e-04
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 121 EGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNV 180
           E ++ + K F+ ++L+ A+DN+    I+G+GG G V+KG L DG +VAVK+ K       
Sbjct: 19  EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGG 78
Query: 181 E-QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           E QF  EV ++S   HRN+++L G C+     LLVY ++ NG
Sbjct: 79  ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 121 EGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNV 180
           E ++ + K F+ ++L+ A+DN+    I+G+GG G V+KG L DG +VAVK+ K       
Sbjct: 11  EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG 70
Query: 181 E-QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           E QF  EV ++S   HRN+++L G C+     LLVY ++ NG
Sbjct: 71  ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 112

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI 193
           DLE+AT+N+    +IG G  G V+KG+L DG  VA+K+        +E+F  E+  LS  
Sbjct: 33  DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFILNG 221
            H ++V L+G C E    +L+Y+++ NG
Sbjct: 93  RHPHLVSLIGFCDERNEMILIYKYMENG 120

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI 193
           DLE+AT+N+    +IG G  G V+KG+L DG  VA+K+        +E+F  E+  LS  
Sbjct: 33  DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFILNG 221
            H ++V L+G C E    +L+Y+++ NG
Sbjct: 93  RHPHLVSLIGFCDERNEMILIYKYMENG 120

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 148 IGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVE-QFINEVVILSQINHRNVVKLLGCC 205
           IG+G  G VF G L  D  +VAVK  +     +++ +F+ E  IL Q +H N+V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 206 LETEVPLLVYEFILNG 221
            + +   +V E +  G
Sbjct: 182 TQKQPIYIVMELVQGG 197

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 148 IGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVE-QFINEVVILSQINHRNVVKLLGCC 205
           IG+G  G VF G L  D  +VAVK  +     +++ +F+ E  IL Q +H N+V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 206 LETEVPLLVYEFILNG 221
            + +   +V E +  G
Sbjct: 182 TQKQPIYIVMELVQGG 197

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 148 IGQGGQGTVF----KGMLT--DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKL 201
           +G+G  G VF      +L   D  +VAVK  K   ES  + F  E  +L+ + H+++V+ 
Sbjct: 26  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 202 LGCCLETEVPLLVYEFILNG 221
            G C E    L+V+E++ +G
Sbjct: 86  FGVCTEGRPLLMVFEYMRHG 105

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 148 IGQGGQGTVF----KGMLT--DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKL 201
           +G+G  G VF      +L   D  +VAVK  K   ES  + F  E  +L+ + H+++V+ 
Sbjct: 20  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 202 LGCCLETEVPLLVYEFILNG 221
            G C E    L+V+E++ +G
Sbjct: 80  FGVCTEGRPLLMVFEYMRHG 99

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 148 IGQGGQGTVF----KGMLT--DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKL 201
           +G+G  G VF      +L   D  +VAVK  K   ES  + F  E  +L+ + H+++V+ 
Sbjct: 49  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 202 LGCCLETEVPLLVYEFILNG 221
            G C E    L+V+E++ +G
Sbjct: 109 FGVCTEGRPLLMVFEYMRHG 128

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 30  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 90  SLLGICLRSEGSPLVVLPYMKHG 112

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 53  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHG 135

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 95  SLLGICLRSEGSPLVVLPYMKHG 117

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 95  SLLGICLRSEGSPLVVLPYMKHG 117

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 33  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 93  SLLGICLRSEGSPLVVLPYMKHG 115

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 54  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHG 136

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHG 114

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 27  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 87  SLLGICLRSEGSPLVVLPYMKHG 109

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 94  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHG 176

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 34  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 94  SLLGICLRSEGSPLVVLPYMKHG 116

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 34  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 94  SLLGICLRSEGSPLVVLPYMKHG 116

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 40  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHG 122

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 95  SLLGICLRSEGSPLVVLPYMKHG 117

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 35  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 95  SLLGICLRSEGSPLVVLPYMKHG 117

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 36  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 96  SLLGICLRSEGSPLVVLPYMKHG 118

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 33  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 93  SLLGICLRSEGSPLVVLPYMKHG 115

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L   DG+ +  AVK    + +   V QF+ E +I+   +H NV+
Sbjct: 36  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 96  SLLGICLRSEGSPLVVLPYMKHG 118

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 130 FTSKDLEKATDN-YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE------- 181
           F    L    DN  +  + IG+GG G V KG L   + V   KS  + +S  E       
Sbjct: 8   FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 182 -QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI 218
            +F  EV I+S +NH N+VKL G  L    P +V EF+
Sbjct: 68  QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFV 103

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 130 FTSKDLEKATDN-YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE------- 181
           F    L    DN  +  + IG+GG G V KG L   + V   KS  + +S  E       
Sbjct: 8   FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 182 -QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI 218
            +F  EV I+S +NH N+VKL G  L    P +V EF+
Sbjct: 68  QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFV 103

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 130 FTSKDLEKATDN-YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE------- 181
           F    L    DN  +  + IG+GG G V KG L   + V   KS  + +S  E       
Sbjct: 8   FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 182 -QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI 218
            +F  EV I+S +NH N+VKL G  L    P +V EF+
Sbjct: 68  QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFV 103

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 130 FTSKDLEKATDNYKVSRI------IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE-- 181
           F+  +L+  T+N+    I      +G+GG G V+KG + +   VAVKK  ++ +   E  
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 182 --QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             QF  E+ ++++  H N+V+LLG   + +   LVY ++ NG
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 130 FTSKDLEKATDNYKVSRI------IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE-- 181
           F+  +L+  T+N+    I      +G+GG G V+KG + +   VAVKK  ++ +   E  
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 182 --QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             QF  E+ ++++  H N+V+LLG   + +   LVY ++ NG
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 130 FTSKDLEKATDNYKVSRI------IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE-- 181
           F+  +L+  T+N+    I      +G+GG G V+KG + +   VAVKK  ++ +   E  
Sbjct: 9   FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 182 --QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             QF  E+ ++++  H N+V+LLG   + +   LVY ++ NG
Sbjct: 68  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 109

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 8/78 (10%)
Query: 143 KVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSV------HESNVEQFINEVVILSQINH 195
           K  +++G G  GTV+KG+ + +G  V +  +  +       ++NVE F++E +I++ ++H
Sbjct: 18  KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDH 76
Query: 196 RNVVKLLGCCLETEVPLL 213
            ++V+LLG CL   + L+
Sbjct: 77  PHLVRLLGVCLSPTIQLV 94

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 8/78 (10%)
Query: 143 KVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSV------HESNVEQFINEVVILSQINH 195
           K  +++G G  GTV+KG+ + +G  V +  +  +       ++NVE F++E +I++ ++H
Sbjct: 41  KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDH 99
Query: 196 RNVVKLLGCCLETEVPLL 213
            ++V+LLG CL   + L+
Sbjct: 100 PHLVRLLGVCLSPTIQLV 117

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 86  EPPFYIITEFMTYG 99

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 81  EPPFYIIIEFMTYG 94

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 81  EPPFYIIIEFMTYG 94

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 81  EPPFYIITEFMTYG 94

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 86  EPPFYIITEFMTYG 99

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 19  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 79  EPPFYIIIEFMTYG 92

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 86  EPPFYIIIEFMTYG 99

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 82  EPPFYIIIEFMTYG 95

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 86  EPPFYIITEFMTYG 99

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 22  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 82  EPPFYIITEFMTYG 95

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 25  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 85  EPPFYIITEFMTYG 98

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 26  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 86  EPPFYIITEFMTYG 99

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 83  EPPFYIITEFMTYG 96

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 19  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 79  EPPFYIITEFMTYG 92

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 83  EPPFYIITEFMTYG 96

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 81  EPPFYIITEFMTYG 94

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 23  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 83  EPPFYIITEFMTYG 96

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 81  EPPFYIITEFMTYG 94

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 21  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 81  EPPFYIITEFMTYG 94

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 34  LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 94  EPPFYIITEFMTYG 107

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKK-SKSVHESNVEQFINEVVILSQ 192
           A ++  ++RI+G+G  G V++G+ T+ +     VAVK   K     N E+F++E VI+  
Sbjct: 6   AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
           ++H ++VKL+G  +E E   ++ E    G
Sbjct: 66  LDHPHIVKLIG-IIEEEPTWIIMELYPYG 93

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKK-SKSVHESNVEQFINEVVILSQ 192
           A ++  ++RI+G+G  G V++G+ T+ +     VAVK   K     N E+F++E VI+  
Sbjct: 10  AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
           ++H ++VKL+G  +E E   ++ E    G
Sbjct: 70  LDHPHIVKLIG-IIEEEPTWIIMELYPYG 97

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 288 EPPFYIITEFMTYG 301

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKK-SKSVHESNVEQFINEVVILSQ 192
           A ++  ++RI+G+G  G V++G+ T+ +     VAVK   K     N E+F++E VI+  
Sbjct: 22  AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
           ++H ++VKL+G  +E E   ++ E    G
Sbjct: 82  LDHPHIVKLIG-IIEEEPTWIIMELYPYG 109

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGML--TDGRIVAVK----KSKSVHESNVEQFINE 186
           +D+      + + R++G+G  G+V +  L   DG  V V     K+  +  S++E+F+ E
Sbjct: 16  EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 187 VVILSQINHRNVVKLLGCCLET------EVPLLVYEFILNG 221
              + + +H +V KL+G  L +       +P+++  F+ +G
Sbjct: 76  AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHG 116

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLL 202
           +V  ++G+G  G V K      + VA+K+ +S  ES  + FI E+  LS++NH N+VKL 
Sbjct: 11  EVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLY 67
Query: 203 GCCL 206
           G CL
Sbjct: 68  GACL 71

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLL 202
           +V  ++G+G  G V K      + VA+K+ +S  ES  + FI E+  LS++NH N+VKL 
Sbjct: 12  EVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLY 68
Query: 203 GCCL 206
           G CL
Sbjct: 69  GACL 72

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 327 EPPFYIITEFMTYG 340

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V++G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 19  LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 208 TEVPLLVYEFILNG 221
                ++ EF+  G
Sbjct: 79  EPPFYIITEFMTYG 92

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 141 NYKVSRIIGQGGQGTVFKG------MLTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN 194
           N  + R +G+G  G VF           D  +VAVK  K   ++  + F  E  +L+ + 
Sbjct: 14  NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 195 HRNVVKLLGCCLETEVPLLVYEFILNG 221
           H ++VK  G C+E +  ++V+E++ +G
Sbjct: 74  HEHIVKFYGVCVEGDPLIMVFEYMKHG 100

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 11/89 (12%)
Query: 144 VSRIIGQGGQGTVFKGML--TDGRI--VAVKKSKSVHESN--VEQFINEVVILSQINHRN 197
           + +I+G+G  G+V +G L   DG    VAVK  K  + S   +E+F++E   +   +H N
Sbjct: 38  LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 198 VVKLLGCCLETEV-----PLLVYEFILNG 221
           V++LLG C+E        P+++  F+  G
Sbjct: 98  VIRLLGVCIEMSSQGIPKPMVILPFMKYG 126

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKS 172
           G+     ++   + E A +   +SR +GQG  G V++G+          T   I  V ++
Sbjct: 1   GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 60
Query: 173 KSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
            S+ E    +F+NE  ++ + N  +VV+LLG   + +  L++ E +  G
Sbjct: 61  ASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 107

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKS 172
           G+     ++   + E A +   +SR +GQG  G V++G+          T   I  V ++
Sbjct: 1   GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 60
Query: 173 KSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
            S+ E    +F+NE  ++ + N  +VV+LLG   + +  L++ E +  G
Sbjct: 61  ASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 107

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSVHESNV-EQFIN 185
           +++D E   +  ++ R IG+G  G V +G+          VA+K  K+    +V E+F+ 
Sbjct: 1   STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
           E + + Q +H ++VKL+G   E  V
Sbjct: 61  EALTMRQFDHPHIVKLIGVITENPV 85

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSVHESNV-EQFIN 185
           +++D E   +  ++ R IG+G  G V +G+          VA+K  K+    +V E+F+ 
Sbjct: 1   STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
           E + + Q +H ++VKL+G   E  V
Sbjct: 61  EALTMRQFDHPHIVKLIGVITENPV 85

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 129 LFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKSKSVHESN 179
           +F   + E A +   +SR +GQG  G V++G+          T   I  V ++ S+ E  
Sbjct: 5   VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 180 VEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             +F+NE  ++ + N  +VV+LLG   + +  L++ E +  G
Sbjct: 65  --EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 104

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSVHESNV-EQFIN 185
           +++D E   +  ++ R IG+G  G V +G+          VA+K  K+    +V E+F+ 
Sbjct: 1   STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
           E + + Q +H ++VKL+G   E  V
Sbjct: 61  EALTMRQFDHPHIVKLIGVITENPV 85

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVHESNV-EQFIN 185
           +++D E   +  ++ R IG+G  G V +G+          VA+K  K+    +V E+F+ 
Sbjct: 1   STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
           E + + Q +H ++VKL+G   E  V
Sbjct: 61  EALTMRQFDHPHIVKLIGVITENPV 85

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVHESNV-EQFIN 185
           +++D E   +  ++ R IG+G  G V +G+          VA+K  K+    +V E+F+ 
Sbjct: 29  STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
           E + + Q +H ++VKL+G   E  V
Sbjct: 89  EALTMRQFDHPHIVKLIGVITENPV 113

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVHESNV-EQFIN 185
           +++D E   +  ++ R IG+G  G V +G+          VA+K  K+    +V E+F+ 
Sbjct: 6   STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
           E + + Q +H ++VKL+G   E  V
Sbjct: 66  EALTMRQFDHPHIVKLIGVITENPV 90

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 130 FTSKDLEKATDNYKVSRI------IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE-- 181
           F+  +L+  T+N+    I       G+GG G V+KG + +   VAVKK  ++ +   E  
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 182 --QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             QF  E+ + ++  H N+V+LLG   + +   LVY +  NG
Sbjct: 65  KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNG 106

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSK--SVHESNVEQFINEVVILSQINHRN 197
           + Y+    +G+G  G V+K   + GRIVA+K+ +  +  E      I E+ +L +++H N
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 198 VVKLLGCCLETEVPLLVYEFI 218
           +V L+          LV+EF+
Sbjct: 81  IVSLIDVIHSERCLTLVFEFM 101

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVHESNV-EQFIN 185
           +++D E   +  ++ R IG+G  G V +G+          VA+K  K+    +V E+F+ 
Sbjct: 3   STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
           E + + Q +H ++VKL+G   E  V
Sbjct: 63  EALTMRQFDHPHIVKLIGVITENPV 87

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVHESNV-EQFIN 185
           +++D E   +  ++ R IG+G  G V +G+          VA+K  K+    +V E+F+ 
Sbjct: 4   STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
           E + + Q +H ++VKL+G   E  V
Sbjct: 64  EALTMRQFDHPHIVKLIGVITENPV 88

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVA 168
           S N        ++   + E A +   +SR +GQG  G V++G+          T   I  
Sbjct: 3   SVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 62
Query: 169 VKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           V ++ S+ E    +F+NE  ++ + N  +VV+LLG   + +  L++ E +  G
Sbjct: 63  VNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 113

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 137 KATDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFI--NEVVILSQI 193
           ++ + Y+   ++G+G  G V K    D GRIVA+KK     +  + + I   E+ +L Q+
Sbjct: 22  QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
            H N+V LL  C + +   LV+EF+
Sbjct: 82  RHENLVNLLEVCKKKKRWYLVFEFV 106

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVA 168
           S N        ++   + E A +   +SR +GQG  G V++G+          T   I  
Sbjct: 3   SVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 62
Query: 169 VKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           V ++ S+ E    +F+NE  ++ + N  +VV+LLG   + +  L++ E +  G
Sbjct: 63  VNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 113

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSK--SVHESNVEQFINEVVILSQINHRN 197
           + Y+    +G+G  G V+K   + GRIVA+K+ +  +  E      I E+ +L +++H N
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 198 VVKLLGCCLETEVPLLVYEFI 218
           +V L+          LV+EF+
Sbjct: 81  IVSLIDVIHSERCLTLVFEFM 101

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVA 168
           S N        ++   + E A +   +SR +GQG  G V++G+          T   I  
Sbjct: 25  SVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 84
Query: 169 VKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           V ++ S+ E    +F+NE  ++ + N  +VV+LLG   + +  L++ E +  G
Sbjct: 85  VNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 135

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           IG G  G V  G   +   VA+K  +    S  E FI E  ++ +++H  +V+L G CLE
Sbjct: 18  IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 208 TEVPLLVYEFILNG 221
                LV+EF+ +G
Sbjct: 77  QAPICLVFEFMEHG 90

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 130 FTSKDLEKATDNY---------KVSRIIGQGGQGTVFKGMLT-DGR---IVAVKKSKSVH 176
           FT +D  +A   +         K+ ++IG G  G V  G L   G+    VA+K  KS +
Sbjct: 14  FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 177 -ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
            E     F++E  I+ Q +H NV+ L G   ++   +++ EF+ NG
Sbjct: 74  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENG 119

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 146 RIIGQGGQGTVFKGML--TDGR---IVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVV 199
           ++IG G  G V+KGML  + G+    VA+K  K+ + E     F+ E  I+ Q +H N++
Sbjct: 50  KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 200 KLLGCCLETEVPLLVYEFILNG 221
           +L G   + +  +++ E++ NG
Sbjct: 110 RLEGVISKYKPMMIITEYMENG 131

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           IG G  G V  G   +   VA+K  +    S  E FI E  ++ +++H  +V+L G CLE
Sbjct: 15  IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 208 TEVPLLVYEFILNG 221
                LV+EF+ +G
Sbjct: 74  QAPICLVFEFMEHG 87

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSVHESNV-EQFIN 185
           +++D E   +  ++ R IG+G  G V +G+          VA+K  K+    +V E+F+ 
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
           E + + Q +H ++VKL+G   E  V
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPV 465

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSVHESNV-EQFIN 185
           +++D E   +  ++ R IG+G  G V +G+          VA+K  K+    +V E+F+ 
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
           E + + Q +H ++VKL+G   E  V
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPV 465

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           IG G  G V  G   +   VA+K  +    S  E FI E  ++ +++H  +V+L G CLE
Sbjct: 15  IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 208 TEVPLLVYEFILNG 221
                LV+EF+ +G
Sbjct: 74  QAPICLVFEFMEHG 87

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           IG G  G V  G   +   VA+K  +    S  E FI E  ++ +++H  +V+L G CLE
Sbjct: 13  IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 208 TEVPLLVYEFILNG 221
                LV+EF+ +G
Sbjct: 72  QAPICLVFEFMEHG 85

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 124 IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKSKS 174
           +    ++   + E A +   +SR +GQG  G V++G+          T   I  V ++ S
Sbjct: 2   VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 61
Query: 175 VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           + E    +F+NE  ++ + N  +VV+LLG   + +  L++ E +  G
Sbjct: 62  MRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 106

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 143 KVSRIIGQGGQGTVFKGMLT-DGR---IVAVKKSKSVH-ESNVEQFINEVVILSQINHRN 197
           K+ ++IG G  G V  G L   G+    VA+K  KS + E     F++E  I+ Q +H N
Sbjct: 10  KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           V+ L G   ++   +++ EF+ NG
Sbjct: 70  VIHLEGVVTKSTPVMIITEFMENG 93

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE--QFINEVVILSQINH 195
            D Y++  +IG G  G V +     + R+VA+KK   V E  ++  + + E+ IL+++NH
Sbjct: 52  PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNH 111
Query: 196 RNVVKLLGCCLETEV 210
            +VVK+L   +  +V
Sbjct: 112 DHVVKVLDIVIPKDV 126

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 124 IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKSKS 174
           +    ++   + E A +   +SR +GQG  G V++G+          T   I  V ++ S
Sbjct: 2   VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 61
Query: 175 VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           + E    +F+NE  ++ + N  +VV+LLG   + +  L++ E +  G
Sbjct: 62  MRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 106

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFK----GMLT--DGRIVAVKKSKSVHESNVE-QFINEVV 188
           E   +N +  R IG+G  G VF+    G+L      +VAVK  K    ++++  F  E  
Sbjct: 43  EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           ++++ ++ N+VKLLG C   +   L++E++  G
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYG 135

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFL 86

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 60  NHPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 60  NHPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 60  NHPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 60  NHPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFL 85

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFL 85

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFL 85

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 61  NHPNIVKLLDVIHTENKLYLVFEFL 85

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 60  NHPNIVKLLDVIHTENKLYLVFEFL 84

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFL 86

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFL 86

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 5   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 64  NHPNIVKLLDVIHTENKLYLVFEFL 88

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 62  NHPNIVKLLDVIHTENKLYLVFEFL 86

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           IG G  G V  G   +   VA+K  K    S  + FI E  ++ +++H  +V+L G CLE
Sbjct: 35  IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 208 TEVPLLVYEFILNG 221
                LV+EF+ +G
Sbjct: 94  QAPICLVFEFMEHG 107

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
           + +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
           NH N+VKLL          LV+EF+
Sbjct: 63  NHPNIVKLLDVIHTENKLYLVFEFL 87

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
           +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++NH
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+VKLL          LV+EF+
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEFL 84

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
           +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++NH
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+VKLL          LV+EF+
Sbjct: 61  PNIVKLLDVIHTENKLYLVFEFL 83

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
           +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++NH
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+VKLL          LV+EF+
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEFL 84

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
           +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++NH
Sbjct: 7   ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+VKLL          LV+EF+
Sbjct: 66  PNIVKLLDVIHTENKLYLVFEFL 88

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
           +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++NH
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+VKLL          LV+EF+
Sbjct: 61  PNIVKLLDVIHTENKLYLVFEFL 83

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
           +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++NH
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+VKLL          LV+EF+
Sbjct: 69  PNIVKLLDVIHTENKLYLVFEFL 91

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
           +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++NH
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+VKLL          LV+EF+
Sbjct: 61  PNIVKLLDVIHTENKLYLVFEFL 83

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
           +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++NH
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+VKLL          LV+EF+
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEFL 84

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 129 LFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKSKSVHESN 179
           ++   + E A +   +SR +GQG  G V++G+          T   I  V ++ S+ E  
Sbjct: 1   VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 180 VEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             +F+NE  ++ + N  +VV+LLG   + +  L++ E +  G
Sbjct: 61  --EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 100

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
           +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++NH
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+VKLL          LV+EF+
Sbjct: 61  PNIVKLLDVIHTENKLYLVFEFL 83

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 129 LFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKSKSVHESN 179
           ++   + E A +   +SR +GQG  G V++G+          T   I  V ++ S+ E  
Sbjct: 4   VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 180 VEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             +F+NE  ++ + N  +VV+LLG   + +  L++ E +  G
Sbjct: 64  --EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 103

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
           +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++NH
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+VKLL          LV+EF+
Sbjct: 63  PNIVKLLDVIHTENKLYLVFEFL 85

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
           +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++NH
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+VKLL          LV+EF+
Sbjct: 62  PNIVKLLDVIHTENKLYLVFEFL 84

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
           +N++    IG+G  G V+K    LT G +VA+KK +   E+       I E+ +L ++NH
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+VKLL          LV+EF+
Sbjct: 69  PNIVKLLDVIHTENKLYLVFEFL 91

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V+ G+     +    K+       VE+F+ E  ++ +I H N+V+LLG C  
Sbjct: 40  LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 208 TEVPLLVYEFILNG 221
                +V E++  G
Sbjct: 100 EPPFYIVTEYMPYG 113

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSVHESNVE-QFINEVV 188
           E    N  + R +G G  G V++G    M  D     VAVK    V+    E  F+ E +
Sbjct: 41  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           I+S+ NH+N+V+ +G  L++    ++ E +  G
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 133

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 117 LSSNEGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI-- 166
           + S EGN    I+ T+L  ++  E   +N +  + +G G  G V +    G+  +  +  
Sbjct: 4   IESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK 63
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
           VAVK  KS  H    E  ++E+ I+S +  H N+V LLG C      L++ E+
Sbjct: 64  VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 116

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 117 LSSNEGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI-- 166
           + S EGN    I+ T+L  ++  E   +N +  + +G G  G V +    G+  +  +  
Sbjct: 11  IESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK 70
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
           VAVK  KS  H    E  ++E+ I+S +  H N+V LLG C      L++ E+
Sbjct: 71  VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 123

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 117 LSSNEGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI-- 166
           + S EGN    I+ T+L  ++  E   +N +  + +G G  G V +    G+  +  +  
Sbjct: 19  IESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK 78
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
           VAVK  KS  H    E  ++E+ I+S +  H N+V LLG C      L++ E+
Sbjct: 79  VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 117 LSSNEGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI-- 166
           + S EGN    I+ T+L  ++  E   +N +  + +G G  G V +    G+  +  +  
Sbjct: 19  IESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK 78
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
           VAVK  KS  H    E  ++E+ I+S +  H N+V LLG C      L++ E+
Sbjct: 79  VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTV--FKGMLTDGRIVAVK--KSKSVHESNVEQFINE 186
           TS D +    NY++ + IG+G    V   + +LT G+ VAVK      ++ S++++   E
Sbjct: 5   TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 187 VVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
           V I+  +NH N+VKL    +ETE  L LV E+   G
Sbjct: 64  VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGG 98

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTV--FKGMLTDGRIVAVK--KSKSVHESNVEQFINE 186
           TS D +    NY++ + IG+G    V   + +LT G+ VAVK      ++ S++++   E
Sbjct: 5   TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 187 VVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
           V I+  +NH N+VKL    +ETE  L LV E+   G
Sbjct: 64  VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGG 98

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTV--FKGMLTDGRIVAVK--KSKSVHESNVEQFINE 186
           TS D +    NY++ + IG+G    V   + +LT G+ VAVK      ++ S++++   E
Sbjct: 5   TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 187 VVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
           V I+  +NH N+VKL    +ETE  L LV E+   G
Sbjct: 64  VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGG 98

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 117 LSSNEGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI-- 166
           + S EGN    I+ T+L  ++  E   +N +  + +G G  G V +    G+  +  +  
Sbjct: 19  IESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK 78
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
           VAVK  KS  H    E  ++E+ I+S +  H N+V LLG C      L++ E+
Sbjct: 79  VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 117 LSSNEGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI-- 166
           + S EGN    I+ T+L  ++  E   +N +  + +G G  G V +    G+  +  +  
Sbjct: 19  IESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK 78
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
           VAVK  KS  H    E  ++E+ I+S +  H N+V LLG C      L++ E+
Sbjct: 79  VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVHESNV-EQFINEVV 188
           D E   +  ++ R IG+G  G V +G+          VA+K  K+    +V E+F+ E +
Sbjct: 1   DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 189 ILSQINHRNVVKLLGCCLETEV 210
            + Q +H ++VKL+G   E  V
Sbjct: 61  TMRQFDHPHIVKLIGVITENPV 82

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	221
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-34
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-33
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-31
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-19
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-17
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-17
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-17
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-17
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-16
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-16
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-16
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-16
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	8e-16
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-15
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-15
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-15
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-15
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	6e-15
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	7e-15
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	9e-15
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-14
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-14
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-14
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-14
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-14
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-14
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-14
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	7e-14
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	8e-14
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	8e-14
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	8e-14
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-13
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-13
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-13
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-13
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-13
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-13
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-13
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-13
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	5e-13
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-13
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-13
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	5e-13
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	7e-13
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	8e-13
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	9e-13
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-12
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-12
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-12
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-12
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-12
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-12
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-12
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-12
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-12
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	6e-12
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-12
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-11
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-11
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-11
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-11
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-11
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-11
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-11
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-11
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-11
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-11
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-11
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-11
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-11
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	7e-11
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	7e-11
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	8e-11
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	9e-11
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-10
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-10
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	1e-10
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	3e-10
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-10
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-10
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	2e-10
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	3e-09
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-10
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-10
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-10
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-10
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-10
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-10
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-10
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-10
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	5e-10
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-10
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	6e-10
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-09
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-09
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-09
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-09
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	1e-09
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	2e-08
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	1e-06
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	7e-05
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-09
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-09
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-09
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-09
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-09
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-09
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-09
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	3e-09
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	8e-08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-09
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-09
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-09
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-09
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	4e-09
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-09
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	4e-09
3uqc_A	286	Probable conserved transmembrane protein; structur	5e-09
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	6e-09
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	6e-09
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	6e-09
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	7e-09
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-09
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	7e-09
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	8e-09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	8e-09
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-08
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	1e-08
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	3e-06
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-08
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-08
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-08
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-08
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-08
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-08
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	1e-08
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	5e-07
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-08
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-08
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-08
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-08
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-08
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-08
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-08
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-08
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-08
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-08
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-08
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-08
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-08
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	6e-08
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	7e-08
2bou_A	143	EGF-like module containing mucin-like hormone rece	1e-07
2bou_A	143	EGF-like module containing mucin-like hormone rece	2e-07
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-07
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-07
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-07
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-07
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	3e-07
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	2e-05
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	2e-04
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-07
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	4e-07
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-07
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	7e-07
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	8e-07
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	3e-06
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-06
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-06
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-06
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-06
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-06
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	4e-06
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	4e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	6e-06
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	7e-06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	8e-06
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	9e-06
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-05
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-05
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-05
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-05
3v65_B	386	Low-density lipoprotein receptor-related protein;	2e-05
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-05
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-05
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-05
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	5e-05
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-05
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	7e-05
1aut_L	114	Activated protein C; serine proteinase, plasma cal	7e-05
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	8e-05
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	8e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	9e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	9e-05
1nzi_A	159	Complement C1S component; calcium, innate immunity	1e-04
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-04
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	1e-04
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	3e-04
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	4e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-04
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-04
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	1e-04
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	1e-04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-04
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	2e-04
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-04
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-04
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	3e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	4e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	4e-04
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-04
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	5e-04
2vh0_B	134	Activated factor XA light chain; serine protease,	6e-04
2vh0_B	134	Activated factor XA light chain; serine protease,	7e-04
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	6e-04
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	6e-04
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	7e-04
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	7e-04
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	7e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	8e-04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	8e-04
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	8e-04
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	8e-04
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	9e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  123 bits (310), Expect = 4e-34
 Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 1/102 (0%)

Query: 121 EGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNV 180
           E ++ + K F+ ++L+ A+DN+    I+G+GG G V+KG L DG +VAVK+ K       
Sbjct: 11  EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGG 70

Query: 181 E-QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           E QF  EV ++S   HRN+++L G C+     LLVY ++ NG
Sbjct: 71  ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 112

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  120 bits (304), Expect = 3e-33
 Identities = 37/109 (33%), Positives = 60/109 (55%)

Query: 113 LRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKS 172
           +   LSS+     ++      DLE+AT+N+    +IG G  G V+KG+L DG  VA+K+ 
Sbjct: 12  INDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRR 71

Query: 173 KSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
                  +E+F  E+  LS   H ++V L+G C E    +L+Y+++ NG
Sbjct: 72  TPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG 120

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  116 bits (292), Expect = 1e-31
 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 11/116 (9%)

Query: 116 ELSSNEGNIEKTKLFTSKDLEKATDN------YKVSRIIGQGGQGTVFKGMLTDGRIVAV 169
           E  S E +  +   F+  +L+  T+N            +G+GG G V+KG + +   VAV
Sbjct: 1   ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAV 59

Query: 170 KKSKSVHESNVEQ----FINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           KK  ++ +   E+    F  E+ ++++  H N+V+LLG   + +   LVY ++ NG
Sbjct: 60  KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 83.2 bits (206), Expect = 3e-19
 Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 6/96 (6%)

Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVI 189
             +++L   +   ++  +  +G  G V+K  L     VAVK      + +  Q   EV  
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQS-WQNEYEVYS 71

Query: 190 LSQINHRNVVKLLGCCLETEVP----LLVYEFILNG 221
           L  + H N+++ +G             L+  F   G
Sbjct: 72  LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKG 107

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 78.7 bits (194), Expect = 1e-17
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 11/99 (11%)

Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVI 189
             + +     DN K+  +IG+G  G V+KG L D R VAVK     +    + FINE  I
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNI 58

Query: 190 --LSQINHRNVVKLLGCCLETEVP-----LLVYEFILNG 221
             +  + H N+ + +              LLV E+  NG
Sbjct: 59  YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNG 97

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 78.1 bits (193), Expect = 2e-17
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINHRNVVK 200
            +   IG G  GTV +     G  VAVK    +  H   V +F+ EV I+ ++ H N+V 
Sbjct: 40  NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98

Query: 201 LLGCCLETEVPLLVYEFILNG 221
            +G   +     +V E++  G
Sbjct: 99  FMGAVTQPPNLSIVTEYLSRG 119

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 77.3 bits (191), Expect = 2e-17
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESN----VEQFINEVVILSQINHRNV 198
            +  IIG GG G V++     G  VAVK ++   + +    +E    E  + + + H N+
Sbjct: 10  TLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI 68

Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
           + L G CL+     LV EF   G
Sbjct: 69  IALRGVCLKEPNLCLVMEFARGG 91

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 77.4 bits (191), Expect = 3e-17
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 10/87 (11%)

Query: 143 KVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-------SKSVHESNVEQFINEVVILSQIN 194
           +  + IG+GG G V KG  + D  +VA+K         ++      ++F  EV I+S +N
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81

Query: 195 HRNVVKLLGCCLETEVPLLVYEFILNG 221
           H N+VKL G       P +V EF+  G
Sbjct: 82  HPNIVKLYGLM--HNPPRMVMEFVPCG 106

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 76.2 bits (188), Expect = 1e-16
 Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 7/80 (8%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLL 202
           +V  ++G+G  G V K      + VA+K+ +S  ES  + FI E+  LS++NH N+VKL 
Sbjct: 11  EVEEVVGRGAFGVVCKAKW-RAKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLY 67

Query: 203 GCCLETEVPL-LVYEFILNG 221
           G CL    P+ LV E+   G
Sbjct: 68  GACLN---PVCLVMEYAEGG 84

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 75.8 bits (187), Expect = 2e-16
 Identities = 25/109 (22%), Positives = 54/109 (49%), Gaps = 19/109 (17%)

Query: 132 SKDLEKATDNYKVSR-------IIGQGGQGTVFKGMLTDG----RIVAVK--KSKSVHES 178
           S +L++  ++  +         ++G+G  G+V +  L         VAVK  K+  +  S
Sbjct: 8   SDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASS 67

Query: 179 NVEQFINEVVILSQINHRNVVKLLGCCLETE------VPLLVYEFILNG 221
           ++E+F+ E   + + +H +V KL+G  L +       +P+++  F+ +G
Sbjct: 68  DIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHG 116

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 75.0 bits (185), Expect = 3e-16
 Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 15/128 (11%)

Query: 109 GGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYK---------VSRIIGQGGQGTVFKG 159
           G +     LS  EG     +    ++ +  +D            +   +G+G  G VF  
Sbjct: 1   GAMGSGSSLSPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLA 60

Query: 160 MLTDGR------IVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL 213
              +        +VAVK  K   ES  + F  E  +L+ + H+++V+  G C E    L+
Sbjct: 61  ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120

Query: 214 VYEFILNG 221
           V+E++ +G
Sbjct: 121 VFEYMRHG 128

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 74.6 bits (184), Expect = 3e-16
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 18/109 (16%)

Query: 131 TSKDLEKATDNYKVSR-------IIGQGGQGTVFKGMLTDGR----IVAVK--KSKSVHE 177
            S++L+   ++  + R       I+G+G  G+V +G L         VAVK  K  +  +
Sbjct: 18  GSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQ 77

Query: 178 SNVEQFINEVVILSQINHRNVVKLLGCCLETE-----VPLLVYEFILNG 221
             +E+F++E   +   +H NV++LLG C+E        P+++  F+  G
Sbjct: 78  REIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYG 126

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 73.0 bits (180), Expect = 8e-16
 Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 5/83 (6%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINHRNVVK 200
                + +   G ++KG    G  + VK  K +         F  E   L   +H NV+ 
Sbjct: 13  NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71

Query: 201 LLGCCLETEVPLL--VYEFILNG 221
           +LG C     P    +  ++  G
Sbjct: 72  VLGACQSPPAPHPTLITHWMPYG 94

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 73.3 bits (180), Expect = 2e-15
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVH-ESNVEQFINEVVILSQINHRN 197
             + +IG+G  G V+ G L D        AVK    +     V QF+ E +I+   +H N
Sbjct: 92  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151

Query: 198 VVKLLGCCLETEVPLL-VYEFILNG 221
           V+ LLG CL +E   L V  ++ +G
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHG 176

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVH-ESNVEQFINEVVILSQINHRN 197
             + +IG+G  G V+ G L D        AVK    +     V QF+ E +I+   +H N
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87

Query: 198 VVKLLGCCLETEVPLL-VYEFILNG 221
           V+ LLG CL +E   L V  ++ +G
Sbjct: 88  VLSLLGICLRSEGSPLVVLPYMKHG 112

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 71.9 bits (177), Expect = 3e-15
 Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 7/111 (6%)

Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR------IVAVKK 171
           S N        ++   + E A +   +SR +GQG  G V++G+            VA+K 
Sbjct: 3   SVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 62

Query: 172 SKSVH-ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
                      +F+NE  ++ + N  +VV+LLG   + +  L++ E +  G
Sbjct: 63  VNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 113

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 72.0 bits (177), Expect = 3e-15
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 143 KVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKL 201
               ++G+G  G   K      G ++ +K+     E     F+ EV ++  + H NV+K 
Sbjct: 13  IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF 72

Query: 202 LGCCLETEVPLLVYEFILNG 221
           +G   + +    + E+I  G
Sbjct: 73  IGVLYKDKRLNFITEYIKGG 92

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 71.2 bits (175), Expect = 6e-15
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGR------IVAVKKSKSVH-ESNVEQFINEVVILSQ 192
            N  + R +G G  G V++G ++          VAVK    V  E +   F+ E +I+S+
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89

Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
            NH+N+V+ +G  L++    ++ E +  G
Sbjct: 90  FNHQNIVRCIGVSLQSLPRFILMELMAGG 118

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 71.1 bits (175), Expect = 7e-15
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 7/89 (7%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGR------IVAVKKSKSVH-ESNVEQFINEVVILSQ 192
            N  + + +G+G  G V K      +       VAVK  K     S +   ++E  +L Q
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82

Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
           +NH +V+KL G C +    LL+ E+   G
Sbjct: 83  VNHPHVIKLYGACSQDGPLLLIVEYAKYG 111

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 70.9 bits (174), Expect = 9e-15
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGR------IVAVKKSKSVH-ESNVEQFINEVVILSQ 192
            N  + R +G G  G V++G ++          VAVK    V  E +   F+ E +I+S+
Sbjct: 71  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130

Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
            NH+N+V+ +G  L++    ++ E +  G
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGG 159

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 70.3 bits (173), Expect = 1e-14
 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 6/88 (6%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGR------IVAVKKSKSVHESNVEQFINEVVILSQI 193
            +  + R +G+G  G VF     +        +VAVK  K    +  + F  E  +L+ +
Sbjct: 15  RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74

Query: 194 NHRNVVKLLGCCLETEVPLLVYEFILNG 221
            H ++VK  G C + +  ++V+E++ +G
Sbjct: 75  QHEHIVKFYGVCGDGDPLIMVFEYMKHG 102

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 70.8 bits (174), Expect = 1e-14
 Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 6/122 (4%)

Query: 103 KFFKRNGGLLLRQ--ELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM 160
           + +  +   L  +  +    EG +     F            K+ + IG+G  G V  G 
Sbjct: 154 EHYTTDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGD 213

Query: 161 LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL-LVYEFIL 219
              G  VAVK  K+  ++  + F+ E  +++Q+ H N+V+LLG  +E +  L +V E++ 
Sbjct: 214 YR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 270

Query: 220 NG 221
            G
Sbjct: 271 KG 272

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 69.6 bits (171), Expect = 2e-14
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVH-ESNVEQFINEVVILSQINHRN 197
              R+IG+G  G V+ G   D        A+K    +     VE F+ E +++  +NH N
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83

Query: 198 VVKLLGCCLETE-VPLLVYEFILNG 221
           V+ L+G  L  E +P ++  ++ +G
Sbjct: 84  VLALIGIMLPPEGLPHVLLPYMCHG 108

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 70.0 bits (172), Expect = 2e-14
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGR------IVAVKKSKSVH-ESNVEQFINEVVILSQ 192
           +N +  R IG+G  G VF+             +VAVK  K          F  E  ++++
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106

Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
            ++ N+VKLLG C   +   L++E++  G
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYG 135

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 69.6 bits (171), Expect = 2e-14
 Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 17/142 (11%)

Query: 88  WYKFIKRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRI 147
            YK+ ++ +   R +         ++     ++   I+ T+L  ++  E   +N +  + 
Sbjct: 3   DYKYKQKPKYQVRWK---------IIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKT 53

Query: 148 IGQGGQGTVFKGMLTDGR------IVAVKKSK-SVHESNVEQFINEVVILSQI-NHRNVV 199
           +G G  G V +              VAVK  K + H    E  ++E+ I+S +  H N+V
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
            LLG C      L++ E+   G
Sbjct: 114 NLLGACTHGGPVLVITEYCCYG 135

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 69.3 bits (170), Expect = 3e-14
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINHRNVVK 200
           ++  +IG+G  G V+ G    G  VA++    +  +E  ++ F  EV+   Q  H NVV 
Sbjct: 36  EIGELIGKGRFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVL 93

Query: 201 LLGCCLETEVPLLVYEFILNG 221
            +G C+      ++       
Sbjct: 94  FMGACMSPPHLAIITSLCKGR 114

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 68.8 bits (169), Expect = 3e-14
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 4/102 (3%)

Query: 121 EGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNV 180
            G++     F            K+ + IG+G  G V  G    G  VAVK  K+  ++  
Sbjct: 2   GGSVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKN--DATA 58

Query: 181 EQFINEVVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
           + F+ E  +++Q+ H N+V+LLG  +E +  L +V E++  G
Sbjct: 59  QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 100

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 68.1 bits (167), Expect = 7e-14
 Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 8/90 (8%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRI--------VAVKKSKSVHESNVEQFINEVVILS 191
           ++   +  +GQG    +FKG+  +           V +K     H +  E F     ++S
Sbjct: 8   EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67

Query: 192 QINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           +++H+++V   G C+  +  +LV EF+  G
Sbjct: 68  KLSHKHLVLNYGVCVCGDENILVQEFVKFG 97

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 68.6 bits (168), Expect = 8e-14
 Identities = 28/123 (22%), Positives = 45/123 (36%), Gaps = 5/123 (4%)

Query: 103 KFFKRNGGLL---LRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKG 159
                    L   L                      E    +  +   +G G  G V++G
Sbjct: 180 HHHSTVADGLITTLHYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEG 239

Query: 160 MLTDGRI-VAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI 218
           +     + VAVK  K      VE+F+ E  ++ +I H N+V+LLG C       ++ EF+
Sbjct: 240 VWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298

Query: 219 LNG 221
             G
Sbjct: 299 TYG 301

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 67.6 bits (166), Expect = 8e-14
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLL 202
            + + +G G  G V  G       VAVK  K     + ++F  E   + +++H  +VK  
Sbjct: 11  TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKE-GSMSEDEFFQEAQTMMKLSHPKLVKFY 69

Query: 203 GCCLETEVPLLVYEFILNG 221
           G C +     +V E+I NG
Sbjct: 70  GVCSKEYPIYIVTEYISNG 88

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDG---RIVAVKKSKSVH-ESNVEQFINEVVILSQI-N 194
           ++ K   +IG+G  G V K  +         A+K+ K    + +   F  E+ +L ++ +
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84

Query: 195 HRNVVKLLGCCLETEVPLLVYEFILNG 221
           H N++ LLG C       L  E+  +G
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHG 111

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 67.0 bits (164), Expect = 2e-13
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 143 KVSRIIGQGGQGTVFKGMLT-----DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
           K  + +G+G  G+V            G +VAVKK +   E ++  F  E+ IL  + H N
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103

Query: 198 VVKLLGCCLET-EVPL-LVYEFILNG 221
           +VK  G C       L L+ E++  G
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYG 129

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 66.5 bits (163), Expect = 2e-13
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLL 202
              + +G G  G V  G       VA+K  K     + ++FI E  ++  ++H  +V+L 
Sbjct: 27  TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLY 85

Query: 203 GCCLETEVPLLVYEFILNG 221
           G C +     ++ E++ NG
Sbjct: 86  GVCTKQRPIFIITEYMANG 104

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 67.4 bits (165), Expect = 2e-13
 Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 19/160 (11%)

Query: 81  LPIGLWRWYKFIKRRRKIKRK-QKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKAT 139
            P  + +  K I  RR++    +     N    L +  +      +   L    + E   
Sbjct: 13  DPPAVHKLTKRIPLRRQVTVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGVSEYELPE 72

Query: 140 D--------NYKVSRIIGQGGQGTVFKGMLTDGR--------IVAVKKSKSVH-ESNVEQ 182
           D           + + +G+G  G V                  VAVK  K    E ++  
Sbjct: 73  DPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD 132

Query: 183 FINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
            ++E+ ++  I  H+N++ LLG C +     ++ E+   G
Sbjct: 133 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 172

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 66.6 bits (163), Expect = 2e-13
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 7/82 (8%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINHRNVVK 200
            V + IG G  GTV+KG       VAVK     +     ++ F NEV +L +  H N++ 
Sbjct: 27  TVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84

Query: 201 LLGCCLETEVPL-LVYEFILNG 221
            +G    T   L +V ++    
Sbjct: 85  FMGYS--TAPQLAIVTQWCEGS 104

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 66.2 bits (162), Expect = 3e-13
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 143 KVSRIIGQGGQGTVFKGMLT-----DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
           K  + +G+G  G+V            G +VAVKK +   E ++  F  E+ IL  + H N
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72

Query: 198 VVKLLGCCLET-EVPL-LVYEFILNG 221
           +VK  G C       L L+ E++  G
Sbjct: 73  IVKYKGVCYSAGRRNLKLIMEYLPYG 98

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 66.2 bits (162), Expect = 4e-13
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 7/86 (8%)

Query: 143 KVSRIIGQGGQGTVFKGMLT-----DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
           K    +G+G  G+V            G +VAVK+ +         F  E+ IL  ++   
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85

Query: 198 VVKLLGCCLET-EVPL-LVYEFILNG 221
           +VK  G         L LV E++ +G
Sbjct: 86  IVKYRGVSYGPGRQSLRLVMEYLPSG 111

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 66.1 bits (162), Expect = 4e-13
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 9/91 (9%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD------GRIVAVKKSKSVH-ESNVEQFINEVVILSQ 192
           D  K+ + +G+G  G V +            R VAVK  K     S     ++E+ IL  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86

Query: 193 I-NHRNVVKLLGCCLETEVPL-LVYEFILNG 221
           I +H NVV LLG C +   PL ++ EF   G
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 66.2 bits (162), Expect = 4e-13
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 97  KIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTV 156
           K K++ ++  +   + +     +    ++  +       E   +N +  +++G G  G V
Sbjct: 2   KYKKQFRYESQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKV 61

Query: 157 FKGMLTDGR------IVAVKKSK-SVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLET 208
                           VAVK  K     S  E  ++E+ +++Q+ +H N+V LLG C  +
Sbjct: 62  MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121

Query: 209 EVPLLVYEFILNG 221
               L++E+   G
Sbjct: 122 GPIYLIFEYCCYG 134

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 65.3 bits (160), Expect = 5e-13
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRI-VAVKKSKSVHESNVEQFINEVVILSQINHRNVVKL 201
            +   +G G  G V++G+     + VAVK  K      VE+F+ E  ++ +I H N+V+L
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQL 74

Query: 202 LGCCLETEVPLLVYEFILNG 221
           LG C       ++ EF+  G
Sbjct: 75  LGVCTREPPFYIITEFMTYG 94

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 65.3 bits (160), Expect = 5e-13
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLL 202
           K+   +G G  G V+ G       VAVK  K     + + F+ E  ++ Q+ H+ +V+L 
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLY 74

Query: 203 GCCLETEVPLL-VYEFILNG 221
                T+ P+  + E++ NG
Sbjct: 75  AVV--TQEPIYIITEYMENG 92

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 65.4 bits (160), Expect = 5e-13
 Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 5/105 (4%)

Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVH 176
           S+ EG+ E   L    +     D      ++G+G  G V+ G  L++   +A+K+     
Sbjct: 4   STEEGDCESDLLEYDYEY----DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD 59

Query: 177 ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
               +    E+ +   + H+N+V+ LG   E     +  E +  G
Sbjct: 60  SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGG 104

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 65.3 bits (160), Expect = 5e-13
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGR------IVAVKKSKSVH-ESNVEQFINEVVILSQ 192
              +    +G+   G V+KG L           VA+K  K        E+F +E ++ ++
Sbjct: 9   SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR 68

Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
           + H NVV LLG   + +   +++ +  +G
Sbjct: 69  LQHPNVVCLLGVVTKDQPLSMIFSYCSHG 97

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 64.9 bits (159), Expect = 7e-13
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLL 202
              + IG G  G V  G   +   VA+K  +     + E FI E  ++ +++H  +V+L 
Sbjct: 11  TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLY 69

Query: 203 GCCLETEVPLLVYEFILNG 221
           G CLE     LV EF+ +G
Sbjct: 70  GVCLEQAPICLVTEFMEHG 88

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 65.4 bits (160), Expect = 8e-13
 Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 10/92 (10%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGR--------IVAVKKSKSVH-ESNVEQFINEVVIL 190
           D   + + +G+G  G V                  VAVK  K    E ++   ++E+ ++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 191 SQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
             I  H+N++ LLG C +     ++ E+   G
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 65.1 bits (159), Expect = 9e-13
 Identities = 25/111 (22%), Positives = 38/111 (34%), Gaps = 7/111 (6%)

Query: 113 LRQELSSNEGNIEKTKLF-TSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK 170
           L  E   NEG +   KL     +  +          +G+G  G V +      G   AVK
Sbjct: 30  LGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVK 89

Query: 171 KSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           K   V          E+V  + ++   +V L G   E     +  E +  G
Sbjct: 90  K---VRLEVFRV--EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 135

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 65.2 bits (159), Expect = 1e-12
 Identities = 24/120 (20%), Positives = 53/120 (44%), Gaps = 4/120 (3%)

Query: 103 KFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLT 162
            ++ ++   L  +  +    +  +T+       E   ++ ++   +GQG  G V+ G   
Sbjct: 147 AYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN 206

Query: 163 DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
               VA+K  K     + E F+ E  ++ ++ H  +V+L      +E P+ +V E++  G
Sbjct: 207 GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVTEYMSKG 263

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 65.3 bits (159), Expect = 1e-12
 Identities = 25/120 (20%), Positives = 53/120 (44%), Gaps = 4/120 (3%)

Query: 103 KFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLT 162
            ++ ++   L  +  +    +  +T+       E   ++ ++   +GQG  G V+ G   
Sbjct: 230 AYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN 289

Query: 163 DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
               VA+K  K    S  E F+ E  ++ ++ H  +V+L      +E P+ +V E++  G
Sbjct: 290 GTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVTEYMSKG 346

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 64.3 bits (157), Expect = 2e-12
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 8/87 (9%)

Query: 143 KVSRIIGQGGQGTVFKGMLTD-----GRIVAVKKSKSVH-ESNVEQFINEVVILSQINHR 196
           K  R +G+G  G V            G +VAVK  K+     +   +  E+ IL  + H 
Sbjct: 34  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93

Query: 197 NVVKLLGCCLETEVP--LLVYEFILNG 221
           +++K  GCC +       LV E++  G
Sbjct: 94  HIIKYKGCCEDAGAASLQLVMEYVPLG 120

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKS-VHESNVEQFINEVVILSQINHRN 197
            + +IIG G  G V  G L         VA+K  K+   E     F++E  I+ Q +H N
Sbjct: 52  HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN 111

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +++L G      + ++V E++ NG
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENG 135

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 63.5 bits (155), Expect = 3e-12
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRI-----VAVK--KSKSVHESNVEQFINEVVILSQ 192
                 ++IG G  G V+KGML          VA+K  K+    +  V+ F+ E  I+ Q
Sbjct: 44  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQ 102

Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
            +H N+++L G   + +  +++ E++ NG
Sbjct: 103 FSHHNIIRLEGVISKYKPMMIITEYMENG 131

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 63.4 bits (155), Expect = 3e-12
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 8/90 (8%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGR------IVAVKKSK-SVHESNVEQFINEVVILSQ 192
           +     + +G G  G V +              VAVK  K S H +  E  ++E+ +LS 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 193 I-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
           + NH N+V LLG C      L++ E+   G
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYG 112

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 63.5 bits (155), Expect = 4e-12
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 10/92 (10%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD--------GRIVAVKKSKSVH-ESNVEQFINEVVIL 190
           D   + + +G+G  G V                  VAVK  KS   E ++   I+E+ ++
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128

Query: 191 SQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
             I  H+N++ LLG C +     ++ E+   G
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKG 160

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 63.5 bits (155), Expect = 4e-12
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 5/87 (5%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKS-VHESNVEQFINEVVILSQIN 194
            N  + +++G G  G V  G L         VA+K  K    E     F+ E  I+ Q +
Sbjct: 45  TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104

Query: 195 HRNVVKLLGCCLETEVPLLVYEFILNG 221
           H N+++L G   +++  ++V E++ NG
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENG 131

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 63.1 bits (154), Expect = 4e-12
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
            + +++   +G G  G V+K      G + A K  ++  E  +E +I E+ IL+  +H  
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77

Query: 198 VVKLLGCCLETEVPLLVYEF 217
           +VKLLG         ++ EF
Sbjct: 78  IVKLLGAYYHDGKLWIMIEF 97

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 63.0 bits (154), Expect = 5e-12
 Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 7/85 (8%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGR-----IVAVKKSKSVH-ESNVEQFINEVVILSQINHR 196
           K  +++G G  GTV+KG+           VA+K+ +        ++ ++E  +++ +++ 
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNP 77

Query: 197 NVVKLLGCCLETEVPLLVYEFILNG 221
           +V +LLG CL + V  L+ + +  G
Sbjct: 78  HVCRLLGICLTSTV-QLITQLMPFG 101

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 62.7 bits (153), Expect = 5e-12
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK---SKSVHESNVEQFINEVVILSQINH 195
            N+++ + IG+G    V++   L DG  VA+KK      +        I E+ +L Q+NH
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 196 RNVVKLLGCCLETEVPLLVYEFILNG 221
            NV+K     +E     +V E    G
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAG 117

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 62.7 bits (153), Expect = 5e-12
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 8/87 (9%)

Query: 143 KVSRIIGQGGQGTVFKGMLT-----DGRIVAVKKSKSVH-ESNVEQFINEVVILSQINHR 196
           K  R +G+G  G V            G  VAVK  K     +++     E+ IL  + H 
Sbjct: 24  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83

Query: 197 NVVKLLGCCLETEVP--LLVYEFILNG 221
           N+VK  G C E       L+ EF+ +G
Sbjct: 84  NIVKYKGICTEDGGNGIKLIMEFLPSG 110

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 63.2 bits (154), Expect = 6e-12
 Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 8/135 (5%)

Query: 91  FIKRRRK---IKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRI 147
           +I  R     ++     +K+    L ++ LS    + +  K +     E   ++ K+ + 
Sbjct: 137 YISPRSTFSTLQELVDHYKKGNDGLCQK-LSVPCMSSKPQKPWEKDAWEIPRESLKLEKK 195

Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
           +G G  G V+         VAVK  K     +VE F+ E  ++  + H  +VKL      
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV-- 252

Query: 208 TEVPL-LVYEFILNG 221
           T+ P+ ++ EF+  G
Sbjct: 253 TKEPIYIITEFMAKG 267

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 62.3 bits (152), Expect = 8e-12
 Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGR-----IVAVKKSKSVH-ESNVEQFINEVVILSQINHR 196
           +  +++G G  GTV KG+           V +K  +      + +   + ++ +  ++H 
Sbjct: 16  RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHA 75

Query: 197 NVVKLLGCCLETEVPLLVYEFILNG 221
           ++V+LLG C       LV +++  G
Sbjct: 76  HIVRLLGLCPG-SSLQLVTQYLPLG 99

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 62.0 bits (151), Expect = 1e-11
 Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGR-----IVAVKKSKSVH-ESNVEQFINEVVILSQINHR 196
           K  +++G G  GTV+KG+           VA+K+ +        ++ ++E  +++ +++ 
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNP 77

Query: 197 NVVKLLGCCLETEVPLLVYEFILNG 221
           +V +LLG CL      L+ + +  G
Sbjct: 78  HVCRLLGICLT-STVQLITQLMPFG 101

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 62.4 bits (152), Expect = 1e-11
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 128 KLFTSKDLEKATDNYKVSRIIGQGGQGTVFKG-MLTDGRIVAVK---KSKSVHESNVEQF 183
            +F        +D YK  R++G+G  G V        G+  AVK   K +   +++ E  
Sbjct: 14  GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73

Query: 184 INEVVILSQINHRNVVKLLG 203
           + EV +L Q++H N++KL  
Sbjct: 74  LREVQLLKQLDHPNIMKLYE 93

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 61.2 bits (149), Expect = 1e-11
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINHRNV 198
            K    IG+G   TV+KG+       VA    + + + +S  ++F  E  +L  + H N+
Sbjct: 28  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 87

Query: 199 VKLLGCCLETE 209
           V+       T 
Sbjct: 88  VRFYDSWESTV 98

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 6/84 (7%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRI----VAVKKSK-SVHESNVEQFINEVVILSQINHRN 197
            ++RI+G+G  G V++G+ T+ +     VAVK  K      N E+F++E VI+  ++H +
Sbjct: 15  VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPH 74

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +VKL+G   E E   ++ E    G
Sbjct: 75  IVKLIGIIEE-EPTWIIMELYPYG 97

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRI-VAVKKSK-SVHESNVEQFINEVVILSQINHRN 197
           ++  +   IG+G  G VF G L      VAVK  + ++      +F+ E  IL Q +H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +V+L+G C + +   +V E +  G
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGG 197

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSK-SVHESNVEQFINEVVILSQINHRN 197
           ++ R IG+G  G V +G+          VA+K  K    +S  E+F+ E + + Q +H +
Sbjct: 18  ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 77

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +VKL+G   E     ++ E    G
Sbjct: 78  IVKLIGVITE-NPVWIIMELCTLG 100

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 144 VSRIIGQGGQGTVFKGMLTDGRI---VAVK--KSKSVHESNVEQFINEVVILSQINHRNV 198
             + +G G  GTV KG     ++   VAVK  K+++   +  ++ + E  ++ Q+++  +
Sbjct: 21  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80

Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
           V+++G C   E  +LV E    G
Sbjct: 81  VRMIGICEA-ESWMLVMEMAELG 102

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEVVILSQINHR 196
             +++   ++GQG  G V K     D R  A+KK   +  E  +   ++EV++L+ +NH+
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQ 62

Query: 197 NVVKLLGCCLETE 209
            VV+     LE  
Sbjct: 63  YVVRYYAAWLERR 75

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 60.8 bits (148), Expect = 2e-11
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
              Y     IGQG  GTV+  M +  G+ VA+++     +   E  INE++++ +  + N
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 198 VVKLLGCCL 206
           +V  L   L
Sbjct: 79  IVNYLDSYL 87

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 61.0 bits (148), Expect = 3e-11
 Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 7/111 (6%)

Query: 114 RQELSSNEGNIEKTKLFTSKDLEKATDN---YKVSRIIGQGGQGTVFKGMLTDGRIVAVK 170
           RQ + S +   +     +S   E  +     Y + + IG GG   VF+ +    +I A+K
Sbjct: 27  RQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIK 86

Query: 171 --KSKSVHESNVEQFINEVVILSQINH--RNVVKLLGCCLETEVPLLVYEF 217
               +      ++ + NE+  L+++      +++L    +  +   +V E 
Sbjct: 87  YVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC 137

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 60.8 bits (148), Expect = 3e-11
 Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 1/80 (1%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
                    IG+G  G V        GR VAVK      +   E   NEVVI+    H N
Sbjct: 44  RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103

Query: 198 VVKLLGCCLETEVPLLVYEF 217
           VV++    L  E   ++ EF
Sbjct: 104 VVEMYKSYLVGEELWVLMEF 123

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 60.8 bits (148), Expect = 3e-11
 Identities = 16/81 (19%), Positives = 37/81 (45%), Gaps = 4/81 (4%)

Query: 141 NYKVSRIIGQGGQGTVFKGMLTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINHRN- 197
            Y + + IG GG   VF+ +    +I A+K    +      ++ + NE+  L+++   + 
Sbjct: 29  IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88

Query: 198 -VVKLLGCCLETEVPLLVYEF 217
            +++L    +  +   +V E 
Sbjct: 89  KIIRLYDYEITDQYIYMVMEC 109

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 60.5 bits (147), Expect = 3e-11
 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 7/104 (6%)

Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK---SK 173
           + +  + +  +LF   D E     +   R IG G  G V+    + +  +VA+KK   S 
Sbjct: 35  AGSLKDPDVAELFFKDDPE---KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG 91

Query: 174 SVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF 217
                  +  I EV  L ++ H N ++  GC L      LV E+
Sbjct: 92  KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 60.1 bits (146), Expect = 4e-11
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEVVILSQINHRN 197
            +++  + +G+GG G VF+     D    A+K+      E   E+ + EV  L+++ H  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 198 VVKLLGCCLE 207
           +V+     LE
Sbjct: 65  IVRYFNAWLE 74

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 59.3 bits (144), Expect = 7e-11
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSK--SVHESNVEQFINEVVILSQI-N 194
           T  +     IG G  G+VFK +   DG I A+K+SK       + +  + EV   + +  
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 195 HRNVVKLLGCCLE 207
           H +VV+      E
Sbjct: 70  HSHVVRYFSAWAE 82

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 60.3 bits (146), Expect = 7e-11
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVH-ESNVEQFIN 185
           +++D E   +  ++ R IG+G  G V +G+          VA+K  K+   +S  E+F+ 
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440

Query: 186 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           E + + Q +H ++VKL+G   E  V  ++ E    G
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLG 475

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 59.4 bits (144), Expect = 8e-11
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEVVILSQINHRN 197
             + +S I+GQG    VF+G     G + A+K  +       V+  + E  +L ++NH+N
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 198 VVKLLGC--CLETEVPLLVYEFILNG 221
           +VKL        T   +L+ EF   G
Sbjct: 69  IVKLFAIEEETTTRHKVLIMEFCPCG 94

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 59.3 bits (144), Expect = 9e-11
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 3/85 (3%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK--SKSVHESNVEQFINEVVILSQINHR 196
           + Y   + IG+G  G         DGR   +K+     +     E+   EV +L+ + H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 197 NVVKLLGCCLETEVPLLVYEFILNG 221
           N+V+      E     +V ++   G
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGG 108

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 141 NYKVSRIIGQGGQGTVFKGMLTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINH--R 196
            Y + + IG GG   VF+ +    +I A+K    +      ++ + NE+  L+++     
Sbjct: 10  IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69

Query: 197 NVVKLLGCCLETEVPLLVYEF 217
            +++L    +  +   +V E 
Sbjct: 70  KIIRLYDYEITDQYIYMVMEC 90

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 59.5 bits (144), Expect = 1e-10
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEVVILSQINHRN 197
             + +S I+GQG    VF+G     G + A+K  +       V+  + E  +L ++NH+N
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 198 VVKLLGC--CLETEVPLLVYEFILNG 221
           +VKL        T   +L+ EF   G
Sbjct: 69  IVKLFAIEEETTTRHKVLIMEFCPCG 94

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 54.9 bits (133), Expect = 1e-10
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGK 56
           D+DEC +       G+C NT GSY C+CP G    G 
Sbjct: 3  VDMDECKE-PDVCKHGQCINTDGSYRCECPFGYILAGN 39

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 54.1 bits (131), Expect = 3e-10
 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)

Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGC 59
           D DEC         G CKN IG + C C  G      + C
Sbjct: 42 VDTDECSVGN-PCGNGTCKNVIGGFECTCEEGFEPGPMMTC 81

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
            + + V   +G+G  G+V+K +    G+IVA+K+     ES++++ I E+ I+ Q +  +
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV--ESDLQEIIKEISIMQQCDSPH 85

Query: 198 VVKLLGCCLETEVPLLVYEF 217
           VVK  G   +     +V E+
Sbjct: 86  VVKYYGSYFKNTDLWIVMEY 105

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 5/97 (5%)

Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVV 188
           F    +     +Y   + +G+GG   V     L DG   A+K+     + + E+   E  
Sbjct: 19  FQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREAD 78

Query: 189 ILSQINHRNVVKLLGCCLETEVP----LLVYEFILNG 221
           +    NH N+++L+  CL          L+  F   G
Sbjct: 79  MHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRG 115

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGC 59
          TDIDEC         G+C NT G + C C  G      +  
Sbjct: 1  TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMK 41

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 51.5 bits (124), Expect = 3e-09
 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMY--GDGK 56
           DIDEC         G C NT GSY C+CP G     +  
Sbjct: 44 MDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNIS 83

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 3/81 (3%)

Query: 126 KTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKG-MLTDGRIVAVK--KSKSVHESNVEQ 182
              +F +      ++ Y+  + +G G  G V            A+K  +  SV  S+  +
Sbjct: 23  TPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK 82

Query: 183 FINEVVILSQINHRNVVKLLG 203
            + EV +L  ++H N++KL  
Sbjct: 83  LLEEVAVLKLLDHPNIMKLYD 103

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 58.4 bits (141), Expect = 2e-10
 Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 148 IGQGGQGTVFKGMLT--DGRI-VAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLG 203
           +G G  G+V +G+      +I VA+K  K    +++ E+ + E  I+ Q+++  +V+L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403

Query: 204 CCLETEVPLLVYEFILNG 221
            C    + +LV E    G
Sbjct: 404 VCQAEAL-MLVMEMAGGG 420

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 57.7 bits (140), Expect = 3e-10
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSK-SVHESNVEQFINEVVILSQINHR 196
            + +     IG+G  G VFKG+     ++VA+K       E  +E    E+ +LSQ +  
Sbjct: 21  EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80

Query: 197 NVVKLLGC 204
            V K  G 
Sbjct: 81  YVTKYYGS 88

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 57.7 bits (140), Expect = 3e-10
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVH--ESNVEQFINEVVILSQI-NH 195
            +++    +G G  G VFK     DGR+ AVK+S S      +  + + EV    ++  H
Sbjct: 57  QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116

Query: 196 RNVVKLLGC 204
              V+L   
Sbjct: 117 PCCVRLEQA 125

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 57.7 bits (140), Expect = 3e-10
 Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 3/73 (4%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK--SKSVHESNVEQFINEVVILSQINHR 196
           ++Y+V   IG G  G   K    +DG+I+  K+    S+ E+  +  ++EV +L ++ H 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 197 NVVKLLGCCLETE 209
           N+V+     ++  
Sbjct: 66  NIVRYYDRIIDRT 78

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 58.5 bits (141), Expect = 3e-10
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEVVILSQI 193
            +    +++   +G GG G V + +    G  VA+K+  + +   N E++  E+ I+ ++
Sbjct: 10  TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL 69

Query: 194 NHRNVVKLLGCCLETE-------VPLLVYEFILNG 221
           NH NVV       +         +PLL  E+   G
Sbjct: 70  NHPNVVSAR-EVPDGLQKLAPNDLPLLAMEYCEGG 103

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 57.6 bits (140), Expect = 3e-10
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQF----INEVVILSQINH 195
           + Y+    +G+G  G V+K   + GRIVA+K+ +   E   E      I E+ +L +++H
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAED--EGIPSTAIREISLLKELHH 78

Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+V L+          LV+EF+
Sbjct: 79  PNIVSLIDVIHSERCLTLVFEFM 101

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 57.3 bits (139), Expect = 4e-10
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
            ++K   +IG GG G VFK     DG+   +K+ K  + +  E+   EV  L++++H N+
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK--YNN--EKAEREVKALAKLDHVNI 66

Query: 199 VKLLGCCLETE 209
           V   GC    +
Sbjct: 67  VHYNGCWDGFD 77

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 57.4 bits (139), Expect = 5e-10
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 6/81 (7%)

Query: 126 KTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKG-MLTDGRIVAVK--KSKSVHESNVEQ 182
           +  L+         + Y +  ++G+G  G V K       +  AVK     S    +   
Sbjct: 11  RENLYFQGTFA---ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST 67

Query: 183 FINEVVILSQINHRNVVKLLG 203
            + EV +L +++H N++KL  
Sbjct: 68  ILREVELLKKLDHPNIMKLFE 88

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 57.0 bits (138), Expect = 5e-10
 Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSK-SVHESNVEQFINEVVILSQINHRN 197
           D+Y++  +IG G    V           VA+K+      ++++++ + E+  +SQ +H N
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74

Query: 198 VVKLLGC 204
           +V     
Sbjct: 75  IVSYYTS 81

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 56.9 bits (138), Expect = 5e-10
 Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 148 IGQGGQGTVFKGMLT--DGRI-VAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLG 203
           +G G  G+V +G+      +I VA+K  K    +++ E+ + E  I+ Q+++  +V+L+G
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77

Query: 204 CCLETEVPLLVYEFILNG 221
            C    + +LV E    G
Sbjct: 78  VCQAEAL-MLVMEMAGGG 94

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 57.5 bits (139), Expect = 6e-10
 Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 3/131 (2%)

Query: 93  KRRRKIKRKQKFFKRNGGLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGG 152
           +R   +  + K  +  G +    +    +   +          +   D+Y +   +G G 
Sbjct: 110 RRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGA 169

Query: 153 QGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP 211
            G V +      G   A K   + HES+ E    E+  +S + H  +V L     E +  
Sbjct: 170 FGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF-EDDNE 228

Query: 212 L-LVYEFILNG 221
           + ++YEF+  G
Sbjct: 229 MVMIYEFMSGG 239

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 55.8 bits (135), Expect = 1e-09
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 10/85 (11%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVI--LSQINHRNVVK 200
            +   +G+G  G V++G    G  VAVK   S  E   + +  E  +     + H N++ 
Sbjct: 11  TLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILG 66

Query: 201 LLGCCLETEVP----LLVYEFILNG 221
            +   + +        L+  +   G
Sbjct: 67  FIASDMTSRHSSTQLWLITHYHEMG 91

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 56.0 bits (136), Expect = 1e-09
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 6/83 (7%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQF----INEVVILSQINH 195
           + Y     IG+G  G V+K     G   A+KK +   E   E      I E+ IL ++ H
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED--EGIPSTTIREISILKELKH 59

Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
            N+VKL       +  +LV+E +
Sbjct: 60  SNIVKLYDVIHTKKRLVLVFEHL 82

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 55.7 bits (135), Expect = 1e-09
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 8/86 (9%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRI----VAVKKSKS---VHESNVEQFINEVVILSQINH 195
           ++   +G G  G V +G           VAVK  K         ++ FI EV  +  ++H
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80

Query: 196 RNVVKLLGCCLETEVPLLVYEFILNG 221
           RN+++L G  L   +  +V E    G
Sbjct: 81  RNLIRLYGVVLTPPM-KMVTELAPLG 105

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 55.9 bits (135), Expect = 1e-09
 Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 10/85 (11%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINE--VVILSQINHRNVVK 200
            +   IG+G  G V++G    G  VAVK   S  E     +  E  +     + H N++ 
Sbjct: 45  VLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILG 100

Query: 201 LLGCCLETEVP----LLVYEFILNG 221
            +    +         LV ++  +G
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHG 125

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 54.3 bits (131), Expect = 1e-09
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDG 55
          TD++ECLD       G C NT GSY CDCP     + 
Sbjct: 1  TDVNECLD-PTTCISGNCVNTPGSYICDCPPDFELNP 36

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 17/37 (45%), Positives = 20/37 (54%)

Query: 19  TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDG 55
            DIDEC +       GKC NT GS+ C CP G Y + 
Sbjct: 120 EDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNE 156

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 6/41 (14%), Positives = 11/41 (26%), Gaps = 4/41 (9%)

Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGC 59
           D          + + + +   G   C   IG+       C
Sbjct: 42 VDTRSGNC----YLDIRPRGDNGDTACSNEIGVGVSKASCC 78

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 40.8 bits (96), Expect = 7e-05
 Identities = 2/39 (5%), Positives = 6/39 (15%), Gaps = 1/39 (2%)

Query: 17  RATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDG 55
               + +               +     C    G   + 
Sbjct: 77  CCCSLGKAWGTPC-EMCPAVNTSEYKILCPGGEGFRPNP 114

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN--EVVILSQINHR 196
           + Y+    IG+G  G VFK      G+IVA+KK     +  V + I   E+ +L Q+ H 
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62

Query: 197 NVVKLLGCCLETEVPLLVYEFI 218
           N+V LL          LV+E+ 
Sbjct: 63  NLVNLLEVFRRKRRLHLVFEYC 84

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 18/111 (16%)

Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHE 177
             +   + K      K  E+    Y   ++IG G  G VF+  L +   VA+KK      
Sbjct: 18  LDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKK------ 71

Query: 178 SNVEQ---FIN-EVVILSQINHRNVVKLLGCCLET-----EVPL-LVYEFI 218
             V Q   F N E+ I+  + H NVV L            EV L LV E++
Sbjct: 72  --VLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 55.5 bits (134), Expect = 2e-09
 Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINE--VVILSQINHRNVVK 200
           ++ + IG+G  G V+ G    G  VAVK   +  E     +  E  +     + H N++ 
Sbjct: 40  QMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILG 95

Query: 201 LLGCCLETEVP----LLVYEFILNG 221
            +   ++         L+ ++  NG
Sbjct: 96  FIAADIKGTGSWTQLYLITDYHENG 120

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
             Y   R +G+GG    F+    D   + A K   KS  +     E+   E+ I   + H
Sbjct: 41  RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH 100

Query: 196 RNVVKLLGCCLETEVPL-LVYEFILNG 221
           ++VV   G   E    + +V E     
Sbjct: 101 QHVVGFHG-FFEDNDFVFVVLELCRRR 126

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN--EVVILSQINHR 196
           + Y+   ++G+G  G V K      GRIVA+KK     +  + + I   E+ +L Q+ H 
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84

Query: 197 NVVKLLGCCLETEVPLLVYEFI 218
           N+V LL  C + +   LV+EF+
Sbjct: 85  NLVNLLEVCKKKKRWYLVFEFV 106

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 132 SKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN----- 185
           + D++     Y+    +G+G   TV+K       +IVA+KK K  H S  +  IN     
Sbjct: 2   ALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61

Query: 186 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFI 218
           E+ +L +++H N++ LL          LV++F+
Sbjct: 62  EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 55.5 bits (134), Expect = 2e-09
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 13/88 (14%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFIN-EVVILSQINHR 196
             +Y  +++IG G  G V++  L D G +VA+KK         ++F N E+ I+ +++H 
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QDKRFKNRELQIMRKLDHC 107

Query: 197 NVVKLLGCCLET-----EVPL-LVYEFI 218
           N+V+L      +     EV L LV +++
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYV 135

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 55.6 bits (134), Expect = 3e-09
 Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 142 YKVSRIIGQGGQGTVFKG--MLTDGRIVAVKKSKSVHESN-VEQFINEVVILSQINHRNV 198
           Y+V   I  GG G ++       +GR V +K      ++      + E   L+++ H ++
Sbjct: 82  YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSI 141

Query: 199 VK 200
           V+
Sbjct: 142 VQ 143

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 53.1 bits (128), Expect = 3e-09
 Identities = 17/37 (45%), Positives = 18/37 (48%)

Query: 19  TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDG 55
            DIDEC         G C NT GS+ C CP GM  D 
Sbjct: 105 EDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDA 141

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 48.9 bits (117), Expect = 8e-08
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 18 ATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDG 55
          + DIDEC         G CKN+ GS+ C+C      D 
Sbjct: 1  SADIDECE--SSPCINGVCKNSPGSFICECSSESTLDP 36

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 55.3 bits (133), Expect = 3e-09
 Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 5/84 (5%)

Query: 139 TDNYKVSRIIGQGGQ--GTVFKGM-LTDGRIVAVKKSK--SVHESNVEQFINEVVILSQI 193
              Y++  +IG+G +   TV        G  V V++    +     V     E+ +    
Sbjct: 24  GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF 83

Query: 194 NHRNVVKLLGCCLETEVPLLVYEF 217
           NH N+V      +      +V  F
Sbjct: 84  NHPNIVPYRATFIADNELWVVTSF 107

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 54.5 bits (132), Expect = 3e-09
 Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
             Y   R +G+GG    F+    D   + A K   KS  +     E+   E+ I   + H
Sbjct: 15  RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH 74

Query: 196 RNVVKLLGCCLETEVPL-LVYEFILNG 221
           ++VV   G   E    + +V E     
Sbjct: 75  QHVVGFHG-FFEDNDFVFVVLELCRRR 100

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 55.1 bits (133), Expect = 3e-09
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 14/89 (15%)

Query: 129 LFTSKDLEKATDNYKVSRIIGQGGQGTVFKG-MLTDGRIVAVK---KSK----------S 174
           ++  K   K  ++Y   R +G G  G V            A+K   KS+           
Sbjct: 25  MYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNK 84

Query: 175 VHESNVEQFINEVVILSQINHRNVVKLLG 203
             E   E+  NE+ +L  ++H N++KL  
Sbjct: 85  NIEKFHEEIYNEISLLKSLDHPNIIKLFD 113

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 55.1 bits (133), Expect = 3e-09
 Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 3/85 (3%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN 194
               D Y +   +G G  G V + +    GR+   K   + +  +     NE+ I++Q++
Sbjct: 47  GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH 106

Query: 195 HRNVVKLLGCCLETEVPL-LVYEFI 218
           H  ++ L     E +  + L+ EF+
Sbjct: 107 HPKLINLHDAF-EDKYEMVLILEFL 130

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 6/89 (6%)

Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVH 176
            S   ++++  L   +D       +++  ++G G  G V+KG  +  G++ A+K    V 
Sbjct: 5   DSPARSLDEIDLSALRDPA---GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-VT 60

Query: 177 ESNVEQFINEVVILSQI-NHRNVVKLLGC 204
               E+   E+ +L +  +HRN+    G 
Sbjct: 61  GDEEEEIKQEINMLKKYSHHRNIATYYGA 89

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 54.5 bits (131), Expect = 4e-09
 Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK-----K 171
             +  +  +   F    L +    Y +   IGQG  G V   +      I A+K     K
Sbjct: 4   HHHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNK 63

Query: 172 SKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
            + ++  +VE+   EV ++ +++H N+ +L     + +   LV E    G
Sbjct: 64  IRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGG 113

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 54.2 bits (131), Expect = 4e-09
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 7/84 (8%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQF----INEVVILSQIN 194
           D Y+    +G+G  G V+K +       VA+K+ +  HE   E      I EV +L ++ 
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE--EGVPGTAIREVSLLKELQ 91

Query: 195 HRNVVKLLGCCLETEVPLLVYEFI 218
           HRN+++L           L++E+ 
Sbjct: 92  HRNIIELKSVIHHNHRLHLIFEYA 115

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 54.0 bits (130), Expect = 5e-09
 Identities = 15/83 (18%), Positives = 34/83 (40%), Gaps = 8/83 (9%)

Query: 142 YKVSRIIGQGGQGTVFKGMLTD---GRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
           Y++    G       ++    D    R VA+        + +  +++ ++  + LS+I+ 
Sbjct: 33  YRLLIFHGGVPPLQFWQA--LDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDK 90

Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
             V ++L         L+V E+I
Sbjct: 91  PGVARVLDVVHTRAGGLVVAEWI 113

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 54.2 bits (130), Expect = 6e-09
 Identities = 18/119 (15%), Positives = 35/119 (29%), Gaps = 10/119 (8%)

Query: 113 LRQELSSNEGNIEKT----KLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD----- 163
           L + +SS     E       +    + +  +    V  ++G+G    V++    D     
Sbjct: 34  LSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAK 93

Query: 164 -GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
             +   +K  K  +          +  L        +K     L     +LV E    G
Sbjct: 94  NKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYG 152

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 53.7 bits (130), Expect = 6e-09
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 7/69 (10%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEVVILSQIN 194
              +    ++G G    VF       G++ A+K   KS +  +S++E   NE+ +L +I 
Sbjct: 8   RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE---NEIAVLKKIK 64

Query: 195 HRNVVKLLG 203
           H N+V L  
Sbjct: 65  HENIVTLED 73

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 53.7 bits (130), Expect = 6e-09
 Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 6/95 (6%)

Query: 132 SKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEV 187
           +  + +  +++KV  ++G+G    V++   +  G  VA+K   K        V++  NEV
Sbjct: 3   ATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62

Query: 188 VILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
            I  Q+ H ++++L     E    + LV E   NG
Sbjct: 63  KIHCQLKHPSILELYN-YFEDSNYVYLVLEMCHNG 96

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 53.8 bits (130), Expect = 7e-09
 Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 15/92 (16%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQF----INEVVILSQIN 194
             Y+    IGQG  G VFK      G+ VA+KK    +E   E F    + E+ IL  + 
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLK 74

Query: 195 HRNVVKLLGCCLETEVPL--------LVYEFI 218
           H NVV L+  C     P         LV++F 
Sbjct: 75  HENVVNLIEICRTKASPYNRCKGSIYLVFDFC 106

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 53.8 bits (129), Expect = 7e-09
 Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 9/91 (9%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD------GRIVAVKKSKSVH-ESNVEQFINEVVILSQ 192
           D  K+ + +G+G  G V +            R VAVK  K     S     ++E+ IL  
Sbjct: 22  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81

Query: 193 I-NHRNVVKLLGCCLETEVPLLV-YEFILNG 221
           I +H NVV LLG C +   PL+V  EF   G
Sbjct: 82  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 53.7 bits (130), Expect = 7e-09
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 7/84 (8%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQF----INEVVILSQIN 194
           +N++    IG+G  G V+K      G +VA+KK +   E+  E      I E+ +L ++N
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET--EGVPSTAIREISLLKELN 60

Query: 195 HRNVVKLLGCCLETEVPLLVYEFI 218
           H N+VKLL          LV+EF+
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL 84

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 53.7 bits (129), Expect = 8e-09
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSK-SVHESNVEQFINEVVILSQINHRN 197
            +++  + +G+GG G VF+     D    A+K+ +    E   E+ + EV  L+++ H  
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 198 VVKLLGCCLETE 209
           +V+     LET 
Sbjct: 66  IVRYFNAWLETP 77

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 53.9 bits (130), Expect = 8e-09
 Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 9/94 (9%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK------KSKSVHESNVEQFINEVV 188
           +K  D Y +   +G G    V K    + G   A K         S      E+   EV 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 189 ILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
           IL Q+ H N++ L     E    + L+ E +  G
Sbjct: 68  ILRQVLHPNIITLHDVY-ENRTDVVLILELVSGG 100

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 53.3 bits (129), Expect = 1e-08
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 7/84 (8%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQF----INEVVILSQIN 194
             Y+    IG+G  GTVFK        IVA+K+ +   +   E      + E+ +L ++ 
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD--EGVPSSALREICLLKELK 59

Query: 195 HRNVVKLLGCCLETEVPLLVYEFI 218
           H+N+V+L       +   LV+EF 
Sbjct: 60  HKNIVRLHDVLHSDKKLTLVFEFC 83

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 19  TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVG 58
           TDIDEC +     C G C N  G++ C C       G++G
Sbjct: 78  TDIDECENGG--FCSGVCHNLPGTFECICGPDSALAGQIG 115

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 4/42 (9%)

Query: 20 DIDECLDKEKYHCEGKCKN-TIGSYTCDCPIGMYGDGKVGCR 60
           +D C      +CE +C+     SY C C  G         R
Sbjct: 3  PVDPCFR---ANCEYQCQPLDQTSYLCVCAEGFAPIPHEPHR 41

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 9/91 (9%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSK---SVHESNVEQFINEVVILS 191
            D+Y++   +G G    V K      G+  A K   K +   S    + E+   EV IL 
Sbjct: 4   EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63

Query: 192 QINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
           +I H N++ L     E +  + L+ E +  G
Sbjct: 64  EIRHPNIITLHDIF-ENKTDVVLILELVSGG 93

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKG-MLTDGRIVAVK--KSKSVHESN 179
           +  +  L+         + Y +  ++G+G  G V K       +  AVK     S    +
Sbjct: 8   SSGRENLYFQGTFA---ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD 64

Query: 180 VEQFINEVVILSQINHRNVVKLLGCC 205
               + EV +L +++H N++KL    
Sbjct: 65  TSTILREVELLKKLDHPNIMKLFEIL 90

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN 194
           ++  + Y ++  +G+G  G V + +  +  +    K    V  ++      E+ IL+   
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAK-FVKVKGTDQVLVKKEISILNIAR 59

Query: 195 HRNVVKLLGCCLETEVPL-LVYEFI 218
           HRN++ L     E+   L +++EFI
Sbjct: 60  HRNILHLHESF-ESMEELVMIFEFI 83

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 126 KTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKG-MLTDGRIVAVKK-SKSVHESNVEQF 183
           +  L+    ++   D +   R +G G  G V      + G    +K  +K   +  +EQ 
Sbjct: 11  RENLYFQGTID---DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQI 67

Query: 184 INEVVILSQINHRNVVKLLG 203
             E+ +L  ++H N++K+  
Sbjct: 68  EAEIEVLKSLDHPNIIKIFE 87

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 9/94 (9%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK------KSKSVHESNVEQFINEVV 188
           +K  D Y +   +G G    V K    + G   A K         S    + E+   EV 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 189 ILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
           IL Q+ H NV+ L     E    + L+ E +  G
Sbjct: 68  ILRQVLHHNVITLHDVY-ENRTDVVLILELVSGG 100

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 8/84 (9%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQF----INEVVILSQIN 194
           + Y     +G+G   TV+KG       +VA+K+ +  HE   E      I EV +L  + 
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE---EGAPCTAIREVSLLKDLK 58

Query: 195 HRNVVKLLGCCLETEVPLLVYEFI 218
           H N+V L       +   LV+E++
Sbjct: 59  HANIVTLHDIIHTEKSLTLVFEYL 82

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 49.6 bits (119), Expect = 1e-08
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMY--GDGK 56
          D+DEC  K        CKN  G + C+CP G       K
Sbjct: 2  DVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSK 40

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 45.3 bits (108), Expect = 5e-07
 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 3/29 (10%)

Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDC 47
           DIDEC +     C   C N  G YTC C
Sbjct: 43 EDIDECSEN---MCAQLCVNYPGGYTCYC 68

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 138 ATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQF----INEVVILSQ 192
           ++  +K    +G G   TV+KG+  T G  VA+K+ K   E   E      I E+ ++ +
Sbjct: 3   SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE---EGTPSTAIREISLMKE 59

Query: 193 INHRNVVKLLGCCLETEVPLLVYEFI 218
           + H N+V+L           LV+EF+
Sbjct: 60  LKHENIVRLYDVIHTENKLTLVFEFM 85

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 9/91 (9%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSK---SVHESNVEQFINEVV 188
           E   D Y     +G G    V K    + G   A K   K +   S    + E    EV 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66

Query: 189 ILSQINHRNVVKLLGCCLETEVPL-LVYEFI 218
           IL +I H NV+ L     E +  + L+ E +
Sbjct: 67  ILKEIQHPNVITLHEVY-ENKTDVILILELV 96

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 10/92 (10%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSK-----SVHESNVEQFINEVVI 189
            D Y +S+ +G G  G V         + VA++   K K     +           E+ I
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193

Query: 190 LSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           L ++NH  ++K+     + E   +V E +  G
Sbjct: 194 LKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG 224

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 8/94 (8%)

Query: 131 TSKDLEKATDNYKVSRI-IGQGGQGTVFKGM---LTDGRIVAVKKSKSVHESNVEQFINE 186
            S + E+  D ++     +G+G  G V+K       D +  A+K+ +            E
Sbjct: 11  LSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG--TGISMSACRE 68

Query: 187 VVILSQINHRNVVKLLGCCLE-TEVPL-LVYEFI 218
           + +L ++ H NV+ L    L   +  + L++++ 
Sbjct: 69  IALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 102

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 8/90 (8%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK-----KSKSVHESNVEQFINEVVILSQ 192
            D Y++  +IG+G    V + +    G+  AVK     K  S    + E    E  I   
Sbjct: 23  EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82

Query: 193 INHRNVVKLLGCCLETEVPL-LVYEFILNG 221
           + H ++V+LL     ++  L +V+EF+   
Sbjct: 83  LKHPHIVELLETY-SSDGMLYMVFEFMDGA 111

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
           +++++ R +G+G  G V+         I+A+K   K++        Q   EV I S + H
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68

Query: 196 RNVVKLLGCCLETEVPL-LVYEFILNG 221
            N+++L G        + L+ E+   G
Sbjct: 69  PNILRLYG-YFHDATRVYLILEYAPLG 94

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 3/89 (3%)

Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK--KSKS 174
            +    + +   F      K +DNY V   +G+G    V + +  T G   A K   +K 
Sbjct: 7   MTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK 66

Query: 175 VHESNVEQFINEVVILSQINHRNVVKLLG 203
           +   + ++   E  I  ++ H N+V+L  
Sbjct: 67  LSARDFQKLEREARICRKLQHPNIVRLHD 95

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 52.5 bits (126), Expect = 2e-08
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 4/63 (6%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNV 198
           +     +I+G G  GTV       GR VAVK+   +     +  + E+ +L++  +H NV
Sbjct: 15  NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKR---MLIDFCDIALMEIKLLTESDDHPNV 71

Query: 199 VKL 201
           ++ 
Sbjct: 72  IRY 74

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 52.4 bits (125), Expect = 2e-08
 Identities = 9/75 (12%), Positives = 22/75 (29%), Gaps = 4/75 (5%)

Query: 135 LEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEVVIL 190
           L +     K+   +  G +  VF    +      A+K          S +E+        
Sbjct: 57  LSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAA 116

Query: 191 SQINHRNVVKLLGCC 205
           +++   +  +     
Sbjct: 117 ARLLGESPEEARDRR 131

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINH 195
           T+ Y++   +G+G    V + + +  G+  A     +K +   + ++   E  I   + H
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69

Query: 196 RNVVKLLG 203
            N+V+L  
Sbjct: 70  PNIVRLHD 77

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 52.0 bits (125), Expect = 3e-08
 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 5/93 (5%)

Query: 130 FTSKDLEKATDNYKVSR--IIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINE 186
             +         Y VS+  I+G G  G V K      G  +A K  K+    + E+  NE
Sbjct: 77  IVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNE 136

Query: 187 VVILSQINHRNVVKLLGCCLETEVPL-LVYEFI 218
           + +++Q++H N+++L     E++  + LV E++
Sbjct: 137 ISVMNQLDHANLIQLYD-AFESKNDIVLVMEYV 168

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 51.7 bits (124), Expect = 4e-08
 Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 7/72 (9%)

Query: 135 LEKATDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFIN-EVVILSQ 192
           LE ++  Y + + +G G  G V +    + G+  A+KK   V      ++ N E+ I+  
Sbjct: 2   LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKK---VL--QDPRYKNRELDIMKV 56

Query: 193 INHRNVVKLLGC 204
           ++H N++KL+  
Sbjct: 57  LDHVNIIKLVDY 68

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 51.5 bits (124), Expect = 4e-08
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 10/95 (10%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSK-----SVHESNVEQFINE 186
           +   D Y +S+ +G G  G V         + VA+K   K K     +           E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65

Query: 187 VVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           + IL ++NH  ++K+     + E   +V E +  G
Sbjct: 66  IEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGG 99

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 51.4 bits (124), Expect = 4e-08
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINH 195
           +DNY V   +G+G    V + +  T G   A K   +K +   + ++   E  I  ++ H
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64

Query: 196 RNVVKLLG 203
            N+V+L  
Sbjct: 65  PNIVRLHD 72

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 51.3 bits (123), Expect = 5e-08
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 141 NYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-HRNVV 199
           ++    ++G G +GT+    + D R VAVK+   +          EV +L + + H NV+
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKR---ILPECFSFADREVQLLRESDEHPNVI 81

Query: 200 KLLGC 204
           +    
Sbjct: 82  RYFCT 86

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1 Length = 53

 Score = 47.1 bits (112), Expect = 6e-08
 Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 7/40 (17%)

Query: 18 ATDIDECLD-------KEKYHCEGKCKNTIGSYTCDCPIG 50
          A D+DEC           +  C+  C N +G Y C C  G
Sbjct: 1  AVDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPG 40

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 50.8 bits (122), Expect = 7e-08
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 9/98 (9%)

Query: 114 RQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK-- 170
           R    +   ++  TKL   K+ E     Y+V  ++G GG G+V+ G+ ++D   VA+K  
Sbjct: 17  RGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHV 76

Query: 171 -KSK---SVHESNVEQFINEVVILSQINHR--NVVKLL 202
            K +        N  +   EVV+L +++     V++LL
Sbjct: 77  EKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 114

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 48.7 bits (116), Expect = 1e-07
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 19  TDIDECLDKEKY-HCEGKCKNTIGSYTCDCPIGMYGDG 55
            D+DEC   +        C NT+GSY+C C  G     
Sbjct: 94  QDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRH 131

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 47.9 bits (114), Expect = 2e-07
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 19 TDIDECLDKEKYHC--EGKCKNTIGSYTCDCPIG 50
           DI+EC    K  C     C NT GSY C C  G
Sbjct: 42 DDINECATLSKVSCGKFSDCWNTEGSYDCVCSPG 75

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 11/75 (14%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKK--SKSVHESNVEQFIN---------EV 187
              Y V R I  G  G V  G+ ++G  VA+K+  +       V    +         E+
Sbjct: 21  QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80

Query: 188 VILSQINHRNVVKLL 202
            +L+  +H N++ L 
Sbjct: 81  RLLNHFHHPNILGLR 95

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 13/102 (12%)

Query: 132 SKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFIN-- 185
            KD E     Y++  ++G+GG GTVF G  LTD   VA+K   +++ +  S +   +   
Sbjct: 23  GKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCP 82

Query: 186 -EVVILSQIN----HRNVVKLLGCCLETEVPL-LVYEFILNG 221
            EV +L ++     H  V++LL    ET+    LV E  L  
Sbjct: 83  LEVALLWKVGAGGGHPGVIRLLD-WFETQEGFMLVLERPLPA 123

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 140 DNYKVSRIIGQGGQGTVFKG-MLTDGRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
           D++ + R +G+G  G V+      +  I+A+K   KS+   E    Q   E+ I S + H
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73

Query: 196 RNVVKLLGCCLETEVPL-LVYEFILNG 221
            N++++          + L+ EF   G
Sbjct: 74  PNILRMYN-YFHDRKRIYLMLEFAPRG 99

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 49.5 bits (119), Expect = 2e-07
 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 14/96 (14%)

Query: 137 KATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN-----EVVIL 190
            AT  Y+    IG G  GTV+K      G  VA+K  +  +       +      EV +L
Sbjct: 6   MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65

Query: 191 SQIN---HRNVVKLLGCCLETEVPL-----LVYEFI 218
            ++    H NVV+L+  C  +         LV+E +
Sbjct: 66  RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 101

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 7/72 (9%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKG-MLTDGRIVAVK---KSKSVHESNVEQFINEVVILS 191
                 Y +   IG+G  G V            A K   K       +V++F  E+ I+ 
Sbjct: 5   GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMK 61

Query: 192 QINHRNVVKLLG 203
            ++H N+++L  
Sbjct: 62  SLDHPNIIRLYE 73

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEVVIL 190
            + +  +D ++V   +G+G    V++       +  A+K   K+V +  V     E+ +L
Sbjct: 46  SNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR---TEIGVL 102

Query: 191 SQINHRNVVKLLG 203
            +++H N++KL  
Sbjct: 103 LRLSHPNIIKLKE 115

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 49.2 bits (117), Expect = 3e-07
 Identities = 15/58 (25%), Positives = 19/58 (32%), Gaps = 5/58 (8%)

Query: 19 TDIDECLDK----EKYHCEGKCKNTIGSYTCD-CPIGMYGDGKVGCRGFRIITIVAGC 71
           D+DEC              +C NT   + C  CP    G+  VG       T    C
Sbjct: 42 EDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVC 99

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 43.9 bits (103), Expect = 2e-05
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 7/40 (17%)

Query: 20 DIDECLDKEKYHC--EGKCKNT-IGSYTCD-CPIGMYGDG 55
          D D CL      C    +C +   GS++C  CP+G  G+G
Sbjct: 2  DPDGCLSNP---CFPGAQCSSFPDGSWSCGFCPVGFLGNG 38

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 5/46 (10%)

Query: 19  TDIDECLD-KEKYHCEGKCKN----TIGSYTCDCPIGMYGDGKVGC 59
              + C D     H   +C      +   Y C+C  G  GDG +  
Sbjct: 100 EPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICG 145

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 48.4 bits (116), Expect = 4e-07
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 8/83 (9%)

Query: 142 YKVSRIIGQGGQGTVFKGMLTD---GRIVAVK--KSKSVHESN-VEQFINEVVILSQINH 195
           YK+   +G GG  TV+     D      VA+K        +   +++F  EV   SQ++H
Sbjct: 13  YKIVDKLGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70

Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
           +N+V ++    E +   LV E+I
Sbjct: 71  QNIVSMIDVDEEDDCYYLVMEYI 93

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 48.4 bits (116), Expect = 4e-07
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHR 196
            D+Y++ R +G+G    VF+ + +T+   V VK  K V +   ++   E+ IL  +    
Sbjct: 35  QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK---KKIKREIKILENLRGGP 91

Query: 197 NVVKLLGCCL--ETEVPLLVYEFILN 220
           N++ L        +  P LV+E + N
Sbjct: 92  NIITLADIVKDPVSRTPALVFEHVNN 117

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 48.2 bits (115), Expect = 5e-07
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 4/94 (4%)

Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVV 188
           F  + +E      +V R++ +GG   V++   +  GR  A+K+  S  E      I EV 
Sbjct: 18  FVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVC 77

Query: 189 ILSQI-NHRNVVKLLGCCLET--EVPLLVYEFIL 219
            + ++  H N+V+          E      EF+L
Sbjct: 78  FMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLL 111

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 47.7 bits (114), Expect = 7e-07
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 9/97 (9%)

Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKG--MLTDGRIVAVK---KSKSVHESNVEQFIN 185
           +  D +    NY++ + IG+G    V     +LT GR VA+K   K++ ++ +++++   
Sbjct: 6   SCADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQ-LNPTSLQKLFR 63

Query: 186 EVVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
           EV I+  +NH N+VKL    +ETE  L L+ E+   G
Sbjct: 64  EVRIMKILNHPNIVKLFE-VIETEKTLYLIMEYASGG 99

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 45.4 bits (108), Expect = 8e-07
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 5/44 (11%)

Query: 19  TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIG--MYGDGKVGCR 60
            DIDEC D +   C   C N  G Y C C  G  +    K  C+
Sbjct: 67  EDIDECQDPDT--CSQLCVNLEGGYKCQCEEGFQLDPHTK-ACK 107

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 43.5 bits (103), Expect = 3e-06
 Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 1/32 (3%)

Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIG 50
             +ECLD     C   C +    Y C CP G
Sbjct: 27 MGTNECLD-NNGGCSYVCNDLKIGYECLCPDG 57

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 47.2 bits (113), Expect = 1e-06
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 16/96 (16%)

Query: 137 KATDNYKVSRIIGQGGQGTVFKG--MLTDGRIVAVKKSKSVHESNVEQF----INEVVIL 190
           +A   Y+    IG+G  G VFK   +   GR VA+K+ +   ++  E      I EV +L
Sbjct: 8   RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR--VQTGEEGMPLSTIREVAVL 65

Query: 191 SQIN---HRNVVKLLGCCLETEVPL-----LVYEFI 218
             +    H NVV+L   C  +         LV+E +
Sbjct: 66  RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 101

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 13/93 (13%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQF--INEVVILSQ 192
            K  D ++V R+ GQG  GTV  G     G  VA+KK   V +    +   +  +  L+ 
Sbjct: 19  RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKK---VIQDPRFRNRELQIMQDLAV 75

Query: 193 INHRNVVKLL------GCCLETEVPL-LVYEFI 218
           ++H N+V+L       G     ++ L +V E++
Sbjct: 76  LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV 108

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 12/94 (12%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSK-----SVHESNVEQFINEVVI 189
              Y    +IG+G    V + +    G   AVK    +         E   E    E  I
Sbjct: 93  YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHI 152

Query: 190 LSQI-NHRNVVKLLGCCLETEVPL-LVYEFILNG 221
           L Q+  H +++ L+    E+   + LV++ +  G
Sbjct: 153 LRQVAGHPHIITLIDSY-ESSSFMFLVFDLMRKG 185

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 46.4 bits (110), Expect = 3e-06
 Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 6/92 (6%)

Query: 114 RQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKS 172
           R++  S++      +  +   +    D Y++  +IG G  G V +     + R+VA+KK 
Sbjct: 30  RKQHHSSKPTASMPRPHSDWQI---PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKI 86

Query: 173 KSVHESNVE--QFINEVVILSQINHRNVVKLL 202
             V E  ++  + + E+ IL+++NH +VVK+L
Sbjct: 87  LRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 46.3 bits (110), Expect = 3e-06
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 8/87 (9%)

Query: 141 NYKVSRIIGQGGQGTVFKG--MLTDGRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
           +Y +   +G G  G V  G   LT G  VAVK   + K      V +   E+  L    H
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELT-GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH 75

Query: 196 RNVVKLLGCCLETEVPL-LVYEFILNG 221
            +++KL    + T   + +V E++  G
Sbjct: 76  PHIIKLYQ-VISTPSDIFMVMEYVSGG 101

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 19/102 (18%), Positives = 42/102 (41%), Gaps = 7/102 (6%)

Query: 126 KTKLFTSKDLEKATDNYKV-SRIIGQGGQGTVFKGM-LTDGRIVAVK--KSKSVHESNVE 181
            T+    + +E   + Y + S+ +G+G    V + +  + G+  A K  K +   +    
Sbjct: 14  GTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRA 73

Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPL-LVYEFILNG 221
           + ++E+ +L        V+ L     E    + L+ E+   G
Sbjct: 74  EILHEIAVLELAKSCPRVINLHEVY-ENTSEIILILEYAAGG 114

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 45.7 bits (109), Expect = 4e-06
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 8/64 (12%)

Query: 142 YKVSRIIGQGGQGTVFKGMLTD---GRIVAVKKSKSVHESN---VEQFINEVVILSQINH 195
           Y++  I+G GG   V      D    R VAVK  ++    +     +F  E    + +NH
Sbjct: 14  YELGEILGFGGMSEVHLA--RDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71

Query: 196 RNVV 199
             +V
Sbjct: 72  PAIV 75

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEVVILSQINHR 196
           +Y +   +G G  G V  G     G  VAVK   + K      V +   E+  L    H 
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71

Query: 197 NVVKLLGCCLETEVPL-LVYEFILNG 221
           +++KL    + T     +V E++  G
Sbjct: 72  HIIKLYQ-VISTPTDFFMVMEYVSGG 96

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
              Y   + +G GG G VF  +  D  + VA+KK       +V+  + E+ I+ +++H N
Sbjct: 10  GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDN 69

Query: 198 VVKLL 202
           +VK+ 
Sbjct: 70  IVKVF 74

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 45.1 bits (107), Expect = 6e-06
 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 11/91 (12%)

Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSK-----SVHESNVEQFINEVVILS 191
            Y     +G G  G V+  +     + V VK   K K      + +  + +   E+ ILS
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 192 QINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
           ++ H N++K+L    E +    LV E   +G
Sbjct: 85  RVEHANIIKVLD-IFENQGFFQLVMEKHGSG 114

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 45.1 bits (107), Expect = 7e-06
 Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 3/67 (4%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVE--QFINEVVILSQINH 195
            DNY +  +IG+G  G V+     +  + VA+KK   + E  ++  + + E+ IL+++  
Sbjct: 25  PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKS 84

Query: 196 RNVVKLL 202
             +++L 
Sbjct: 85  DYIIRLY 91

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 44.6 bits (106), Expect = 8e-06
 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 13/95 (13%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNV------EQFINEVV 188
            +NY+   I+G+G    V + +     +  AVK    +     S        E  + EV 
Sbjct: 16  YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75

Query: 189 ILSQIN-HRNVVKLLGCCLETEVPL-LVYEFILNG 221
           IL +++ H N+++L     ET     LV++ +  G
Sbjct: 76  ILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKG 109

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 44.7 bits (106), Expect = 9e-06
 Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 22/127 (17%)

Query: 113 LRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVK-- 170
           ++  LS+    I   K    K+ +K  ++Y++ R + QG    +        +  A+K  
Sbjct: 6   MKDILSNYSNLIYLNK--YVKEKDKYINDYRIIRTLNQGKFNKIILCEKD-NKFYALKKY 62

Query: 171 ---------------KSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL-LV 214
                            K   +S  + F NE+ I++ I +   +   G  +     + ++
Sbjct: 63  EKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEG-IITNYDEVYII 121

Query: 215 YEFILNG 221
           YE++ N 
Sbjct: 122 YEYMEND 128

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFIN-EVVILSQINH 195
            Y +  ++G+G  G V + +        AVK   K K     N E  +  E+ +L ++ H
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65

Query: 196 RNVVKL 201
           +NV++L
Sbjct: 66  KNVIQL 71

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 8/64 (12%)

Query: 142 YKVSRIIGQGGQGTVFKGMLTD---GRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
           Y++ R++G+GG G V++    D    RIVA+K   ++ S       +   E     ++  
Sbjct: 36  YRLRRLVGRGGMGDVYEA--EDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQE 93

Query: 196 RNVV 199
            +VV
Sbjct: 94  PHVV 97

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 9/71 (12%)

Query: 139 TDNYKVSR-IIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEVVILSQI 193
            D Y++   ++G+G    V   + L   +  AVK   K      S V     EV +L Q 
Sbjct: 11  EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVF---REVEMLYQC 67

Query: 194 -NHRNVVKLLG 203
             HRNV++L+ 
Sbjct: 68  QGHRNVLELIE 78

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 44.0 bits (103), Expect = 2e-05
 Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 3/40 (7%)

Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIG--MYGDGK 56
          T  + C       C  KC+   G+  C C  G  +  DG+
Sbjct: 1  TGEENCNVNNG-GCAQKCQMIRGAVQCTCHTGYRLTEDGR 39

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 4/85 (4%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK-KSKSVHESNVEQFINEVVILSQINHRN 197
           +++ + + +G+G  G V   +       VAVK           E    E+ I   +NH N
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66

Query: 198 VVKLLGCCLETEVPL-LVYEFILNG 221
           VVK  G          L  E+   G
Sbjct: 67  VVKFYG-HRREGNIQYLFLEYCSGG 90

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 4/85 (4%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK-KSKSVHESNVEQFINEVVILSQINHRN 197
           +++ + + +G+G  G V   +       VAVK           E    E+ I   +NH N
Sbjct: 7   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66

Query: 198 VVKLLGCCLETEVPL-LVYEFILNG 221
           VVK  G          L  E+   G
Sbjct: 67  VVKFYG-HRREGNIQYLFLEYCSGG 90

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 18/74 (24%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFIN---------EVV 188
           + ++++  ++G+G  G V        G IVA+KK        +E F           E+ 
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKK--------IEPFDKPLFALRTLREIK 61

Query: 189 ILSQINHRNVVKLL 202
           IL    H N++ + 
Sbjct: 62  ILKHFKHENIITIF 75

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 6/66 (9%)

Query: 141 NYKVSRIIGQGGQGTVFKG--MLTDGRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
            Y +   +G+G  G V       T  + VA+K   +          +   E+  L  + H
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKT-QQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH 68

Query: 196 RNVVKL 201
            +++KL
Sbjct: 69  PHIIKL 74

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEV-VI 189
           +  +   ++ K    IG+G  G+V K +    G+I+AVK+   +V E   +Q + ++ V+
Sbjct: 15  QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV 74

Query: 190 LSQINHRNVVKLLGCCL 206
           +   +   +V+  G   
Sbjct: 75  MRSSDCPYIVQFYGALF 91

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 17/91 (18%), Positives = 40/91 (43%), Gaps = 4/91 (4%)

Query: 118 SSNEGNIEKTKLFTS-KDLEKATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKK-SKS 174
           SS     +   L    +  +   ++ +    +G G  G V+K      G ++AVK+  +S
Sbjct: 2   SSGSSGKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS 61

Query: 175 VHESNVEQFINEV-VILSQINHRNVVKLLGC 204
            ++   ++ + ++ V+L   +   +V+  G 
Sbjct: 62  GNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 42.2 bits (100), Expect = 6e-05
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
           +++K  +I+G+G   TV         R  A+K   K   + E+ V     E  ++S+++H
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89

Query: 196 RNVVKLLGCCLETEVPL-LVYEFILNG 221
              VKL     + +  L     +  NG
Sbjct: 90  PFFVKLYFTF-QDDEKLYFGLSYAKNG 115

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} Length = 349

 Score = 42.2 bits (98), Expect = 7e-05
 Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 21 IDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGC 59
          ++EC   E+ +C   C N+ G++ C C  G         
Sbjct: 1  VNECA--EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRS 37

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* Length = 114

 Score = 40.1 bits (94), Expect = 7e-05
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 19 TDIDECLDKEKYHCE-------GKCKNTIGSYTCDCPIGMYGD 54
           D D+CL     H         G C + IGS++CDC  G  G 
Sbjct: 4  VDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGR 46

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 41.9 bits (99), Expect = 8e-05
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSV--HESNVEQFINEVVILSQINH 195
              Y     +G G  G+V   +    G  VA+KK       E   ++   E+++L  + H
Sbjct: 23  PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH 82

Query: 196 RNVVKLL 202
            NV+ LL
Sbjct: 83  ENVIGLL 89

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 41.6 bits (98), Expect = 8e-05
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 13/73 (17%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN------ 194
           Y + R +G G   TV+    + +   VA+K  +   +   E   +E+ +L ++N      
Sbjct: 21  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTK 79

Query: 195 -----HRNVVKLL 202
                  +++KLL
Sbjct: 80  EDSMGANHILKLL 92

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 41.5 bits (97), Expect = 9e-05
 Identities = 14/105 (13%), Positives = 28/105 (26%), Gaps = 4/105 (3%)

Query: 116 ELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---K 171
            L S              +L +         ++GQ       +      G    V     
Sbjct: 49  SLVSTSLWNTGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYF 108

Query: 172 SKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE 216
           ++    + ++Q   EV+ L  +      K     L    P  + +
Sbjct: 109 TERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 153

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 41.8 bits (98), Expect = 9e-05
 Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 9/93 (9%)

Query: 114 RQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKK- 171
           R+ L +     +K       D EK          +G G  G VFK      G ++A K  
Sbjct: 14  RKRLEAFLTQKQKVGELKDDDFEKI-------SELGAGNGGVVFKVSHKPSGLVMARKLI 66

Query: 172 SKSVHESNVEQFINEVVILSQINHRNVVKLLGC 204
              +  +   Q I E+ +L + N   +V   G 
Sbjct: 67  HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 99

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1 Length = 159

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 16/33 (48%), Positives = 17/33 (51%)

Query: 18  ATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIG 50
           ATDI+EC D     C   C N IG Y C CP  
Sbjct: 114 ATDINECTDFVDVPCSHFCNNFIGGYFCSCPPE 146

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 23/115 (20%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 112 LLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK 170
           L + +  ++     +  +   K++    D++++ ++IG+G    V    +   G++ A+K
Sbjct: 33  LAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMK 92

Query: 171 ---KSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
              K   +    V  F  E  +L   + R + +L     + E  L LV E+   G
Sbjct: 93  IMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH-FAFQDENYLYLVMEYY-VG 145

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 18 ATDIDECLDKEKYHCE--GKCKNTIGSYTCDCPIGMYGD 54
          A D+DEC       CE  GKC NT+GS+ C C  G  G 
Sbjct: 2  AQDVDECSLGAN-PCEHAGKCINTLGSFECQCLQGYTGP 39

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 5/38 (13%)

Query: 19  TDIDECLDKEKYHCE--GKCKNTIGSYTCDCPIGMYGD 54
            + DEC       C   G+C + I  + C+CP G  G 
Sbjct: 81  VNTDECASSP---CLHNGRCLDKINEFQCECPTGFTGH 115

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 5/38 (13%)

Query: 19 TDIDECLDKEKYHCE--GKCKNTIGSYTCDCPIGMYGD 54
           D++EC+      C+    C + IG + C C  G  G 
Sbjct: 43 IDVNECVSN---PCQNDATCLDQIGEFQCICMPGYEGV 77

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSV--HESNVEQFINEVVILSQINH 195
              Y+  + IG G QG V         R VA+KK      ++++ ++   E+V++  +NH
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83

Query: 196 RNVVKLL 202
           +N++ LL
Sbjct: 84  KNIIGLL 90

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 41.2 bits (96), Expect = 1e-04
 Identities = 11/79 (13%), Positives = 23/79 (29%), Gaps = 4/79 (5%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEVVILSQINHRN 197
                ++GQ       +      G    V     ++    + ++Q   EV+ L  +    
Sbjct: 80  LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIK 139

Query: 198 VVKLLGCCLETEVPLLVYE 216
             K     L    P  + +
Sbjct: 140 NQKQAKVHLRFIFPFDLVK 158

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 18/74 (24%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFIN---------EVV 188
              Y     IG+G  G V           VA+KK        +  F +         E+ 
Sbjct: 26  GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKK--------ISPFEHQTYCQRTLREIK 77

Query: 189 ILSQINHRNVVKLL 202
           IL +  H N++ + 
Sbjct: 78  ILLRFRHENIIGIN 91

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 41.4 bits (96), Expect = 1e-04
 Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)

Query: 22 DECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGC 59
          +ECLD     C   C +    Y C CP G     +  C
Sbjct: 1  NECLDN-NGGCSHVCNDLKIGYECLCPDGFQLVAQRRC 37

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A Length = 39

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 5/37 (13%)

Query: 20 DIDECLDKEKYHCE--GKCKNTIGSYTCDCPIGMYGD 54
          D D+C       C   G CK+ I SY C CP G  G 
Sbjct: 2  DGDQCESNP---CLNGGSCKDDINSYECWCPFGFEGK 35

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 135 LEKATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKK-SKSVHESNVEQFINEV-VILS 191
           +E   D+ +    +G+G  G V K      G+I+AVK+   +V+    ++ + ++ + + 
Sbjct: 2   MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61

Query: 192 QINHRNVVKLLGC 204
            ++    V   G 
Sbjct: 62  TVDCPFTVTFYGA 74

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSV--HESNVEQFINEVVILSQINH 195
              Y+  + IG G QG V         R VA+KK      ++++ ++   E+V++  +NH
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120

Query: 196 RNVVKLL 202
           +N++ LL
Sbjct: 121 KNIISLL 127

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A Length = 186

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 7/42 (16%), Positives = 12/42 (28%), Gaps = 6/42 (14%)

Query: 18 ATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGC 59
          A  +D           G+       + C C  G+    +  C
Sbjct: 6  AVTVDTI------CXNGQLVQMSNHFXCMCNEGLVHLSENTC 41

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 19/93 (20%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHR---- 196
           + V R +G G  G V     + + +  AVK  +++ +        E  IL +I +     
Sbjct: 37  FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINN 95

Query: 197 -NVVKLLGC-------CLETEVPLL---VYEFI 218
            N+VK  G        CL  E   L   +YE I
Sbjct: 96  NNIVKYHGKFMYYDHMCLIFE--PLGPSLYEII 126

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 7/115 (6%)

Query: 112 LLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK 170
           L R++         K      K +    +++++ ++IG+G  G V    L +  ++ A+K
Sbjct: 46  LRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMK 105

Query: 171 ---KSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
              K + +  +    F  E  +L   + + +  L     + +  L LV ++   G
Sbjct: 106 ILNKWEMLKRAETACFREERDVLVNGDSKWITTLH-YAFQDDNNLYLVMDYY-VG 158

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN 194
           + +++ R IG G  G ++ G  +     VA+K      ++   Q + E  I   + 
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV--KTKHPQLLYESKIYRILQ 60

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 39.7 bits (93), Expect = 4e-04
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 8/74 (10%)

Query: 132 SKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEV 187
              +   +D Y   + IG G  G            +VAVK   +  ++ E NV++   E+
Sbjct: 12  DMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDE-NVQR---EI 67

Query: 188 VILSQINHRNVVKL 201
           +    + H N+V+ 
Sbjct: 68  INHRSLRHPNIVRF 81

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
           + ++  R++G+GG G V    +   G++ A K   K +          +NE  IL ++N 
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243

Query: 196 RNVVKLLGCCLETEVPL-LVYEFILNG 221
           R VV  L    ET+  L LV   + NG
Sbjct: 244 RFVVS-LAYAYETKDALCLVLTLM-NG 268

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSV--HESNVEQFINEVVILSQINH 195
              Y+  + +G G  G V   +    G  VA+KK       E   ++   E+ +L  + H
Sbjct: 24  RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH 83

Query: 196 RNVVKLL 202
            NV+ LL
Sbjct: 84  ENVIGLL 90

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVE--QFINEVVILSQINH 195
            + Y+    +G G  G+V     T  G  VAVKK     +S +   +   E+ +L  + H
Sbjct: 28  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87

Query: 196 RNVVKLL 202
            NV+ LL
Sbjct: 88  ENVIGLL 94

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 20/94 (21%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHR---- 196
           Y+V ++IG+G  G V K       + VA+K  ++  +    Q   E+ IL  +  +    
Sbjct: 99  YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN-EKRFHRQAAEEIRILEHLRKQDKDN 157

Query: 197 --NVVKLLGC-------CLETEVPLL---VYEFI 218
             NV+ +L         C+  E  LL   +YE I
Sbjct: 158 TMNVIHMLENFTFRNHICMTFE--LLSMNLYELI 189

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 37.7 bits (88), Expect = 6e-04
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 5/38 (13%)

Query: 19 TDIDECLDKEKYHCE--GKCKNTIGSYTCDCPIGMYGD 54
           D D+C       C+  GKCK+ +G YTC C  G  G 
Sbjct: 40 KDGDQCETSP---CQNQGKCKDGLGEYTCTCLEGFEGK 74

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 37.7 bits (88), Expect = 7e-04
 Identities = 6/36 (16%), Positives = 9/36 (25%)

Query: 19  TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
               +    +   C+  C     S  C C  G    
Sbjct: 78  LFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLA 113

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 7/115 (6%)

Query: 112 LLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK-GMLTDGRIVAVK 170
           L + +   N  +  K  +   +DL    ++Y+V ++IG+G  G V      +  ++ A+K
Sbjct: 41  LRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK 100

Query: 171 ---KSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
              K + +  S+   F  E  I++  N   VV+L     + +  L +V E++  G
Sbjct: 101 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYM-PG 153

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 4/68 (5%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSV--HESNVEQFINEVVILSQIN- 194
              Y++ + +G+G  G V+K +    G +VAVKK      + ++ ++   E++IL++++ 
Sbjct: 8   LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67

Query: 195 HRNVVKLL 202
           H N+V LL
Sbjct: 68  HENIVNLL 75

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 38.9 bits (91), Expect = 7e-04
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 20/100 (20%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN 194
           EK  D Y++  +IG+G  G V K     +   VA+K  K+  ++ + Q   EV +L  +N
Sbjct: 50  EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN-KKAFLNQAQIEVRLLELMN 108

Query: 195 HR------NVVKLLGC-------CLETEVPLL---VYEFI 218
                    +V L          CL  E  +L   +Y+ +
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFE--MLSYNLYDLL 146

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* Length = 195

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
           D D+C        +GKCK+ +G YTC C  G  G 
Sbjct: 40 KDGDQCETSP-CQNQGKCKDGLGEYTCTCLEGFEGK 74

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A Length = 285

 Score = 38.6 bits (89), Expect = 7e-04
 Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)

Query: 20 DIDEC-LDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCRGFRIITIVAGCV 72
              C  ++ +     +C++    + C C     G+G+  C        V G V
Sbjct: 4  AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQ-CVAEGSPQRVNGKV 56

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 12/70 (17%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEVVILSQ-I 193
           TD Y+V   IG G      + +        AVK   KSK            E+ IL +  
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRYG 73

Query: 194 NHRNVVKLLG 203
            H N++ L  
Sbjct: 74  QHPNIITLKD 83

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 39.0 bits (91), Expect = 8e-04
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
           D +   R++G+GG G VF   +   G++ A K   K +       +  + E  IL++++ 
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244

Query: 196 RNVVKLLGCCLETEVPL-LVYEFILNG 221
           R +V L     ET+  L LV   + NG
Sbjct: 245 RFIVSLA-YAFETKTDLCLVMTIM-NG 269

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 37.4 bits (87), Expect = 8e-04
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 5/38 (13%)

Query: 19  TDIDECLDKEKYHCE--GKCKNTIGSYTCDCPIGMYGD 54
            +I+EC  +    C+  G C + + +Y+C+CP    G 
Sbjct: 95  HNINECEVEP---CKNGGICTDLVANYSCECPGEFMGR 129

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 38.8 bits (91), Expect = 8e-04
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 21/95 (22%)

Query: 142 YKVSRIIGQGGQGTVFKG--MLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHR--- 196
           Y++   +G+G  G V +       GR VAVK  K+V +   E   +E+ +L  +N     
Sbjct: 16  YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPN 74

Query: 197 ---NVVKLLGC-------CLETEVPLL---VYEFI 218
                V++L         C+  E  LL    Y+FI
Sbjct: 75  STFRCVQMLEWFEHHGHICIVFE--LLGLSTYDFI 107

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 38.5 bits (90), Expect = 9e-04
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN 194
           + Y++ R IG G  G ++ G  +  G  VA+K      ++   Q   E  I   + 
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECV--KTKHPQLHIESKIYKMMQ 62

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	221
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.82
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.81
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.81
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.76
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.74
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.73
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.73
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.72
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.69
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.68
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.68
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.67
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.65
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.63
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.63
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.6
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.59
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.56
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.55
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.54
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.53
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.53
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.51
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.51
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.51
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.51
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.5
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.5
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.5
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.49
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.49
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.49
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.48
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.48
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.48
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.48
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.47
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.47
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.47
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.47
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.47
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.47
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.46
3uqc_A	286	Probable conserved transmembrane protein; structur	99.45
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.45
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.45
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.45
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.44
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.44
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.44
3niz_A	311	Rhodanese family protein; structural genomics, str	99.44
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.44
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.43
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.43
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.43
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.43
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.43
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.43
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.43
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.43
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.43
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.42
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.42
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.42
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.42
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.42
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.42
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.42
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.42
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.41
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.41
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.41
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.41
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.41
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.41
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.41
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.4
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.4
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.4
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.4
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.4
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.39
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.39
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.39
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.39
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.38
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.38
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.38
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.38
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.38
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.38
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.38
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.38
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.38
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.37
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.37
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.37
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.37
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.37
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.37
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.37
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.36
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.36
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.36
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.36
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.36
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.36
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.36
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.36
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.36
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.35
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.35
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.35
3bhy_A	283	Death-associated protein kinase 3; death associate	99.35
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.35
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.35
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.35
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.35
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.35
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.34
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.34
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.34
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.34
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.34
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.34
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.34
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.34
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.34
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.34
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.33
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.33
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.33
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.33
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.33
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.33
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.33
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.33
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.33
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.33
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.33
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.33
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.32
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.32
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.32
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.32
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.32
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.32
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.31
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.31
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.31
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.31
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.31
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.31
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.3
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.3
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.3
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.3
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.3
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.3
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.29
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.29
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.29
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.29
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.29
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.29
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.28
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.28
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.28
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.28
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.28
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.28
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.28
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.28
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.27
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.27
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.27
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.27
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.27
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.27
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.27
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.27
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.27
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.26
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.26
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.26
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.26
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.26
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.26
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.26
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.26
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.25
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.25
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.25
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.25
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.25
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.25
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.24
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.24
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.23
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.23
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.22
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.22
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.22
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.22
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.22
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.22
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.21
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.21
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.2
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.2
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.19
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.19
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.19
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.18
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.18
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.18
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.17
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.16
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.16
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.15
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.15
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.14
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.13
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.13
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.13
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.12
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.12
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.12
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.1
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.09
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.09
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.08
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.07
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.07
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.06
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.06
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.05
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.01
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.98
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.97
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.97
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.95
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.94
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.94
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.9
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.89
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.89
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.89
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.83
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.54
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.54
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.51
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.47
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.35
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.33
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	98.18
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.18
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.12
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.1
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	97.97
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.94
2bou_A	143	EGF-like module containing mucin-like hormone rece	97.87
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.78
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.78
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	97.74
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	97.72
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	97.64
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	97.58
2bou_A	143	EGF-like module containing mucin-like hormone rece	97.58
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	97.57
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	97.56
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	97.52
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.51
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.49
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.47
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.43
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	97.36
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.33
1aut_L	114	Activated protein C; serine proteinase, plasma cal	97.31
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	97.31
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	97.31
2vh0_B	134	Activated factor XA light chain; serine protease,	97.26
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.14
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.13
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	97.1
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.07
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.0
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	96.99
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	96.96
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	96.91
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	96.9
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	96.79
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	96.79
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	96.76
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	96.74
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	96.69
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	96.69
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	96.69
1nzi_A	159	Complement C1S component; calcium, innate immunity	96.68
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	96.65
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.62
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	96.51
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	96.41
1szb_A	170	Mannose binding lectin-associated serine protease-	96.4
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	96.39
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	96.34
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	96.32
2wph_E	59	Coagulation factor IXA light chain; serine proteas	96.31
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.2
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	95.82
1aut_L	114	Activated protein C; serine proteinase, plasma cal	95.76
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	95.7
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	95.65
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	95.63
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	95.58
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	95.58
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	95.58
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	95.41
3v65_B	386	Low-density lipoprotein receptor-related protein;	95.36
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	95.34
2vh0_B	134	Activated factor XA light chain; serine protease,	95.3
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	95.11
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	94.95
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	94.83
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	94.41
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	94.01
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	93.92
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	93.79
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	93.42
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	93.37
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	93.31
2knc_B	79	Integrin beta-3; transmembrane signaling, protein	93.04
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	93.01
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	93.01
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	91.63
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	91.51
3ats_A	357	Putative uncharacterized protein; hypothetical pro	91.26
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	91.24
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	90.82
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	90.77
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	90.67
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	90.6
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	90.15
3oja_A	487	Leucine-rich immune molecule 1; coiled-coil, helix	89.32
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	89.13
1ob1_C	99	Major merozoite surface protein; immune system, im	88.16
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	88.05
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	87.83
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	87.54
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	86.61
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	85.27
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	83.89
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	83.08
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	82.65
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	81.75
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	81.26

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.82  E-value=2.9e-20  Score=143.05  Aligned_cols=85  Identities=29%  Similarity=0.553  Sum_probs=74.2

Q ss_pred             hhccCccccceecccCceEEEEEEeC------CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      +.+++|.+.+.||+|+||.||+|.+.      ++..||||.++..+....++|.+|+.+|++++|||||+++|++...++
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~   89 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP   89 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence            45677888999999999999999863      367899999987777777889999999999999999999999999999


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+||||||++|
T Consensus        90 ~~lV~Ey~~~G  100 (299)
T 4asz_A           90 LIMVFEYMKHG  100 (299)
T ss_dssp             EEEEEECCTTC
T ss_pred             EEEEEEcCCCC
Confidence            99999999987

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.81  E-value=5.4e-20  Score=143.36  Aligned_cols=86  Identities=29%  Similarity=0.519  Sum_probs=76.8

Q ss_pred             hhhccCccccceecccCceEEEEEEeC------CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      .+.++++.+.+.||+|+||.||+|.+.      ++..||||.++..+....++|.+|+.+|++++|||||+++|++...+
T Consensus        37 ~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~  116 (329)
T 4aoj_A           37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR  116 (329)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             ccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            345577888999999999999999864      36789999998877777789999999999999999999999999999


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      +.+||||||++|
T Consensus       117 ~~~lV~Ey~~~G  128 (329)
T 4aoj_A          117 PLLMVFEYMRHG  128 (329)
T ss_dssp             SEEEEEECCTTC
T ss_pred             EEEEEEEcCCCC
Confidence            999999999987

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.81  E-value=7.3e-20  Score=141.37  Aligned_cols=85  Identities=25%  Similarity=0.414  Sum_probs=72.7

Q ss_pred             hhccCccccceecccCceEEEEEEeC------CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      ++.+++.+.+.||+|+||.||+|.+.      ++..||||.++. ......++|.+|+.+|++++|||||+|+|++...+
T Consensus        23 i~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  102 (308)
T 4gt4_A           23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ  102 (308)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence            34456777899999999999999862      457899999976 34445678999999999999999999999999999


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      +.+||||||++|
T Consensus       103 ~~~lV~Ey~~~G  114 (308)
T 4gt4_A          103 PLSMIFSYCSHG  114 (308)
T ss_dssp             SCEEEEECCSSC
T ss_pred             EEEEEEEcCCCC
Confidence            999999999987

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.76  E-value=1.5e-18  Score=133.77  Aligned_cols=86  Identities=28%  Similarity=0.355  Sum_probs=74.3

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ..|+++.+++.+.+.||+|+||.||+|.+..  .||||.++.  .+....+.|.+|+.+|++++|||||+++|++.. +.
T Consensus        29 ~~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~  105 (307)
T 3omv_A           29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DN  105 (307)
T ss_dssp             CCCBCCTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS
T ss_pred             cCcEEcHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-Ce
Confidence            4578888999999999999999999999743  599999875  344456789999999999999999999998754 56


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      ++||||||++|
T Consensus       106 ~~iVmEy~~gG  116 (307)
T 3omv_A          106 LAIVTQWCEGS  116 (307)
T ss_dssp             CEEEEECCSSC
T ss_pred             EEEEEEcCCCC
Confidence            89999999987

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.74  E-value=4.3e-18  Score=133.76  Aligned_cols=93  Identities=31%  Similarity=0.459  Sum_probs=78.5

Q ss_pred             eechhhhhhhccCccccceecccCceEEEEEEeCC------CcEEEEEeccC-CCcccHHHHHHHHHHHHcCC-CCceee
Q 036177          129 LFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD------GRIVAVKKSKS-VHESNVEQFINEVVILSQIN-HRNVVK  200 (221)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~------~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~-h~niv~  200 (221)
                      .++.++|++++++|++.+.||+|+||.||+|.+..      ++.||||.++. ......++|.+|+.+|.+++ |||||+
T Consensus        53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~  132 (353)
T 4ase_A           53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN  132 (353)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence            35567899999999999999999999999998532      35799999876 34445678999999999995 599999


Q ss_pred             eeeEEEeC-CeeEEEEEcccCC
Q 036177          201 LLGCCLET-EVPLLVYEFILNG  221 (221)
Q Consensus       201 l~g~~~~~-~~~~lv~e~~~~G  221 (221)
                      |+|++... ++++||||||++|
T Consensus       133 l~g~~~~~~~~~~iV~Ey~~~G  154 (353)
T 4ase_A          133 LLGACTKPGGPLMVIVEFCKFG  154 (353)
T ss_dssp             EEEEECCTTSCCEEEEECCTTE
T ss_pred             EEEEEEecCCEEEEEEEcCCCC
Confidence            99999764 5789999999987

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.73  E-value=5.6e-18  Score=132.29  Aligned_cols=83  Identities=31%  Similarity=0.451  Sum_probs=74.1

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      .+.|...+.||+|+||.||++.. .+|+.||+|.++.......+.+.+|+.+|++++|||||++++++...+.+||||||
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  152 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  152 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            45688889999999999999995 46899999998765555567799999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus       153 ~~gg  156 (346)
T 4fih_A          153 LEGG  156 (346)
T ss_dssp             CTTE
T ss_pred             CCCC
Confidence            9986

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.73  E-value=8.4e-18  Score=131.48  Aligned_cols=82  Identities=23%  Similarity=0.350  Sum_probs=67.3

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++|.+.+.||+|+||.||++.. .+++.||+|.++.  ......+.|.+|+.+|++++|||||++++++...+.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5788899999999999999984 5689999999864  344456789999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus       104 y~~gg  108 (350)
T 4b9d_A          104 YCEGG  108 (350)
T ss_dssp             CCTTC
T ss_pred             CCCCC
Confidence            99987

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.72  E-value=1.3e-17  Score=133.44  Aligned_cols=84  Identities=31%  Similarity=0.447  Sum_probs=75.3

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +.+.|...+.||+|+||.||++.. .+|+.||||.++.......+.+.+|+.+|++++|||||++++++...+.+|||||
T Consensus       149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE  228 (423)
T 4fie_A          149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME  228 (423)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence            446688899999999999999995 5689999999876555666789999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      ||++|
T Consensus       229 y~~gG  233 (423)
T 4fie_A          229 FLEGG  233 (423)
T ss_dssp             CCTTE
T ss_pred             CCCCC
Confidence            99986

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.69  E-value=3.1e-17  Score=126.30  Aligned_cols=82  Identities=24%  Similarity=0.349  Sum_probs=72.6

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||+||++.. .+++.||+|.++.   ......+.+.+|+.+|++++|||||++++++.+.+..||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5688899999999999999984 5689999999854   23344677999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus       112 Ey~~gG  117 (311)
T 4aw0_A          112 SYAKNG  117 (311)
T ss_dssp             CCCTTE
T ss_pred             ecCCCC
Confidence            999986

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.68  E-value=9.4e-17  Score=122.79  Aligned_cols=79  Identities=27%  Similarity=0.381  Sum_probs=66.7

Q ss_pred             cccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe----CCeeEEEE
Q 036177          143 KVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLE----TEVPLLVY  215 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~----~~~~~lv~  215 (221)
                      .+.+.||+|+||.||+|.. ..+..||+|.+..  ......+.|.+|+.+|++++|||||++++++..    .+.++|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            5567899999999999985 4588999998864  344556789999999999999999999999865    24579999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      |||++|
T Consensus       109 Ey~~gg  114 (290)
T 3fpq_A          109 ELMTSG  114 (290)
T ss_dssp             ECCCSC
T ss_pred             eCCCCC
Confidence            999987

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.68  E-value=8.5e-17  Score=124.19  Aligned_cols=78  Identities=23%  Similarity=0.349  Sum_probs=63.0

Q ss_pred             cCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHH--HHHHHHcCCCCceeeeeeEEEeCC----eeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFIN--EVVILSQINHRNVVKLLGCCLETE----VPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~--e~~~l~~l~h~niv~l~g~~~~~~----~~~l  213 (221)
                      +++.+.+.||+|+||.||+|.+ +|+.||||.++..   ...++.+  |+..+.+++|||||+++|++...+    .++|
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l   78 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence            3477789999999999999998 6899999998643   2334444  455556889999999999998653    5799


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      |||||++|
T Consensus        79 V~Ey~~~g   86 (303)
T 3hmm_A           79 VSDYHEHG   86 (303)
T ss_dssp             EEECCTTC
T ss_pred             EecCCCCC
Confidence            99999987

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.67  E-value=1.4e-16  Score=122.66  Aligned_cols=82  Identities=22%  Similarity=0.382  Sum_probs=66.8

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC--------
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE--------  209 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~--------  209 (221)
                      ++|++.+.||+|+||.||++.. .++..||+|.++. ......+.+.+|+.+|++++|||||++++++...+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            3577789999999999999985 4689999999864 33444577999999999999999999999986543        


Q ss_pred             ----eeEEEEEcccCC
Q 036177          210 ----VPLLVYEFILNG  221 (221)
Q Consensus       210 ----~~~lv~e~~~~G  221 (221)
                          .++|+|||+++|
T Consensus        85 ~~~~~l~ivmE~~~gg  100 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKE  100 (299)
T ss_dssp             --CEEEEEEEECCCSC
T ss_pred             CCCcEEEEEEecCCCC
Confidence                368999999886

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.65  E-value=3.3e-16  Score=118.82  Aligned_cols=80  Identities=23%  Similarity=0.362  Sum_probs=65.2

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|++.+.||+|+||.||++.. .+++.||+|.++.   ........+.+|+.+|++++|||||+++++....+..+|||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            5688899999999999999984 5689999999854   22334567999999999999999999999999999999999


Q ss_pred             Eccc
Q 036177          216 EFIL  219 (221)
Q Consensus       216 e~~~  219 (221)
                      ||+.
T Consensus        93 Ey~~   96 (275)
T 3hyh_A           93 EYAG   96 (275)
T ss_dssp             ECCC
T ss_pred             eCCC
Confidence            9984

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.63  E-value=1.3e-16  Score=122.67  Aligned_cols=83  Identities=24%  Similarity=0.322  Sum_probs=65.8

Q ss_pred             ccCccccceecccCceEEEEEEe----CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~----~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      .++|++.+.||+|+||.||++..    ..++.||+|.++..  .......+.+|+.+|++++|||||++++++...+..+
T Consensus        23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~  102 (304)
T 3ubd_A           23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY  102 (304)
T ss_dssp             GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred             ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence            36788999999999999999974    23678999998652  2333456899999999999999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      |||||+++|
T Consensus       103 ivmEy~~gg  111 (304)
T 3ubd_A          103 LILDFLRGG  111 (304)
T ss_dssp             EEECCCTTC
T ss_pred             EEEEcCCCC
Confidence            999999987

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.63  E-value=5e-16  Score=120.89  Aligned_cols=78  Identities=22%  Similarity=0.221  Sum_probs=67.8

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      .+.|...+.||+|+||.||++.. .+|..||||.++....     +.+|+.+|++++|||||++++++...+.++|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            35577788999999999999995 4689999999864221     34799999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus       132 ~~gg  135 (336)
T 4g3f_A          132 LEGG  135 (336)
T ss_dssp             CTTC
T ss_pred             cCCC
Confidence            9987

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.60  E-value=2.2e-15  Score=125.68  Aligned_cols=82  Identities=27%  Similarity=0.441  Sum_probs=74.4

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      ++|.+.+.||+|+||.||++.. .+|..||+|.++.......+.+.+|+.+|+.++|||||+|++++...+.++|+||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            5688899999999999999984 568999999987666666778999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus       237 ~gg  239 (573)
T 3uto_A          237 SGG  239 (573)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            987

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.59  E-value=2.3e-15  Score=120.14  Aligned_cols=81  Identities=25%  Similarity=0.389  Sum_probs=68.4

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC------Ce
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLET------EV  210 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~~  210 (221)
                      ++|.+.+.||+|+||.||++.. .+|+.||||.++.  ......+.+++|+.+|+.++|||||++++++...      +.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5688999999999999999984 5689999999865  2334456789999999999999999999987542      56


Q ss_pred             eEEEEEcccC
Q 036177          211 PLLVYEFILN  220 (221)
Q Consensus       211 ~~lv~e~~~~  220 (221)
                      +|||||||++
T Consensus       134 ~~ivmE~~~g  143 (398)
T 4b99_A          134 VYVVLDLMES  143 (398)
T ss_dssp             EEEEEECCSE
T ss_pred             EEEEEeCCCC
Confidence            8999999964

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.56  E-value=7.3e-15  Score=114.20  Aligned_cols=92  Identities=37%  Similarity=0.631  Sum_probs=81.6

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      +...++....++|...+.||+|+||.||++...++..||+|.+........+.|.+|+.+|+.++||||+++++++...+
T Consensus        29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  108 (321)
T 2qkw_B           29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN  108 (321)
T ss_dssp             -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred             ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence            44456666778999999999999999999998789999999987766666788999999999999999999999999889


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..++||||+++|
T Consensus       109 ~~~lv~e~~~~~  120 (321)
T 2qkw_B          109 EMILIYKYMENG  120 (321)
T ss_dssp             CCEEEEECCTTC
T ss_pred             eEEEEEEcCCCC
Confidence            999999999875

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.55  E-value=7.5e-15  Score=116.71  Aligned_cols=91  Identities=30%  Similarity=0.532  Sum_probs=79.0

Q ss_pred             chhhhhhhccCccccceecccCceEEEEEEeC-CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       131 ~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      ..+.|....++|.+.+.||+|+||.||+|.+. ++..||+|.++.. .......|.+|+.+|++++||||++++|++...
T Consensus       105 ~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  184 (377)
T 3cbl_A          105 PKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK  184 (377)
T ss_dssp             CCCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             cccccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC
Confidence            34567778888999999999999999999974 6889999998753 334456799999999999999999999999988


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      +..++||||+++|
T Consensus       185 ~~~~lv~e~~~~g  197 (377)
T 3cbl_A          185 QPIYIVMELVQGG  197 (377)
T ss_dssp             SSCEEEEECCTTC
T ss_pred             CCcEEEEEcCCCC
Confidence            8999999999876

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.54  E-value=2.3e-14  Score=116.66  Aligned_cols=90  Identities=26%  Similarity=0.417  Sum_probs=79.5

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      +..+.|+++.++|.+.+.||+|+||.||+|.+..+..||+|.++... ...+.|++|+.+|++++||||+++++++. .+
T Consensus       178 ~~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~  255 (454)
T 1qcf_A          178 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KE  255 (454)
T ss_dssp             CCTTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred             ccccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CC
Confidence            44567888899999999999999999999998788899999997643 34678999999999999999999999986 66


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..++||||+++|
T Consensus       256 ~~~lv~e~~~~g  267 (454)
T 1qcf_A          256 PIYIITEFMAKG  267 (454)
T ss_dssp             SCEEEECCCTTC
T ss_pred             ccEEEEeecCCC
Confidence            789999999876

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.53  E-value=2.7e-14  Score=110.57  Aligned_cols=91  Identities=27%  Similarity=0.460  Sum_probs=76.4

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEe
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLE  207 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  207 (221)
                      ...+++..+.++|.+.+.||+|+||.||++.. .+..||+|.+...  .....+.|.+|+.+|++++||||+++++++..
T Consensus        27 ~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  105 (309)
T 3p86_A           27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ  105 (309)
T ss_dssp             -----CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CCcccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE
Confidence            44566777888899999999999999999987 6889999998653  33445689999999999999999999999998


Q ss_pred             CCeeEEEEEcccCC
Q 036177          208 TEVPLLVYEFILNG  221 (221)
Q Consensus       208 ~~~~~lv~e~~~~G  221 (221)
                      .+..++||||+++|
T Consensus       106 ~~~~~lv~e~~~~~  119 (309)
T 3p86_A          106 PPNLSIVTEYLSRG  119 (309)
T ss_dssp             TTCCEEEEECCTTC
T ss_pred             CCceEEEEecCCCC
Confidence            88999999999876

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.53  E-value=1.4e-14  Score=112.77  Aligned_cols=96  Identities=41%  Similarity=0.713  Sum_probs=82.8

Q ss_pred             ceeeechhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCC-cccHHHHHHHHHHHHcCCCCceeeeeeE
Q 036177          126 KTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVVKLLGC  204 (221)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~  204 (221)
                      ....++..++....++|...+.||+|+||.||++...++..||+|.++... ......|.+|+.+++.++||||++++++
T Consensus        16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   95 (326)
T 3uim_A           16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF   95 (326)
T ss_dssp             CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred             ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence            445678889999999999999999999999999997788999999987532 2333469999999999999999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +...+..++||||+++|
T Consensus        96 ~~~~~~~~lv~e~~~~~  112 (326)
T 3uim_A           96 CMTPTERLLVYPYMANG  112 (326)
T ss_dssp             ECCSSCCEEEEECCTTC
T ss_pred             EecCCceEEEEEeccCC
Confidence            99999999999999875

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.51  E-value=5.1e-14  Score=108.85  Aligned_cols=83  Identities=22%  Similarity=0.417  Sum_probs=74.6

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      .++|...+.||+|+||.||++.. .++..||+|.+...+....+.|.+|+.+|++++||||+++++++...+..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            45677789999999999999995 45889999998776667778899999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        89 ~~~~   92 (310)
T 3s95_A           89 IKGG   92 (310)
T ss_dssp             CTTC
T ss_pred             cCCC
Confidence            9875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.51  E-value=5.5e-14  Score=114.24  Aligned_cols=87  Identities=30%  Similarity=0.470  Sum_probs=76.0

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC-e
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETE-V  210 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~-~  210 (221)
                      ...|++..++|.+.+.||+|+||.||++.+ .+..||||.++...  ..+.|.+|+.+|++++||||+++++++...+ .
T Consensus       185 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  261 (450)
T 1k9a_A          185 RSGWALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG  261 (450)
T ss_dssp             HTTCBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSC
T ss_pred             ccccccChHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCc
Confidence            355677788899999999999999999998 57899999997643  4568999999999999999999999987765 7


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++||||+++|
T Consensus       262 ~~iv~e~~~~g  272 (450)
T 1k9a_A          262 LYIVTEYMAKG  272 (450)
T ss_dssp             EEEEEECCTTC
T ss_pred             eEEEEEecCCC
Confidence            89999999876

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.51  E-value=4.1e-14  Score=115.08  Aligned_cols=89  Identities=25%  Similarity=0.409  Sum_probs=77.7

Q ss_pred             chhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       131 ~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ..+.|+++.++|.+.+.||+|+||.||+|.+..+..||+|.++... ...+.|.+|+.+|++++||||+++++++.. +.
T Consensus       175 ~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~  252 (452)
T 1fmk_A          175 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP  252 (452)
T ss_dssp             STTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             CccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cc
Confidence            3466788889999999999999999999998777889999997643 335789999999999999999999999865 67


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++||||+++|
T Consensus       253 ~~iv~e~~~~g  263 (452)
T 1fmk_A          253 IYIVTEYMSKG  263 (452)
T ss_dssp             CEEEECCCTTC
T ss_pred             eEEEehhhcCC
Confidence            89999999876

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.51  E-value=7.4e-14  Score=105.77  Aligned_cols=87  Identities=29%  Similarity=0.459  Sum_probs=75.6

Q ss_pred             hhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       134 ~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      .|.+..++|.+.+.||+|+||.||++...++..||+|.+..... ..+.|.+|+.++++++||||+++++++...+..++
T Consensus         4 ~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (269)
T 4hcu_A            4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL   82 (269)
T ss_dssp             -CBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             cEEeChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEE
Confidence            35566678888999999999999999987888999999876333 34679999999999999999999999998889999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      +|||+++|
T Consensus        83 v~e~~~~~   90 (269)
T 4hcu_A           83 VFEFMEHG   90 (269)
T ss_dssp             EEECCTTC
T ss_pred             EEEeCCCC
Confidence            99999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.50  E-value=2.8e-14  Score=117.26  Aligned_cols=89  Identities=29%  Similarity=0.517  Sum_probs=78.4

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEeCC-CcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~-~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      .+.|+....+|.+.+.||+|+||.||+|.+.. +..||+|.++... ...++|.+|+.+|++++||||+++++++...+.
T Consensus       212 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~  290 (495)
T 1opk_A          212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP  290 (495)
T ss_dssp             SSCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ccccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence            45677778889999999999999999999754 7889999987643 346789999999999999999999999999899


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+|||||+++|
T Consensus       291 ~~lv~E~~~~g  301 (495)
T 1opk_A          291 FYIITEFMTYG  301 (495)
T ss_dssp             CEEEEECCTTC
T ss_pred             EEEEEEccCCC
Confidence            99999999876

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.50  E-value=1.2e-13  Score=106.36  Aligned_cols=84  Identities=27%  Similarity=0.479  Sum_probs=74.2

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ..++|...+.||+|+||.||++.. .++..||+|.+........+.+.+|+.+|+.++||||+++++++...+..++|||
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            345688899999999999999984 5688999999876555556789999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        98 ~~~~~  102 (297)
T 3fxz_A           98 YLAGG  102 (297)
T ss_dssp             CCTTC
T ss_pred             CCCCC
Confidence            99876

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.50  E-value=1.1e-13  Score=107.62  Aligned_cols=80  Identities=33%  Similarity=0.404  Sum_probs=71.9

Q ss_pred             ccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +...+.||+|+||.||++... +|..||+|.++.......+.+.+|+.+|++++||||+++++++...+..++||||+++
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  126 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG  126 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence            556678999999999999964 6899999998776666678899999999999999999999999999999999999987


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus       127 ~  127 (321)
T 2c30_A          127 G  127 (321)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.49  E-value=5.1e-14  Score=116.78  Aligned_cols=89  Identities=25%  Similarity=0.409  Sum_probs=77.5

Q ss_pred             chhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       131 ~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ..+.|++..++|.+.+.||+|+||.||++.+..+..||||.++... ...++|++|+.+|++++||||+++++++.. +.
T Consensus       258 ~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~  335 (535)
T 2h8h_A          258 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP  335 (535)
T ss_dssp             STTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             CccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-cc
Confidence            3566788888999999999999999999998777889999997644 335789999999999999999999999865 67


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+|||||+++|
T Consensus       336 ~~lv~e~~~~g  346 (535)
T 2h8h_A          336 IYIVTEYMSKG  346 (535)
T ss_dssp             CEEEECCCTTE
T ss_pred             ceEeeehhcCC
Confidence            89999999875

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.49  E-value=6.3e-14  Score=109.19  Aligned_cols=85  Identities=29%  Similarity=0.511  Sum_probs=72.9

Q ss_pred             hhccCccccceecccCceEEEEEEeC----CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGMLT----DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~~----~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      ...++|.+.+.||+|+||.||++...    .+..||+|.++.. .....+.|.+|+.+|++++||||+++++++...+..
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  125 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA  125 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence            44567888999999999999999963    3456999998763 445567899999999999999999999999888899


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus       126 ~lv~e~~~~~  135 (325)
T 3kul_A          126 MIVTEYMENG  135 (325)
T ss_dssp             EEEEECCTTC
T ss_pred             EEEeeCCCCC
Confidence            9999999875

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.49  E-value=8.6e-14  Score=106.11  Aligned_cols=89  Identities=24%  Similarity=0.394  Sum_probs=75.4

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      ...|....++|.+.+.||+|+||.||++...++..||+|.++.... ..++|.+|+.++.+++||||+++++++...+..
T Consensus        16 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   94 (283)
T 3gen_A           16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPI   94 (283)
T ss_dssp             CCTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred             CCCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCe
Confidence            4566777888999999999999999999988888999999876433 346799999999999999999999999888899


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus        95 ~lv~e~~~~~  104 (283)
T 3gen_A           95 FIITEYMANG  104 (283)
T ss_dssp             EEEECCCTTC
T ss_pred             EEEEeccCCC
Confidence            9999999875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.48  E-value=1.3e-13  Score=104.27  Aligned_cols=86  Identities=27%  Similarity=0.392  Sum_probs=75.1

Q ss_pred             hhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      ++...++|.+.+.||+|+||.||++...++..||+|.++.... ..+++.+|+.++.+++||||+++++++...+..++|
T Consensus         3 ~~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (268)
T 3sxs_A            3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV   81 (268)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred             eEechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEE
Confidence            4456677888999999999999999988888899999876433 346799999999999999999999999888899999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        82 ~e~~~~~   88 (268)
T 3sxs_A           82 TEYISNG   88 (268)
T ss_dssp             EECCTTC
T ss_pred             EEccCCC
Confidence            9999875

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.48  E-value=1.2e-13  Score=107.84  Aligned_cols=83  Identities=28%  Similarity=0.450  Sum_probs=73.0

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.+..  ......+.+.+|+.+|+.++||||+++++++...+..++||
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            46788899999999999999985 5789999999864  34445677999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        94 e~~~~~   99 (328)
T 3fe3_A           94 EYASGG   99 (328)
T ss_dssp             CCCTTC
T ss_pred             ECCCCC
Confidence            999876

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.48  E-value=9e-14  Score=110.23  Aligned_cols=87  Identities=25%  Similarity=0.471  Sum_probs=74.2

Q ss_pred             hhhhccCccccceecccCceEEEEEEe--------CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeeeeeE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGML--------TDGRIVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKLLGC  204 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~--------~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~  204 (221)
                      +....++|.+.+.||+|+||.||++..        ..+..||+|.++.. .....+.|.+|+.+|+.+ +||||++++++
T Consensus        76 ~~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~  155 (370)
T 2psq_A           76 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA  155 (370)
T ss_dssp             TBCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEE
T ss_pred             ccccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            455667889999999999999999984        23457999998753 344567899999999999 89999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +...+..++||||+++|
T Consensus       156 ~~~~~~~~lv~e~~~~g  172 (370)
T 2psq_A          156 CTQDGPLYVIVEYASKG  172 (370)
T ss_dssp             ECSSSSCEEEEECCTTC
T ss_pred             EccCCCEEEEEEcCCCC
Confidence            99999999999999876

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.48  E-value=5.8e-14  Score=111.45  Aligned_cols=85  Identities=28%  Similarity=0.495  Sum_probs=72.7

Q ss_pred             hhccCccccceecccCceEEEEEEeC----CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGMLT----DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~~----~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      ...++|.+.+.||+|+||.||+|...    .+..||+|.++.. .....+.|.+|+.+|++++||||+++++++...+..
T Consensus        42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  121 (373)
T 2qol_A           42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV  121 (373)
T ss_dssp             CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence            34567888999999999999999853    4677999998753 444567899999999999999999999999988899


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus       122 ~lv~e~~~~~  131 (373)
T 2qol_A          122 MIVTEYMENG  131 (373)
T ss_dssp             EEEEECCTTC
T ss_pred             EEEEeCCCCC
Confidence            9999999876

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.47  E-value=5.3e-14  Score=113.78  Aligned_cols=90  Identities=18%  Similarity=0.297  Sum_probs=76.0

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEeC-CCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEe
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLE  207 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  207 (221)
                      ..++....++|.+.+.||+|+||.||++... .+..+|+|.++..   .......+.+|..+|..++||||+++++++..
T Consensus        66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  145 (437)
T 4aw2_A           66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD  145 (437)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            4556677788999999999999999999964 4788999988541   22223458999999999999999999999999


Q ss_pred             CCeeEEEEEcccCC
Q 036177          208 TEVPLLVYEFILNG  221 (221)
Q Consensus       208 ~~~~~lv~e~~~~G  221 (221)
                      .+..+|||||+++|
T Consensus       146 ~~~~~lV~Ey~~gg  159 (437)
T 4aw2_A          146 DNNLYLVMDYYVGG  159 (437)
T ss_dssp             SSEEEEEECCCTTC
T ss_pred             CCEEEEEEecCCCC
Confidence            99999999999886

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.47  E-value=1.7e-13  Score=108.05  Aligned_cols=81  Identities=15%  Similarity=0.261  Sum_probs=69.2

Q ss_pred             ccCccccceecccCceEEEEEEe----CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~----~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  213 (221)
                      .+.|.+.+.||+|+||.||++..    ..+..||+|.+....  ....+.+|+.+|..+ +|||||+++.++...+..+|
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l   97 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI   97 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence            46688999999999999999974    236789999886532  345688999999998 79999999999999999999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ||||+++|
T Consensus        98 vmE~~~g~  105 (361)
T 4f9c_A           98 AMPYLEHE  105 (361)
T ss_dssp             EEECCCCC
T ss_pred             EEeCCCcc
Confidence            99999876

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.47  E-value=8.8e-14  Score=107.99  Aligned_cols=94  Identities=27%  Similarity=0.499  Sum_probs=80.1

Q ss_pred             eeechhhhhhhccCccccceecccCceEEEEEEeC------CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceee
Q 036177          128 KLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVK  200 (221)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~  200 (221)
                      ..+..++|+...++|.+.+.||+|+||.||++...      .+..||+|.+.. ........|.+|+.+|+.++||||++
T Consensus        13 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   92 (322)
T 1p4o_A           13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR   92 (322)
T ss_dssp             SCCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCC
T ss_pred             cccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEee
Confidence            34556788888899999999999999999999753      367899999875 33344567999999999999999999


Q ss_pred             eeeEEEeCCeeEEEEEcccCC
Q 036177          201 LLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       201 l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +++++...+..++||||+++|
T Consensus        93 ~~~~~~~~~~~~lv~e~~~~~  113 (322)
T 1p4o_A           93 LLGVVSQGQPTLVIMELMTRG  113 (322)
T ss_dssp             EEEEECSSSSCEEEEECCTTC
T ss_pred             eEEEEccCCccEEEEEeCCCC
Confidence            999998888999999999875

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.47  E-value=1.2e-13  Score=106.76  Aligned_cols=92  Identities=29%  Similarity=0.463  Sum_probs=77.8

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEe------CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeee
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLL  202 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~------~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~  202 (221)
                      .....+....++|.+.+.||+|+||.||++..      .++..||+|.++. ......+.+.+|+.+|++++||||++++
T Consensus        13 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~   92 (314)
T 2ivs_A           13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLY   92 (314)
T ss_dssp             -CCTTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             cCCcccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEE
Confidence            34456677788899999999999999999984      2347899999875 3445567899999999999999999999


Q ss_pred             eEEEeCCeeEEEEEcccCC
Q 036177          203 GCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       203 g~~~~~~~~~lv~e~~~~G  221 (221)
                      +++...+..+++|||+++|
T Consensus        93 ~~~~~~~~~~lv~e~~~~~  111 (314)
T 2ivs_A           93 GACSQDGPLLLIVEYAKYG  111 (314)
T ss_dssp             EEECSSSSCEEEEECCTTC
T ss_pred             EEEecCCceEEEEeecCCC
Confidence            9999888999999999865

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.47  E-value=8.1e-14  Score=109.80  Aligned_cols=93  Identities=31%  Similarity=0.471  Sum_probs=78.0

Q ss_pred             eechhhhhhhccCccccceecccCceEEEEEEe------CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceee
Q 036177          129 LFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVK  200 (221)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~------~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~  200 (221)
                      .+....|+.+.++|.+.+.||+|+||.||++.+      .++..||+|.++. ......+.|.+|+.+|.++ +||||++
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            355678888999999999999999999999973      2357899999876 3344456799999999999 8999999


Q ss_pred             eeeEEEeCC-eeEEEEEcccCC
Q 036177          201 LLGCCLETE-VPLLVYEFILNG  221 (221)
Q Consensus       201 l~g~~~~~~-~~~lv~e~~~~G  221 (221)
                      +++++...+ ..+++|||+++|
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g  112 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFG  112 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTE
T ss_pred             eeeeeecCCCceEEEEEecCCC
Confidence            999988754 589999999875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.46  E-value=1.7e-13  Score=107.18  Aligned_cols=89  Identities=30%  Similarity=0.467  Sum_probs=76.4

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeC------CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEE
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCC  205 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~  205 (221)
                      ..+....++|.+.+.||+|+||.||++...      .+..||+|.++.. .....+.|.+|+.+|++++||||+++++++
T Consensus        40 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  119 (343)
T 1luf_A           40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC  119 (343)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            445667788999999999999999999863      3478999998753 344467899999999999999999999999


Q ss_pred             EeCCeeEEEEEcccCC
Q 036177          206 LETEVPLLVYEFILNG  221 (221)
Q Consensus       206 ~~~~~~~lv~e~~~~G  221 (221)
                      ...+..++||||+++|
T Consensus       120 ~~~~~~~lv~e~~~~~  135 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYG  135 (343)
T ss_dssp             CSSSSCEEEEECCTTC
T ss_pred             ccCCceEEEEecCCCC
Confidence            9889999999999875

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.45  E-value=2.9e-13  Score=103.63  Aligned_cols=82  Identities=20%  Similarity=0.245  Sum_probs=71.3

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCC---cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH---ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||.||++... .++.||+|.++...   ....+.|.+|+..+.+++||||+++++++...+..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            56888999999999999999964 48899999987532   233477999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus       111 e~~~g~  116 (286)
T 3uqc_A          111 EWIRGG  116 (286)
T ss_dssp             ECCCEE
T ss_pred             EecCCC
Confidence            999764

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.45  E-value=2.7e-13  Score=105.50  Aligned_cols=70  Identities=27%  Similarity=0.460  Sum_probs=58.3

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      ++|.+.+.||+|+||.||++... ++..||+|.++. ......+.+.+|+.+|++++||||+++++++...+
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   77 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETP   77 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECC
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEec
Confidence            45777899999999999999964 789999999864 34445678999999999999999999999886543

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.45  E-value=3.2e-13  Score=102.76  Aligned_cols=89  Identities=25%  Similarity=0.407  Sum_probs=76.4

Q ss_pred             chhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       131 ~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ..++|+...++|.+.+.||+|+||.||++...++..||+|.++... ...+.|.+|+.+|++++||||+++++++. .+.
T Consensus         4 ~~~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~   81 (279)
T 1qpc_A            4 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEP   81 (279)
T ss_dssp             TTCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred             chhhcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCC
Confidence            3457788888999999999999999999998778899999987533 34578999999999999999999999875 456


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+++|||+++|
T Consensus        82 ~~~v~e~~~~~   92 (279)
T 1qpc_A           82 IYIITEYMENG   92 (279)
T ss_dssp             CEEEEECCTTC
T ss_pred             cEEEEecCCCC
Confidence            89999999875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.45  E-value=2.6e-13  Score=102.45  Aligned_cols=86  Identities=29%  Similarity=0.435  Sum_probs=75.4

Q ss_pred             hhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      |....++|.+.+.||+|+||.||++...++..||+|.++.... ..+.+.+|+.++++++||||+++++++...+..+++
T Consensus         3 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (267)
T 3t9t_A            3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV   81 (267)
T ss_dssp             CBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eEEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEE
Confidence            4556677888999999999999999987888999999876433 346799999999999999999999999988899999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        82 ~e~~~~~   88 (267)
T 3t9t_A           82 TEFMEHG   88 (267)
T ss_dssp             ECCCTTC
T ss_pred             EeCCCCC
Confidence            9999875

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.44  E-value=1.6e-13  Score=115.13  Aligned_cols=83  Identities=18%  Similarity=0.272  Sum_probs=67.2

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHH---HHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFI---NEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~---~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      .++|.+.++||+|+||.||++.. .+|..+|+|.++..   .......+.   .++.+++.++|||||++++++.+.+.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            36799999999999999999984 56899999988531   112222333   446677788999999999999999999


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ||||||+++|
T Consensus       268 ylVmEy~~GG  277 (689)
T 3v5w_A          268 SFILDLMNGG  277 (689)
T ss_dssp             EEEECCCCSC
T ss_pred             EEEEecCCCC
Confidence            9999999987

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.44  E-value=2.2e-13  Score=105.25  Aligned_cols=89  Identities=29%  Similarity=0.459  Sum_probs=76.4

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEe------CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeeeeeE
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKLLGC  204 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~------~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~  204 (221)
                      ..+..+.++|.+.+.||+|+||.||++..      ..+..||+|.++.. .....+.+.+|+.+|.++ +||||++++++
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~   95 (313)
T 1t46_A           16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGA   95 (313)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEE
Confidence            45677788899999999999999999984      24578999998753 334567899999999999 99999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +...+..++||||+++|
T Consensus        96 ~~~~~~~~lv~e~~~~~  112 (313)
T 1t46_A           96 CTIGGPTLVITEYCCYG  112 (313)
T ss_dssp             ECSSSSCEEEEECCTTE
T ss_pred             EecCCCcEEEEecCCCC
Confidence            99999999999999865

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.44  E-value=6.7e-13  Score=102.33  Aligned_cols=93  Identities=33%  Similarity=0.580  Sum_probs=77.9

Q ss_pred             eeechhhhhhhccCcccc------ceecccCceEEEEEEeCCCcEEEEEeccCC----CcccHHHHHHHHHHHHcCCCCc
Q 036177          128 KLFTSKDLEKATDNYKVS------RIIGQGGQGTVFKGMLTDGRIVAVKKSKSV----HESNVEQFINEVVILSQINHRN  197 (221)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~------~~lg~G~fg~v~~~~~~~~~~vavk~~~~~----~~~~~~~~~~e~~~l~~l~h~n  197 (221)
                      ..++..++...+++|...      +.||+|+||.||++.. ++..||+|.+...    .....+.|.+|+.+++.++|||
T Consensus        13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   91 (307)
T 2nru_A           13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN   91 (307)
T ss_dssp             EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred             CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence            456677777777776655      8899999999999987 6889999987542    2334577999999999999999


Q ss_pred             eeeeeeEEEeCCeeEEEEEcccCC
Q 036177          198 VVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       198 iv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      |+++++++...+..+++|||+++|
T Consensus        92 i~~~~~~~~~~~~~~lv~e~~~~~  115 (307)
T 2nru_A           92 LVELLGFSSDGDDLCLVYVYMPNG  115 (307)
T ss_dssp             BCCEEEEECSSSSCEEEEECCTTC
T ss_pred             eEEEEEEEecCCceEEEEEecCCC
Confidence            999999999888999999999875

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.44  E-value=2.5e-13  Score=105.10  Aligned_cols=82  Identities=29%  Similarity=0.503  Sum_probs=70.3

Q ss_pred             ccCccccceecccCceEEEEEEeCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      .++|.+.+.||+|+||.||++...++..||+|.++.  ........+.+|+.+|++++||||+++++++...+..++|||
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            466888999999999999999987899999999864  233335679999999999999999999999998889999999


Q ss_pred             cccC
Q 036177          217 FILN  220 (221)
Q Consensus       217 ~~~~  220 (221)
                      |+++
T Consensus       100 ~~~~  103 (311)
T 3niz_A          100 FMEK  103 (311)
T ss_dssp             CCSE
T ss_pred             CCCC
Confidence            9974

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.44  E-value=1.6e-13  Score=103.76  Aligned_cols=84  Identities=23%  Similarity=0.361  Sum_probs=72.0

Q ss_pred             hhccCccccceecccCceEEEEEEeCCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--CeeE
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPL  212 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~  212 (221)
                      ...++|.+.+.||+|+||.||++.. ++..+|+|.++..  +....+.|.+|+.++++++||||+++++++...  +..+
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   85 (271)
T 3kmu_A            7 IDFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT   85 (271)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred             CCHHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence            3456688899999999999999998 5889999998753  344456799999999999999999999998876  6789


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      ++|||+++|
T Consensus        86 lv~e~~~~~   94 (271)
T 3kmu_A           86 LITHWMPYG   94 (271)
T ss_dssp             EEEECCTTC
T ss_pred             eeecccCCC
Confidence            999999875

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.43  E-value=2.7e-13  Score=107.88  Aligned_cols=90  Identities=27%  Similarity=0.451  Sum_probs=76.4

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEeC--------CCcEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeee
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLT--------DGRIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKL  201 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~--------~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l  201 (221)
                      ...++...++|.+.+.||+|+||.||++...        .+..||+|.++. ........+.+|+.+++.+ +||||+++
T Consensus        61 ~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~  140 (382)
T 3tt0_A           61 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL  140 (382)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CcccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhh
Confidence            3456777888999999999999999999841        235799999875 3444567899999999999 99999999


Q ss_pred             eeEEEeCCeeEEEEEcccCC
Q 036177          202 LGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       202 ~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ++++...+..++||||+++|
T Consensus       141 ~~~~~~~~~~~lv~e~~~~g  160 (382)
T 3tt0_A          141 LGACTQDGPLYVIVEYASKG  160 (382)
T ss_dssp             EEEECSSSSCEEEEECCTTC
T ss_pred             eeeeccCCceEEEEEecCCC
Confidence            99999999999999999875

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.43  E-value=2.9e-13  Score=105.78  Aligned_cols=89  Identities=25%  Similarity=0.480  Sum_probs=75.5

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeC--------CCcEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeee
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLT--------DGRIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLL  202 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~--------~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~  202 (221)
                      ..|....++|.+.+.||+|+||.||++...        .+..||+|.++. ........+.+|+.+|+.+ +||||++++
T Consensus        28 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~  107 (334)
T 2pvf_A           28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL  107 (334)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             ccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEE
Confidence            456677788999999999999999999852        466899999875 3344567899999999999 999999999


Q ss_pred             eEEEeCCeeEEEEEcccCC
Q 036177          203 GCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       203 g~~~~~~~~~lv~e~~~~G  221 (221)
                      +++...+..++||||+++|
T Consensus       108 ~~~~~~~~~~lv~e~~~~~  126 (334)
T 2pvf_A          108 GACTQDGPLYVIVEYASKG  126 (334)
T ss_dssp             EEECSSSCCEEEEECCTTC
T ss_pred             EEEccCCceEEEEECCCCC
Confidence            9999889999999999875

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.43  E-value=2e-13  Score=108.05  Aligned_cols=86  Identities=29%  Similarity=0.512  Sum_probs=73.6

Q ss_pred             hhhccCccccceecccCceEEEEEEeC------CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      ....++|.+.+.||+|+||.||++.+.      .+..||+|.++. ........|.+|+.+|++++||||+++++++...
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~  146 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS  146 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence            455678889999999999999999853      356899999865 3445556799999999999999999999999998


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      ...++||||+++|
T Consensus       147 ~~~~lv~e~~~~g  159 (367)
T 3l9p_A          147 LPRFILLELMAGG  159 (367)
T ss_dssp             SSCEEEEECCTTE
T ss_pred             CCCEEEEEeCCCC
Confidence            8999999999875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.43  E-value=2.9e-13  Score=106.10  Aligned_cols=89  Identities=28%  Similarity=0.484  Sum_probs=74.5

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEe------CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeeeeE
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGC  204 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~------~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~  204 (221)
                      .+++.+.++|.+.+.||+|+||.||++..      ..+..||+|.++. ......+.+.+|+.+|.++ +||||++++++
T Consensus        38 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  117 (344)
T 1rjb_A           38 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGA  117 (344)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cCcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            35777888999999999999999999985      2355799999875 3344557899999999999 99999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +...+..++||||+++|
T Consensus       118 ~~~~~~~~lv~e~~~~g  134 (344)
T 1rjb_A          118 CTLSGPIYLIFEYCCYG  134 (344)
T ss_dssp             ECSSSSCEEEEECCTTC
T ss_pred             EeeCCccEEEEecCCCC
Confidence            99999999999999875

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.43  E-value=1.4e-13  Score=110.39  Aligned_cols=89  Identities=25%  Similarity=0.368  Sum_probs=75.1

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeC-CCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      .++....++|.+.+.||+|+||.||++... ++..+|+|.++.   ........+.+|+.+|+.++||||+++++++...
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            455666788999999999999999999964 578999998854   1222345588999999999999999999999999


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      +..++||||+++|
T Consensus       142 ~~~~lV~E~~~gg  154 (410)
T 3v8s_A          142 RYLYMVMEYMPGG  154 (410)
T ss_dssp             SEEEEEECCCTTE
T ss_pred             CEEEEEEeCCCCC
Confidence            9999999999876

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.43  E-value=4.1e-13  Score=102.59  Aligned_cols=84  Identities=26%  Similarity=0.473  Sum_probs=72.8

Q ss_pred             hccCccccceecccCceEEEEEEeC-CC-------cEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLT-DG-------RIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~-~~-------~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      ..++|.+.+.||+|+||.||++... .+       ..||+|.+........+.|.+|+.+|++++||||+++++++...+
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD   85 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence            3466888999999999999999853 23       469999987766666788999999999999999999999999999


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..++||||+++|
T Consensus        86 ~~~lv~e~~~~~   97 (289)
T 4fvq_A           86 ENILVQEFVKFG   97 (289)
T ss_dssp             CCEEEEECCTTC
T ss_pred             CCEEEEECCCCC
Confidence            999999999875

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.43  E-value=4.9e-13  Score=106.56  Aligned_cols=82  Identities=23%  Similarity=0.393  Sum_probs=73.0

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +.|.+.+.||+|+||.||++.. .++..+|+|.+..........+.+|+.+|+.++||||+++++++......++||||+
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~  130 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  130 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence            5688899999999999999985 468899999987655555678999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus       131 ~gg  133 (387)
T 1kob_A          131 SGG  133 (387)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            876

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.43  E-value=2.8e-13  Score=103.91  Aligned_cols=84  Identities=30%  Similarity=0.493  Sum_probs=72.1

Q ss_pred             hccCccccceecccCceEEEEEEe-----CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--Ce
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-----TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLET--EV  210 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-----~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~  210 (221)
                      ..++|++.+.||+|+||.||++.+     .++..||+|.++.......+.|.+|+.+|++++||||+++++++...  ..
T Consensus         8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   87 (295)
T 3ugc_A            8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN   87 (295)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred             CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence            346688899999999999999985     35788999999876666678899999999999999999999998653  56


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++||||+++|
T Consensus        88 ~~lv~e~~~~~   98 (295)
T 3ugc_A           88 LKLIMEYLPYG   98 (295)
T ss_dssp             CEEEEECCTTC
T ss_pred             eEEEEEeCCCC
Confidence            89999999875

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.43  E-value=3e-13  Score=107.34  Aligned_cols=79  Identities=27%  Similarity=0.389  Sum_probs=65.1

Q ss_pred             cccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          143 KVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       143 ~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ...+.||+|+||.||++.. .++..||+|.++.......+.|.+|+.+|.+++||||+++++++...+..+|||||+++|
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            3356899999999999985 568899999988765566778999999999999999999999999999999999999875

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.42  E-value=6.7e-13  Score=104.85  Aligned_cols=83  Identities=27%  Similarity=0.298  Sum_probs=71.2

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc------ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE------SNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      .+.|.+.+.||+|+||.||++.. .++..+|+|.++....      ...+.+.+|+.+|..++||||+++++++...+..
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            35678899999999999999985 4688999998864221      2357799999999999999999999999999999


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus        91 ~lv~e~~~gg  100 (361)
T 2yab_A           91 VLILELVSGG  100 (361)
T ss_dssp             EEEEECCCSC
T ss_pred             EEEEEcCCCC
Confidence            9999999876

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.42  E-value=6.3e-13  Score=104.60  Aligned_cols=82  Identities=24%  Similarity=0.368  Sum_probs=70.8

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC-----CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-----VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-----~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      +.|.+.+.||+|+||.||++.. .++..||+|.++.     ......+.+.+|+.+|+.++||||+++++++...+..++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            4578889999999999999985 4689999998753     122346789999999999999999999999999999999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ||||+++|
T Consensus       104 v~e~~~g~  111 (351)
T 3c0i_A          104 VFEFMDGA  111 (351)
T ss_dssp             EEECCSSC
T ss_pred             EEeCCCCC
Confidence            99999875

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.42  E-value=5.5e-13  Score=101.34  Aligned_cols=82  Identities=24%  Similarity=0.370  Sum_probs=72.3

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      ++|.+.+.||+|+||.||++... .+..+|+|.+........+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            45778899999999999999853 46789999987655566788999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        89 ~~~   91 (277)
T 3f3z_A           89 TGG   91 (277)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            875

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.42  E-value=3.2e-13  Score=105.79  Aligned_cols=86  Identities=24%  Similarity=0.382  Sum_probs=72.8

Q ss_pred             hhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccC-----CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-----VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-----~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      ....++|.+.+.||+|+||.||++.. .++..+|+|.+..     ......+.+.+|+.+|++++||||+++++++...+
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  101 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ  101 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence            34456788899999999999999985 4678899998753     23455678999999999999999999999999999


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..++||||+++|
T Consensus       102 ~~~lv~e~~~gg  113 (345)
T 3hko_A          102 YICLVMELCHGG  113 (345)
T ss_dssp             EEEEEEECCCSC
T ss_pred             eEEEEEeCCCCC
Confidence            999999999876

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.42  E-value=4.1e-13  Score=104.48  Aligned_cols=82  Identities=27%  Similarity=0.387  Sum_probs=68.4

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|.+.+.||+|+||.||++... ++..||+|.+... .....+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            56888999999999999999854 6889999988542 223346789999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        87 ~~~~   90 (323)
T 3tki_A           87 CSGG   90 (323)
T ss_dssp             CTTE
T ss_pred             CCCC
Confidence            9865

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.42  E-value=4.9e-13  Score=104.66  Aligned_cols=83  Identities=19%  Similarity=0.282  Sum_probs=72.1

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .++|.+.+.||+|+||.||++.. .++..+|+|.++..   .......+.+|+.+|+.++||||+++++++...+..++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            35688899999999999999985 46889999998642   334466789999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        84 ~E~~~gg   90 (337)
T 1o6l_A           84 MEYANGG   90 (337)
T ss_dssp             EECCTTC
T ss_pred             EeCCCCC
Confidence            9999876

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.42  E-value=5.7e-13  Score=106.22  Aligned_cols=86  Identities=21%  Similarity=0.273  Sum_probs=73.9

Q ss_pred             hhhccCccccceeccc--CceEEEEEEeC-CCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          136 EKATDNYKVSRIIGQG--GQGTVFKGMLT-DGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G--~fg~v~~~~~~-~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ....++|.+.+.||+|  +||.||++... ++..||+|.++.  ......+.+.+|+.+|+.++||||+++++++...+.
T Consensus        21 ~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  100 (389)
T 3gni_B           21 LPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE  100 (389)
T ss_dssp             CCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             cCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence            3345678889999999  99999999964 689999999864  233445678899999999999999999999999999


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++||||+++|
T Consensus       101 ~~lv~e~~~~~  111 (389)
T 3gni_B          101 LWVVTSFMAYG  111 (389)
T ss_dssp             EEEEEECCTTC
T ss_pred             EEEEEEccCCC
Confidence            99999999876

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.42  E-value=4.2e-13  Score=106.07  Aligned_cols=83  Identities=25%  Similarity=0.428  Sum_probs=72.1

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.++.  ......+.+.+|+.+|++++||||+++++++...+..++||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            35688899999999999999985 4688999999865  23344567999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus       108 e~~~gg  113 (362)
T 2bdw_A          108 DLVTGG  113 (362)
T ss_dssp             CCCCSC
T ss_pred             ecCCCC
Confidence            999876

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.41  E-value=5.4e-13  Score=101.01  Aligned_cols=84  Identities=30%  Similarity=0.496  Sum_probs=68.0

Q ss_pred             hhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCC----cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVH----ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      ...++|.+.+.||+|+||.||++.. .+..+|+|.++...    ....+.+.+|+.+++.++||||+++++++...+..+
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (271)
T 3dtc_A            4 IDFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLC   82 (271)
T ss_dssp             CCTTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CE
T ss_pred             cchhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceE
Confidence            3456788899999999999999998 58899999876422    233567999999999999999999999999988999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      ++|||+++|
T Consensus        83 lv~e~~~~~   91 (271)
T 3dtc_A           83 LVMEFARGG   91 (271)
T ss_dssp             EEEECCTTE
T ss_pred             EEEEcCCCC
Confidence            999999864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.41  E-value=6.9e-13  Score=101.63  Aligned_cols=81  Identities=30%  Similarity=0.450  Sum_probs=70.2

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.++.  ........+.+|+.+|++++||||+++++++...+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            4577889999999999999995 4588999998864  333445779999999999999999999999999999999999


Q ss_pred             cccC
Q 036177          217 FILN  220 (221)
Q Consensus       217 ~~~~  220 (221)
                      |+++
T Consensus        82 ~~~~   85 (292)
T 3o0g_A           82 FCDQ   85 (292)
T ss_dssp             CCSE
T ss_pred             cCCC
Confidence            9874

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.41  E-value=8.7e-13  Score=102.33  Aligned_cols=83  Identities=31%  Similarity=0.490  Sum_probs=70.2

Q ss_pred             ccCccccceecccCceEEEEEEeC-CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC--eeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE--VPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~--~~~lv  214 (221)
                      .++|.+.+.||+|+||.||++... ++..||+|.++. ......+.+.+|+.+|++++||||+++++++....  ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            356788999999999999999964 488999999875 33344677899999999999999999999987754  67999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        88 ~e~~~~~   94 (319)
T 4euu_A           88 MEFCPCG   94 (319)
T ss_dssp             EECCTTC
T ss_pred             EeCCCCC
Confidence            9999875

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.41  E-value=1e-12  Score=102.21  Aligned_cols=82  Identities=22%  Similarity=0.324  Sum_probs=71.2

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      .++|.+.+.||+|+||.||++.. .++..+|+|.+... ......+.+|+.+|+.++||||+++++++...+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            35678899999999999999985 45788999988653 33456789999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        83 ~~g~   86 (321)
T 1tki_A           83 ISGL   86 (321)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9875

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.41  E-value=2.6e-13  Score=109.00  Aligned_cols=91  Identities=21%  Similarity=0.322  Sum_probs=77.1

Q ss_pred             chhhhhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEE
Q 036177          131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCL  206 (221)
Q Consensus       131 ~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~  206 (221)
                      ...++....++|.+.+.||+|+||.||++.. .++..||+|.++..   .......+.+|..+|..++||||+++++++.
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  131 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ  131 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            3455666778899999999999999999996 46899999998642   2233456899999999999999999999999


Q ss_pred             eCCeeEEEEEcccCC
Q 036177          207 ETEVPLLVYEFILNG  221 (221)
Q Consensus       207 ~~~~~~lv~e~~~~G  221 (221)
                      ..+..+|||||+++|
T Consensus       132 ~~~~~~lVmE~~~gg  146 (412)
T 2vd5_A          132 DENYLYLVMEYYVGG  146 (412)
T ss_dssp             CSSEEEEEECCCCSC
T ss_pred             eCCEEEEEEcCCCCC
Confidence            999999999999876

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.41  E-value=8.5e-13  Score=101.33  Aligned_cols=83  Identities=29%  Similarity=0.372  Sum_probs=71.2

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .++|.+.+.||+|+||.||++.. ..+..||+|.+..   ......+.|.+|+.++.+++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            35688899999999999999984 4688999998754   2233456799999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        90 ~e~~~g~   96 (294)
T 4eqm_A           90 MEYIEGP   96 (294)
T ss_dssp             EECCCSC
T ss_pred             EeCCCCC
Confidence            9999875

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.41  E-value=6.6e-13  Score=103.48  Aligned_cols=84  Identities=25%  Similarity=0.436  Sum_probs=66.1

Q ss_pred             hccCccccceecccCceEEEEEEe----CCCcEEEEEeccCC----CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSV----HESNVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~----~~~~~vavk~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      ..++|.+.+.||+|+||.||++..    ..+..+|+|.++..    .......+.+|+.+|+.++||||+++++++...+
T Consensus        15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   94 (327)
T 3a62_A           15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG   94 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence            346788899999999999999985    46889999998653    2233456889999999999999999999999999


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..++||||+++|
T Consensus        95 ~~~lv~e~~~~~  106 (327)
T 3a62_A           95 KLYLILEYLSGG  106 (327)
T ss_dssp             CEEEEEECCTTE
T ss_pred             EEEEEEeCCCCC
Confidence            999999999865

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.40  E-value=7.5e-13  Score=101.12  Aligned_cols=82  Identities=22%  Similarity=0.307  Sum_probs=71.4

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      +.|.+.+.||+|+||.||++.. .++..+|+|.+.. ......+.+.+|+.+|++++||||+++++++...+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            4577789999999999999985 4688999998865 3344567899999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus       102 ~~~~  105 (285)
T 3is5_A          102 CEGG  105 (285)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9875

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.40  E-value=7e-13  Score=101.41  Aligned_cols=81  Identities=30%  Similarity=0.426  Sum_probs=70.2

Q ss_pred             cCccccceecccCceEEEEEEeCCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|.+.+.||+|+||.||++....+..+|+|.++..  .......+.+|+.+|++++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            457788999999999999999877999999988642  233346789999999999999999999999999999999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus        82 ~~~   84 (288)
T 1ob3_A           82 LDQ   84 (288)
T ss_dssp             CSE
T ss_pred             cCC
Confidence            863

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.40  E-value=1e-12  Score=102.37  Aligned_cols=82  Identities=28%  Similarity=0.329  Sum_probs=70.3

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc------ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE------SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      +.|.+.+.||+|+||.||++.. .++..+|+|.++....      ...+.+.+|+.+|++++||||+++++++...+..+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            4577789999999999999985 4588999998754221      24678999999999999999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus        91 lv~e~~~~~   99 (326)
T 2y0a_A           91 LILELVAGG   99 (326)
T ss_dssp             EEEECCCSC
T ss_pred             EEEEcCCCC
Confidence            999999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.40  E-value=7.8e-13  Score=101.67  Aligned_cols=84  Identities=27%  Similarity=0.477  Sum_probs=71.1

Q ss_pred             hccCccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ..+.|.+.+.||+|+||.||++... ++..+|+|.+..........|.+|+.+++.++||||+++++++...+..+++||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            4466888999999999999999964 588999999877666667889999999999999999999999999889999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        97 ~~~~~  101 (302)
T 2j7t_A           97 FCPGG  101 (302)
T ss_dssp             CCTTE
T ss_pred             eCCCC
Confidence            99864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.40  E-value=4e-13  Score=102.61  Aligned_cols=88  Identities=30%  Similarity=0.518  Sum_probs=76.5

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      ++|+...++|.+.+.||+|+||.||++... .+..||+|.+... ....+.|.+|+.+++.++||||+++++++...+..
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   84 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   84 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence            456677788999999999999999999964 4788999998753 33467899999999999999999999999888899


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus        85 ~~v~e~~~~~   94 (288)
T 3kfa_A           85 YIITEFMTYG   94 (288)
T ss_dssp             EEEEECCTTE
T ss_pred             EEEEEcCCCC
Confidence            9999999864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.39  E-value=9.7e-13  Score=101.09  Aligned_cols=83  Identities=28%  Similarity=0.423  Sum_probs=65.7

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc--------------------------ccHHHHHHHHHHHH
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE--------------------------SNVEQFINEVVILS  191 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~--------------------------~~~~~~~~e~~~l~  191 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.+.....                          ...+.+.+|+.+|+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            35688899999999999999985 4688999998754221                          12356899999999


Q ss_pred             cCCCCceeeeeeEEEe--CCeeEEEEEcccCC
Q 036177          192 QINHRNVVKLLGCCLE--TEVPLLVYEFILNG  221 (221)
Q Consensus       192 ~l~h~niv~l~g~~~~--~~~~~lv~e~~~~G  221 (221)
                      +++||||+++++++..  .+..++||||+++|
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~  123 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQG  123 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCC
Confidence            9999999999999876  46789999999875

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.39  E-value=8.5e-13  Score=102.94  Aligned_cols=89  Identities=30%  Similarity=0.480  Sum_probs=76.0

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeCC------CcEEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeeeeeE
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTD------GRIVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKLLGC  204 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~------~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~g~  204 (221)
                      +.++...++|.+.+.||+|+||.||++....      ...||+|.++.. .....+.+.+|+.+|..+ +||||++++++
T Consensus        39 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             GGGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            4577788899999999999999999998532      247999998763 334567799999999999 89999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +...+..++||||+++|
T Consensus       119 ~~~~~~~~lv~e~~~~g  135 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYG  135 (333)
T ss_dssp             ECSSSSCEEEEECCTTE
T ss_pred             EecCCceEEEEecCCCC
Confidence            99989999999999875

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.39  E-value=8.1e-13  Score=102.61  Aligned_cols=90  Identities=27%  Similarity=0.512  Sum_probs=67.1

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEeCC-C---cEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEE
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD-G---RIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCC  205 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~-~---~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~  205 (221)
                      ..++..+.++|.+.+.||+|+||.||++.... +   ..||+|.++..  .....+.|.+|+.++++++||||+++++++
T Consensus        15 ~~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   94 (323)
T 3qup_A           15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVS   94 (323)
T ss_dssp             -CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred             hhhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhcee
Confidence            34566677889999999999999999998533 2   27999998653  445567899999999999999999999998


Q ss_pred             EeCCee------EEEEEcccCC
Q 036177          206 LETEVP------LLVYEFILNG  221 (221)
Q Consensus       206 ~~~~~~------~lv~e~~~~G  221 (221)
                      ......      +++|||+++|
T Consensus        95 ~~~~~~~~~~~~~~v~e~~~~~  116 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPFMKHG  116 (323)
T ss_dssp             ECC-------CEEEEEECCTTC
T ss_pred             eccccccCCCccEEEEEeccCC
Confidence            776544      8999999875

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.39  E-value=2.4e-12  Score=99.64  Aligned_cols=81  Identities=27%  Similarity=0.373  Sum_probs=70.1

Q ss_pred             Cccc-cceecccCceEEEEEE-eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEc
Q 036177          141 NYKV-SRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       141 ~~~~-~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      .|.+ .+.||+|+||.||++. ..++..||+|.++.........+.+|+.+|.++ +||||+++++++...+..++||||
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   92 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK   92 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence            4555 3689999999999998 456889999998765556677899999999985 799999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        93 ~~~~   96 (316)
T 2ac3_A           93 MRGG   96 (316)
T ss_dssp             CTTC
T ss_pred             CCCC
Confidence            9875

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.38  E-value=5.8e-13  Score=103.57  Aligned_cols=86  Identities=23%  Similarity=0.227  Sum_probs=70.5

Q ss_pred             hhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC----
Q 036177          134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETE----  209 (221)
Q Consensus       134 ~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~----  209 (221)
                      ++....++|.+.+.||+|+||.||++.. .+..||+|.++... .....+.+|+.+|++++||||+++++++....    
T Consensus        18 n~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   95 (322)
T 3soc_A           18 NLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDV   95 (322)
T ss_dssp             CEEETTEEEEEEEEEECSTTCEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred             ccccchhhchhhheecccCceEEEEEEE-CCCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCc
Confidence            3445567788899999999999999998 47899999986532 23445677999999999999999999988754    


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..++||||+++|
T Consensus        96 ~~~lv~e~~~~g  107 (322)
T 3soc_A           96 DLWLITAFHEKG  107 (322)
T ss_dssp             EEEEEEECCTTC
T ss_pred             eEEEEEecCCCC
Confidence            369999999876

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.38  E-value=1e-12  Score=110.56  Aligned_cols=86  Identities=29%  Similarity=0.454  Sum_probs=69.8

Q ss_pred             hhhhccCccccc-eecccCceEEEEEEeC---CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          135 LEKATDNYKVSR-IIGQGGQGTVFKGMLT---DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       135 ~~~~~~~~~~~~-~lg~G~fg~v~~~~~~---~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      +....+++.+.+ .||+|+||.||+|.+.   .+..||||.++.. .....++|.+|+.+|++++||||+++++++.. +
T Consensus       330 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~  408 (613)
T 2ozo_A          330 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E  408 (613)
T ss_dssp             SBCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S
T ss_pred             eeccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C
Confidence            344455555555 7999999999999863   4567999999763 34457889999999999999999999999865 5


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..++||||+++|
T Consensus       409 ~~~lv~E~~~~g  420 (613)
T 2ozo_A          409 ALMLVMEMAGGG  420 (613)
T ss_dssp             SEEEEEECCTTC
T ss_pred             CeEEEEEeCCCC
Confidence            689999999886

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.38  E-value=1.2e-12  Score=103.39  Aligned_cols=83  Identities=22%  Similarity=0.260  Sum_probs=71.8

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ..++|.+.+.||+|+||.||++.. .++..||+|.+..... ..+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            346788899999999999999995 4688999999865332 23568999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        97 ~~~~~  101 (361)
T 3uc3_A           97 YASGG  101 (361)
T ss_dssp             CCCSC
T ss_pred             eCCCC
Confidence            99876

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.38  E-value=1.3e-12  Score=99.62  Aligned_cols=87  Identities=29%  Similarity=0.504  Sum_probs=71.6

Q ss_pred             hhhhhccCccccceecccCceEEEEEEeCC----CcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTD----GRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       134 ~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~----~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      +++...++|.+.+.||+|+||.||++....    +..||+|.++. ......+.|.+|+.++++++||||+++++++ ..
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~   87 (281)
T 1mp8_A            9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TE   87 (281)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CS
T ss_pred             ceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-cc
Confidence            445666788899999999999999998632    45699999875 3444567899999999999999999999987 45


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      +..++||||+++|
T Consensus        88 ~~~~lv~e~~~~~  100 (281)
T 1mp8_A           88 NPVWIIMELCTLG  100 (281)
T ss_dssp             SSCEEEEECCTTE
T ss_pred             CccEEEEecCCCC
Confidence            6789999999864

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.38  E-value=1.4e-12  Score=99.93  Aligned_cols=81  Identities=20%  Similarity=0.349  Sum_probs=68.4

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      .+.....||+|+||.||++.. .++..||+|.++.......+.+.+|+.+++.++||||+++++++...+..+++|||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            344456899999999999995 5688999999877655666789999999999999999999999999999999999997


Q ss_pred             CC
Q 036177          220 NG  221 (221)
Q Consensus       220 ~G  221 (221)
                      +|
T Consensus       103 ~~  104 (295)
T 2clq_A          103 GG  104 (295)
T ss_dssp             EE
T ss_pred             CC
Confidence            54

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.38  E-value=1.7e-12  Score=99.13  Aligned_cols=86  Identities=29%  Similarity=0.469  Sum_probs=70.4

Q ss_pred             hhhhccCccccc-eecccCceEEEEEEeC---CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          135 LEKATDNYKVSR-IIGQGGQGTVFKGMLT---DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       135 ~~~~~~~~~~~~-~lg~G~fg~v~~~~~~---~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      +....+++.+.. .||+|+||.||++.+.   .+..||+|.++.. .....+.+.+|+.++++++||||+++++++ ..+
T Consensus         4 ~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~   82 (287)
T 1u59_A            4 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAE   82 (287)
T ss_dssp             CBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESS
T ss_pred             ccccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCC
Confidence            344556666666 8999999999999853   5778999998763 344567899999999999999999999998 566


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..++||||+++|
T Consensus        83 ~~~lv~e~~~~~   94 (287)
T 1u59_A           83 ALMLVMEMAGGG   94 (287)
T ss_dssp             SEEEEEECCTTE
T ss_pred             CcEEEEEeCCCC
Confidence            789999999864

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.38  E-value=1.6e-12  Score=100.35  Aligned_cols=82  Identities=30%  Similarity=0.410  Sum_probs=70.0

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++|...+.||+|+||.||++... ++..||+|.+...  .....+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            46778899999999999999964 5889999987553  22335678999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        83 ~~~~~   87 (311)
T 4agu_A           83 YCDHT   87 (311)
T ss_dssp             CCSEE
T ss_pred             eCCCc
Confidence            99754

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.38  E-value=1.6e-12  Score=99.03  Aligned_cols=83  Identities=25%  Similarity=0.428  Sum_probs=71.9

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.+..  ......+.+.+|+.++++++||||+++++++...+..+++|
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            35688899999999999999985 4588999998854  33445577899999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        85 e~~~~~   90 (284)
T 3kk8_A           85 DLVTGG   90 (284)
T ss_dssp             CCCCSC
T ss_pred             ecCCCC
Confidence            999875

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.38  E-value=9.3e-13  Score=102.29  Aligned_cols=83  Identities=23%  Similarity=0.410  Sum_probs=71.4

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .++|.+.+.||+|+||.||++.. .++..+|+|.++..   .....+.+.+|..+|+.++||||+++++.+...+..++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            35678889999999999999985 46889999998642   223456788999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        85 ~e~~~gg   91 (318)
T 1fot_A           85 MDYIEGG   91 (318)
T ss_dssp             ECCCCSC
T ss_pred             EeCCCCC
Confidence            9999876

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.37  E-value=8.1e-13  Score=103.90  Aligned_cols=82  Identities=28%  Similarity=0.462  Sum_probs=70.1

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCC---cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH---ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .+.|...+.||+|+||.||++.. .++..||+|.+....   ....+.|.+|+.+|++++||||+++++++...+..++|
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  132 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV  132 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence            34577889999999999999984 578899999986432   23346799999999999999999999999999999999


Q ss_pred             EEcccC
Q 036177          215 YEFILN  220 (221)
Q Consensus       215 ~e~~~~  220 (221)
                      |||+++
T Consensus       133 ~e~~~g  138 (348)
T 1u5q_A          133 MEYCLG  138 (348)
T ss_dssp             EECCSE
T ss_pred             EecCCC
Confidence            999964

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.37  E-value=6.3e-13  Score=102.93  Aligned_cols=87  Identities=23%  Similarity=0.339  Sum_probs=72.1

Q ss_pred             hhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe----CC
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE----TE  209 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~----~~  209 (221)
                      +.+..++|.+.+.||+|+||.||++.. .++..||+|.+........+.+.+|+.+++.++||||+++++++..    ..
T Consensus        24 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (317)
T 2buj_A           24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH  103 (317)
T ss_dssp             EEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred             EEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence            344557788999999999999999985 5789999998876566667889999999999999999999999863    34


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..++++||+++|
T Consensus       104 ~~~lv~e~~~~~  115 (317)
T 2buj_A          104 EAWLLLPFFKRG  115 (317)
T ss_dssp             EEEEEEECCTTC
T ss_pred             eeEEEEEeCCCC
Confidence            788999999875

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.37  E-value=1.3e-12  Score=100.58  Aligned_cols=82  Identities=24%  Similarity=0.351  Sum_probs=68.7

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.++.........+.+|+.++++++||||+++++++...+..+++|||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            4577889999999999999985 468899999987654445567999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        89 ~~~   91 (304)
T 2jam_A           89 SGG   91 (304)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            865

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.37  E-value=1.1e-12  Score=101.71  Aligned_cols=81  Identities=31%  Similarity=0.495  Sum_probs=57.8

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|...+.||+|+||.||++.. .++..||+|.++. ........+.+|+.+|++++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   84 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF   84 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence            4677789999999999999985 4688999998864 3333456789999999999999999999999999999999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus        85 ~~~   87 (317)
T 2pmi_A           85 MDN   87 (317)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            974

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.37  E-value=7.2e-13  Score=107.42  Aligned_cols=82  Identities=18%  Similarity=0.316  Sum_probs=69.3

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++|.+.+.||+|+||.||++.. .++..+|+|.+...  .....+.+.+|+.+|+.++||||+++++++...+..++|||
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E   90 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD   90 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence            5578889999999999999984 56889999988652  33445679999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        91 ~~~gg   95 (444)
T 3soa_A           91 LVTGG   95 (444)
T ss_dssp             CCBCC
T ss_pred             eCCCC
Confidence            99876

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.37  E-value=2.6e-12  Score=100.02  Aligned_cols=83  Identities=25%  Similarity=0.358  Sum_probs=71.5

Q ss_pred             ccCccccceecccCceEEEEEEe-----CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe--CCee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-----TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE--TEVP  211 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-----~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~  211 (221)
                      .++|.+.+.||+|+||.||++.+     ..+..||+|.+........+.|.+|+.++++++||||+++++++..  ....
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            35678899999999999999984     3578899999987666667789999999999999999999998874  4568


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus       102 ~lv~e~~~~~  111 (327)
T 3lxl_A          102 RLVMEYLPSG  111 (327)
T ss_dssp             EEEEECCTTC
T ss_pred             EEEEeecCCC
Confidence            8999999875

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.37  E-value=8.1e-13  Score=105.14  Aligned_cols=84  Identities=24%  Similarity=0.386  Sum_probs=72.1

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      ..++|.+.+.||+|+||.||++.. ..+..+|+|.+..   ........+.+|+.+|..++||||+++++++...+..++
T Consensus        13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l   92 (384)
T 4fr4_A           13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM   92 (384)
T ss_dssp             CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            346688899999999999999985 4578899998754   233445779999999999999999999999999999999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ||||+++|
T Consensus        93 v~e~~~gg  100 (384)
T 4fr4_A           93 VVDLLLGG  100 (384)
T ss_dssp             EECCCTTE
T ss_pred             EEecCCCC
Confidence            99999875

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.36  E-value=1.6e-12  Score=100.48  Aligned_cols=92  Identities=32%  Similarity=0.472  Sum_probs=76.2

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEe------CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcC-CCCceeee
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKSV-HESNVEQFINEVVILSQI-NHRNVVKL  201 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~------~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l  201 (221)
                      +....+....++|.+.+.||+|+||.||++..      ..+..||+|.++.. .....+.+.+|+.++.++ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            45567778888999999999999999999974      24578999998753 334456799999999999 79999999


Q ss_pred             eeEEEeCC-eeEEEEEcccCC
Q 036177          202 LGCCLETE-VPLLVYEFILNG  221 (221)
Q Consensus       202 ~g~~~~~~-~~~lv~e~~~~G  221 (221)
                      ++++...+ ..+++|||+++|
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~  117 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFG  117 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTE
T ss_pred             EEEEecCCCceEEEEEcCCCC
Confidence            99987654 589999999864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.36  E-value=1.4e-12  Score=107.12  Aligned_cols=82  Identities=23%  Similarity=0.320  Sum_probs=67.5

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      +.|.+.+.||+|+||.||++.. ..+..+|+|.++..  .......+.+|+.+|+.++||||+++++++...+..++|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            4578899999999999999995 46889999988652  33446779999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus       117 ~~~~g  121 (494)
T 3lij_A          117 CYKGG  121 (494)
T ss_dssp             CCCSC
T ss_pred             cCCCC
Confidence            99876

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.36  E-value=3.3e-12  Score=98.17  Aligned_cols=83  Identities=31%  Similarity=0.421  Sum_probs=67.9

Q ss_pred             ccCccccceecccCceEEEEEEe-----CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--Ce
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-----TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET--EV  210 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-----~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~  210 (221)
                      ...|+..+.||+|+||.||++.+     ..+..||+|.++. ........+.+|+.+|..++||||+++++++...  +.
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   99 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   99 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence            35577889999999999999984     3578899999875 3444567899999999999999999999998775  56


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+++|||+++|
T Consensus       100 ~~lv~e~~~~~  110 (302)
T 4e5w_A          100 IKLIMEFLPSG  110 (302)
T ss_dssp             EEEEEECCTTC
T ss_pred             EEEEEEeCCCC
Confidence            89999999875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.36  E-value=1.7e-12  Score=103.77  Aligned_cols=83  Identities=31%  Similarity=0.490  Sum_probs=70.1

Q ss_pred             ccCccccceecccCceEEEEEEeC-CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC--eeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE--VPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~--~~~lv  214 (221)
                      .++|.+.+.||+|+||.||++... ++..||+|.++. ......+.+.+|+.+|++++||||+++++++...+  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            356788999999999999999964 488999999875 23344677899999999999999999999988754  67999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        88 ~e~~~~g   94 (396)
T 4eut_A           88 MEFCPCG   94 (396)
T ss_dssp             ECCCTTE
T ss_pred             EecCCCC
Confidence            9999865

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.36  E-value=3.2e-12  Score=98.68  Aligned_cols=83  Identities=29%  Similarity=0.456  Sum_probs=70.4

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.++.   ........+.+|+.++++++||||+++++.+...+..+++
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            35688899999999999999985 5789999998864   2334467799999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus       111 ~e~~~~~  117 (310)
T 2wqm_A          111 LELADAG  117 (310)
T ss_dssp             EECCCSC
T ss_pred             EecCCCC
Confidence            9999875

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.36  E-value=1.6e-12  Score=102.33  Aligned_cols=82  Identities=24%  Similarity=0.317  Sum_probs=71.2

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.++..   .....+.+.+|+.+|..++||||+++++++...+..++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            5678889999999999999995 46889999998542   2344567999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus       121 e~~~gg  126 (350)
T 1rdq_E          121 EYVAGG  126 (350)
T ss_dssp             ECCTTC
T ss_pred             cCCCCC
Confidence            999876

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.36  E-value=1.5e-12  Score=102.70  Aligned_cols=83  Identities=23%  Similarity=0.314  Sum_probs=72.6

Q ss_pred             ccCccccceecccCceEEEEEEeC-CCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      .++|.+.+.||+|+||.||++... ++..||+|.++.. .......+.+|+.+|++++||||+++++++...+..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            456888999999999999999964 6889999998653 44456789999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus       112 ~~~~~  116 (360)
T 3eqc_A          112 HMDGG  116 (360)
T ss_dssp             CCTTC
T ss_pred             CCCCC
Confidence            99875

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.36  E-value=2.1e-12  Score=101.40  Aligned_cols=83  Identities=25%  Similarity=0.415  Sum_probs=70.7

Q ss_pred             ccCccccceecccCceEEEEEEeC-CCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  213 (221)
                      .++|.+.+.||+|+||.||++... ++..+|+|.++..   .......+.+|..+|.++ +||||+++++++...+..++
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            356788899999999999999964 5789999998642   333456688999999988 89999999999999999999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ||||+++|
T Consensus        88 v~e~~~gg   95 (345)
T 3a8x_A           88 VIEYVNGG   95 (345)
T ss_dssp             EECCCCSC
T ss_pred             EEeCCCCC
Confidence            99999876

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.36  E-value=1.2e-12  Score=102.98  Aligned_cols=83  Identities=22%  Similarity=0.310  Sum_probs=65.4

Q ss_pred             hhccCccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ...+.|.+.+.||+|+||.||++... .+..||+|.++...  ..+.+.+|+.+|.+++||||+++++++...+..++||
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  127 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL  127 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence            34567888999999999999999964 57889999987532  3456889999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus       128 e~~~~~  133 (349)
T 2w4o_A          128 ELVTGG  133 (349)
T ss_dssp             CCCCSC
T ss_pred             EeCCCC
Confidence            999875

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.35  E-value=3.7e-12  Score=98.00  Aligned_cols=83  Identities=28%  Similarity=0.452  Sum_probs=71.9

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      .+.|...+.||+|+||.||++.. .++..||+|.+.. ......+.+.+|+.+++.++||||+++++.+...+..++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            35577889999999999999985 4688999999865 334456789999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus       101 ~~~~~  105 (303)
T 3a7i_A          101 YLGGG  105 (303)
T ss_dssp             CCTTE
T ss_pred             eCCCC
Confidence            99864

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.35  E-value=3.2e-12  Score=105.33  Aligned_cols=83  Identities=27%  Similarity=0.349  Sum_probs=68.7

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc-------------ccHHHHHHHHHHHHcCCCCceeeeeeE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE-------------SNVEQFINEVVILSQINHRNVVKLLGC  204 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~l~g~  204 (221)
                      .++|.+.+.||+|+||.||++.. ..+..+|+|.++....             ...+.+.+|+.+|++++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            45688899999999999999995 4578999998764221             335679999999999999999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +......++||||+++|
T Consensus       115 ~~~~~~~~lv~e~~~gg  131 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGG  131 (504)
T ss_dssp             EECSSEEEEEEECCTTC
T ss_pred             EEcCCEEEEEEecCCCC
Confidence            99999999999999876

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.35  E-value=3.9e-12  Score=96.85  Aligned_cols=82  Identities=28%  Similarity=0.428  Sum_probs=71.4

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccC--CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS--VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||.||++... ++..||+|.++.  ........+.+|+..+..+ +||||+++++++...+..++||
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            55778899999999999999964 689999998865  3344567799999999999 9999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        91 e~~~~~   96 (289)
T 1x8b_A           91 EYCNGG   96 (289)
T ss_dssp             ECCTTC
T ss_pred             EecCCC
Confidence            999875

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.35  E-value=3.6e-12  Score=97.02  Aligned_cols=82  Identities=27%  Similarity=0.344  Sum_probs=70.1

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCC------cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH------ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      ++|.+.+.||+|+||.||++... ++..+|+|.++...      ....+.|.+|+.+|++++||||+++++++...+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            45777899999999999999964 68899999875421      123678999999999999999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      ++|||+++|
T Consensus        85 lv~e~~~~~   93 (283)
T 3bhy_A           85 LILELVSGG   93 (283)
T ss_dssp             EEEECCCSC
T ss_pred             EEEeecCCC
Confidence            999999765

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.35  E-value=2.1e-12  Score=101.74  Aligned_cols=84  Identities=31%  Similarity=0.497  Sum_probs=71.0

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  212 (221)
                      ..++|.+.+.||+|+||.||++.. .++..+|+|.++..   .......+.+|..+|..+ +||||+++++++...+..+
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            346788899999999999999985 45889999998642   334456788999999988 7999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus       101 lv~E~~~gg  109 (353)
T 3txo_A          101 FVMEFVNGG  109 (353)
T ss_dssp             EEEECCCSC
T ss_pred             EEEeCCCCC
Confidence            999999876

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.35  E-value=1.8e-12  Score=100.11  Aligned_cols=78  Identities=37%  Similarity=0.570  Sum_probs=66.9

Q ss_pred             ccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      .++|.+.+.||+|+||.||++.. .+..||+|.+...  ...+.|.+|+.+|++++||||+++++++.  +..++||||+
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~   81 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA   81 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred             HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence            45677789999999999999998 5788999998642  34578999999999999999999999875  4579999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~~   84 (307)
T 2eva_A           82 EGG   84 (307)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            875

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.35  E-value=1.5e-12  Score=101.30  Aligned_cols=86  Identities=29%  Similarity=0.506  Sum_probs=70.5

Q ss_pred             hhhccCccccceecccCceEEEEEEe------CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~------~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      ....++|.+.+.||+|+||.||++.+      ..+..||+|.+.. ........|.+|+.++++++||||+++++++...
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS  105 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence            34567788899999999999999984      2466899999865 3444566899999999999999999999999998


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      +..++||||+++|
T Consensus       106 ~~~~lv~e~~~~~  118 (327)
T 2yfx_A          106 LPRFILMELMAGG  118 (327)
T ss_dssp             SSCEEEEECCTTE
T ss_pred             CCcEEEEecCCCC
Confidence            8999999999764

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.35  E-value=2e-12  Score=100.94  Aligned_cols=86  Identities=30%  Similarity=0.483  Sum_probs=71.7

Q ss_pred             hhhccCccccceecccCceEEEEEEeCC-----CcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTD-----GRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~-----~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      ++...+|...+.||+|+||.||++....     +..||+|.++.. .......|.+|+.++++++||||+++++++...+
T Consensus        40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  119 (333)
T 1mqb_A           40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK  119 (333)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC
Confidence            3455678888999999999999998532     235999998753 3444567999999999999999999999998888


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..++||||+++|
T Consensus       120 ~~~lv~e~~~~~  131 (333)
T 1mqb_A          120 PMMIITEYMENG  131 (333)
T ss_dssp             SEEEEEECCTTE
T ss_pred             CcEEEEeCCCCC
Confidence            999999999875

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.35  E-value=3e-12  Score=99.40  Aligned_cols=82  Identities=28%  Similarity=0.321  Sum_probs=70.4

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc------ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE------SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      +.|.+.+.||+|+||.||++.. .++..+|+|.++....      ...+.+.+|+.+|.+++||||+++++++...+..+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            4577889999999999999985 4688999998754221      13677999999999999999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus        92 lv~e~~~~~  100 (321)
T 2a2a_A           92 LILELVSGG  100 (321)
T ss_dssp             EEECCCCSC
T ss_pred             EEEEcCCCC
Confidence            999999865

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.34  E-value=1.4e-12  Score=102.08  Aligned_cols=81  Identities=19%  Similarity=0.229  Sum_probs=69.2

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .++|.+.+.||+|+||.||++.. ..+..||+|.+...   .......+.+|+.+|+.++||||+++++++...+..++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            35688899999999999999995 57889999987541   222345789999999999999999999999999999999


Q ss_pred             EEccc
Q 036177          215 YEFIL  219 (221)
Q Consensus       215 ~e~~~  219 (221)
                      |||+.
T Consensus        88 ~E~~~   92 (336)
T 3h4j_B           88 IEYAG   92 (336)
T ss_dssp             ECCCC
T ss_pred             EECCC
Confidence            99984

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.34  E-value=1.7e-12  Score=106.53  Aligned_cols=82  Identities=23%  Similarity=0.388  Sum_probs=71.4

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.+..  ........+.+|+.+|++++||||+++++++...+..++|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            4577889999999999999985 4688999999754  233456789999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus       102 ~~~~~  106 (486)
T 3mwu_A          102 LYTGG  106 (486)
T ss_dssp             CCCSC
T ss_pred             cCCCC
Confidence            99876

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.34  E-value=3.4e-12  Score=99.33  Aligned_cols=84  Identities=30%  Similarity=0.493  Sum_probs=71.1

Q ss_pred             hccCccccceecccCceEEEEEEe-----CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--Ce
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-----TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLET--EV  210 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-----~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~  210 (221)
                      ..++|.+.+.||+|+||.||++.+     .++..||+|.++.......+.|.+|+.++++++||||+++++++...  ..
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  118 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN  118 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred             CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence            345678899999999999999984     35789999999876666678899999999999999999999988654  36


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++||||+++|
T Consensus       119 ~~lv~e~~~~~  129 (326)
T 2w1i_A          119 LKLIMEYLPYG  129 (326)
T ss_dssp             CEEEECCCTTC
T ss_pred             eEEEEECCCCC
Confidence            89999999875

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.34  E-value=5e-12  Score=98.07  Aligned_cols=81  Identities=30%  Similarity=0.451  Sum_probs=68.3

Q ss_pred             CccccceecccCceEEEEEEeC-----CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--CeeE
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT-----DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET--EVPL  212 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~-----~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--~~~~  212 (221)
                      .|.+.+.||+|+||.||++.+.     ++..||+|.++. ........|.+|+.+|++++||||+++++++...  ...+
T Consensus        32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  111 (318)
T 3lxp_A           32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ  111 (318)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred             HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence            3477899999999999998752     577899999875 3344567799999999999999999999999874  5788


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus       112 lv~e~~~~~  120 (318)
T 3lxp_A          112 LVMEYVPLG  120 (318)
T ss_dssp             EEECCCTTC
T ss_pred             EEEecccCC
Confidence            999999875

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.34  E-value=2.3e-12  Score=97.89  Aligned_cols=82  Identities=27%  Similarity=0.438  Sum_probs=70.5

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.+...   .....+.+.+|+.++++++||||+++++++...+..+++|
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            5678889999999999999985 57889999988542   2233567999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        91 e~~~~~   96 (278)
T 3cok_A           91 EMCHNG   96 (278)
T ss_dssp             ECCTTE
T ss_pred             ecCCCC
Confidence            999764

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.34  E-value=2.1e-12  Score=103.18  Aligned_cols=84  Identities=24%  Similarity=0.410  Sum_probs=69.6

Q ss_pred             hccCccccceecccCceEEEEEEeC-CCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  212 (221)
                      ..++|.+.+.||+|+||.||++... ++..+|+|.++..   .......+.+|..+|.++ +||||+++++++...+..+
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  129 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF  129 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence            4467888999999999999999954 5788999998642   233345688999999887 8999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus       130 lV~E~~~gg  138 (396)
T 4dc2_A          130 FVIEYVNGG  138 (396)
T ss_dssp             EEEECCTTC
T ss_pred             EEEEcCCCC
Confidence            999999886

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.34  E-value=3.3e-12  Score=96.86  Aligned_cols=82  Identities=27%  Similarity=0.386  Sum_probs=70.9

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|.+.+.||+|+||.||++... ++..||+|.++. ......+.+.+|+.+++.++||||+++++++...+..++++||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            45778899999999999999864 688999999864 2334457899999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        87 ~~~~   90 (276)
T 2yex_A           87 CSGG   90 (276)
T ss_dssp             CTTE
T ss_pred             cCCC
Confidence            9764

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.34  E-value=1.6e-12  Score=106.17  Aligned_cols=83  Identities=24%  Similarity=0.312  Sum_probs=71.3

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.++..   .......+.+|+.+|+.++||||+++++++...+..++|
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            35688899999999999999985 46899999998642   223356799999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        95 ~E~~~gg  101 (476)
T 2y94_A           95 MEYVSGG  101 (476)
T ss_dssp             EECCSSE
T ss_pred             EeCCCCC
Confidence            9999865

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.34  E-value=8.2e-13  Score=107.22  Aligned_cols=85  Identities=21%  Similarity=0.280  Sum_probs=64.1

Q ss_pred             hhccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      ...++|.+.+.||+|+||.||++.. .++..||+|.++.   ........+.+|+.+|+.++||||+++++++...+..+
T Consensus       145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~  224 (446)
T 4ejn_A          145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLC  224 (446)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEE
T ss_pred             CChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEE
Confidence            3456788899999999999999984 5688999999864   23344567889999999999999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus       225 lv~e~~~~~  233 (446)
T 4ejn_A          225 FVMEYANGG  233 (446)
T ss_dssp             EEECCCSSC
T ss_pred             EEEeeCCCC
Confidence            999999876

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.33  E-value=2.2e-12  Score=107.31  Aligned_cols=85  Identities=26%  Similarity=0.391  Sum_probs=72.8

Q ss_pred             hhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      ...++|...+.||+|+||.||++.. .++..||+|.+...   .......+.+|+.+|..++||||+++++++...+..+
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~  260 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC  260 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence            3456788899999999999999985 46899999988542   2234567899999999999999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus       261 lVmEy~~gg  269 (576)
T 2acx_A          261 LVLTLMNGG  269 (576)
T ss_dssp             EEECCCCSC
T ss_pred             EEEEcCCCC
Confidence            999999876

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.33  E-value=2.2e-12  Score=98.05  Aligned_cols=86  Identities=30%  Similarity=0.469  Sum_probs=70.7

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC-Cee
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLET-EVP  211 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-~~~  211 (221)
                      ..+....++|.+.+.||+|+||.||++.. .+..||+|.++...  ..+.|.+|+.++++++||||+++++++... +..
T Consensus        14 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (278)
T 1byg_A           14 SGWALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL   90 (278)
T ss_dssp             -CCBCCGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CC
T ss_pred             ccccCChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCce
Confidence            34555667888999999999999999988 58899999987532  456799999999999999999999987654 478


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      +++|||+++|
T Consensus        91 ~lv~e~~~~~  100 (278)
T 1byg_A           91 YIVTEYMAKG  100 (278)
T ss_dssp             EEEECCCTTE
T ss_pred             EEEEecCCCC
Confidence            9999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.33  E-value=4.5e-12  Score=97.14  Aligned_cols=83  Identities=20%  Similarity=0.293  Sum_probs=70.8

Q ss_pred             ccCccccceecccCceEEEEEEeC-CCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .++|...+.||+|+||.||++... .+..+|+|.+...   .....+.+.+|+.+++.++||||+++++++...+..+++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            356778899999999999999964 5788999987542   334466799999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        94 ~e~~~~~  100 (294)
T 2rku_A           94 LELCRRR  100 (294)
T ss_dssp             EECCTTC
T ss_pred             EecCCCC
Confidence            9999865

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.33  E-value=1.1e-12  Score=101.49  Aligned_cols=83  Identities=27%  Similarity=0.331  Sum_probs=68.5

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe----
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEV----  210 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~----  210 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.++..   .......|.+|+.++.+++||||+++++++.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            35688899999999999999994 57889999998653   22334678999999999999999999998876543    


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++||||+++|
T Consensus        91 ~~lv~e~~~g~  101 (311)
T 3ork_A           91 PYIVMEYVDGV  101 (311)
T ss_dssp             EEEEEECCCEE
T ss_pred             cEEEEecCCCC
Confidence            49999999764

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.33  E-value=1.6e-12  Score=101.95  Aligned_cols=82  Identities=21%  Similarity=0.395  Sum_probs=71.2

Q ss_pred             ccCccccceecccCceEEEEEEeCCCcEEEEEeccCCC---ccc--------------HHHHHHHHHHHHcCCCCceeee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVH---ESN--------------VEQFINEVVILSQINHRNVVKL  201 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~---~~~--------------~~~~~~e~~~l~~l~h~niv~l  201 (221)
                      .++|.+.+.||+|+||.||++.. ++..||+|.+....   ...              ...|.+|+.++.+++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            46788899999999999999999 89999999875421   111              1789999999999999999999


Q ss_pred             eeEEEeCCeeEEEEEcccCC
Q 036177          202 LGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       202 ~g~~~~~~~~~lv~e~~~~G  221 (221)
                      ++++...+..++||||+++|
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~  128 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMEND  128 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTC
T ss_pred             EEEEeeCCeEEEEEeccCCC
Confidence            99999999999999999875

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.33  E-value=2.4e-12  Score=101.06  Aligned_cols=85  Identities=21%  Similarity=0.365  Sum_probs=71.2

Q ss_pred             hhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCee
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~  211 (221)
                      ...++|.+.+.||+|+||.||++.. .++..||+|.++..   .......+.+|..+|..+ +||||+++++++...+..
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            3456788899999999999999996 45889999998642   233456788999999877 999999999999999999


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus        94 ~lv~E~~~gg  103 (345)
T 1xjd_A           94 FFVMEYLNGG  103 (345)
T ss_dssp             EEEEECCTTC
T ss_pred             EEEEeCCCCC
Confidence            9999999876

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.33  E-value=5.5e-12  Score=95.68  Aligned_cols=83  Identities=24%  Similarity=0.310  Sum_probs=71.5

Q ss_pred             ccCccccceecccCceEEEEEEeC-CCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .++|.+.+.||+|+||.||++... ++..||+|.++..   .....+.+.+|+.+++.++||||+++++++...+..+++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            456888999999999999999964 6889999988542   223456799999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        90 ~e~~~~~   96 (276)
T 2h6d_A           90 MEYVSGG   96 (276)
T ss_dssp             EECCCSC
T ss_pred             EeccCCC
Confidence            9999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.33  E-value=2.4e-12  Score=97.86  Aligned_cols=84  Identities=25%  Similarity=0.387  Sum_probs=70.7

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      ..++|.+.+.||+|+||.||++.. .++..||+|.+...   .......+.+|+.++++++||||+++++++...+..++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            346688899999999999999985 45778999987542   22335679999999999999999999999999999999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      +|||+++|
T Consensus        87 v~e~~~~~   94 (279)
T 3fdn_A           87 ILEYAPLG   94 (279)
T ss_dssp             EECCCTTE
T ss_pred             EEecCCCC
Confidence            99999864

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.33  E-value=2.5e-12  Score=100.23  Aligned_cols=83  Identities=27%  Similarity=0.447  Sum_probs=67.8

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      ..++|.+.+.||+|+||.||++.. .++..||+|.++..  .......+.+|+.+|++++||||+++++++...+..++|
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            346688899999999999999984 46889999998653  223345688999999999999999999999999999999


Q ss_pred             EEcccC
Q 036177          215 YEFILN  220 (221)
Q Consensus       215 ~e~~~~  220 (221)
                      |||+++
T Consensus       112 ~e~~~~  117 (329)
T 3gbz_A          112 FEYAEN  117 (329)
T ss_dssp             EECCSE
T ss_pred             EecCCC
Confidence            999863

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.33  E-value=4.1e-12  Score=97.22  Aligned_cols=88  Identities=27%  Similarity=0.404  Sum_probs=69.2

Q ss_pred             hhhhhhccCccccc-eecccCceEEEEEEe---CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEE
Q 036177          133 KDLEKATDNYKVSR-IIGQGGQGTVFKGML---TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCL  206 (221)
Q Consensus       133 ~~~~~~~~~~~~~~-~lg~G~fg~v~~~~~---~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~  206 (221)
                      .++....++|.+.+ .||+|+||.||++.+   ..+..||+|.++..  .....+.|.+|+.+++.++||||+++++++ 
T Consensus         9 ~~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-   87 (291)
T 1xbb_A            9 KEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-   87 (291)
T ss_dssp             --CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-
T ss_pred             ceeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-
Confidence            44455666777777 999999999999964   23678999998753  233367899999999999999999999998 


Q ss_pred             eCCeeEEEEEcccCC
Q 036177          207 ETEVPLLVYEFILNG  221 (221)
Q Consensus       207 ~~~~~~lv~e~~~~G  221 (221)
                      ..+..+++|||+++|
T Consensus        88 ~~~~~~lv~e~~~~~  102 (291)
T 1xbb_A           88 EAESWMLVMEMAELG  102 (291)
T ss_dssp             ESSSEEEEEECCTTE
T ss_pred             CCCCcEEEEEeCCCC
Confidence            666789999999864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.33  E-value=2.6e-12  Score=100.18  Aligned_cols=83  Identities=31%  Similarity=0.495  Sum_probs=70.5

Q ss_pred             ccCccccceecccCceEEEEEEeC-CCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      .++|.+.+.||+|+||.||++... ++..||+|.+...  .....+.+.+|+.++++++||||+++++++...+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            356788899999999999999964 5889999987542  2333566889999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus       104 e~~~~~  109 (331)
T 4aaa_A          104 EFVDHT  109 (331)
T ss_dssp             ECCSEE
T ss_pred             ecCCcc
Confidence            999753

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.33  E-value=9.5e-13  Score=101.15  Aligned_cols=87  Identities=21%  Similarity=0.383  Sum_probs=58.0

Q ss_pred             hhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      +....++|.+.+.||+|+||.||++.. .++..||+|.+... .......+.+|+.++.+++||||+++++++...+..+
T Consensus        10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   89 (303)
T 2vwi_A           10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW   89 (303)
T ss_dssp             ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred             cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence            455667889999999999999999984 46889999988642 2344567899999999999999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus        90 lv~e~~~~~   98 (303)
T 2vwi_A           90 LVMKLLSGG   98 (303)
T ss_dssp             EEEECCTTC
T ss_pred             EEehhccCC
Confidence            999999875

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.32  E-value=3.6e-12  Score=104.45  Aligned_cols=83  Identities=30%  Similarity=0.426  Sum_probs=71.8

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .+.|...+.||+|+||.||++.. ..+..||+|.+..   ........+.+|+.+|++++||||+++++++...+..++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            34577889999999999999985 4688999998754   2234567899999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus       105 ~e~~~~~  111 (484)
T 3nyv_A          105 GEVYTGG  111 (484)
T ss_dssp             ECCCCSC
T ss_pred             EecCCCC
Confidence            9999876

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.32  E-value=4.9e-12  Score=96.08  Aligned_cols=83  Identities=25%  Similarity=0.453  Sum_probs=69.9

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe--CCeeEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLE--TEVPLL  213 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~l  213 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.+..  ......+.|.+|+.++++++||||+++++++..  ....++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            35678889999999999999985 4688999999864  234456779999999999999999999998765  567899


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      +|||+++|
T Consensus        85 v~e~~~~~   92 (279)
T 2w5a_A           85 VMEYCEGG   92 (279)
T ss_dssp             EEECCTTE
T ss_pred             EEeCCCCC
Confidence            99999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.32  E-value=5e-12  Score=96.57  Aligned_cols=82  Identities=23%  Similarity=0.390  Sum_probs=71.6

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++|.+.+.||+|+||.||++... ++..||+|.+..  ........+.+|+.++++++||||+++++++...+..++++|
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  101 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence            56788999999999999999964 688999998754  334456789999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus       102 ~~~~~  106 (287)
T 2wei_A          102 LYTGG  106 (287)
T ss_dssp             CCCSC
T ss_pred             ccCCC
Confidence            99865

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.32  E-value=5.5e-12  Score=106.53  Aligned_cols=83  Identities=27%  Similarity=0.402  Sum_probs=65.8

Q ss_pred             hccCcccc-ceecccCceEEEEEEeC---CCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          138 ATDNYKVS-RIIGQGGQGTVFKGMLT---DGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       138 ~~~~~~~~-~~lg~G~fg~v~~~~~~---~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      ....+.+. +.||+|+||.||+|.+.   .+..||||.++.  ......++|.+|+.+|.+++|||||++++++. .+..
T Consensus       366 ~~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~  444 (635)
T 4fl3_A          366 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESW  444 (635)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSE
T ss_pred             cchhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCE
Confidence            33334433 47999999999999752   357899999875  33344678999999999999999999999885 4567


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus       445 ~lv~E~~~~g  454 (635)
T 4fl3_A          445 MLVMEMAELG  454 (635)
T ss_dssp             EEEEECCTTE
T ss_pred             EEEEEccCCC
Confidence            8999999875

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.32  E-value=4.9e-12  Score=98.86  Aligned_cols=83  Identities=20%  Similarity=0.293  Sum_probs=71.3

Q ss_pred             ccCccccceecccCceEEEEEEeC-CCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .++|.+.+.||+|+||.||++... .+..+|+|.+...   .....+.+.+|+.+++.++||||+++++++...+..+++
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            456888999999999999999964 5788999987542   334567799999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus       120 ~e~~~~~  126 (335)
T 2owb_A          120 LELCRRR  126 (335)
T ss_dssp             ECCCTTC
T ss_pred             EecCCCC
Confidence            9999865

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.32  E-value=5.7e-12  Score=97.36  Aligned_cols=83  Identities=19%  Similarity=0.236  Sum_probs=71.1

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCC---cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH---ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.++...   ....+.|.+|+.++.+++||||+++++++...+..+++
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            36688899999999999999995 468899999986532   22346799999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      +||+++|
T Consensus       113 ~e~~~~~  119 (309)
T 2h34_A          113 MRLINGV  119 (309)
T ss_dssp             EECCCCE
T ss_pred             EEecCCC
Confidence            9999864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.31  E-value=3.4e-12  Score=98.70  Aligned_cols=91  Identities=30%  Similarity=0.569  Sum_probs=70.6

Q ss_pred             chhhhhhhccCccccceecccCceEEEEEEeC----CCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeE
Q 036177          131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLT----DGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGC  204 (221)
Q Consensus       131 ~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~----~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~  204 (221)
                      ..+++....++|.+.+.||+|+||.||++...    .+..||+|.++..  .....+.|.+|+.++++++||||++++++
T Consensus        25 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~  104 (313)
T 3brb_A           25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGV  104 (313)
T ss_dssp             CTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEE
T ss_pred             hHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEE
Confidence            34566677788999999999999999999853    2447999998653  33445779999999999999999999999


Q ss_pred             EEeCC-----eeEEEEEcccCC
Q 036177          205 CLETE-----VPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~-----~~~lv~e~~~~G  221 (221)
                      +...+     ..+++|||+++|
T Consensus       105 ~~~~~~~~~~~~~~v~e~~~~~  126 (313)
T 3brb_A          105 CIEMSSQGIPKPMVILPFMKYG  126 (313)
T ss_dssp             EEC-------CEEEEEECCTTC
T ss_pred             EeeccccCCcccEEEEecccCC
Confidence            87654     359999999875

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.31  E-value=2.2e-12  Score=105.19  Aligned_cols=83  Identities=27%  Similarity=0.390  Sum_probs=69.3

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC------C
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLET------E  209 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~  209 (221)
                      .++|.+.+.||+|+||.||++.. ..+..||+|.+...  .......+.+|+.+|+.++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            46788899999999999999984 46889999998652  444567799999999999999999999998654      3


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..+|||||+++|
T Consensus       141 ~~~lv~E~~~~~  152 (464)
T 3ttj_A          141 DVYLVMELMDAN  152 (464)
T ss_dssp             EEEEEEECCSEE
T ss_pred             eEEEEEeCCCCC
Confidence            569999999753

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.31  E-value=3.5e-12  Score=100.64  Aligned_cols=88  Identities=24%  Similarity=0.373  Sum_probs=72.4

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCc-----------ccHHHHHHHHHHHHcCCCCceeee
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHE-----------SNVEQFINEVVILSQINHRNVVKL  201 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv~l  201 (221)
                      .++....++|.+.+.||+|+||.||++...++..||+|.+.....           ...+.+.+|+.+|++++||||+++
T Consensus        15 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   94 (362)
T 3pg1_A           15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGL   94 (362)
T ss_dssp             HHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred             HHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccce
Confidence            456667788999999999999999999977799999998754211           113679999999999999999999


Q ss_pred             eeEEEeC-----CeeEEEEEcccC
Q 036177          202 LGCCLET-----EVPLLVYEFILN  220 (221)
Q Consensus       202 ~g~~~~~-----~~~~lv~e~~~~  220 (221)
                      ++++...     ...++||||+++
T Consensus        95 ~~~~~~~~~~~~~~~~lv~e~~~~  118 (362)
T 3pg1_A           95 RDIFVHFEEPAMHKLYLVTELMRT  118 (362)
T ss_dssp             SEEEEECCTTTCCEEEEEEECCSE
T ss_pred             eeeEEeccCCCcceEEEEEccCCC
Confidence            9998653     257999999874

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.31  E-value=3.7e-12  Score=102.56  Aligned_cols=83  Identities=23%  Similarity=0.352  Sum_probs=66.7

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCC--------cccHHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH--------ESNVEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      ..++|.+.+.||+|+||.||++.. .++..||+|.+....        ......+.+|+.+|++++||||+++++++ ..
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-~~  211 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DA  211 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE-ES
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE-ec
Confidence            346788999999999999999985 457899999875421        12233589999999999999999999986 45


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      +..++||||+++|
T Consensus       212 ~~~~lv~e~~~~g  224 (419)
T 3i6u_A          212 EDYYIVLELMEGG  224 (419)
T ss_dssp             SEEEEEEECCTTC
T ss_pred             CceEEEEEcCCCC
Confidence            5679999999876

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.31  E-value=7.9e-12  Score=95.57  Aligned_cols=82  Identities=26%  Similarity=0.353  Sum_probs=68.0

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe----CCeeE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLE----TEVPL  212 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~----~~~~~  212 (221)
                      ..|.+.+.||+|+||.||++.. ..+..||+|.+..  .+......|.+|+.+|++++||||+++++++..    ....+
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            3467788999999999999985 4577899998764  344556789999999999999999999998765    34578


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus       106 lv~e~~~~~  114 (290)
T 1t4h_A          106 LVTELMTSG  114 (290)
T ss_dssp             EEEECCCSC
T ss_pred             EEEEecCCC
Confidence            999999875

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.30  E-value=5.3e-12  Score=98.09  Aligned_cols=91  Identities=24%  Similarity=0.458  Sum_probs=75.0

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEe
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLE  207 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~  207 (221)
                      +...++....++|.+.+.||+|+||.||++.. .++..||+|.+.... .....+.+|+.++.++ +||||+++++++..
T Consensus        14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            44556666778899999999999999999995 568899999986533 3346799999999999 89999999999876


Q ss_pred             ------CCeeEEEEEcccCC
Q 036177          208 ------TEVPLLVYEFILNG  221 (221)
Q Consensus       208 ------~~~~~lv~e~~~~G  221 (221)
                            .+..++||||+++|
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~  112 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAG  112 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTE
T ss_pred             ccCccccceEEEEEEcCCCC
Confidence                  45789999999864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.30  E-value=4.7e-12  Score=98.52  Aligned_cols=88  Identities=20%  Similarity=0.340  Sum_probs=71.0

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHH-HHHcCCCCceeeeeeEEEeCC
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVV-ILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~-~l~~l~h~niv~l~g~~~~~~  209 (221)
                      ..+....++|...+.||+|+||.||++.. .++..||+|.++.. .......+.+|.. +++.++||||+++++++...+
T Consensus        15 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~   94 (327)
T 3aln_A           15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG   94 (327)
T ss_dssp             EEECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS
T ss_pred             HhcccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC
Confidence            34556667888999999999999999996 46889999998653 3334456677776 677789999999999999999


Q ss_pred             eeEEEEEcccC
Q 036177          210 VPLLVYEFILN  220 (221)
Q Consensus       210 ~~~lv~e~~~~  220 (221)
                      ..+++|||+++
T Consensus        95 ~~~lv~e~~~~  105 (327)
T 3aln_A           95 DCWICMELMST  105 (327)
T ss_dssp             EEEEEECCCSE
T ss_pred             ceEEEEeecCC
Confidence            99999999874

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.30  E-value=4.5e-12  Score=96.94  Aligned_cols=86  Identities=28%  Similarity=0.384  Sum_probs=70.0

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      +..++..++|.+.+.||+|+||.||++...  ..+|+|.++.  ......+.|.+|+.+|++++||||++++++. ..+.
T Consensus        17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~   93 (289)
T 3og7_A           17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQ   93 (289)
T ss_dssp             -CCBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSS
T ss_pred             CCCccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCc
Confidence            345667788999999999999999999863  3599998865  3344567899999999999999999999965 4556


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+++|||+++|
T Consensus        94 ~~lv~e~~~~~  104 (289)
T 3og7_A           94 LAIVTQWCEGS  104 (289)
T ss_dssp             CEEEEECCCEE
T ss_pred             cEEEEEecCCC
Confidence            89999999754

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.30  E-value=8.5e-12  Score=95.67  Aligned_cols=83  Identities=24%  Similarity=0.364  Sum_probs=70.0

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCC---------cccHHHHHHHHHHHHcCC-CCceeeeeeEEEe
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH---------ESNVEQFINEVVILSQIN-HRNVVKLLGCCLE  207 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~  207 (221)
                      .++|...+.||+|+||.||++.. .++..||+|.++...         ....+.+.+|+.+|.++. ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            35688899999999999999996 467899999986432         122456889999999995 9999999999999


Q ss_pred             CCeeEEEEEcccCC
Q 036177          208 TEVPLLVYEFILNG  221 (221)
Q Consensus       208 ~~~~~lv~e~~~~G  221 (221)
                      .+..++||||+++|
T Consensus        96 ~~~~~lv~e~~~~~  109 (298)
T 1phk_A           96 NTFFFLVFDLMKKG  109 (298)
T ss_dssp             SSEEEEEEECCTTC
T ss_pred             CCeEEEEEeccCCC
Confidence            99999999999865

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.30  E-value=4.5e-12  Score=104.91  Aligned_cols=83  Identities=25%  Similarity=0.351  Sum_probs=71.6

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .++|...+.||+|+||.||++.. .++..||+|.+...   .......+.+|+.+|++++||||+++++++...+..++|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            36788889999999999999996 46899999998542   223456789999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus       264 mE~~~gg  270 (543)
T 3c4z_A          264 MTIMNGG  270 (543)
T ss_dssp             ECCCTTC
T ss_pred             EEeccCC
Confidence            9999876

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.29  E-value=5.3e-12  Score=96.25  Aligned_cols=83  Identities=24%  Similarity=0.389  Sum_probs=70.3

Q ss_pred             ccCccccceecccCceEEEEEEeC-CCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .++|.+.+.||+|+||.||++... ++..||+|.+...   .......+.+|+.+++.++||||+++++++...+..+++
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            356788899999999999999864 5778999987542   223356799999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        93 ~e~~~~~   99 (284)
T 2vgo_A           93 LEFAPRG   99 (284)
T ss_dssp             ECCCTTE
T ss_pred             EEeCCCC
Confidence            9999864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.29  E-value=7.2e-12  Score=97.47  Aligned_cols=83  Identities=29%  Similarity=0.558  Sum_probs=67.2

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcE--EEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRI--VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~--vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  213 (221)
                      .++|.+.+.||+|+||.||++.. .++..  +++|.++. ......+.+.+|+.+|.++ +||||+++++++...+..++
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  103 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL  103 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence            35677889999999999999985 34554  48998765 3444556799999999999 99999999999999999999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ||||+++|
T Consensus       104 v~e~~~~~  111 (327)
T 1fvr_A          104 AIEYAPHG  111 (327)
T ss_dssp             EECCCTTC
T ss_pred             EEecCCCC
Confidence            99999875

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.29  E-value=5.8e-12  Score=96.20  Aligned_cols=85  Identities=18%  Similarity=0.267  Sum_probs=67.3

Q ss_pred             hhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC-Cccc-HHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESN-VEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~-~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      +...++|.+.+.||+|+||.||++.. .++..||+|.++.. .... .+.+..+...++.++||||+++++++...+..+
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~   82 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW   82 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEE
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEE
Confidence            44567788899999999999999995 57889999998653 2222 333455555678889999999999999999999


Q ss_pred             EEEEcccC
Q 036177          213 LVYEFILN  220 (221)
Q Consensus       213 lv~e~~~~  220 (221)
                      +||||+++
T Consensus        83 lv~e~~~~   90 (290)
T 3fme_A           83 ICMELMDT   90 (290)
T ss_dssp             EEEECCSE
T ss_pred             EEEehhcc
Confidence            99999874

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.29  E-value=5e-12  Score=97.26  Aligned_cols=82  Identities=23%  Similarity=0.348  Sum_probs=67.2

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC----CcccHHHHHHHHHHHHcCCCCceeeeeeEEE--eCCeeE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV----HESNVEQFINEVVILSQINHRNVVKLLGCCL--ETEVPL  212 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~--~~~~~~  212 (221)
                      ++|.+.+.||+|+||.||++.. .++..+|+|.++..    .......+.+|+.++++++||||+++++++.  ..+..+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            5688899999999999999995 46789999988642    2334577999999999999999999999984  345789


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus        85 lv~e~~~~~   93 (305)
T 2wtk_C           85 MVMEYCVCG   93 (305)
T ss_dssp             EEEECCSEE
T ss_pred             EEehhccCC
Confidence            999999754

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.29  E-value=5.6e-12  Score=107.45  Aligned_cols=83  Identities=20%  Similarity=0.344  Sum_probs=70.3

Q ss_pred             ccCccccceecccCceEEEEEEeC--CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe-----
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT--DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV-----  210 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~--~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~-----  210 (221)
                      .++|.+.+.||+|+||.||++...  ++..||+|.+.. ........|.+|+.+|.+++||||+++++++...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            367888999999999999999864  588999998865 334455679999999999999999999999887654     


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+|||||+++|
T Consensus       159 ~~lv~E~~~g~  169 (681)
T 2pzi_A          159 GYIVMEYVGGQ  169 (681)
T ss_dssp             EEEEEECCCCE
T ss_pred             eEEEEEeCCCC
Confidence            69999999864

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.28  E-value=9.9e-12  Score=95.35  Aligned_cols=80  Identities=34%  Similarity=0.527  Sum_probs=66.9

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++|...+.||+|+||.||++... ++..||+|.++..  .......+.+|+.++++++||||+++++++...+..+++||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            46778899999999999999864 6889999988652  23334678999999999999999999999999999999999


Q ss_pred             ccc
Q 036177          217 FIL  219 (221)
Q Consensus       217 ~~~  219 (221)
                      |++
T Consensus        83 ~~~   85 (299)
T 2r3i_A           83 FLH   85 (299)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            986

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.28  E-value=1e-11  Score=105.22  Aligned_cols=88  Identities=28%  Similarity=0.506  Sum_probs=72.7

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeCC----CcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTD----GRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLE  207 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~----~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  207 (221)
                      .++....++|.+.+.||+|+||.||+|.+..    +..||+|.++. ......+.|.+|+.+|++++||||+++++++. 
T Consensus       383 ~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-  461 (656)
T 2j0j_A          383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-  461 (656)
T ss_dssp             GGTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred             cccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-
Confidence            4556667788999999999999999998632    45799998875 33444578999999999999999999999874 


Q ss_pred             CCeeEEEEEcccCC
Q 036177          208 TEVPLLVYEFILNG  221 (221)
Q Consensus       208 ~~~~~lv~e~~~~G  221 (221)
                      .+..++||||+++|
T Consensus       462 ~~~~~lv~E~~~~g  475 (656)
T 2j0j_A          462 ENPVWIIMELCTLG  475 (656)
T ss_dssp             SSSCEEEEECCTTC
T ss_pred             cCceEEEEEcCCCC
Confidence            45689999999876

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.28  E-value=7.1e-12  Score=95.65  Aligned_cols=82  Identities=38%  Similarity=0.592  Sum_probs=66.9

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCccc-------HHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESN-------VEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      ..++|.+.+.||+|+||.||++.. .++..||+|.+.......       .+.|.+|+.++++++||||+++++++... 
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-   95 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-   95 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT-
T ss_pred             hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC-
Confidence            346688899999999999999995 568899999886422211       16799999999999999999999987544 


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                       .+++|||+++|
T Consensus        96 -~~lv~e~~~~~  106 (287)
T 4f0f_A           96 -PRMVMEFVPCG  106 (287)
T ss_dssp             -TEEEEECCTTC
T ss_pred             -CeEEEEecCCC
Confidence             37999999865

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.28  E-value=1.1e-11  Score=95.77  Aligned_cols=82  Identities=27%  Similarity=0.503  Sum_probs=65.8

Q ss_pred             hccCccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ..+.|.+.+.||+|+||.||++... ++..||+|.+....  ....+.+|+.+|..++||||+++++++...+..+++||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            4567888999999999999999864 58899999886532  34679999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus       105 ~~~~~  109 (314)
T 3com_A          105 YCGAG  109 (314)
T ss_dssp             CCTTE
T ss_pred             cCCCC
Confidence            99764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.28  E-value=8.8e-12  Score=97.07  Aligned_cols=81  Identities=26%  Similarity=0.592  Sum_probs=62.6

Q ss_pred             cCccccceecccCceEEEEEEeC-CCc----EEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGR----IVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~----~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      ++|...+.||+|+||.||++... ++.    .||+|.++. ........|.+|+.+|++++||||+++++++.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            55777899999999999999853 343    468888764 34455678999999999999999999999998754 689


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ++||+++|
T Consensus        94 v~e~~~~g  101 (327)
T 3poz_A           94 ITQLMPFG  101 (327)
T ss_dssp             EEECCTTC
T ss_pred             EEEecCCC
Confidence            99999876

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.28  E-value=2.1e-12  Score=100.44  Aligned_cols=81  Identities=28%  Similarity=0.425  Sum_probs=66.6

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCC-cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|...+.||+|+||.||++... ++..||+|.++... ......+.+|+.+|++++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            45778899999999999999964 68899999886522 22223567899999999999999999999999999999999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus        82 ~~~   84 (324)
T 3mtl_A           82 LDK   84 (324)
T ss_dssp             CSE
T ss_pred             ccc
Confidence            863

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.28  E-value=5.8e-13  Score=104.11  Aligned_cols=82  Identities=24%  Similarity=0.409  Sum_probs=66.1

Q ss_pred             ccCccccceecccCceEEEEEEeCCCcEEEEEeccCC--------CcccHHHHHHHHHHHHcCC---------CCceeee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSV--------HESNVEQFINEVVILSQIN---------HRNVVKL  201 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~--------~~~~~~~~~~e~~~l~~l~---------h~niv~l  201 (221)
                      .++|.+.+.||+|+||.||++.. ++..||+|.++..        .....+.+.+|+.+|++++         ||||+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            45677889999999999999998 7899999998642        2233477999999998885         8888888


Q ss_pred             eeEEE------------------------------eCCeeEEEEEcccCC
Q 036177          202 LGCCL------------------------------ETEVPLLVYEFILNG  221 (221)
Q Consensus       202 ~g~~~------------------------------~~~~~~lv~e~~~~G  221 (221)
                      .++..                              ..+..+|||||+++|
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g  147 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGG  147 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCC
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCC
Confidence            77653                              156889999999876

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.28  E-value=6.6e-12  Score=98.55  Aligned_cols=82  Identities=27%  Similarity=0.418  Sum_probs=64.6

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc-----ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE-----SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      .++|...+.||+|+||.||++.. .++..||+|.++....     .....+.+|+.+++.++||||+++++++...+..+
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence            45688899999999999999995 4588999999864221     11346889999999999999999999999888999


Q ss_pred             EEEEcccC
Q 036177          213 LVYEFILN  220 (221)
Q Consensus       213 lv~e~~~~  220 (221)
                      +||||+++
T Consensus        89 lv~e~~~~   96 (346)
T 1ua2_A           89 LVFDFMET   96 (346)
T ss_dssp             EEEECCSE
T ss_pred             EEEEcCCC
Confidence            99999874

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.27  E-value=4.6e-12  Score=100.51  Aligned_cols=81  Identities=36%  Similarity=0.635  Sum_probs=66.5

Q ss_pred             CccccceecccCceEEEEEEeC--CC--cEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe-CCeeEEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLT--DG--RIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLE-TEVPLLV  214 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~--~~--~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~~~lv  214 (221)
                      .|.+.+.||+|+||.||++.+.  ++  ..+|+|.++. ......+.|.+|+.+|++++||||+++++++.. .+..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            3566789999999999999852  22  3589998865 344556789999999999999999999999765 4578999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus       170 ~e~~~~g  176 (373)
T 3c1x_A          170 LPYMKHG  176 (373)
T ss_dssp             EECCTTC
T ss_pred             EECCCCC
Confidence            9999876

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.27  E-value=1.1e-11  Score=94.27  Aligned_cols=85  Identities=33%  Similarity=0.519  Sum_probs=69.4

Q ss_pred             hhhccCccccceecccCceEEEEEEeCC----CcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGMLTD----GRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~~~----~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ....++|.+.+.||+|+||.||++.+..    +..||+|.++.. .....+.|.+|+.++++++||||+++++++. .+.
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~   86 (281)
T 3cc6_A            8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EEP   86 (281)
T ss_dssp             SCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-SSS
T ss_pred             eecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCC
Confidence            4456778889999999999999998532    235999998753 4445678999999999999999999999875 446


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+++|||+++|
T Consensus        87 ~~~v~e~~~~~   97 (281)
T 3cc6_A           87 TWIIMELYPYG   97 (281)
T ss_dssp             CEEEEECCTTC
T ss_pred             CEEEEecCCCC
Confidence            78999999865

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.27  E-value=9.6e-12  Score=98.56  Aligned_cols=82  Identities=26%  Similarity=0.376  Sum_probs=68.9

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC------
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE------  209 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------  209 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.+..  ........+.+|+.+|+.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            36788899999999999999984 4688999999864  23344567999999999999999999999987654      


Q ss_pred             eeEEEEEcccC
Q 036177          210 VPLLVYEFILN  220 (221)
Q Consensus       210 ~~~lv~e~~~~  220 (221)
                      ..++||||+++
T Consensus       104 ~~~lv~e~~~~  114 (371)
T 2xrw_A          104 DVYIVMELMDA  114 (371)
T ss_dssp             EEEEEEECCSE
T ss_pred             ceEEEEEcCCC
Confidence            67999999874

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.27  E-value=1.5e-11  Score=95.15  Aligned_cols=81  Identities=27%  Similarity=0.307  Sum_probs=66.4

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccC--CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKS--VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|...+.||+|+||+||++... ++..||+|.+..  ........+..|+..+.++ +||||+++++++...+..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            56888999999999999999964 689999998764  2333345566777666665 9999999999999999999999


Q ss_pred             EcccC
Q 036177          216 EFILN  220 (221)
Q Consensus       216 e~~~~  220 (221)
                      ||+.+
T Consensus       137 e~~~~  141 (311)
T 3p1a_A          137 ELCGP  141 (311)
T ss_dssp             ECCCC
T ss_pred             eccCC
Confidence            99853

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.27  E-value=7.2e-12  Score=98.65  Aligned_cols=84  Identities=20%  Similarity=0.307  Sum_probs=71.2

Q ss_pred             hccCccccceecccCceEEEEEEeC-CCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  212 (221)
                      ..++|.+.+.||+|+||.||++... ++..||+|.++..   .....+.+.+|..+|..+ +||||+++++++...+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            3467888999999999999999964 4788999998642   234456789999999988 8999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus        98 lv~E~~~gg  106 (353)
T 2i0e_A           98 FVMEYVNGG  106 (353)
T ss_dssp             EEEECCCSC
T ss_pred             EEEeCCCCC
Confidence            999999876

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.27  E-value=9.7e-12  Score=95.39  Aligned_cols=82  Identities=34%  Similarity=0.579  Sum_probs=66.8

Q ss_pred             cCccccceecccCceEEEEEEeCC----CcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe-CCeeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTD----GRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLE-TEVPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~----~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-~~~~~l  213 (221)
                      ..|.+.+.||+|+||.||++...+    ...+|+|.++. ......+.|.+|+.++++++||||+++++++.. .+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            446778999999999999998532    23589998875 344556789999999999999999999998755 457899


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      +|||+++|
T Consensus       105 v~e~~~~~  112 (298)
T 3f66_A          105 VLPYMKHG  112 (298)
T ss_dssp             EEECCTTC
T ss_pred             EEeCCCCC
Confidence            99999875

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.27  E-value=9.5e-12  Score=96.22  Aligned_cols=80  Identities=26%  Similarity=0.412  Sum_probs=63.9

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEE------------
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL------------  206 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~------------  206 (221)
                      ++|...+.||+|+||.||++... .+..||+|.+........+.+.+|+.++++++||||+++++++.            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            56788899999999999999964 48899999987666666788999999999999999999998873            


Q ss_pred             --eCCeeEEEEEccc
Q 036177          207 --ETEVPLLVYEFIL  219 (221)
Q Consensus       207 --~~~~~~lv~e~~~  219 (221)
                        .....+++|||++
T Consensus        91 ~~~~~~~~lv~e~~~  105 (320)
T 2i6l_A           91 LTELNSVYIVQEYME  105 (320)
T ss_dssp             CCSCSEEEEEEECCS
T ss_pred             ccccCceeEEeeccC
Confidence              3357899999986

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.27  E-value=8.7e-12  Score=95.64  Aligned_cols=81  Identities=30%  Similarity=0.522  Sum_probs=68.1

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe-----------
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE-----------  207 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-----------  207 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.++. .....+.+.+|+.++++++||||+++++++..           
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            4577789999999999999995 4688999998854 23445779999999999999999999998765           


Q ss_pred             --CCeeEEEEEcccCC
Q 036177          208 --TEVPLLVYEFILNG  221 (221)
Q Consensus       208 --~~~~~lv~e~~~~G  221 (221)
                        .+..+++|||+++|
T Consensus        85 ~~~~~~~lv~e~~~~~  100 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENG  100 (303)
T ss_dssp             -CEEEEEEEEECCCSC
T ss_pred             ccCCceEEEEecCCCC
Confidence              34678999999875

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.27  E-value=9e-12  Score=100.70  Aligned_cols=81  Identities=22%  Similarity=0.409  Sum_probs=68.9

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC-----Ce
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLET-----EV  210 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~  210 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.++.  ........+.+|+.+|++++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            35788899999999999999985 4578899999865  3334457899999999999999999999998765     56


Q ss_pred             eEEEEEccc
Q 036177          211 PLLVYEFIL  219 (221)
Q Consensus       211 ~~lv~e~~~  219 (221)
                      .++||||+.
T Consensus       105 ~~lv~e~~~  113 (432)
T 3n9x_A          105 LYIVLEIAD  113 (432)
T ss_dssp             EEEEEECCS
T ss_pred             EEEEEecCC
Confidence            899999986

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.26  E-value=5.1e-12  Score=100.24  Aligned_cols=84  Identities=19%  Similarity=0.322  Sum_probs=61.8

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHH-HHcCCCCceeeeeeEEEeCCeeE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVI-LSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~-l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      ..++|.+.+.||+|+||.||++.. .++..+|+|.++..   .......+.+|..+ ++.++||||+++++.+...+..+
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~  115 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY  115 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence            346788899999999999999995 45788999998642   22334557777776 56789999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus       116 lv~E~~~gg  124 (373)
T 2r5t_A          116 FVLDYINGG  124 (373)
T ss_dssp             EEEECCCSC
T ss_pred             EEEeCCCCC
Confidence            999999876

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.26  E-value=9.2e-12  Score=96.68  Aligned_cols=81  Identities=23%  Similarity=0.346  Sum_probs=64.4

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCC--------cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH--------ESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.+....        ......+.+|+.+|++++||||+++++++.... 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            4678889999999999999985 457899999875421        122346899999999999999999999986554 


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++||||+++|
T Consensus        89 ~~lv~e~~~~~   99 (322)
T 2ycf_A           89 YYIVLELMEGG   99 (322)
T ss_dssp             EEEEEECCTTE
T ss_pred             eEEEEecCCCC
Confidence            79999999864

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.26  E-value=2.2e-11  Score=93.45  Aligned_cols=79  Identities=20%  Similarity=0.391  Sum_probs=65.2

Q ss_pred             ccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHc--CCCCceeeeeeEEEeC----CeeE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQ--INHRNVVKLLGCCLET----EVPL  212 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~g~~~~~----~~~~  212 (221)
                      .++|.+.+.||+|+||.||++.. ++..||+|.+..   .....+.+|.+++..  ++||||+++++.+...    ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc---ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            45688899999999999999998 789999999854   334567778877776  7999999999987653    4578


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      ++|||+++|
T Consensus        83 lv~e~~~~g   91 (301)
T 3q4u_A           83 LITHYHEMG   91 (301)
T ss_dssp             EEECCCTTC
T ss_pred             EehhhccCC
Confidence            999999876

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.26  E-value=2.6e-12  Score=100.45  Aligned_cols=82  Identities=26%  Similarity=0.330  Sum_probs=69.6

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc--------ccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE--------SNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.++....        .....+.+|+.+|++++||||+++++++...+.
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            5688899999999999999984 5688999998865321        134468899999999999999999999999999


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++||||+..|
T Consensus       104 ~~lv~e~~~~g  114 (335)
T 3dls_A          104 FQLVMEKHGSG  114 (335)
T ss_dssp             EEEEEECCTTS
T ss_pred             EEEEEEeCCCC
Confidence            99999998765

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.26  E-value=1.6e-11  Score=96.66  Aligned_cols=88  Identities=24%  Similarity=0.269  Sum_probs=73.6

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-----CCceeeeee
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-----HRNVVKLLG  203 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~g  203 (221)
                      ++..+.....++|.+.+.||+|+||.||++.. .++..||+|.++. .......+..|+.++..++     ||||+++++
T Consensus        25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~  103 (360)
T 3llt_A           25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIVKYHG  103 (360)
T ss_dssp             CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred             eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence            34444455567899999999999999999995 5688999999864 2334566888999999886     999999999


Q ss_pred             EEEeCCeeEEEEEcc
Q 036177          204 CCLETEVPLLVYEFI  218 (221)
Q Consensus       204 ~~~~~~~~~lv~e~~  218 (221)
                      ++...+..++||||+
T Consensus       104 ~~~~~~~~~lv~e~~  118 (360)
T 3llt_A          104 KFMYYDHMCLIFEPL  118 (360)
T ss_dssp             EEEETTEEEEEECCC
T ss_pred             eeeECCeeEEEEcCC
Confidence            999999999999998

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.26  E-value=1.4e-12  Score=100.96  Aligned_cols=90  Identities=21%  Similarity=0.400  Sum_probs=76.1

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLE  207 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  207 (221)
                      ....++.+..++|.+.+.||+|+||.||++....  .+|+|.++.  ......+.|.+|+.++++++||||+++++++..
T Consensus        23 ~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~  100 (319)
T 2y4i_B           23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS  100 (319)
T ss_dssp             CCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC
T ss_pred             cccccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence            4556778888999999999999999999998743  489998764  233345668899999999999999999999999


Q ss_pred             CCeeEEEEEcccCC
Q 036177          208 TEVPLLVYEFILNG  221 (221)
Q Consensus       208 ~~~~~lv~e~~~~G  221 (221)
                      .+..+++|||+++|
T Consensus       101 ~~~~~iv~e~~~~~  114 (319)
T 2y4i_B          101 PPHLAIITSLCKGR  114 (319)
T ss_dssp             SSCEEEECBCCCSE
T ss_pred             CCceEEEeecccCC
Confidence            98999999999764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.26  E-value=2.2e-11  Score=94.79  Aligned_cols=79  Identities=28%  Similarity=0.479  Sum_probs=68.6

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-CCceeeeeeEEEe--CCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-HRNVVKLLGCCLE--TEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~--~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.++.   ...+.+.+|+.+|.+++ ||||+++++++..  ....+++|
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            5688899999999999999984 5688999999864   33567999999999996 9999999999987  56789999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus       113 e~~~~~  118 (330)
T 3nsz_A          113 EHVNNT  118 (330)
T ss_dssp             ECCCCC
T ss_pred             eccCch
Confidence            999875

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.26  E-value=1.1e-11  Score=97.99  Aligned_cols=86  Identities=16%  Similarity=0.268  Sum_probs=71.8

Q ss_pred             hhhhhhccCccccceecccCceEEEEEE------eCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC---CCceeeeee
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGM------LTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN---HRNVVKLLG  203 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~------~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~g  203 (221)
                      .++....++|.+.+.||+|+||.||++.      ...+..||+|.++..   ...++.+|+.++..++   |+||+++++
T Consensus        58 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~  134 (365)
T 3e7e_A           58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYS  134 (365)
T ss_dssp             CEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred             eeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence            4455666788999999999999999994      346788999998653   3456888888888886   999999999


Q ss_pred             EEEeCCeeEEEEEcccCC
Q 036177          204 CCLETEVPLLVYEFILNG  221 (221)
Q Consensus       204 ~~~~~~~~~lv~e~~~~G  221 (221)
                      .+...+..++||||+++|
T Consensus       135 ~~~~~~~~~lv~e~~~~g  152 (365)
T 3e7e_A          135 AHLFQNGSVLVGELYSYG  152 (365)
T ss_dssp             EEECSSCEEEEECCCCSC
T ss_pred             eeecCCCcEEEEeccCCC
Confidence            999999999999999876

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.25  E-value=5.4e-12  Score=102.69  Aligned_cols=80  Identities=29%  Similarity=0.485  Sum_probs=59.3

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC-----Cee
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLET-----EVP  211 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~~  211 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.+..  ......+.+.+|+.+|++++||||+++++++...     ...
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            6788899999999999999984 4688999998865  3334457799999999999999999999998543     468


Q ss_pred             EEEEEccc
Q 036177          212 LLVYEFIL  219 (221)
Q Consensus       212 ~lv~e~~~  219 (221)
                      ++||||+.
T Consensus       133 ~lv~e~~~  140 (458)
T 3rp9_A          133 YVVLEIAD  140 (458)
T ss_dssp             EEEECCCS
T ss_pred             EEEEeccc
Confidence            99999985

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.25  E-value=8.6e-12  Score=97.80  Aligned_cols=79  Identities=24%  Similarity=0.299  Sum_probs=66.8

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      .++|.+.+.||+|+||.||++.. .++..+|+|.++....    .+.+|+.+|.++ +||||+++++++...+..++|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            35578889999999999999985 4588999999865332    245788888888 89999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        97 ~~~gg  101 (342)
T 2qr7_A           97 LMKGG  101 (342)
T ss_dssp             CCCSC
T ss_pred             CCCCC
Confidence            99876

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.25  E-value=1.9e-11  Score=93.72  Aligned_cols=80  Identities=28%  Similarity=0.481  Sum_probs=65.1

Q ss_pred             ccccceecccCceEEEEEEeC-CC---cEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee-EEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGMLT-DG---RIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP-LLVY  215 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~-~~---~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~-~lv~  215 (221)
                      +...+.||+|+||.||++... ++   ..+|+|.+.. ......+.|.+|+.++++++||||+++++++...+.. ++++
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            445689999999999999842 22   3699998875 3444567899999999999999999999999776554 8999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+.+|
T Consensus       103 e~~~~~  108 (298)
T 3pls_A          103 PYMCHG  108 (298)
T ss_dssp             CCCTTC
T ss_pred             ecccCC
Confidence            999775

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.25  E-value=2e-11  Score=95.03  Aligned_cols=74  Identities=23%  Similarity=0.267  Sum_probs=64.8

Q ss_pred             cceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-CCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          145 SRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .+.||+|+||.||++.. .++..||+|.+..   .....+.+|+.++..+. ||||+++++++......++||||+++|
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~   91 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG   91 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence            46899999999999995 4588999999854   23467889999999996 999999999999999999999999875

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.25  E-value=1.2e-11  Score=97.11  Aligned_cols=81  Identities=33%  Similarity=0.457  Sum_probs=67.9

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC--------
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLET--------  208 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~--------  208 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.+..  ........+.+|+.+|+.++||||+++++++...        
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            5688899999999999999996 5688999998754  2333356789999999999999999999998763        


Q ss_pred             CeeEEEEEcccC
Q 036177          209 EVPLLVYEFILN  220 (221)
Q Consensus       209 ~~~~lv~e~~~~  220 (221)
                      +..++||||+++
T Consensus        97 ~~~~lv~e~~~~  108 (351)
T 3mi9_A           97 GSIYLVFDFCEH  108 (351)
T ss_dssp             CEEEEEEECCSE
T ss_pred             ceEEEEEeccCC
Confidence            468999999874

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.25  E-value=2e-11  Score=96.54  Aligned_cols=82  Identities=24%  Similarity=0.384  Sum_probs=69.9

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCCc--------ccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCC
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHE--------SNVEQFINEVVILSQI-NHRNVVKLLGCCLETE  209 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~  209 (221)
                      ++|.+.+.||+|+||.||++... +|..||||.++....        ...+.+.+|+.++.++ +||||+++++++...+
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  173 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS  173 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence            56788899999999999999964 689999998865321        1145688999999999 8999999999999999


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..++||||+++|
T Consensus       174 ~~~lv~e~~~g~  185 (365)
T 2y7j_A          174 FMFLVFDLMRKG  185 (365)
T ss_dssp             EEEEEECCCTTC
T ss_pred             EEEEEEEeCCCC
Confidence            999999999875

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.24  E-value=1.2e-11  Score=98.34  Aligned_cols=68  Identities=24%  Similarity=0.375  Sum_probs=53.6

Q ss_pred             hhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE  207 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  207 (221)
                      +...++|.+.+.||+|+||.||++.. .++..||+|.+.....    ...+|+.+|+.++||||+++++++..
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~   71 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYT   71 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeee
Confidence            34567788999999999999999984 5789999998864322    23479999999999999999998854

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.24  E-value=8.7e-12  Score=98.23  Aligned_cols=84  Identities=23%  Similarity=0.350  Sum_probs=71.3

Q ss_pred             hccCccccceecccCceEEEEEEe----CCCcEEEEEeccCC----CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeC
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSV----HESNVEQFINEVVILSQI-NHRNVVKLLGCCLET  208 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~----~~~~~vavk~~~~~----~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~  208 (221)
                      ..++|.+.+.||+|+||.||++..    ..+..||+|.++..    .....+.+.+|+.+|..+ +||||+++++++...
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  131 (355)
T 1vzo_A           52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE  131 (355)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred             cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence            346788899999999999999986    36889999998642    223346688999999999 799999999999999


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      +..++||||+++|
T Consensus       132 ~~~~lv~e~~~~~  144 (355)
T 1vzo_A          132 TKLHLILDYINGG  144 (355)
T ss_dssp             TEEEEEECCCCSC
T ss_pred             ceEEEEeecCCCC
Confidence            9999999999875

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.23  E-value=2.6e-11  Score=94.41  Aligned_cols=81  Identities=20%  Similarity=0.290  Sum_probs=68.2

Q ss_pred             Ccccc-ceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEE
Q 036177          141 NYKVS-RIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       141 ~~~~~-~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      .|.+. +.||+|+||.||++.. .++..||+|.++.  ........+.+|+.++..+ +||||+++++++...+..++||
T Consensus        29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~  108 (327)
T 3lm5_A           29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILIL  108 (327)
T ss_dssp             HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEE
Confidence            34444 7899999999999985 4588999998865  3344467899999999999 5799999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus       109 e~~~~~  114 (327)
T 3lm5_A          109 EYAAGG  114 (327)
T ss_dssp             ECCTTE
T ss_pred             EecCCC
Confidence            999875

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.23  E-value=1.7e-11  Score=96.01  Aligned_cols=82  Identities=20%  Similarity=0.367  Sum_probs=70.4

Q ss_pred             hhccCccccceecccCceEEEEEEeCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCC--CceeeeeeEEEeCCeeE
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINH--RNVVKLLGCCLETEVPL  212 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h--~niv~l~g~~~~~~~~~  212 (221)
                      ...+.|.+.+.||+|+||.||++...++..||+|.+..  ........|.+|+.+|.+++|  |||+++++++...+..+
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~   85 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY   85 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence            34456888999999999999999987889999998864  334445789999999999976  99999999999999999


Q ss_pred             EEEEcc
Q 036177          213 LVYEFI  218 (221)
Q Consensus       213 lv~e~~  218 (221)
                      +||||.
T Consensus        86 lv~e~~   91 (343)
T 3dbq_A           86 MVMECG   91 (343)
T ss_dssp             EEECCC
T ss_pred             EEEeCC
Confidence            999964

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.22  E-value=1.9e-11  Score=92.96  Aligned_cols=78  Identities=33%  Similarity=0.532  Sum_probs=65.6

Q ss_pred             cCccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe-----------
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE-----------  207 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~-----------  207 (221)
                      .+|...+.||+|+||.||++... ++..||+|.++...    ..+.+|+.++.+++||||+++++++..           
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence            45777899999999999999964 68999999986533    357899999999999999999998754           


Q ss_pred             -----CCeeEEEEEcccCC
Q 036177          208 -----TEVPLLVYEFILNG  221 (221)
Q Consensus       208 -----~~~~~lv~e~~~~G  221 (221)
                           ....+++|||+++|
T Consensus        87 ~~~~~~~~~~lv~e~~~~~  105 (284)
T 2a19_B           87 SSRSKTKCLFIQMEFCDKG  105 (284)
T ss_dssp             --CCEEEEEEEEECCCCSC
T ss_pred             ccccCcceEEEEEeccCCC
Confidence                 34578999999875

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.22  E-value=2.2e-11  Score=96.98  Aligned_cols=82  Identities=27%  Similarity=0.529  Sum_probs=61.6

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCC-CCceeeeeeEEEeCC--eeE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQIN-HRNVVKLLGCCLETE--VPL  212 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~--~~~  212 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.+..  ........+.+|+.+|..+. ||||+++++++...+  ..+
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~   87 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY   87 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence            35688899999999999999984 5688999998854  33445667899999999996 999999999987644  689


Q ss_pred             EEEEcccC
Q 036177          213 LVYEFILN  220 (221)
Q Consensus       213 lv~e~~~~  220 (221)
                      +||||+++
T Consensus        88 lv~e~~~~   95 (388)
T 3oz6_A           88 LVFDYMET   95 (388)
T ss_dssp             EEEECCSE
T ss_pred             EEecccCc
Confidence            99999973

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.22  E-value=1.1e-11  Score=96.61  Aligned_cols=86  Identities=24%  Similarity=0.346  Sum_probs=71.2

Q ss_pred             hhhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-CCceeeeeeEEEe----
Q 036177          134 DLEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-HRNVVKLLGCCLE----  207 (221)
Q Consensus       134 ~~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~----  207 (221)
                      .++....+|.+.+.||+|+||.||++.. .++..||+|.+........+.+.+|+.++.++. ||||+++++++..    
T Consensus        22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~  101 (337)
T 3ll6_A           22 TVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEE  101 (337)
T ss_dssp             EEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTT
T ss_pred             eeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccc
Confidence            3444556788899999999999999995 468899999986666666778999999999995 9999999999853    


Q ss_pred             ----CCeeEEEEEccc
Q 036177          208 ----TEVPLLVYEFIL  219 (221)
Q Consensus       208 ----~~~~~lv~e~~~  219 (221)
                          ....++++||+.
T Consensus       102 ~~~~~~~~~lv~e~~~  117 (337)
T 3ll6_A          102 SDTGQAEFLLLTELCK  117 (337)
T ss_dssp             STTSSEEEEEEEECCS
T ss_pred             cccCCceEEEEEEecC
Confidence                234789999986

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.22  E-value=1.3e-11  Score=96.05  Aligned_cols=82  Identities=23%  Similarity=0.474  Sum_probs=65.5

Q ss_pred             ccCccccceecccCceEEEEEEeC-CCc----EEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DGR----IVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~~----~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      .++|.+.+.||+|+||.||++... ++.    .|++|.+.. ........+.+|+.++++++||||+++++++. .+..+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~   90 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ   90 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence            356778899999999999999853 343    378887754 33344467889999999999999999999875 45688


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +|+||+++|
T Consensus        91 ~v~e~~~~~   99 (325)
T 3kex_A           91 LVTQYLPLG   99 (325)
T ss_dssp             EEEECCTTC
T ss_pred             EEEEeCCCC
Confidence            999999876

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.22  E-value=2.3e-11  Score=95.46  Aligned_cols=81  Identities=20%  Similarity=0.398  Sum_probs=68.3

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC-----Cee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET-----EVP  211 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~~  211 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.++. ........+.+|+.++++++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            46788899999999999999996 4688999999865 3334456789999999999999999999987654     578


Q ss_pred             EEEEEccc
Q 036177          212 LLVYEFIL  219 (221)
Q Consensus       212 ~lv~e~~~  219 (221)
                      +++|||+.
T Consensus        90 ~lv~e~~~   97 (353)
T 2b9h_A           90 YIIQELMQ   97 (353)
T ss_dssp             EEEECCCS
T ss_pred             EEEEeccC
Confidence            99999986

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.22  E-value=1.4e-11  Score=97.42  Aligned_cols=80  Identities=28%  Similarity=0.355  Sum_probs=61.3

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC------
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE------  209 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------  209 (221)
                      .++|...+.||+|+||.||++.. .++..||+|.+..  ........+.+|+.+|+.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46688899999999999999985 5689999999854  23334567899999999999999999999987653      


Q ss_pred             eeEEEEEcc
Q 036177          210 VPLLVYEFI  218 (221)
Q Consensus       210 ~~~lv~e~~  218 (221)
                      ..++||||+
T Consensus       104 ~~~lv~e~~  112 (367)
T 1cm8_A          104 DFYLVMPFM  112 (367)
T ss_dssp             CCEEEEECC
T ss_pred             eEEEEEecC
Confidence            459999998

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.21  E-value=2.5e-11  Score=96.17  Aligned_cols=81  Identities=26%  Similarity=0.397  Sum_probs=68.5

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee----
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP----  211 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~----  211 (221)
                      .++|...+.||+|+||.||++.. .++..||+|.+...  .......+.+|+.+++.++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            35788899999999999999985 46889999998652  333457799999999999999999999999876654    


Q ss_pred             --EEEEEccc
Q 036177          212 --LLVYEFIL  219 (221)
Q Consensus       212 --~lv~e~~~  219 (221)
                        +++|||+.
T Consensus       121 ~~~lv~e~~~  130 (371)
T 4exu_A          121 DFYLVMPFMQ  130 (371)
T ss_dssp             CCEEEEECCC
T ss_pred             eEEEEEcccc
Confidence              99999986

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.21  E-value=4.5e-11  Score=93.41  Aligned_cols=79  Identities=24%  Similarity=0.378  Sum_probs=68.0

Q ss_pred             ccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHc--CCCCceeeeeeEEEeCC----eeE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQ--INHRNVVKLLGCCLETE----VPL  212 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~g~~~~~~----~~~  212 (221)
                      .++|.+.+.||+|+||.||++.. ++..||+|.+..   .....+.+|.+++..  ++||||+++++++....    ..+
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~  116 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW  116 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred             cccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeE
Confidence            45688899999999999999998 689999999854   334678899999887  79999999999988765    789


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus       117 lv~e~~~~g  125 (342)
T 1b6c_B          117 LVSDYHEHG  125 (342)
T ss_dssp             EEECCCTTC
T ss_pred             EEEeecCCC
Confidence            999999875

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.20  E-value=3.8e-11  Score=94.85  Aligned_cols=82  Identities=21%  Similarity=0.301  Sum_probs=68.5

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC-----Cee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET-----EVP  211 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~~  211 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.+.. ........+.+|+.+|.+++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            35688899999999999999985 4678899999875 3334457799999999999999999999998654     367


Q ss_pred             EEEEEcccC
Q 036177          212 LLVYEFILN  220 (221)
Q Consensus       212 ~lv~e~~~~  220 (221)
                      ++++||+.+
T Consensus       106 ~iv~e~~~~  114 (364)
T 3qyz_A          106 YIVQDLMET  114 (364)
T ss_dssp             EEEEECCSE
T ss_pred             EEEEcccCc
Confidence            999999863

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.20  E-value=2.7e-11  Score=94.38  Aligned_cols=77  Identities=19%  Similarity=0.209  Sum_probs=66.5

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.+.....  ...+.+|+.+++.+ +||||++++++....+..++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            5688899999999999999984 5788999998864322  24688999999999 999999999999999999999999


Q ss_pred             c
Q 036177          218 I  218 (221)
Q Consensus       218 ~  218 (221)
                      +
T Consensus        87 ~   87 (330)
T 2izr_A           87 L   87 (330)
T ss_dssp             C
T ss_pred             C
Confidence            9

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.19  E-value=2.5e-11  Score=95.55  Aligned_cols=86  Identities=27%  Similarity=0.313  Sum_probs=59.1

Q ss_pred             hhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe---
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV---  210 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~---  210 (221)
                      .....++|.+.+.||+|+||.||++.. .++..||+|.+.... .....+.+++..++.++||||+++++++...+.   
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~   96 (360)
T 3e3p_A           18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDR   96 (360)
T ss_dssp             HHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCT
T ss_pred             chhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccc
Confidence            344567899999999999999999996 468899999875422 223457788888999999999999999876433   


Q ss_pred             ----eEEEEEcccCC
Q 036177          211 ----PLLVYEFILNG  221 (221)
Q Consensus       211 ----~~lv~e~~~~G  221 (221)
                          .+++|||++++
T Consensus        97 ~~~~~~lv~e~~~~~  111 (360)
T 3e3p_A           97 RDIYLNVVMEYVPDT  111 (360)
T ss_dssp             TCEEEEEEEECCSCB
T ss_pred             cceeEEEEeeccccc
Confidence                78999999764

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.19  E-value=4e-11  Score=94.25  Aligned_cols=80  Identities=26%  Similarity=0.395  Sum_probs=67.2

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe------
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEV------  210 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~------  210 (221)
                      ++|...+.||+|+||.||++.. .++..||+|.+...  .......+.+|+.+++.++||||+++++++...+.      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            5678889999999999999985 46889999998652  33345679999999999999999999999877653      


Q ss_pred             eEEEEEccc
Q 036177          211 PLLVYEFIL  219 (221)
Q Consensus       211 ~~lv~e~~~  219 (221)
                      .+++|||+.
T Consensus       104 ~~lv~e~~~  112 (353)
T 3coi_A          104 FYLVMPFMQ  112 (353)
T ss_dssp             CEEEEECCS
T ss_pred             EEEEecccc
Confidence            499999986

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.19  E-value=5.1e-11  Score=95.01  Aligned_cols=80  Identities=20%  Similarity=0.379  Sum_probs=69.0

Q ss_pred             ccCccccceecccCceEEEEEEeCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCC--CCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKS--VHESNVEQFINEVVILSQIN--HRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~--h~niv~l~g~~~~~~~~~lv  214 (221)
                      ...|.+.+.||+|+||.||++....+..||+|.+..  ........|.+|+.+|.+++  ||||+++++++...+..+||
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  134 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  134 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence            345888999999999999999977789999998854  33445678999999999995  59999999999999999999


Q ss_pred             EEcc
Q 036177          215 YEFI  218 (221)
Q Consensus       215 ~e~~  218 (221)
                      ||+.
T Consensus       135 ~E~~  138 (390)
T 2zmd_A          135 MECG  138 (390)
T ss_dssp             EECC
T ss_pred             EecC
Confidence            9964

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.18  E-value=1e-11  Score=98.64  Aligned_cols=85  Identities=14%  Similarity=0.191  Sum_probs=65.5

Q ss_pred             hhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHH---HHHHcCCCCceeeee-----
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEV---VILSQINHRNVVKLL-----  202 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~---~~l~~l~h~niv~l~-----  202 (221)
                      +..+.++|.+.+.||+|+||.||++.. .++..||+|.++.   ......+.|.+|+   ..|++++||||++++     
T Consensus        68 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~  147 (377)
T 3byv_A           68 LGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF  147 (377)
T ss_dssp             SSCCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCC
T ss_pred             cCCCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhh
Confidence            344557788899999999999999994 5689999999863   3344567899999   556666899999998     


Q ss_pred             --eEEEeCC-----------------eeEEEEEccc
Q 036177          203 --GCCLETE-----------------VPLLVYEFIL  219 (221)
Q Consensus       203 --g~~~~~~-----------------~~~lv~e~~~  219 (221)
                        +++...+                 ..+|+|||+.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~  183 (377)
T 3byv_A          148 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ  183 (377)
T ss_dssp             CSEEEECTTSCSEEEC------CEEESEEEEEECCS
T ss_pred             hhhhhhccCCccccccccCCCceEEEEEEEEEeccC
Confidence              5444332                 2789999984

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.18  E-value=4.9e-11  Score=92.86  Aligned_cols=82  Identities=26%  Similarity=0.587  Sum_probs=67.0

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCc----EEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGR----IVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~----~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      .++|.+.+.||+|+||.||++.. .++.    .|++|.++. ........+.+|+.+|+.++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            35688899999999999999985 3343    368887754 44456778999999999999999999999987654 78


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +++||+++|
T Consensus        93 ~v~~~~~~g  101 (327)
T 3lzb_A           93 LITQLMPFG  101 (327)
T ss_dssp             EEECCCSSC
T ss_pred             EEEEecCCC
Confidence            899999875

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.18  E-value=8.2e-11  Score=91.67  Aligned_cols=80  Identities=23%  Similarity=0.399  Sum_probs=66.0

Q ss_pred             hccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC--CCCceeeeeeEEEeC----Cee
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI--NHRNVVKLLGCCLET----EVP  211 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~g~~~~~----~~~  211 (221)
                      ..++|.+.+.||+|+||.||++.. .+..||+|.+..   .....+.+|.+++..+  +||||+++++++...    ...
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  110 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFT---TEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL  110 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEG---GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred             cccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEec---cccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence            346788899999999999999998 589999998854   2334566777777655  999999999999887    678


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus       111 ~lv~e~~~~g  120 (337)
T 3mdy_A          111 YLITDYHENG  120 (337)
T ss_dssp             EEEECCCTTC
T ss_pred             EEEEeccCCC
Confidence            9999999876

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.17  E-value=4.2e-11  Score=91.43  Aligned_cols=83  Identities=29%  Similarity=0.479  Sum_probs=61.0

Q ss_pred             hccCccccceecccCceEEEEEEeC--CCc--EEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLT--DGR--IVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~--~~~--~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ..++|.+.+.||+|+||.||++.+.  ++.  .||+|.++..   .....+.|.+|+.++.+++||||+++++++.... 
T Consensus        16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-   94 (291)
T 1u46_A           16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-   94 (291)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred             chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence            3456888999999999999999852  233  6899988652   3345678999999999999999999999987654 


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++++||+++|
T Consensus        95 ~~~v~e~~~~~  105 (291)
T 1u46_A           95 MKMVTELAPLG  105 (291)
T ss_dssp             CEEEEECCTTC
T ss_pred             ceeeEecccCC
Confidence            78999999865

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.16  E-value=7.3e-11  Score=94.54  Aligned_cols=74  Identities=22%  Similarity=0.356  Sum_probs=57.3

Q ss_pred             cceecccCceEEEEEEeC---CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe--CCeeEEEEEccc
Q 036177          145 SRIIGQGGQGTVFKGMLT---DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE--TEVPLLVYEFIL  219 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~---~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv~e~~~  219 (221)
                      .++||+|+||.||++...   .+..||+|.+.....  ...+.+|+.+|++++||||+++++++..  ....++||||+.
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~  103 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE  103 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence            457999999999999964   467899999875322  3468899999999999999999999865  567899999986


Q ss_pred             C
Q 036177          220 N  220 (221)
Q Consensus       220 ~  220 (221)
                      +
T Consensus       104 ~  104 (405)
T 3rgf_A          104 H  104 (405)
T ss_dssp             E
T ss_pred             C
Confidence            4

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.16  E-value=5e-11  Score=96.34  Aligned_cols=82  Identities=21%  Similarity=0.252  Sum_probs=66.7

Q ss_pred             hhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  213 (221)
                      +.....+|...+.||+|+||.|+.....+++.||||.+.....   ..+.+|+.+|+++ +||||+++++.+......+|
T Consensus        19 ~~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l   95 (432)
T 3p23_A           19 VIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYI   95 (432)
T ss_dssp             EEETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEE
T ss_pred             EEEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEE
Confidence            3444556888899999999996544444789999999865332   2367899999999 89999999999999999999


Q ss_pred             EEEccc
Q 036177          214 VYEFIL  219 (221)
Q Consensus       214 v~e~~~  219 (221)
                      +|||++
T Consensus        96 v~E~~~  101 (432)
T 3p23_A           96 AIELCA  101 (432)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            999986

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.15  E-value=6.9e-11  Score=94.41  Aligned_cols=77  Identities=29%  Similarity=0.373  Sum_probs=62.6

Q ss_pred             cCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe------eEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV------PLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~------~~l  213 (221)
                      .+|...+.||+|+||.||++....+..+|+|++......    ..+|+.+|+.++||||+++++++...+.      .++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            458889999999999999999867777999987542221    2379999999999999999999865432      789


Q ss_pred             EEEcccC
Q 036177          214 VYEFILN  220 (221)
Q Consensus       214 v~e~~~~  220 (221)
                      ||||+++
T Consensus       116 v~e~~~~  122 (394)
T 4e7w_A          116 VLEYVPE  122 (394)
T ss_dssp             EEECCSE
T ss_pred             EeeccCc
Confidence            9999975

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.15  E-value=4.3e-11  Score=96.36  Aligned_cols=77  Identities=26%  Similarity=0.447  Sum_probs=62.1

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC----C--eeE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLET----E--VPL  212 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~----~--~~~  212 (221)
                      .+|...+.||+|+||.||++.. .++..||+|.+....    ..+.+|+.+|+.++||||+++++++...    +  ..+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            4578889999999999999996 458999999885422    2234799999999999999999987542    1  367


Q ss_pred             EEEEcccC
Q 036177          213 LVYEFILN  220 (221)
Q Consensus       213 lv~e~~~~  220 (221)
                      +||||+++
T Consensus       130 lv~e~~~~  137 (420)
T 1j1b_A          130 LVLDYVPE  137 (420)
T ss_dssp             EEEECCCE
T ss_pred             eehhcccc
Confidence            99999874

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.14  E-value=6.7e-11  Score=93.61  Aligned_cols=81  Identities=25%  Similarity=0.324  Sum_probs=63.8

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC------C
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLET------E  209 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~  209 (221)
                      .++|...+.||+|+||.||++.. .++..||+|.+..  ........+.+|+.+|+.++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            36788899999999999999984 5688999999865  2334456789999999999999999999998654      4


Q ss_pred             eeEEEEEccc
Q 036177          210 VPLLVYEFIL  219 (221)
Q Consensus       210 ~~~lv~e~~~  219 (221)
                      ..++++||+.
T Consensus       108 ~~~lv~e~~~  117 (367)
T 2fst_X          108 DVYLVTHLMG  117 (367)
T ss_dssp             CCEEEEECCC
T ss_pred             eEEEEecccC
Confidence            6799999983

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.13  E-value=5.7e-11  Score=101.04  Aligned_cols=84  Identities=20%  Similarity=0.302  Sum_probs=70.8

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeE
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~  212 (221)
                      ..++|.+.+.||+|+||.||++.. .++..||+|.++..   .....+.+.+|..+|..+ +||||+.+++++...+.++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            346788899999999999999995 45788999998641   233456788999999988 8999999999998889999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      |||||+++|
T Consensus       419 lV~E~~~gg  427 (674)
T 3pfq_A          419 FVMEYVNGG  427 (674)
T ss_dssp             EEEECCCSC
T ss_pred             EEEeCcCCC
Confidence            999999876

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.13  E-value=7.8e-11  Score=91.41  Aligned_cols=84  Identities=33%  Similarity=0.525  Sum_probs=65.7

Q ss_pred             hhccCccccceecccCceEEEEEEe--CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcC---CCCceeeeeeEEE---
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML--TDGRIVAVKKSKS--VHESNVEQFINEVVILSQI---NHRNVVKLLGCCL---  206 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~--~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~---  206 (221)
                      ...++|.+.+.||+|+||.||++..  .++..||+|.++.  ........+.+|+.+++.+   +||||+++++++.   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            3456788899999999999999986  4578899998754  2222334577888777766   8999999999987   


Q ss_pred             --eCCeeEEEEEcccC
Q 036177          207 --ETEVPLLVYEFILN  220 (221)
Q Consensus       207 --~~~~~~lv~e~~~~  220 (221)
                        .....+++|||+++
T Consensus        88 ~~~~~~~~lv~e~~~~  103 (326)
T 1blx_A           88 TDRETKLTLVFEHVDQ  103 (326)
T ss_dssp             CSSEEEEEEEEECCSC
T ss_pred             cCCCceEEEEEecCCC
Confidence              34568899999873

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.13  E-value=8.9e-11  Score=90.72  Aligned_cols=86  Identities=16%  Similarity=0.290  Sum_probs=62.0

Q ss_pred             hhhhhccCccccceecccCceEEEEEEeC-CCcEEEEEeccCCC-ccc-HHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          134 DLEKATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVH-ESN-VEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       134 ~~~~~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~-~~~-~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      .+....++|...+.||+|+||.||++... ++..||+|.+.... ... .+.+..+..+++.++||||+++++++...+.
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~   98 (318)
T 2dyl_A           19 RYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTD   98 (318)
T ss_dssp             EEECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             hhhhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCc
Confidence            34445567888999999999999999964 68899999986532 222 2334455567888899999999999999999


Q ss_pred             eEEEEEccc
Q 036177          211 PLLVYEFIL  219 (221)
Q Consensus       211 ~~lv~e~~~  219 (221)
                      .+++|||+.
T Consensus        99 ~~lv~e~~~  107 (318)
T 2dyl_A           99 VFIAMELMG  107 (318)
T ss_dssp             EEEEECCCS
T ss_pred             EEEEEeccC
Confidence            999999983

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.12  E-value=9.9e-12  Score=104.73  Aligned_cols=82  Identities=28%  Similarity=0.485  Sum_probs=67.9

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe------CCee
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLE------TEVP  211 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~------~~~~  211 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.++. ......+.|.+|+.+|++++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            5688899999999999999985 4688999999865 344556789999999999999999999998754      5677


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus        94 ~LVmEy~~gg  103 (676)
T 3qa8_A           94 LLAMEYCEGG  103 (676)
T ss_dssp             CCEEECCSSC
T ss_pred             EEEEEeCCCC
Confidence            9999999875

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.12  E-value=8.4e-11  Score=90.85  Aligned_cols=86  Identities=19%  Similarity=0.364  Sum_probs=72.7

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCC--CCceeeeeeEEEeC
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKS--VHESNVEQFINEVVILSQIN--HRNVVKLLGCCLET  208 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~--h~niv~l~g~~~~~  208 (221)
                      ..+....++|.+.+.||+|+||.||++...++..||+|.+..  ........|.+|+.++.+++  ||||+++++++...
T Consensus        21 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~  100 (313)
T 3cek_A           21 QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD  100 (313)
T ss_dssp             CEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS
T ss_pred             eeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC
Confidence            344555677888999999999999999987899999998864  33445678999999999996  59999999999999


Q ss_pred             CeeEEEEEcc
Q 036177          209 EVPLLVYEFI  218 (221)
Q Consensus       209 ~~~~lv~e~~  218 (221)
                      +..+++||+.
T Consensus       101 ~~~~lv~e~~  110 (313)
T 3cek_A          101 QYIYMVMECG  110 (313)
T ss_dssp             SEEEEEECCC
T ss_pred             CEEEEEEecC
Confidence            9999999954

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.12  E-value=1.1e-10  Score=93.39  Aligned_cols=76  Identities=21%  Similarity=0.315  Sum_probs=60.9

Q ss_pred             Ccccc-ceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHc-CCCCceeeeeeEEEe----CCeeEE
Q 036177          141 NYKVS-RIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQ-INHRNVVKLLGCCLE----TEVPLL  213 (221)
Q Consensus       141 ~~~~~-~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~g~~~~----~~~~~l  213 (221)
                      +|... +.||+|+||.||++.. .++..||+|.++.     ...+.+|+.++.+ .+||||+++++++..    ....+|
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l  136 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI  136 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence            44444 6899999999999985 4688999999853     2457789888754 589999999998865    456899


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ||||+++|
T Consensus       137 v~E~~~gg  144 (400)
T 1nxk_A          137 VMECLDGG  144 (400)
T ss_dssp             EEECCCSE
T ss_pred             EEEeCCCC
Confidence            99999875

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.10  E-value=4e-10  Score=87.83  Aligned_cols=81  Identities=38%  Similarity=0.495  Sum_probs=62.9

Q ss_pred             hhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHH--cCCCCceeeeeeEEEe-----CC
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILS--QINHRNVVKLLGCCLE-----TE  209 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~--~l~h~niv~l~g~~~~-----~~  209 (221)
                      ...++|.+.+.||+|+||.||++.. ++..||+|.+...   ....+..|.+++.  .++||||+++++....     ..
T Consensus        10 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   85 (336)
T 3g2f_A           10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM   85 (336)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred             cChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence            4457788899999999999999987 7899999998642   3345666665544  5799999999986543     22


Q ss_pred             eeEEEEEcccCC
Q 036177          210 VPLLVYEFILNG  221 (221)
Q Consensus       210 ~~~lv~e~~~~G  221 (221)
                      ..++||||+++|
T Consensus        86 ~~~lv~e~~~~g   97 (336)
T 3g2f_A           86 EYLLVMEYYPNG   97 (336)
T ss_dssp             EEEEEECCCTTC
T ss_pred             eEEEEEecCCCC
Confidence            568999999876

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.09  E-value=2.2e-10  Score=88.25  Aligned_cols=82  Identities=30%  Similarity=0.464  Sum_probs=63.6

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCC-----CcccHHHHHHHHHHHHcC---CCCceeeeeeEEEeCC
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-----HESNVEQFINEVVILSQI---NHRNVVKLLGCCLETE  209 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-----~~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~~~~  209 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.++..     .......+.+|+.+++.+   +||||+++++++....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~   87 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR   87 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence            45788899999999999999994 56889999987531     112234677888887766   4999999999988754


Q ss_pred             -----eeEEEEEcccC
Q 036177          210 -----VPLLVYEFILN  220 (221)
Q Consensus       210 -----~~~lv~e~~~~  220 (221)
                           ..+++|||+.+
T Consensus        88 ~~~~~~~~lv~e~~~~  103 (308)
T 3g33_A           88 TDREIKVTLVFEHVDQ  103 (308)
T ss_dssp             SSSEEEEEEEEECCCC
T ss_pred             CCCceeEEEEehhhhc
Confidence                 47899999864

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.09  E-value=2.6e-10  Score=87.60  Aligned_cols=76  Identities=21%  Similarity=0.322  Sum_probs=62.2

Q ss_pred             Ccccc-ceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHH-HcCCCCceeeeeeEEEe----CCeeEE
Q 036177          141 NYKVS-RIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVIL-SQINHRNVVKLLGCCLE----TEVPLL  213 (221)
Q Consensus       141 ~~~~~-~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~g~~~~----~~~~~l  213 (221)
                      +|... +.||+|+||.||++.. .++..||+|.++.     ...+.+|+.++ +.++||||+++++++..    ....++
T Consensus        18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l   92 (299)
T 3m2w_A           18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI   92 (299)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence            34444 7899999999999985 5688999999853     24577899888 55699999999999876    567899


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ||||+++|
T Consensus        93 v~e~~~~~  100 (299)
T 3m2w_A           93 VMECLDGG  100 (299)
T ss_dssp             EECCCCSC
T ss_pred             EEeecCCC
Confidence            99999875

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.08  E-value=7.1e-11  Score=91.18  Aligned_cols=84  Identities=31%  Similarity=0.392  Sum_probs=60.5

Q ss_pred             hhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc------ccHHHHHHHHHHHHcC----CCCceeeeeeEE
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE------SNVEQFINEVVILSQI----NHRNVVKLLGCC  205 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~------~~~~~~~~e~~~l~~l----~h~niv~l~g~~  205 (221)
                      .-.++|.+.+.||+|+||.||++.. .++..||+|.++....      .....+.+|+.++.++    +||||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            3456788899999999999999984 5688999999865322      2234567899999988    899999999999


Q ss_pred             EeCCeeEEEEEc-ccC
Q 036177          206 LETEVPLLVYEF-ILN  220 (221)
Q Consensus       206 ~~~~~~~lv~e~-~~~  220 (221)
                      ...+..++++|| +++
T Consensus       108 ~~~~~~~~v~e~~~~~  123 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPA  123 (312)
T ss_dssp             -----CEEEEECCSSE
T ss_pred             ecCCeEEEEEEecCCC
Confidence            888889999998 543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.08  E-value=2e-10  Score=92.87  Aligned_cols=75  Identities=24%  Similarity=0.287  Sum_probs=62.9

Q ss_pred             ccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEccc
Q 036177          142 YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      +...+.||+|+||+||.....+|..||||.+..   ...+.+.+|+.+|.++ +||||+++++.....+..++||||+.
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~---~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~   92 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI---DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN   92 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEG---GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcH---HHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence            344678999999999766555799999998854   2245688999999986 89999999999998999999999985

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.07  E-value=4.4e-10  Score=86.02  Aligned_cols=78  Identities=23%  Similarity=0.317  Sum_probs=67.3

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.+....  ....+.+|+.++..+ +|+|+++++++.......+++||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            45688899999999999999994 578899999886432  234588999999999 89999999999999999999999


Q ss_pred             cc
Q 036177          217 FI  218 (221)
Q Consensus       217 ~~  218 (221)
                      |+
T Consensus        87 ~~   88 (298)
T 1csn_A           87 LL   88 (298)
T ss_dssp             CC
T ss_pred             ec
Confidence            98

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.07  E-value=4.1e-10  Score=90.88  Aligned_cols=81  Identities=25%  Similarity=0.317  Sum_probs=67.3

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC------CCCceeeeeeEEEeCCee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQI------NHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~g~~~~~~~~  211 (221)
                      ..+|.+.+.||+|+||.||++.. ..+..||+|.++.. ......+.+|+.++..+      +|+||+++++.+...+..
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            35688899999999999999985 45789999998752 23346678888888766      578999999999999999


Q ss_pred             EEEEEcccC
Q 036177          212 LLVYEFILN  220 (221)
Q Consensus       212 ~lv~e~~~~  220 (221)
                      +++|||+.+
T Consensus       175 ~lv~e~~~~  183 (429)
T 3kvw_A          175 CMTFELLSM  183 (429)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEeccCC
Confidence            999999864

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.06  E-value=1.6e-10  Score=91.94  Aligned_cols=81  Identities=27%  Similarity=0.343  Sum_probs=66.7

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC--------CCceeeeeeEEE---
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQIN--------HRNVVKLLGCCL---  206 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~g~~~---  206 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.++.. ....+.+.+|+.+|+.++        ||||+++++.+.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            36788899999999999999984 46889999998743 334567899999999885        888999999887   


Q ss_pred             -eCCeeEEEEEcccC
Q 036177          207 -ETEVPLLVYEFILN  220 (221)
Q Consensus       207 -~~~~~~lv~e~~~~  220 (221)
                       .....++||||+.+
T Consensus       115 ~~~~~~~lv~e~~~~  129 (397)
T 1wak_A          115 VNGTHICMVFEVLGH  129 (397)
T ss_dssp             TTEEEEEEEECCCCC
T ss_pred             CCCceEEEEEeccCc
Confidence             34578999999854

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.06  E-value=1.6e-10  Score=90.58  Aligned_cols=80  Identities=18%  Similarity=0.267  Sum_probs=59.2

Q ss_pred             ccCccccceecccCceEEEEEEeC----CCcEEEEEeccCCCcc-----------cHHHHHHHHHHHHcCCCCceeeeee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT----DGRIVAVKKSKSVHES-----------NVEQFINEVVILSQINHRNVVKLLG  203 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~----~~~~vavk~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~g  203 (221)
                      .++|.+.+.||+|+||.||++...    .+..+|+|........           ....+.+|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            356888999999999999999964    4678999987653221           1234778889999999999999999


Q ss_pred             EEEe----CCeeEEEEEcc
Q 036177          204 CCLE----TEVPLLVYEFI  218 (221)
Q Consensus       204 ~~~~----~~~~~lv~e~~  218 (221)
                      ++..    ....++||||+
T Consensus       116 ~~~~~~~~~~~~~lv~e~~  134 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL  134 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE
T ss_pred             ccccccCCCcEEEEEEecc
Confidence            9887    67889999998

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.05  E-value=1.4e-10  Score=91.09  Aligned_cols=75  Identities=15%  Similarity=0.229  Sum_probs=61.9

Q ss_pred             ccCccccceecccCceEEEEEEeCC---------CcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceee---------
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTD---------GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVK---------  200 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~---------~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~---------  200 (221)
                      .++|.+.+.||+|+||.||++....         +..||+|.+...     ..+.+|+.++.+++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            3678889999999999999998643         778999988643     45889999999999999988         


Q ss_pred             ------eeeEEEe-CCeeEEEEEcc
Q 036177          201 ------LLGCCLE-TEVPLLVYEFI  218 (221)
Q Consensus       201 ------l~g~~~~-~~~~~lv~e~~  218 (221)
                            ++++... .+..++||||+
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~  140 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL  140 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC
T ss_pred             ccCccchhhccccCCcEEEEEecCC
Confidence                  6677766 67889999998

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.04  E-value=2.7e-10  Score=89.97  Aligned_cols=81  Identities=21%  Similarity=0.268  Sum_probs=60.9

Q ss_pred             hccCccccceecccCceEEEEEEeCC------CcEEEEEeccCCCccc-----------HHHHHHHHHHHHcCCCCceee
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLTD------GRIVAVKKSKSVHESN-----------VEQFINEVVILSQINHRNVVK  200 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~~------~~~vavk~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~  200 (221)
                      ..++|.+.+.||+|+||.||++....      +..||+|.+.......           ...+..|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            44678889999999999999998644      4679999876533211           123455666777889999999


Q ss_pred             eeeEEEeC----CeeEEEEEcc
Q 036177          201 LLGCCLET----EVPLLVYEFI  218 (221)
Q Consensus       201 l~g~~~~~----~~~~lv~e~~  218 (221)
                      +++++...    ...+|||||+
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~  134 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF  134 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE
T ss_pred             EEeeeeeccCCcceEEEEEeCC
Confidence            99998764    4579999998

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.01  E-value=1.9e-10  Score=89.22  Aligned_cols=88  Identities=27%  Similarity=0.417  Sum_probs=69.4

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc------ccHHHHHHHHHHHHcCC--CCceeeeee
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE------SNVEQFINEVVILSQIN--HRNVVKLLG  203 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~------~~~~~~~~e~~~l~~l~--h~niv~l~g  203 (221)
                      .+.....++|.+.+.||+|+||.||++.. .++..||+|.++....      .....+.+|+.++++++  ||||+++++
T Consensus        36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~  115 (320)
T 3a99_A           36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD  115 (320)
T ss_dssp             ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred             cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence            33444567789999999999999999984 5688999998864221      12345788999999995  599999999


Q ss_pred             EEEeCCeeEEEEEcccC
Q 036177          204 CCLETEVPLLVYEFILN  220 (221)
Q Consensus       204 ~~~~~~~~~lv~e~~~~  220 (221)
                      ++...+..++++||+..
T Consensus       116 ~~~~~~~~~lv~e~~~~  132 (320)
T 3a99_A          116 WFERPDSFVLILERPEP  132 (320)
T ss_dssp             EEECSSEEEEEEECCSS
T ss_pred             EEecCCcEEEEEEcCCC
Confidence            99999999999999864

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.98  E-value=1.1e-09  Score=85.24  Aligned_cols=80  Identities=26%  Similarity=0.415  Sum_probs=66.8

Q ss_pred             ccCccccceecccCceEEEEEEe--CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCc------eeeeeeEEEeCCe
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML--TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN------VVKLLGCCLETEV  210 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~--~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~g~~~~~~~  210 (221)
                      .++|.+.+.||+|+||.||++..  .++..||+|.++.. ....+.+.+|+.++..++|+|      ++++++.+...+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            35688899999999999999985  35789999998653 234567889999998886654      9999999999999


Q ss_pred             eEEEEEccc
Q 036177          211 PLLVYEFIL  219 (221)
Q Consensus       211 ~~lv~e~~~  219 (221)
                      .++||||+.
T Consensus        92 ~~lv~e~~~  100 (339)
T 1z57_A           92 ICIVFELLG  100 (339)
T ss_dssp             EEEEEECCC
T ss_pred             EEEEEcCCC
Confidence            999999993

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.97  E-value=1e-09  Score=91.06  Aligned_cols=76  Identities=11%  Similarity=0.100  Sum_probs=54.8

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEeccCCCc--c------cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHE--S------NVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~--~------~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      .+.||+|+||.||++.+ .+..+++|.......  .      ..+.|.+|+.+|++++||||+++..+....+..+||||
T Consensus       341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            56899999999999965 677888887543111  1      13458999999999999999977777777888899999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus       420 ~~~gg  424 (540)
T 3en9_A          420 YINGK  424 (540)
T ss_dssp             CCCSE
T ss_pred             CCCCC
Confidence            99865

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.97  E-value=1.5e-09  Score=85.95  Aligned_cols=83  Identities=13%  Similarity=0.015  Sum_probs=53.5

Q ss_pred             hhhccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCC---cccHHHHHHHHH---HHHcCCCCceeeee------
Q 036177          136 EKATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH---ESNVEQFINEVV---ILSQINHRNVVKLL------  202 (221)
Q Consensus       136 ~~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~---~~~~~~~~~e~~---~l~~l~h~niv~l~------  202 (221)
                      .....+|...+.||+|+||.||++.. .++..||+|.++...   ....+.+.+|+.   .|+. +||||++++      
T Consensus        58 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p  136 (371)
T 3q60_A           58 SQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLP  136 (371)
T ss_dssp             TCCEEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCC
T ss_pred             CCCceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEee
Confidence            34455688899999999999999995 468899999987633   233556778854   5555 799977744      


Q ss_pred             -eEEEeC-----------------CeeEEEEEccc
Q 036177          203 -GCCLET-----------------EVPLLVYEFIL  219 (221)
Q Consensus       203 -g~~~~~-----------------~~~~lv~e~~~  219 (221)
                       ++....                 ...+|||||++
T Consensus       137 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  171 (371)
T 3q60_A          137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS  171 (371)
T ss_dssp             CEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS
T ss_pred             ehheecCCCCCeeeccCCcccceeeeEEEEecCCC
Confidence             444332                 23799999987

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.95  E-value=2.3e-09  Score=83.70  Aligned_cols=77  Identities=22%  Similarity=0.329  Sum_probs=57.9

Q ss_pred             cCcccc-ceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHH-HHHHcCCCCceeeeeeEEEe----CCeeE
Q 036177          140 DNYKVS-RIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEV-VILSQINHRNVVKLLGCCLE----TEVPL  212 (221)
Q Consensus       140 ~~~~~~-~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~l~g~~~~----~~~~~  212 (221)
                      ++|.+. +.||+|+||.||++... ++..||+|.+....     ...+|+ ..+..+.||||+++++++..    ....+
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  102 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL  102 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence            456664 46999999999999964 68999999986421     222333 33566799999999999876    34578


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus       103 lv~e~~~gg  111 (336)
T 3fhr_A          103 IIMECMEGG  111 (336)
T ss_dssp             EEEECCTTE
T ss_pred             EEEeccCCC
Confidence            999999875

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.94  E-value=2.6e-09  Score=81.59  Aligned_cols=78  Identities=23%  Similarity=0.365  Sum_probs=63.8

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEE-EeCCeeEEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC-LETEVPLLVYE  216 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~-~~~~~~~lv~e  216 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.+.....  ...+.+|+.++..++|++++..+..+ ...+..+++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            35688899999999999999994 5788999998765332  24689999999999988877766655 55678899999


Q ss_pred             cc
Q 036177          217 FI  218 (221)
Q Consensus       217 ~~  218 (221)
                      |+
T Consensus        86 ~~   87 (296)
T 3uzp_A           86 LL   87 (296)
T ss_dssp             CC
T ss_pred             ec
Confidence            98

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.94  E-value=2.2e-09  Score=81.79  Aligned_cols=78  Identities=18%  Similarity=0.176  Sum_probs=59.2

Q ss_pred             cCccccceecccCceEEEEEEeCCCcEEEEEeccCCCc------------------ccHHHHHHHHHHHHcCCCCceeee
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHE------------------SNVEQFINEVVILSQINHRNVVKL  201 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~------------------~~~~~~~~e~~~l~~l~h~niv~l  201 (221)
                      ..+.+.+.||+|+||.||++...++..||+|.++....                  .....+.+|+.+|++++  | +++
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v  166 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV  166 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred             eEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence            34456789999999999999987789999999864221                  13456999999999998  4 555


Q ss_pred             eeEEEeCCeeEEEEEcccCC
Q 036177          202 LGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       202 ~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .+... .+..++||||+++|
T Consensus       167 ~~~~~-~~~~~lvmE~~~g~  185 (282)
T 1zar_A          167 PKVYA-WEGNAVLMELIDAK  185 (282)
T ss_dssp             CCEEE-EETTEEEEECCCCE
T ss_pred             CeEEe-ccceEEEEEecCCC
Confidence            55443 35569999999875

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.90  E-value=3e-09  Score=84.51  Aligned_cols=82  Identities=28%  Similarity=0.360  Sum_probs=67.2

Q ss_pred             hccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-CC-----ceeeeeeEEEeCCe
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-HR-----NVVKLLGCCLETEV  210 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~g~~~~~~~  210 (221)
                      ..++|.+.+.||+|+||.||++.. .++..||+|.++.. ......+.+|+.++..++ |+     +|+++.+.+...+.
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            346788899999999999999985 45788999998742 233567888998888774 55     49999999999999


Q ss_pred             eEEEEEcccC
Q 036177          211 PLLVYEFILN  220 (221)
Q Consensus       211 ~~lv~e~~~~  220 (221)
                      .++||||+++
T Consensus       131 ~~lv~e~~~~  140 (382)
T 2vx3_A          131 LCLVFEMLSY  140 (382)
T ss_dssp             EEEEEECCCC
T ss_pred             eEEEEecCCC
Confidence            9999999864

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.89  E-value=1.5e-09  Score=85.74  Aligned_cols=79  Identities=23%  Similarity=0.337  Sum_probs=65.3

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-----------CCceeeeeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-----------HRNVVKLLGCCL  206 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~g~~~  206 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.++. .......+.+|+.++.+++           ||||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS-CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC-CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            35688899999999999999984 5688999999864 2234567889999999876           899999999987


Q ss_pred             eCC----eeEEEEEcc
Q 036177          207 ETE----VPLLVYEFI  218 (221)
Q Consensus       207 ~~~----~~~lv~e~~  218 (221)
                      ..+    ..+++|||+
T Consensus        97 ~~~~~~~~~~lv~e~~  112 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL  112 (373)
T ss_dssp             EEETTEEEEEEEECCC
T ss_pred             ccCCCCceEEEEEecC
Confidence            643    678999998

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.89  E-value=2.8e-09  Score=83.43  Aligned_cols=81  Identities=20%  Similarity=0.267  Sum_probs=66.9

Q ss_pred             ccCccccceecccCceEEEEEEeC-CC-cEEEEEeccCCCcccHHHHHHHHHHHHcCCCCc------eeeeeeEEEeCCe
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DG-RIVAVKKSKSVHESNVEQFINEVVILSQINHRN------VVKLLGCCLETEV  210 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~-~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~g~~~~~~~  210 (221)
                      .++|.+.+.||+|+||.||++... .+ ..||+|.++.. ....+.+.+|+.+++.++|++      ++.+.+.+...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            357888999999999999999853 34 68999998653 234567889999999887666      8999999999999


Q ss_pred             eEEEEEcccC
Q 036177          211 PLLVYEFILN  220 (221)
Q Consensus       211 ~~lv~e~~~~  220 (221)
                      .+++|||+.+
T Consensus        97 ~~lv~e~~~~  106 (355)
T 2eu9_A           97 MCIAFELLGK  106 (355)
T ss_dssp             EEEEEECCCC
T ss_pred             EEEEEeccCC
Confidence            9999999954

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.89  E-value=3.2e-09  Score=81.03  Aligned_cols=78  Identities=23%  Similarity=0.365  Sum_probs=60.7

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEE-EeCCeeEEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC-LETEVPLLVYE  216 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~-~~~~~~~lv~e  216 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.+.....  ...+.+|+.++..++|++++..++.+ ...+..+++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            35688899999999999999984 5788999998654222  23588999999999988887777665 55678899999


Q ss_pred             cc
Q 036177          217 FI  218 (221)
Q Consensus       217 ~~  218 (221)
                      |+
T Consensus        86 ~~   87 (296)
T 4hgt_A           86 LL   87 (296)
T ss_dssp             CC
T ss_pred             cc
Confidence            98

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.83  E-value=9.8e-09  Score=83.99  Aligned_cols=78  Identities=19%  Similarity=0.333  Sum_probs=62.5

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCC-CceeeeeeEEEeCCeeEEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINH-RNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~g~~~~~~~~~lv~e  216 (221)
                      .++|.+.+.||+|+||.||++.. .++..||||.+.....  ...+.+|+.++..++| +++..+..+....+..+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            35688899999999999999995 5689999998764322  2358899999999976 555566666677888899999


Q ss_pred             cc
Q 036177          217 FI  218 (221)
Q Consensus       217 ~~  218 (221)
                      |+
T Consensus        84 ~~   85 (483)
T 3sv0_A           84 LL   85 (483)
T ss_dssp             CC
T ss_pred             CC
Confidence            98

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.54  E-value=5.9e-08  Score=59.53  Aligned_cols=50  Identities=32%  Similarity=0.753  Sum_probs=42.0

Q ss_pred             cCCcccccCCCCCcccccccCCCCCCC-CCceeecCCceeeeCCCCccCCCcc
Q 036177            6 QCSLIFLLKKLRATDIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus         6 ~c~~~~~~~~~~c~~~~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      +|++||.++...|.|+++|....  .| ++.|.+..++|.|.|+.||.+++..
T Consensus        29 ~C~~Gy~~~g~~C~dideC~~~~--~C~~~~C~n~~g~y~C~C~~G~~g~~~~   79 (82)
T 1emn_A           29 ECPFGYILAGNECVDTDECSVGN--PCGNGTCKNVIGGFECTCEEGFEPGPMM   79 (82)
T ss_dssp             ECCTTEEEETTEEEECCGGGTCC--TTSSSCEEECSSSEEECCSSSSCCCSSS
T ss_pred             ECCCCeECCCCccCCcccccCCC--CCCCCEeECCCCCEEeECCCCeEeCCCC
Confidence            57899987788899999997433  56 5899999999999999999988753

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.54  E-value=5.6e-08  Score=81.09  Aligned_cols=75  Identities=16%  Similarity=-0.016  Sum_probs=52.0

Q ss_pred             eecccCceEEEEEE-eCCCcEEEEEeccCC----------CcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEE
Q 036177          147 IIGQGGQGTVFKGM-LTDGRIVAVKKSKSV----------HESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       147 ~lg~G~fg~v~~~~-~~~~~~vavk~~~~~----------~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv  214 (221)
                      ..+.|.+|...... +-.|..+++|.+...          .....++|.+|+++|+++ .|+||++++++..+.+..|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            34555555544433 224777999987431          122356799999999999 799999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus       321 MEyv~G~  327 (569)
T 4azs_A          321 MEKLPGR  327 (569)
T ss_dssp             EECCCSE
T ss_pred             EecCCCC
Confidence            9999875

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.51  E-value=1.2e-07  Score=71.16  Aligned_cols=74  Identities=22%  Similarity=0.165  Sum_probs=53.8

Q ss_pred             ccccceecccCceEEEEEEe-CCCcE--EEEEeccCCCcc------------------------cHHHHHHHHHHHHcCC
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRI--VAVKKSKSVHES------------------------NVEQFINEVVILSQIN  194 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~--vavk~~~~~~~~------------------------~~~~~~~e~~~l~~l~  194 (221)
                      +.+...||+|+||.||++.. .+|..  ||+|..+.....                        ....+.+|+..|..++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            45678999999999999996 67888  999986542111                        0135889999999998


Q ss_pred             CCce--eeeeeEEEeCCeeEEEEEccc
Q 036177          195 HRNV--VKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       195 h~ni--v~l~g~~~~~~~~~lv~e~~~  219 (221)
                      |+++  ..++..    ...+|||||+.
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g  151 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIG  151 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCE
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecC
Confidence            8764  333332    35689999994

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.47  E-value=1e-07  Score=59.09  Aligned_cols=51  Identities=35%  Similarity=0.712  Sum_probs=41.3

Q ss_pred             cCCccccc---CCCCCcccccccCCCCCCC-CCceeecCCceeeeCCCCccCCCcc
Q 036177            6 QCSLIFLL---KKLRATDIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus         6 ~c~~~~~~---~~~~c~~~~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      +|+.||..   +...|.|+++|.. .+..| .+.|.++.|+|.|.|+.||.++...
T Consensus        28 ~C~~Gy~~~~~~g~~C~dideC~~-~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~   82 (86)
T 1lmj_A           28 KCDEGYESGFMMMKNCMDIDECQR-DPLLCRGGVCHNTEGSYRCECPPGHQLSPNI   82 (86)
T ss_dssp             CCCSSEEECTTTSSSEEECCHHHH-CSSTTTTSEEEEETTEEEEESCTTSCCCSSS
T ss_pred             eCCCCcCccCCCCCccCCcccccC-CCCcCCCCEeEcCCCCEEEECcCCcccCCCC
Confidence            47889975   3678999999975 23346 5899999999999999999987754

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.35  E-value=1.4e-07  Score=74.54  Aligned_cols=33  Identities=21%  Similarity=0.304  Sum_probs=29.6

Q ss_pred             ccccceecccCceEEEEEEeCCCcEEEEEeccC
Q 036177          142 YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKS  174 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~  174 (221)
                      +.+...||+|+||.||++...+|+.||+|.++.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~  129 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRL  129 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEEEEEEEec
Confidence            678899999999999999988899999998653

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.33  E-value=7e-08  Score=62.30  Aligned_cols=50  Identities=38%  Similarity=0.685  Sum_probs=11.8

Q ss_pred             cCCccccc-CCCCCcccccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc
Q 036177            6 QCSLIFLL-KKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus         6 ~c~~~~~~-~~~~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      +|++||.. +...|+|+++|..+  ..|.+.|.|..++|.|.|+.||.++.+.
T Consensus        53 ~C~~Gy~g~~g~~C~dideC~~~--~~C~~~C~n~~gsy~C~C~~Gy~~~~d~  103 (107)
T 2w2n_E           53 LCPDGFQLVAQRRCEDIDECQDP--DTCSQLCVNLEGGYKCQCEEGFQLDPHT  103 (107)
T ss_dssp             ECCTTCEEETTTEEEC-------------------------------------
T ss_pred             ECCCCccccCCCccccccccCCC--CCcCCeeecCCCCEEEECCCCceECCCC
Confidence            47889866 56789999999743  3677899999999999999999887654

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=98.18  E-value=1.5e-06  Score=48.40  Aligned_cols=42  Identities=31%  Similarity=0.792  Sum_probs=32.5

Q ss_pred             cccccccCCC-------CCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           19 TDIDECLDKE-------KYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        19 ~~~~~C~~~~-------~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      .|+++|....       ...|...|.|+.|+|.|.|+.||.++... .|.
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~   51 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccC
Confidence            5788897531       24687899999999999999999876654 453

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.18  E-value=2.4e-06  Score=68.53  Aligned_cols=62  Identities=15%  Similarity=0.190  Sum_probs=48.1

Q ss_pred             hhhhhccCccccceecccCceEEEEEE-eCCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCC
Q 036177          134 DLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSV---HESNVEQFINEVVILSQINH  195 (221)
Q Consensus       134 ~~~~~~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h  195 (221)
                      ++.....++...+.||+|+||.||++. ..++..||||.++..   .....+.|.+|+.++..++|
T Consensus        72 ~~~~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           72 ELGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             SSSSCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             cCCCCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            344455668888999999999999999 456899999988742   22335779999999999977

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.12  E-value=1.1e-06  Score=60.17  Aligned_cols=51  Identities=39%  Similarity=0.655  Sum_probs=42.0

Q ss_pred             cCCccccc-CCCCCcccccccCCCCCCC-CCceeecCCceeeeCCCCccCCCcc
Q 036177            6 QCSLIFLL-KKLRATDIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus         6 ~c~~~~~~-~~~~c~~~~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      +|+.||.. +...|.|+++|.. .+..| ++.|.++.++|+|.|+.||.++...
T Consensus        91 ~C~~Gy~~~~g~~C~dideC~~-~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~  143 (147)
T 2w86_A           91 ICGKGYSRIKGTQCEDIDECEV-FPGVCKNGLCVNTRGSFKCQCPSGMTLDATG  143 (147)
T ss_dssp             TTCTTEEEEETTEEEECCHHHH-STTCSSSSEEEEETTEEEEECCTTCCBCTTS
T ss_pred             cCCCccccCCCCccCccccccC-CCCCCCCCEEECCCCCEEeeCCCCCccCCCC
Confidence            68899965 5788999999974 22356 5799999999999999999988754

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.10  E-value=1.4e-06  Score=69.66  Aligned_cols=53  Identities=38%  Similarity=0.738  Sum_probs=44.1

Q ss_pred             cCCccccc-CCCCCcccccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177            6 QCSLIFLL-KKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus         6 ~c~~~~~~-~~~~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      +|++||.+ +...|+|+++|..+  ..|...|.|..|+|.|.|+.||.++... .|.
T Consensus        24 ~C~~G~~~~~~~~C~dideC~~~--~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~   78 (400)
T 3p5b_L           24 LCPDGFQLVAQRRCEDIDECQDP--DTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK   78 (400)
T ss_dssp             ECCTTEEECSSSCEEECCCCSTT--SSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCC
T ss_pred             ECCCCCCcCCCCcccCchhhhcc--CCCCCccCCCccceeeecccccccccccccee
Confidence            47899965 67889999999853  3787799999999999999999987765 554

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=97.97  E-value=1.5e-06  Score=57.13  Aligned_cols=49  Identities=33%  Similarity=0.677  Sum_probs=41.2

Q ss_pred             cCCcccccC-CCCCcccccccCCCCCCCCCceeecCCceeeeCCCCccCCCc
Q 036177            6 QCSLIFLLK-KLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus         6 ~c~~~~~~~-~~~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      +|+.||.++ ...|.|+++|...  ..|.+.|.+..++|.|.|+.||.+++.
T Consensus        64 ~C~~Gy~~~~g~~C~dideC~~~--~~C~~~C~n~~g~y~C~C~~G~~g~~~  113 (118)
T 1dx5_I           64 ECPEGYILDDGFICTDIDECENG--GFCSGVCHNLPGTFECICGPDSALAGQ  113 (118)
T ss_dssp             ECCTTEEEETTTEEEECCHHHHC--SSCSSEEEECSSSEEEEECSSSSCEEE
T ss_pred             ECCCCccCCCCCccccccccCCC--CCCcCeEEeCCCCEEEECCCCCccCCC
Confidence            578899765 6789999999863  367899999999999999999987664

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=97.87  E-value=7.8e-06  Score=55.58  Aligned_cols=54  Identities=30%  Similarity=0.581  Sum_probs=42.3

Q ss_pred             cCCcccccC----------CCCCcccccccCCCCCCC--CCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177            6 QCSLIFLLK----------KLRATDIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus         6 ~c~~~~~~~----------~~~c~~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      +|++||..+          ...|+|+++|.. ....|  .+.|.+..++|.|.|+.||.++... .|.
T Consensus        71 ~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~-~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~  137 (143)
T 2bou_A           71 VCSPGYEPVSGAKTFKNESENTCQDVDECSS-GQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQ  137 (143)
T ss_dssp             EECTTEEETTCCSCBSSGGGCCEEECCHHHH-TCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSB
T ss_pred             ECCCCcccCcCccccccCCCCCcCCccCccC-cCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCc
Confidence            468888664          348999999985 22356  5899999999999999999998765 554

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.78  E-value=8.9e-05  Score=55.37  Aligned_cols=80  Identities=13%  Similarity=0.038  Sum_probs=62.1

Q ss_pred             cCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      ..+.....++.|+.+.||+... .+..+++|............+.+|+.+|+.+ .|.++.++++.....+..++||||+
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i   92 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA   92 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred             ccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEec
Confidence            3455666778888899999875 4678999987652222334688999999988 4677888998888888899999999


Q ss_pred             cC
Q 036177          219 LN  220 (221)
Q Consensus       219 ~~  220 (221)
                      ++
T Consensus        93 ~G   94 (263)
T 3tm0_A           93 DG   94 (263)
T ss_dssp             SS
T ss_pred             CC
Confidence            76

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.78  E-value=5.9e-06  Score=65.65  Aligned_cols=53  Identities=25%  Similarity=0.599  Sum_probs=19.7

Q ss_pred             cCCccccc--CCCCCcccccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177            6 QCSLIFLL--KKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus         6 ~c~~~~~~--~~~~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      +|++||.+  |...|.|+++|..  ...|...|.|+.|+|.|.|+.||...++. .|.
T Consensus        27 ~C~~G~~l~~~~~~C~d~~eC~~--~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~   82 (386)
T 3v65_B           27 TCHTGYRLTEDGRTCQDVNECAE--EGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCK   82 (386)
T ss_dssp             ---------------------------CCTTEEC-----CCEECCTTEEECTTSSCEE
T ss_pred             ECCCCceECCCCCccCccceeCC--cCcccCcCCCCCCCCeEEECCCceEcCCCCeEC
Confidence            57899975  5788999999973  33787779999999999999999865544 454

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=97.74  E-value=1.3e-05  Score=55.62  Aligned_cols=47  Identities=40%  Similarity=0.779  Sum_probs=37.1

Q ss_pred             ccccC--CCCCcccccccCCCCCCC-CCceeecCCceeeeCCCCccCCCcc
Q 036177           10 IFLLK--KLRATDIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus        10 ~~~~~--~~~c~~~~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      ||..+  ...|.|+++|.. .+..| ++.|.++.++|+|.|+.||.++.+.
T Consensus       109 G~~~~~~~~~c~dideC~~-~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~  158 (162)
T 1uzk_A          109 GFRPNPITVILEDIDECQE-LPGLCQGGKCINTFGSFQCRCPTGYYLNEDT  158 (162)
T ss_dssp             TEEECTTTCCEEECCHHHH-CGGGGBTSEEEECSSCEEEECCTTCCBCTTT
T ss_pred             CcccCCCCCccCccccccC-CCCCcCCCEeEcCCCCEEeeCCCCccCCCCC
Confidence            77654  456899999974 22256 5799999999999999999998754

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=97.72  E-value=1.4e-05  Score=49.33  Aligned_cols=52  Identities=31%  Similarity=0.646  Sum_probs=38.6

Q ss_pred             cCCcccccC--CCCCcccccccCCCCCCCCCceeecCCceeeeCC--CCccCCCcc-ccc
Q 036177            6 QCSLIFLLK--KLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCP--IGMYGDGKV-GCR   60 (221)
Q Consensus         6 ~c~~~~~~~--~~~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~--~g~~~~~~~-~c~   60 (221)
                      +|++||.++  ...|+|+++|.. .  .|.+.|.+..++|.|.|+  .||...... .|.
T Consensus        28 ~C~~G~~~~~~g~~C~dideC~~-~--~C~~~C~n~~g~y~C~C~g~~G~~~~~~~~~C~   84 (87)
T 1z6c_A           28 ECPEGYRYNLKSKSCEDIDECSE-N--MCAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCE   84 (87)
T ss_dssp             SSSTTCEEETTTTEEECCCHHHH-S--CCSSEECCCSSSCCEECCSSSCCBCCTTSSSCB
T ss_pred             ECCCCceECCCCCcCCCcCeeCC-C--CCCCEEEccCCCEEEECCCCcCCcccCCCCcce
Confidence            468898764  677999999964 3  577899999999999996  555544433 443

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=97.64  E-value=2e-05  Score=53.71  Aligned_cols=52  Identities=17%  Similarity=0.343  Sum_probs=36.1

Q ss_pred             cCCcccccCCCCCcccccccCCCCCCCCCce-eecCCceeeeCCCCccCCCcc-ccc
Q 036177            6 QCSLIFLLKKLRATDIDECLDKEKYHCEGKC-KNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus         6 ~c~~~~~~~~~~c~~~~~C~~~~~~~c~~~C-~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      +|++||.  ...|.++++|.. .+..|...| .+..++|.|.|+.||.+.++. .|.
T Consensus        72 ~C~~G~~--G~~C~~~deC~~-~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~  125 (146)
T 1x7a_L           72 WCQVGFE--GKNCELDATCNI-KNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCK  125 (146)
T ss_dssp             ECCSSEE--STTTCEECCTTS-GGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEE
T ss_pred             ecCCCCc--CCcCCCCccccC-CCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCC
Confidence            4566765  467888888864 233665688 888888889999988855443 443

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=97.58  E-value=6.4e-05  Score=58.01  Aligned_cols=50  Identities=24%  Similarity=0.415  Sum_probs=38.8

Q ss_pred             cCCcccccCCCCCc-ccccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc
Q 036177            6 QCSLIFLLKKLRAT-DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus         6 ~c~~~~~~~~~~c~-~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      .|++||.  ...|+ |+++|....+..|...|.+..++|.|.|+.||.+..+.
T Consensus        29 ~C~~g~~--g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~   79 (317)
T 3h5c_B           29 TCSPGYE--GSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDH   79 (317)
T ss_dssp             CCSSSCC--SSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTS
T ss_pred             ECCCCCc--CCccccCcccCCCCCCCCCcCccccCCCeeEEeccccccccccc
Confidence            4566765  56788 99999753235786699999999999999999886543

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=97.58  E-value=3.3e-05  Score=52.43  Aligned_cols=51  Identities=33%  Similarity=0.528  Sum_probs=38.9

Q ss_pred             cCCcccccC-------CCCCcccccccCCCCCCC--CCceeecCCceeeeCCCCccCCCc
Q 036177            6 QCSLIFLLK-------KLRATDIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus         6 ~c~~~~~~~-------~~~c~~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      +|.+||..+       ...|+|+++|.......|  .+.|.+..++|.|.|+.||.+...
T Consensus        22 ~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~   81 (143)
T 2bou_A           22 RCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSG   81 (143)
T ss_dssp             EECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTC
T ss_pred             eCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcC
Confidence            468888653       478999999986432346  589999999999999999988753

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=97.57  E-value=2.8e-05  Score=43.48  Aligned_cols=38  Identities=21%  Similarity=0.473  Sum_probs=28.5

Q ss_pred             ccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           22 DECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        22 ~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      ++|.. .+..|...|.|+.|+|.|.|+.||....+. .|.
T Consensus         2 dEC~~-~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~   40 (55)
T 2jkh_L            2 KLCSL-DNGDCDQFCHEEQNSVVCSCARGYTLADNGKACI   40 (55)
T ss_dssp             CCTTT-GGGGCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             ccccC-CCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeec
Confidence            56753 234677799999999999999999865544 453

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=97.56  E-value=3.2e-05  Score=45.31  Aligned_cols=42  Identities=26%  Similarity=0.524  Sum_probs=32.9

Q ss_pred             CcccccccCCCCCCCCCceeecCC-ceeeeCCCCccCCCcc-ccc
Q 036177           18 ATDIDECLDKEKYHCEGKCKNTIG-SYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        18 c~~~~~C~~~~~~~c~~~C~~~~~-~~~C~C~~g~~~~~~~-~c~   60 (221)
                      ..|+++|.. .+..|...|.++.| +|.|.|+.||...++. .|.
T Consensus         2 ~~d~~eC~~-~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~   45 (69)
T 1kli_L            2 KDDQLICVN-ENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT   45 (69)
T ss_dssp             CSCCCCTTS-GGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEE
T ss_pred             CcccccccC-CCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCccc
Confidence            357888964 34478889999998 8999999999876655 554

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=97.52  E-value=9.4e-05  Score=50.10  Aligned_cols=49  Identities=27%  Similarity=0.642  Sum_probs=38.4

Q ss_pred             cCCcccccCCCCCc-ccccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc
Q 036177            6 QCSLIFLLKKLRAT-DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus         6 ~c~~~~~~~~~~c~-~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      +|++||.  ...|+ ++++|.. .++...+.|.+..++|+|.|+.||.|+...
T Consensus        83 ~C~~G~~--G~~C~~~i~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  132 (143)
T 4d90_A           83 KCPRGFN--GIHCQHNINECEV-EPCKNGGICTDLVANYSCECPGEFMGRNCQ  132 (143)
T ss_dssp             ECCTTEE--STTSCEECCTTTT-CCSCTTCEEEEETTEEEEECCTTCBSTTSC
T ss_pred             ECcCCCc--CCCcccCCCcCCC-CCCCCCCEeECCCCCeEeECCCCCccCCce
Confidence            4677763  56787 9999974 333447899999999999999999998743

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.51  E-value=0.00013  Score=37.50  Aligned_cols=33  Identities=45%  Similarity=1.046  Sum_probs=26.9

Q ss_pred             ccccccCCCCCCC--CCceeecCCceeeeCCCCccCCC
Q 036177           20 DIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        20 ~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      |+++|.. .  +|  .+.|.+..++|.|.|+.||.|..
T Consensus         2 d~d~C~~-~--pC~ngg~C~~~~~~~~C~C~~G~~G~~   36 (39)
T 1edm_B            2 DGDQCES-N--PCLNGGSCKDDINSYECWCPFGFEGKN   36 (39)
T ss_dssp             CCCTTTT-C--CCCTTCEEEEETTEEEEECCTTCCSTT
T ss_pred             ccccCCC-C--CCCCCCEeEcCCCceEeECCCCCcCCc
Confidence            5778863 3  55  58999999999999999998764

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.49  E-value=6.4e-05  Score=64.27  Aligned_cols=53  Identities=38%  Similarity=0.773  Sum_probs=43.6

Q ss_pred             cCCccccc-CCCCCcccccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177            6 QCSLIFLL-KKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus         6 ~c~~~~~~-~~~~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      +|++||.+ +...|.|+++|..+.  .|+..|.|+.|+|.|.|+.||.++... .|.
T Consensus       318 ~C~~G~~~~~~~~C~dideC~~~~--~C~~~C~n~~g~y~C~C~~G~~~~~~~~~C~  372 (699)
T 1n7d_A          318 LCPDGFQLVAQRRCEDIDECQDPD--TCSQLCVNLEGGYKCQCEEGFQLDPHTKACK  372 (699)
T ss_dssp             CCCSSSCCCSSSCCCCCCCCSSSS--SCTTTCCBCSSCBCCCCCSSCBCCSSCCCCB
T ss_pred             eCCCCeEcCCCCcccCccccCCCC--ccccccccCCCCeeeeeecccccCCCCCccc
Confidence            57889865 678899999997533  788899999999999999999987654 554

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.47  E-value=4e-05  Score=66.25  Aligned_cols=53  Identities=38%  Similarity=0.738  Sum_probs=43.7

Q ss_pred             cCCccccc-CCCCCcccccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177            6 QCSLIFLL-KKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus         6 ~c~~~~~~-~~~~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      +|++||.+ +...|.|+++|..+  ..|+..|.|..|+|.|.|+.||..++.. .|.
T Consensus       336 ~C~~Gy~l~~g~~C~dideC~~~--~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~  390 (791)
T 3m0c_C          336 LCPDGFQLVAQRRCEDIDECQDP--DTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK  390 (791)
T ss_dssp             ECCTTCEEETTTEEECCCCCSSS--SSCTTTCCBCSSCBCCCCCSSEECCSSCCCCE
T ss_pred             CCCCCCccCCCCccccCcccCCC--CCCCCeeecCCCCceeecCCCCEeCCCCceee
Confidence            57889865 67889999999843  4788899999999999999999886654 453

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.43  E-value=0.00036  Score=51.72  Aligned_cols=76  Identities=16%  Similarity=0.142  Sum_probs=55.0

Q ss_pred             ccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCc--eeeeeeEEEeCCeeEEEEEccc
Q 036177          142 YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN--VVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      +......+.|..+.||+....+|..+++|.....   ....+.+|+.+|+.+.+.+  +.++++.....+..++||||++
T Consensus        22 ~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~   98 (264)
T 1nd4_A           22 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP   98 (264)
T ss_dssp             CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred             CceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence            3333333466679999998767788999987543   2245789999999885434  4568887777777899999997


Q ss_pred             C
Q 036177          220 N  220 (221)
Q Consensus       220 ~  220 (221)
                      +
T Consensus        99 G   99 (264)
T 1nd4_A           99 G   99 (264)
T ss_dssp             S
T ss_pred             C
Confidence            6

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=97.36  E-value=6.5e-05  Score=53.54  Aligned_cols=52  Identities=19%  Similarity=0.341  Sum_probs=29.2

Q ss_pred             cCCcccccCCCCCcc-c-ccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177            6 QCSLIFLLKKLRATD-I-DECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus         6 ~c~~~~~~~~~~c~~-~-~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      +|++||.  ...|.+ + ++|.. .+..|...|.+..++|.|.|+.||...+.. .|.
T Consensus        66 ~C~~Gf~--G~~Ce~~i~deC~~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~  120 (195)
T 1nfu_B           66 TCLEGFE--GKNCELFTRKLCSL-DNGDCDQFCHEEQNSVVCSCARGYTLADNGKACI  120 (195)
T ss_dssp             -----------------CCGGGT-GGGGCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             eCCCCce--eccccccccccccC-CCCCCCCEeECCCCCeEEECCCCceeCCCCCccc
Confidence            3567765  466886 5 78974 334676699999999999999999955443 454

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.33  E-value=0.00028  Score=38.96  Aligned_cols=36  Identities=36%  Similarity=0.791  Sum_probs=28.0

Q ss_pred             ccccccCCCCCCC--CCcee--ecCCceeeeCCCCccCCC
Q 036177           20 DIDECLDKEKYHC--EGKCK--NTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        20 ~~~~C~~~~~~~c--~~~C~--~~~~~~~C~C~~g~~~~~   55 (221)
                      |+++|.......|  .++|.  +..++|.|.|+.||.|..
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~   41 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDR   41 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSS
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCc
Confidence            6778865323467  47999  788999999999998875

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=97.31  E-value=0.00012  Score=47.66  Aligned_cols=51  Identities=18%  Similarity=0.341  Sum_probs=36.1

Q ss_pred             CCcccccCCCCCcccc---cccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177            7 CSLIFLLKKLRATDID---ECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus         7 c~~~~~~~~~~c~~~~---~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      |+.||..  ..|+++.   +|.. .+..|...|.+..++|.|.|+.||.+..+. .|.
T Consensus        39 C~~G~~G--~~C~~~~~~~~C~~-~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~   93 (114)
T 1aut_L           39 CRSGWEG--RFCQREVSFLNCSL-DNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCH   93 (114)
T ss_dssp             ECTTEES--TTSCEECCSSSSSS-GGGGCSSEEEECSSSEEEECCTTEEECTTSSCEE
T ss_pred             CCCCCcC--CCcCcCCcCCcCcC-CCCCCCCEeECCCCCEEeECCCCeeECCCCCccC
Confidence            5667643  3477654   5753 233666699999999999999999976654 453

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=97.31  E-value=0.0001  Score=44.86  Aligned_cols=35  Identities=49%  Similarity=1.083  Sum_probs=29.0

Q ss_pred             CCcccccccCCCCCCC-CCceeecCCceeeeCCCCccC
Q 036177           17 RATDIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYG   53 (221)
Q Consensus        17 ~c~~~~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~   53 (221)
                      .|.|+++|..+.  .| ++.|.+..++|.|.|+.||.+
T Consensus         1 sC~dideC~~~~--~C~~g~C~n~~g~y~C~C~~Gy~~   36 (82)
T 1emn_A            1 SAVDMDECKEPD--VCKHGQCINTDGSYRCECPFGYIL   36 (82)
T ss_dssp             CCCCCCSSSSTT--SCSSSEECCCSSCCCEECCTTEEE
T ss_pred             CCCccccCCCCC--CcCCCEEEecCCCEEEECCCCeEC
Confidence            378999997522  55 689999999999999999974

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=97.31  E-value=0.00019  Score=60.02  Aligned_cols=50  Identities=30%  Similarity=0.592  Sum_probs=41.5

Q ss_pred             ccCCcccccCCCCCcccccccCCCCCCC--CC---ceeecCCceeee-CCCCccCCC
Q 036177            5 SQCSLIFLLKKLRATDIDECLDKEKYHC--EG---KCKNTIGSYTCD-CPIGMYGDG   55 (221)
Q Consensus         5 ~~c~~~~~~~~~~c~~~~~C~~~~~~~c--~~---~C~~~~~~~~C~-C~~g~~~~~   55 (221)
                      ..|+.||..+...|+++++|.. .+..|  .+   .|.+..++|+|. |+.||.+..
T Consensus        28 ~~C~~GytGdg~~CeDiDEC~~-~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~   83 (634)
T 1yo8_A           28 GFCPVGFLGNGTHCEDLDECAL-VPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQ   83 (634)
T ss_dssp             CCCCTTBCSCSSSCCBCCTTTT-SCCCSCCCSSSCCEEECSSSEEECCCCTTEEECC
T ss_pred             CcCCCccCCCCCCccccccccC-CCCcccCCccccceeeccCceecccCCCCcccCc
Confidence            3689999888889999999974 33347  44   899999999998 999998765

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=97.26  E-value=0.0001  Score=49.39  Aligned_cols=48  Identities=19%  Similarity=0.326  Sum_probs=26.5

Q ss_pred             cCCcccccCCCCCcc-c-ccccCCCCCCCCCceeecCCceeeeCCCCccCCCc
Q 036177            6 QCSLIFLLKKLRATD-I-DECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus         6 ~c~~~~~~~~~~c~~-~-~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      +|++||.  ...|.+ + ++|.. .+..|...|.+..++|.|.|+.||.++++
T Consensus        66 ~C~~G~~--G~~C~~~i~d~C~~-~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~  115 (134)
T 2vh0_B           66 TCLEGFE--GKNCELFTRKLCSL-DNGDCDQFCHEEQNSVVCSCARGYTLADN  115 (134)
T ss_dssp             -----------------CCGGGT-GGGGCSSEEEEETTEEEEECCTTEEECTT
T ss_pred             eCCCCcc--CCccccCCCCcccc-CCCCCCCEeECCCCCEEEECCCCcEECCC
Confidence            3566665  456887 5 77864 23367669999999999999999985443

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.14  E-value=0.00041  Score=36.99  Aligned_cols=36  Identities=25%  Similarity=0.633  Sum_probs=27.1

Q ss_pred             ccccccCCCCCCC-CCceeecC--CceeeeCCCCccCCC
Q 036177           20 DIDECLDKEKYHC-EGKCKNTI--GSYTCDCPIGMYGDG   55 (221)
Q Consensus        20 ~~~~C~~~~~~~c-~~~C~~~~--~~~~C~C~~g~~~~~   55 (221)
                      ++++|.......| +|+|....  ++|.|.|+.||.|..
T Consensus         2 ~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~GytG~~   40 (46)
T 1k36_A            2 SITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVR   40 (46)
T ss_dssp             CEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCSSTT
T ss_pred             ccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCccCC
Confidence            4677865333467 68998744  689999999999876

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.13  E-value=0.00017  Score=41.01  Aligned_cols=37  Identities=30%  Similarity=0.632  Sum_probs=29.2

Q ss_pred             CCCcccccccCCCCCCC--C--CceeecCCceeeeCCCCcc-CCC
Q 036177           16 LRATDIDECLDKEKYHC--E--GKCKNTIGSYTCDCPIGMY-GDG   55 (221)
Q Consensus        16 ~~c~~~~~C~~~~~~~c--~--~~C~~~~~~~~C~C~~g~~-~~~   55 (221)
                      ..|+++++|.. .  +|  .  ++|.+..++|.|.|+.||. |..
T Consensus         6 ~~~~~~d~C~s-n--PC~nga~gtC~~~~g~y~C~C~~Gy~~G~~   47 (61)
T 2k2s_B            6 QLSETPAACSS-N--PCGPEAAGTCKETNSGYICRCNQGYRISLD   47 (61)
T ss_dssp             -CTTSCCHHHH-C--SSCSSSCCEEEECSSEEEEECCTTEEEEEC
T ss_pred             hhcCCCCcCcC-C--CCcCCCccccccCCCceEeECCCCCccCCC
Confidence            34778889974 3  46  3  6999999999999999998 754

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=97.10  E-value=0.00056  Score=42.44  Aligned_cols=43  Identities=23%  Similarity=0.763  Sum_probs=33.9

Q ss_pred             cCCcccccCCCCCc--ccccccCCCCCCC--CCceeecC--CceeeeCCCCccCCC
Q 036177            6 QCSLIFLLKKLRAT--DIDECLDKEKYHC--EGKCKNTI--GSYTCDCPIGMYGDG   55 (221)
Q Consensus         6 ~c~~~~~~~~~~c~--~~~~C~~~~~~~c--~~~C~~~~--~~~~C~C~~g~~~~~   55 (221)
                      +|++||.    .|+  ++++|.. .  +|  .+.|.+..  ++|+|.|+.||.|..
T Consensus        35 ~C~~G~~----~C~~~~~~~C~~-~--pC~ngg~C~~~~~~~~~~C~C~~G~~G~~   83 (91)
T 1tpg_A           35 WCNSGRA----QCHSVPVKSCSE-P--RCFNGGTCQQALYFSDFVCQCPEGFAGKS   83 (91)
T ss_dssp             ECSSSCC----BCCEECEEECSS-C--CSCTTCEEEEESSSSCEEEECCTTCBSSS
T ss_pred             ECCCCCc----ccccCcCCcccC-C--CCCCCCEeecCCCCCCeEeECCCCCcCCc
Confidence            4677775    675  7889974 3  46  58999987  899999999998865

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.07  E-value=0.0003  Score=41.42  Aligned_cols=27  Identities=44%  Similarity=0.886  Sum_probs=20.6

Q ss_pred             cccccccCCCCCCC--CCceeecCCceeee
Q 036177           19 TDIDECLDKEKYHC--EGKCKNTIGSYTCD   46 (221)
Q Consensus        19 ~~~~~C~~~~~~~c--~~~C~~~~~~~~C~   46 (221)
                      +|++||.. ....|  ...|.|+.|+|.|.
T Consensus         1 ~DidEC~~-~~~~C~~~~~C~Nt~Gsy~C~   29 (71)
T 2kl7_A            1 SDVNECLT-IPEACKGEMKCINHYGGYLCL   29 (71)
T ss_dssp             CCSCCTTC-CCCSCTTEEEEEETTCCEEEE
T ss_pred             CccccccC-CCCCCCCCCEeECCCCCeEec
Confidence            37889974 23356  46899999999998

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.00  E-value=0.00015  Score=54.37  Aligned_cols=37  Identities=19%  Similarity=0.722  Sum_probs=26.7

Q ss_pred             cccccccCCCCCCC--CCceeecCCceeeeCCCCccCCCc
Q 036177           19 TDIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        19 ~~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      .|++||.. ....|  +..|.|+.|+|.|.|+.||.+++.
T Consensus         3 ~DiDEC~~-~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~   41 (285)
T 1gl4_A            3 LAQQTCAN-NRHQCSVHAECRDYATGFCCRCVANYTGNGR   41 (285)
T ss_dssp             ----CHHH-HGGGSCTTEEEEECSSCEEEEECTTEEECSS
T ss_pred             ccchhccC-CCCCCCCCCEeEcCCCCeEEEcCCCCCCCCC
Confidence            47899973 22355  678999999999999999998774

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=96.99  E-value=0.00036  Score=38.18  Aligned_cols=32  Identities=19%  Similarity=0.514  Sum_probs=25.4

Q ss_pred             CCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           29 KYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        29 ~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      +..|...|.|+.|+|.|.|+.||...++. .|.
T Consensus         5 ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~   37 (51)
T 1kig_L            5 NGGCDQFCREERSEVRCSCAHGYVLGDDSKSCV   37 (51)
T ss_dssp             TTSSSSCCCEETTEECCCCCTTEEECTTSSCEE
T ss_pred             CCCcCCEeEcCCCCeEEeCCCCcEECCCCCccc
Confidence            34677789999999999999999865544 454

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=96.96  E-value=0.00022  Score=50.53  Aligned_cols=50  Identities=22%  Similarity=0.410  Sum_probs=39.6

Q ss_pred             cCCccccc---CCCCCccc--ccccCCCCC-CCCCceeecCCceeeeCCCCccCCCcc
Q 036177            6 QCSLIFLL---KKLRATDI--DECLDKEKY-HCEGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus         6 ~c~~~~~~---~~~~c~~~--~~C~~~~~~-~c~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      +|++||..   |...|+++  ++|..  .+ +-.+.|.+..++|+|.|+.||.++...
T Consensus       119 ~C~~Gy~g~~~~~~~C~~~~~~~C~~--~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~  174 (186)
T 1z1y_A          119 SCAIGXVPNPEDEXXCTXTGETACQL--XCNTDNEVCXNVEGVYXCQCMEGFTFDXEX  174 (186)
T ss_dssp             EECTEEEEETTTTTEEEEEECCCCCC--CCCTTTEEEEEETTEEEEEECTTCEEETTT
T ss_pred             ECCCCCcccCCCCCcceEcCCCcccc--cccccCcceecCCCCeeeECCCCCccCccc
Confidence            46889877   66889986  78873  22 227899999999999999999988744

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=96.91  E-value=0.0005  Score=42.13  Aligned_cols=35  Identities=43%  Similarity=0.855  Sum_probs=27.7

Q ss_pred             cccccccCCCCCCC-CCceeecCCceeeeCCCCccCC
Q 036177           19 TDIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGD   54 (221)
Q Consensus        19 ~~~~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~~   54 (221)
                      +|+++|.. .+..| ++.|.+..++|+|.|+.||.++
T Consensus         1 ~dideC~~-~~~~C~~g~C~n~~g~y~C~C~~Gy~~~   36 (86)
T 1lmj_A            1 TDIDECRI-SPDLCGRGQCVNTPGDFECKCDEGYESG   36 (86)
T ss_dssp             CCCCTTTT-CSSTTTTSCEEEETTEEEECCCSSEEEC
T ss_pred             CccccccC-CCCCCCCCEEECCCCCEEeeCCCCcCcc
Confidence            37889975 23346 5799999999999999999854

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=96.90  E-value=0.00065  Score=46.99  Aligned_cols=40  Identities=50%  Similarity=1.049  Sum_probs=31.0

Q ss_pred             cccccccCCCCCCC-CCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           19 TDIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        19 ~~~~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      +|+++|..+.  +| ++.|.++.++|+|.|+.||.+++.. .|.
T Consensus         1 ~dideC~~~~--~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~   42 (162)
T 1uzk_A            1 TDVNECLDPT--TCISGNCVNTPGSYICDCPPDFELNPTRVGCV   42 (162)
T ss_dssp             CCCCGGGSTT--SSBTSEEEEETTEEEEECCTTCEECTTSSBEE
T ss_pred             CccccCCCCC--CCCCCEeECCCCCEEEeCCCCCeECCCCCccc
Confidence            3789997533  55 7999999999999999999865433 443

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=96.79  E-value=0.0002  Score=50.78  Aligned_cols=50  Identities=20%  Similarity=0.450  Sum_probs=39.3

Q ss_pred             cCCccccc-CCCCCcccccccCCC-CCCC--CCceeecC-----CceeeeCCCCccCCC
Q 036177            6 QCSLIFLL-KKLRATDIDECLDKE-KYHC--EGKCKNTI-----GSYTCDCPIGMYGDG   55 (221)
Q Consensus         6 ~c~~~~~~-~~~~c~~~~~C~~~~-~~~c--~~~C~~~~-----~~~~C~C~~g~~~~~   55 (221)
                      +|++||.. +...|+|+++|.... ...|  .+.|.+..     ++|.|.|+.||.++.
T Consensus        28 ~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~   86 (186)
T 1z1y_A           28 MCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXE   86 (186)
T ss_dssp             EECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEET
T ss_pred             ECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCC
Confidence            46889966 467899999997421 3357  58999988     899999999998875

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=96.79  E-value=0.00077  Score=45.55  Aligned_cols=50  Identities=24%  Similarity=0.349  Sum_probs=34.5

Q ss_pred             cCCcccccCCCCCcc-cccccC--CCCCCCCCceeecCC-ceeeeCCCCccCCCcc
Q 036177            6 QCSLIFLLKKLRATD-IDECLD--KEKYHCEGKCKNTIG-SYTCDCPIGMYGDGKV   57 (221)
Q Consensus         6 ~c~~~~~~~~~~c~~-~~~C~~--~~~~~c~~~C~~~~~-~~~C~C~~g~~~~~~~   57 (221)
                      +|+.||.  ...|++ +++|..  ..+..|...|.+..+ +|.|.|+.||.++++.
T Consensus        71 ~C~~G~~--G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG  124 (142)
T 2c4f_L           71 FCLPAFE--GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG  124 (142)
T ss_dssp             ECCTTEE--STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTS
T ss_pred             eCCCCcc--CCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCC
Confidence            4677764  566876 577532  122345559999999 9999999999855443

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=96.76  E-value=0.00059  Score=57.16  Aligned_cols=49  Identities=24%  Similarity=0.579  Sum_probs=38.2

Q ss_pred             cCCcccccCC-------------CCCcccccccCCCCCCC--CCceeecC----CceeeeCCCCccCCC
Q 036177            6 QCSLIFLLKK-------------LRATDIDECLDKEKYHC--EGKCKNTI----GSYTCDCPIGMYGDG   55 (221)
Q Consensus         6 ~c~~~~~~~~-------------~~c~~~~~C~~~~~~~c--~~~C~~~~----~~~~C~C~~g~~~~~   55 (221)
                      .|+.||..+.             ..|.++++|.. ....|  .+.|.+..    ++|.|.|+.||.+++
T Consensus        74 ~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~-~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG  141 (634)
T 1yo8_A           74 PCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKD-KTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDG  141 (634)
T ss_dssp             CCCTTEEECCCEESSSHHHHSCCCCEEECCTTTT-TCCCCCTTEEEEECCTTCSSSEEEEECTTEEESS
T ss_pred             cCCCCcccCccccccccccccCCCcccccccccC-CCcccccCccccccccccccceeeeccCCccccC
Confidence            4888987543             34999999975 22356  58999988    999999999998853

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=96.74  E-value=0.0015  Score=43.60  Aligned_cols=21  Identities=33%  Similarity=0.877  Sum_probs=10.9

Q ss_pred             CCceeecCCceeeeCCCCccC
Q 036177           33 EGKCKNTIGSYTCDCPIGMYG   53 (221)
Q Consensus        33 ~~~C~~~~~~~~C~C~~g~~~   53 (221)
                      .+.|.+..++|.|.|+.||.+
T Consensus        56 ~~~C~~~~g~~~C~C~~G~~G   76 (135)
T 2vj3_A           56 DATCLDQIGEFQCICMPGYEG   76 (135)
T ss_dssp             SCEEEECSSCEEEECCTTEES
T ss_pred             CCEEeCCCCCceeeCCCCCcC
Confidence            345555555555555555544

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=96.69  E-value=0.0007  Score=43.34  Aligned_cols=43  Identities=28%  Similarity=0.541  Sum_probs=32.0

Q ss_pred             CCCcccccccCCCCCCCCCceeecCCceeeeCCCCccCCCccccc
Q 036177           16 LRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCR   60 (221)
Q Consensus        16 ~~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~~c~   60 (221)
                      ..| |+++|.. .+..|...|.+..++|.|.|+.||.+.+...|.
T Consensus        25 ~~C-d~neC~~-~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~   67 (107)
T 2w2n_E           25 GAM-GTNECLD-NNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCE   67 (107)
T ss_dssp             CCB-SCCGGGT-GGGGCSSEEECCSBSCEEECCTTCEEETTTEEE
T ss_pred             CCC-cCccCcC-CCCCCCCEeEeCCCCeEEECCCCccccCCCccc
Confidence            445 7899975 233677799999999999999999884322443

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=96.69  E-value=0.0013  Score=43.96  Aligned_cols=38  Identities=45%  Similarity=0.878  Sum_probs=30.1

Q ss_pred             CcccccccCCCCCCC--CCceeecCCceeeeCCCCccCCCc
Q 036177           18 ATDIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        18 c~~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      |+|+++|.. ....|  .+.|.+..++|.|.|+.||.++..
T Consensus         2 c~dideC~~-~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C   41 (135)
T 2vj3_A            2 AQDVDECSL-GANPCEHAGKCINTLGSFECQCLQGYTGPRC   41 (135)
T ss_dssp             -CCCCTTTS-SSCSSSTTCEEEECSSSEEEECCTTEESTTS
T ss_pred             CcccccccC-CCCCCCCCCEeECCCCCEEEECCCCCcCCcc
Confidence            678999974 22356  679999999999999999988753

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=96.69  E-value=0.00065  Score=41.73  Aligned_cols=36  Identities=42%  Similarity=0.831  Sum_probs=28.4

Q ss_pred             ccccccCCCCCCC-CCceeecCCceeeeCCCCccCCCc
Q 036177           20 DIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        20 ~~~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      |+++|... +..| .+.|.+..++|+|.|+.||.++..
T Consensus         2 dideC~~~-~~~C~~~~C~n~~g~y~C~C~~G~~~~~~   38 (87)
T 1z6c_A            2 DVDECSLK-PSICGTAVCKNIPGDFECECPEGYRYNLK   38 (87)
T ss_dssp             CSCSSSSS-SSSBTTSSCCCBTTBCCCSSSTTCEEETT
T ss_pred             ccccccCC-CCCCCCCEeECCCCCEEEECCCCceECCC
Confidence            68889752 2246 789999999999999999986543

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=96.68  E-value=0.0011  Score=45.62  Aligned_cols=44  Identities=39%  Similarity=0.792  Sum_probs=33.8

Q ss_pred             CCcccccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           17 RATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        17 ~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      .+.|+++|.......|...|.+..++++|.|+.||....+. .|.
T Consensus       113 ~~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~  157 (159)
T 1nzi_A          113 VATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG  157 (159)
T ss_dssp             EEEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             ecccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCccc
Confidence            36688899765445787899999999999999999866544 553

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=96.65  E-value=0.0011  Score=36.74  Aligned_cols=34  Identities=29%  Similarity=0.631  Sum_probs=25.5

Q ss_pred             ccccccCCCCCCC--CCcee-----ecCCceeeeCCCCccCCCc
Q 036177           20 DIDECLDKEKYHC--EGKCK-----NTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        20 ~~~~C~~~~~~~c--~~~C~-----~~~~~~~C~C~~g~~~~~~   56 (221)
                      ++++|.. .  +|  .|+|.     +..++|+|.|+.||.|...
T Consensus         7 ~~~eC~s-~--pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~C   47 (55)
T 3u7u_G            7 KCAEKEK-T--FCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRC   47 (55)
T ss_dssp             ECCSTTT-T--TSCTTCEEEEECCC--CCCEEEEECTTEESTTS
T ss_pred             cCCCCcC-C--CCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCc
Confidence            6788864 3  66  68995     4467899999999999863

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.62  E-value=0.0084  Score=45.29  Aligned_cols=75  Identities=17%  Similarity=0.146  Sum_probs=54.0

Q ss_pred             ccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-C--CceeeeeeEEEeCCeeEEEEEcc
Q 036177          142 YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-H--RNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +.....+|.|..+.||+..+.+|+.+.+|............|.+|+..|+.|. .  --+.+.++.    +..+++|||+
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l   92 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWV   92 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECC
T ss_pred             eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEee
Confidence            34456789999999999999999999999876544444456889999988773 2  123344443    2347899998


Q ss_pred             cC
Q 036177          219 LN  220 (221)
Q Consensus       219 ~~  220 (221)
                      +.
T Consensus        93 ~~   94 (288)
T 3f7w_A           93 DE   94 (288)
T ss_dssp             CC
T ss_pred             cc
Confidence            64

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=96.51  E-value=0.0018  Score=43.92  Aligned_cols=38  Identities=37%  Similarity=0.774  Sum_probs=25.4

Q ss_pred             CCCCcccccccCCCCCCC--CCceeecCCceeeeCCCCccCCC
Q 036177           15 KLRATDIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        15 ~~~c~~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      +..|.|+++|.. .  +|  .+.|.+..++|.|.|+.||.|..
T Consensus        42 ~~~c~dideC~~-~--pC~n~g~C~~~~~~y~C~C~~G~~G~~   81 (146)
T 1x7a_L           42 WKQYVDGDQCEP-N--PCLNGGLCKDDINSYECWCQVGFEGKN   81 (146)
T ss_dssp             --------CCSS-C--SSCTTCEEEECSSCEEEECCSSEESTT
T ss_pred             hccCCCcCcCCC-C--CCCCCCEeECCCCCEEEecCCCCcCCc
Confidence            456899999974 3  56  58999999999999999998765

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=96.41  E-value=0.0022  Score=44.60  Aligned_cols=46  Identities=30%  Similarity=0.696  Sum_probs=34.9

Q ss_pred             cCCcccccCCCCCc-ccccccCCCCCCC--CCceeec-CCceeeeCCCCccCCC
Q 036177            6 QCSLIFLLKKLRAT-DIDECLDKEKYHC--EGKCKNT-IGSYTCDCPIGMYGDG   55 (221)
Q Consensus         6 ~c~~~~~~~~~~c~-~~~~C~~~~~~~c--~~~C~~~-~~~~~C~C~~g~~~~~   55 (221)
                      +|.+||.  ...|+ ++++|....  .|  .+.|.+. .++++|.|+.||.|+.
T Consensus       117 ~C~~G~~--G~~C~~~~~~C~~~~--~C~~~g~C~~~~~~~~~C~C~~G~~G~~  166 (169)
T 2vj2_A          117 LCETNWG--GQLCDKDLNYCGTHQ--PCLNGGTCSNTGPDKYQCSCPEGYSGPN  166 (169)
T ss_dssp             EECTTEE--TTTTCEESCHHHHTC--CCCTTCEEEECSTTCEEEECCTTCCSTT
T ss_pred             eCCCCCC--CCcccCCCCCCCCCC--CCCCCCEEcCCCCCCcEeECCCCCcCcC
Confidence            4567765  35676 788887533  55  6899996 8899999999998875

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=96.40  E-value=0.0018  Score=45.05  Aligned_cols=44  Identities=32%  Similarity=0.710  Sum_probs=33.5

Q ss_pred             CCcccccccCCCC--CCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           17 RATDIDECLDKEK--YHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        17 ~c~~~~~C~~~~~--~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      .|.|+++|.....  ..|...|.|..|++.|.|+.||...++. .|.
T Consensus       120 ~~~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~  166 (170)
T 1szb_A          120 AAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCS  166 (170)
T ss_dssp             EEEECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             eccccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCccc
Confidence            4678899975331  2387799999999999999999866554 564

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=96.39  E-value=0.002  Score=43.72  Aligned_cols=36  Identities=42%  Similarity=0.844  Sum_probs=29.7

Q ss_pred             cccccccCCCCCCC-CCceeecCCceeeeCCCCccCCCcc
Q 036177           19 TDIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus        19 ~~~~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      .|+++|.. .  +| ++.|.+..++|+|.|+.||.++...
T Consensus         2 ~dideC~~-~--pC~ng~C~n~~g~y~C~C~~G~~g~~~~   38 (147)
T 2w86_A            2 ADIDECES-S--PCINGVCKNSPGSFICECSSESTLDPTK   38 (147)
T ss_dssp             CCCCGGGG-C--CSBTSEEEEETTEEEEECCTTEEECTTS
T ss_pred             CcCccCcC-C--CCCCCEeECCCCCEEeECCCCcccCCCC
Confidence            37889975 3  56 6899999999999999999987644

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=96.34  E-value=0.0016  Score=35.78  Aligned_cols=30  Identities=27%  Similarity=0.604  Sum_probs=24.2

Q ss_pred             CCCCceeecCC-ceeeeCCCCccCCCcc-ccc
Q 036177           31 HCEGKCKNTIG-SYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        31 ~c~~~C~~~~~-~~~C~C~~g~~~~~~~-~c~   60 (221)
                      .|...|.++.+ +|.|.|+.||...++. .|.
T Consensus         8 gC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~   39 (53)
T 2bz6_L            8 GCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT   39 (53)
T ss_dssp             GCSSEEEEETTTEEEEECCTTEEECTTSSCEE
T ss_pred             CcCCEeEcCCCCCEEeeCCCCCEECCCCCccc
Confidence            67778999998 7999999999876554 454

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=96.32  E-value=0.0035  Score=33.11  Aligned_cols=25  Identities=44%  Similarity=0.957  Sum_probs=20.7

Q ss_pred             CC--CCcee--ecCCceeeeCCCCccCCC
Q 036177           31 HC--EGKCK--NTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        31 ~c--~~~C~--~~~~~~~C~C~~g~~~~~   55 (221)
                      +|  .++|.  +..++|+|.|+.||.|..
T Consensus        10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~   38 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCNCVIGYSGDR   38 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEECCTTEETTT
T ss_pred             CCCCCCEEEeecCCCCEEEEcCCCCcCCc
Confidence            45  57898  577899999999998875

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=96.31  E-value=0.0021  Score=36.23  Aligned_cols=31  Identities=29%  Similarity=0.620  Sum_probs=25.0

Q ss_pred             CCCCCceeecC-CceeeeCCCCccCCCcc-ccc
Q 036177           30 YHCEGKCKNTI-GSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        30 ~~c~~~C~~~~-~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      ..|...|.++. |+|.|.|+.||...++. .|.
T Consensus         7 ggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~   39 (59)
T 2wph_E            7 GRCEQFCKNSADNKVVCSCTEGYRLAENQKSCE   39 (59)
T ss_dssp             GGCSSEEEECSTTCEEEECCTTEEECTTSSCEE
T ss_pred             CCcCCEeEeCCCCCEEeeCCCCcEECCCCCccc
Confidence            36777999998 69999999999876655 564

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.20  E-value=0.0091  Score=46.58  Aligned_cols=75  Identities=13%  Similarity=0.254  Sum_probs=51.9

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEecc--CCC-cccHHHHHHHHHHHHcCC--CCceeeeeeEEEeC---CeeEEEEE
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSK--SVH-ESNVEQFINEVVILSQIN--HRNVVKLLGCCLET---EVPLLVYE  216 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~l~g~~~~~---~~~~lv~e  216 (221)
                      .+.++.|.++.+|+.... +..+++|...  ... ......+.+|..+|+.+.  +..+.++++.+...   +..++|||
T Consensus        43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            456889999999998874 4567788765  322 122356889999999886  45577888887665   34799999


Q ss_pred             cccC
Q 036177          217 FILN  220 (221)
Q Consensus       217 ~~~~  220 (221)
                      |+++
T Consensus       122 ~v~G  125 (359)
T 3dxp_A          122 FVSG  125 (359)
T ss_dssp             CCCC
T ss_pred             ecCC
Confidence            9975

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=95.82  E-value=0.0045  Score=40.25  Aligned_cols=34  Identities=29%  Similarity=0.654  Sum_probs=27.7

Q ss_pred             cccccccCCCCCCCCCceeec-CCceeeeCCCCccCCC
Q 036177           19 TDIDECLDKEKYHCEGKCKNT-IGSYTCDCPIGMYGDG   55 (221)
Q Consensus        19 ~~~~~C~~~~~~~c~~~C~~~-~~~~~C~C~~g~~~~~   55 (221)
                      +|+++|.. .  .|..+|.+. .++|+|.|+.||.++.
T Consensus         2 ~dideC~~-~--pC~~~C~~~~~g~y~C~C~~Gy~g~~   36 (118)
T 1dx5_I            2 EPVDPCFR-A--NCEYQCQPLDQTSYLCVCAEGFAPIP   36 (118)
T ss_dssp             CCCCGGGG-C--CCSSEEEECSSSCEEEECCTTEEEET
T ss_pred             CccccCCC-C--CCCCCCCCCCCCCEEeECCCCccccC
Confidence            37888953 2  665699999 8999999999998875

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=95.76  E-value=0.0043  Score=40.07  Aligned_cols=38  Identities=39%  Similarity=0.781  Sum_probs=24.9

Q ss_pred             CcccccccCCC-----CCCC--CCceeecCCceeeeCCCCccCCC
Q 036177           18 ATDIDECLDKE-----KYHC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        18 c~~~~~C~~~~-----~~~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      +.|+++|....     ...|  .++|.+..++|+|.|+.||.++.
T Consensus         3 ~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~   47 (114)
T 1aut_L            3 HVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRF   47 (114)
T ss_dssp             -----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTT
T ss_pred             ceecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCC
Confidence            45677776421     0124  67999999999999999998876

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=95.70  E-value=0.0051  Score=46.53  Aligned_cols=41  Identities=27%  Similarity=0.520  Sum_probs=30.6

Q ss_pred             ccccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        20 ~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      |.+||....+..|...|.++.+++.|.|+.||....+. .|.
T Consensus         1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~   42 (283)
T 3f1s_B            1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCV   42 (283)
T ss_dssp             --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEE
T ss_pred             CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccc
Confidence            46788754356898899999999999999999765544 443

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=95.65  E-value=0.0036  Score=48.83  Aligned_cols=38  Identities=29%  Similarity=0.714  Sum_probs=22.7

Q ss_pred             cccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           21 IDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        21 ~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      ++||.  .+..|+..|.|+.|+|.|.|+.||...++. .|.
T Consensus         1 i~ec~--~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~   39 (349)
T 3v64_C            1 VNECA--EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCK   39 (349)
T ss_dssp             ----------CCSSEECCC---CCEECCTTEEECTTSSCEE
T ss_pred             CcccC--CCCCCcCeeecCCCCeEEECCCCccCCCCCCccc
Confidence            47886  345898899999999999999999876654 564

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=95.63  E-value=0.002  Score=45.89  Aligned_cols=38  Identities=39%  Similarity=0.861  Sum_probs=0.0

Q ss_pred             CCCCcccccccCCCCCCC--CCceeecCCceeeeCCCCccCCC
Q 036177           15 KLRATDIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        15 ~~~c~~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      +..|.|+++|.. .  +|  .+.|.+..++|.|.|+.||.|..
T Consensus        36 w~~c~dideC~~-~--pC~ngg~C~n~~g~y~C~C~~Gf~G~~   75 (195)
T 1nfu_B           36 WNKYKDGDQCET-S--PCQNQGKCKDGLGEYTCTCLEGFEGKN   75 (195)
T ss_dssp             -------------------------------------------
T ss_pred             cccCCCCcccCC-C--CCCCCCEeECCCCCeeEeCCCCceecc
Confidence            456899999974 3  56  57999999999999999998764

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=95.58  E-value=0.058  Score=41.34  Aligned_cols=73  Identities=16%  Similarity=0.089  Sum_probs=55.9

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC---CCceeeeeeEEEeCCeeEEEEEcccCC
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN---HRNVVKLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      .+.|+.|.+..+|+-.. ++..+.+|.....   ....|.+|...|+.|.   ...+.+.++.....+..++||||+++.
T Consensus        41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~  116 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS  116 (312)
T ss_dssp             EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred             eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence            45688999999999876 4667788876432   3567889999888773   356778888777777889999999863

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=95.58  E-value=0.0071  Score=40.72  Aligned_cols=36  Identities=33%  Similarity=0.748  Sum_probs=29.8

Q ss_pred             CCcccccccCCCCCCC--CCceeecCCceeeeCCCCccCCC
Q 036177           17 RATDIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        17 ~c~~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      .|.|+++|.. .  +|  .+.|.+..++|.|.|+.||.|..
T Consensus        43 ~c~did~C~~-~--pC~n~g~C~~~~g~y~C~C~~G~~G~~   80 (142)
T 2c4f_L           43 SYSDGDQCAS-S--PCQNGGSCKDQLQSYICFCLPAFEGRN   80 (142)
T ss_dssp             HHTTCCGGGG-C--CCCTTCEEEEETTEEEEECCTTEESTT
T ss_pred             cCCccCcCcC-C--CcCCCCEEeCCCCCEEeeCCCCccCCc
Confidence            4678899974 3  56  57999999999999999998765

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=95.58  E-value=0.0047  Score=32.22  Aligned_cols=7  Identities=43%  Similarity=0.629  Sum_probs=2.5

Q ss_pred             HHHHHHH
Q 036177           75 LGLLFLL   81 (221)
Q Consensus        75 ~~~~~~~   81 (221)
                      +++++++
T Consensus        21 v~~~~ii   27 (44)
T 2ks1_B           21 LLLLLVV   27 (44)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            3333333

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=95.41  E-value=0.0082  Score=32.91  Aligned_cols=34  Identities=29%  Similarity=0.817  Sum_probs=24.5

Q ss_pred             cccCCCCCCC--CCcee--ecCCceeeeCCCCccCCCc
Q 036177           23 ECLDKEKYHC--EGKCK--NTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        23 ~C~~~~~~~c--~~~C~--~~~~~~~C~C~~g~~~~~~   56 (221)
                      .|.......|  .|+|.  +..+++.|.|+.||.|...
T Consensus         5 ~C~~~~~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~C   42 (53)
T 1nql_B            5 ECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERC   42 (53)
T ss_dssp             ECCSTTCCEECTTCEEEEETTTTEEEEEECTTEESTTS
T ss_pred             ccCCCCCCCCCCCeEEeeecCCCCEEEecCCCCcCCCC
Confidence            4544333466  47898  5667899999999999864

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=95.36  E-value=0.0028  Score=50.19  Aligned_cols=35  Identities=23%  Similarity=0.493  Sum_probs=0.0

Q ss_pred             ccccccCCCCCCCCCceeecCCceeeeCCCCccCCC
Q 036177           20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        20 ~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      |+++|.. .+..|...|.+..|+|.|.|+.||..++
T Consensus         2 ~~~~C~~-~~~~c~~~C~~~~g~~~C~C~~G~~l~~   36 (386)
T 3v65_B            2 GEENCNV-NNGGCAQKCQMIRGAVQCTCHTGYRLTE   36 (386)
T ss_dssp             ------------------------------------
T ss_pred             CcCcccC-CCCCCCCCCcCCCCCcEeECCCCceECC
Confidence            6889965 4457877998899999999999998443

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=95.34  E-value=0.0015  Score=53.00  Aligned_cols=60  Identities=10%  Similarity=0.056  Sum_probs=17.2

Q ss_pred             cceecccCceEEEEEEeCC-CcEEEE------EeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe
Q 036177          145 SRIIGQGGQGTVFKGMLTD-GRIVAV------KKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLE  207 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~-~~~vav------k~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~  207 (221)
                      .+.+|   ||.||+|.+.. ...||+      |..+.  .+......|.+|+.++..++|||+++..+....
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            45566   99999999743 357888      66654  233345679999999999999999999887653

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=95.30  E-value=0.003  Score=42.15  Aligned_cols=38  Identities=39%  Similarity=0.861  Sum_probs=0.0

Q ss_pred             CCCCcccccccCCCCCCC--CCceeecCCceeeeCCCCccCCC
Q 036177           15 KLRATDIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        15 ~~~c~~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      +..|.|+++|.. .  +|  .+.|.+..++|.|.|+.||.|..
T Consensus        36 ~~~c~d~d~C~~-~--pC~n~g~C~~~~~~y~C~C~~G~~G~~   75 (134)
T 2vh0_B           36 WNKYKDGDQCET-S--PCQNQGKCKDGLGEYTCTCLEGFEGKN   75 (134)
T ss_dssp             -------------------------------------------
T ss_pred             cccCCCcCcCCC-C--CCCCcCCcccCCCCEEeeCCCCccCCc
Confidence            456889999974 3  46  57999999999999999998654

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=95.11  E-value=0.02  Score=38.41  Aligned_cols=36  Identities=33%  Similarity=0.743  Sum_probs=24.9

Q ss_pred             cccccccCCCCCCCCCcee-------ecCCceeeeCCCCccCCC
Q 036177           19 TDIDECLDKEKYHCEGKCK-------NTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        19 ~~~~~C~~~~~~~c~~~C~-------~~~~~~~C~C~~g~~~~~   55 (221)
                      .++++|.. ..+.-.+.|.       +..++|.|.|+.||.+..
T Consensus        50 ~~~~~C~~-~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~   92 (143)
T 4d90_A           50 TSAGPCTP-NPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIH   92 (143)
T ss_dssp             CCCCTTSS-CCCCTTCEEEECCCEETTEECCEEEECCTTEESTT
T ss_pred             ccCCcCCC-CCCCCCCEecCCCccccCCCCCeEeECcCCCcCCC
Confidence            34566643 2222267898       667899999999998765

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=94.95  E-value=0.012  Score=46.82  Aligned_cols=31  Identities=35%  Similarity=0.758  Sum_probs=25.4

Q ss_pred             ccccCCCCCCCCCceeecCCceeeeCCCCccC
Q 036177           22 DECLDKEKYHCEGKCKNTIGSYTCDCPIGMYG   53 (221)
Q Consensus        22 ~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~   53 (221)
                      +||.. .++.|...|.+..++|.|.|+.||.+
T Consensus         1 ~eC~~-~~~~c~~~C~~~~~~y~C~C~~G~~~   31 (400)
T 3p5b_L            1 NECLD-NNGGCSHVCNDLKIGYECLCPDGFQL   31 (400)
T ss_dssp             CCTTT-TGGGCSSEEEECSSSEEEECCTTEEE
T ss_pred             CcccC-CCCCCCCEeECCCCCeEEECCCCCCc
Confidence            46754 34577889999999999999999984

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=94.83  E-value=0.06  Score=42.52  Aligned_cols=74  Identities=19%  Similarity=0.247  Sum_probs=47.7

Q ss_pred             cceecccCceEEEEEEeC-CCcEEEEEeccCCCc-------ccHHHHHHHHHHHHcCC-C-Cce-eeeeeEEEeCCeeEE
Q 036177          145 SRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHE-------SNVEQFINEVVILSQIN-H-RNV-VKLLGCCLETEVPLL  213 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~-------~~~~~~~~e~~~l~~l~-h-~ni-v~l~g~~~~~~~~~l  213 (221)
                      .+.+|.|.++.||+.... .+..+++|...+...       .....+..|.++|+.+. + |.. .+++..  ..+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            457899999999999753 467899997643211       12345778998888763 2 333 345543  3455689


Q ss_pred             EEEcccC
Q 036177          214 VYEFILN  220 (221)
Q Consensus       214 v~e~~~~  220 (221)
                      ||||+++
T Consensus       113 vmE~l~g  119 (397)
T 2olc_A          113 VMEDLSH  119 (397)
T ss_dssp             EECCCTT
T ss_pred             EEEeCCC
Confidence            9999864

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=94.41  E-value=0.037  Score=47.38  Aligned_cols=33  Identities=33%  Similarity=0.707  Sum_probs=26.1

Q ss_pred             ccccccCCCCCCCCCceeecCCceeeeCCCCccC
Q 036177           20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYG   53 (221)
Q Consensus        20 ~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~   53 (221)
                      ++++|.. .+..|...|.+..++|.|.|+.||.+
T Consensus       293 ~~~eC~~-~~~~C~~~C~~~~~~~~C~C~~G~~~  325 (699)
T 1n7d_A          293 GTNECLD-NNGGCSHVCNDLKIGYECLCPDGFQL  325 (699)
T ss_dssp             CCCCTTS-STTTSCTTCCCCTTCCCCCCCSSSCC
T ss_pred             ccccccc-cccCcCCCcccCCCCcEEeCCCCeEc
Confidence            4667754 23467789999999999999999985

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=94.01  E-value=0.02  Score=31.19  Aligned_cols=23  Identities=30%  Similarity=0.951  Sum_probs=18.4

Q ss_pred             CCceee----cCCceeeeCCCCccCCC
Q 036177           33 EGKCKN----TIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        33 ~~~C~~----~~~~~~C~C~~g~~~~~   55 (221)
                      .|+|.+    ..+++.|.|+.||.|..
T Consensus        19 GGtC~~~~~~~~~~y~C~C~~Gf~G~~   45 (52)
T 3ca7_A           19 DAHCFAVKIADLPVYSCECAIGFMGQR   45 (52)
T ss_dssp             TCEEEEEEETTEEEEEEECCTTEESTT
T ss_pred             CCEEecCccCCCCCEEEECCCCCcCCC
Confidence            468886    24578999999999875

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=93.92  E-value=0.019  Score=32.62  Aligned_cols=26  Identities=31%  Similarity=0.750  Sum_probs=21.3

Q ss_pred             CC--CCceee-----cCCceeeeCCCCccCCCc
Q 036177           31 HC--EGKCKN-----TIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        31 ~c--~~~C~~-----~~~~~~C~C~~g~~~~~~   56 (221)
                      +|  .|+|.+     ..++|.|.|+.||.|...
T Consensus        13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~C   45 (63)
T 1hae_A           13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARC   45 (63)
T ss_dssp             TSCTTCEEEEEESSSSSCCEEEECCTTEESTTS
T ss_pred             cCCCCcEEecCCccCCCCCEEEECCCCCcCCcc
Confidence            45  579986     568899999999998764

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=93.79  E-value=0.036  Score=42.42  Aligned_cols=41  Identities=24%  Similarity=0.557  Sum_probs=29.7

Q ss_pred             ccccccCC--CCCCCCCceeecC------CceeeeCCCCccCCCcc-ccc
Q 036177           20 DIDECLDK--EKYHCEGKCKNTI------GSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        20 ~~~~C~~~--~~~~c~~~C~~~~------~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      +.+.|...  .+..|+..|.+.+      ++++|.||+||....+. .|.
T Consensus       266 ~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~  315 (316)
T 1ijq_A          266 GVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL  315 (316)
T ss_dssp             CCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred             ccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence            56778642  1447888998865      58999999999877655 564

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=93.42  E-value=0.41  Score=35.33  Aligned_cols=68  Identities=16%  Similarity=0.171  Sum_probs=48.1

Q ss_pred             ccCce-EEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-CCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          150 QGGQG-TVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       150 ~G~fg-~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      .|..+ .||+-... ++..+.+|.-..   .....+.+|...|+.+. +--+.++++.+...+..++|||++++
T Consensus        34 ~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G  104 (272)
T 4gkh_A           34 VGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPG  104 (272)
T ss_dssp             CSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCS
T ss_pred             CCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCC
Confidence            34333 58877643 456688887643   23556889999998773 43466778888888889999999875

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=93.37  E-value=0.046  Score=46.15  Aligned_cols=41  Identities=24%  Similarity=0.638  Sum_probs=32.4

Q ss_pred             ccccccCCCCCCCCCceeecC-CceeeeCCCCccCCCcc-cccc
Q 036177           20 DIDECLDKEKYHCEGKCKNTI-GSYTCDCPIGMYGDGKV-GCRG   61 (221)
Q Consensus        20 ~~~~C~~~~~~~c~~~C~~~~-~~~~C~C~~g~~~~~~~-~c~~   61 (221)
                      +.++|.. .+..|+..|.+.+ ++++|.|+.||....+. .|..
T Consensus       264 ~~n~C~~-~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~  306 (628)
T 4a0p_A          264 GWNECAS-SNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSA  306 (628)
T ss_dssp             CCCTTTT-TGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred             cceEecc-CCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence            5778864 3457888999988 99999999999876655 6754

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=93.31  E-value=0.044  Score=47.56  Aligned_cols=32  Identities=34%  Similarity=0.728  Sum_probs=23.5

Q ss_pred             cccccCCCCCCCCCceeecCCceeeeCCCCccC
Q 036177           21 IDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYG   53 (221)
Q Consensus        21 ~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~   53 (221)
                      +++|.. .+..|...|.+..++|.|.|+.||.+
T Consensus       312 ~~~C~~-~~~~C~~~C~~~~~~y~C~C~~Gy~l  343 (791)
T 3m0c_C          312 TNECLD-NNGGCSHVCNDLKIGYECLCPDGFQL  343 (791)
T ss_dssp             CCSTTT-GGGGCSSEEEECSBSEEEECCTTCEE
T ss_pred             cccccc-cccCccccccCCCCCcccCCCCCCcc
Confidence            445543 22356668999999999999999963

>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=93.04  E-value=0.035  Score=33.11  Aligned_cols=31  Identities=16%  Similarity=0.328  Sum_probs=12.7

Q ss_pred             EeeechhhhHHHHHHHHHHHHHHHHHHHHHh
Q 036177           66 TIVAGCVVVLGLLFLLPIGLWRWYKFIKRRR   96 (221)
Q Consensus        66 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (221)
                      +++.+++++++++.+++++++.++...+.||
T Consensus        12 ~Iv~gvi~gilliGllllliwk~~~~i~Drr   42 (79)
T 2knc_B           12 VVLLSVMGAILLIGLAALLIWKLLITIHDRK   42 (79)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444444444444444344444333333333

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=91.63  E-value=0.11  Score=39.76  Aligned_cols=34  Identities=32%  Similarity=0.850  Sum_probs=25.3

Q ss_pred             ccccccCCCCCCC--CCceeecCCceeeeCCCCccCCCc
Q 036177           20 DIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        20 ~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      |+++|.. .  +|  .+.|.+..++|.|.|+.||.++.+
T Consensus         4 d~~~C~~-~--pC~~~g~C~~~~~~~~C~C~~g~~g~~C   39 (317)
T 3h5c_B            4 GGSPCIS-Q--PCLHNGSCQDSIWGYTCTCSPGYEGSNC   39 (317)
T ss_dssp             --CCTTS-C--CCTTTCCCCCCSSSCCCCCSSSCCSSSS
T ss_pred             cCCcCCC-C--CCCCCCEeECCCCCeEEECCCCCcCCcc
Confidence            6677864 2  45  578999999999999999987543

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=91.51  E-value=0.14  Score=39.29  Aligned_cols=41  Identities=22%  Similarity=0.413  Sum_probs=29.7

Q ss_pred             cccccCCCCCCCCCceeecCC--ceeeeCCCCccCCCcc-cccce
Q 036177           21 IDECLDKEKYHCEGKCKNTIG--SYTCDCPIGMYGDGKV-GCRGF   62 (221)
Q Consensus        21 ~~~C~~~~~~~c~~~C~~~~~--~~~C~C~~g~~~~~~~-~c~~~   62 (221)
                      .+.|.. .+..|+..|-..++  +++|.||+||....+. .|...
T Consensus       267 ~n~C~~-~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~  310 (318)
T 3sov_A          267 TNPCGI-DNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDG  310 (318)
T ss_dssp             CCTTTT-TGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred             cccccc-CCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence            466753 34578888988765  6899999999877665 67643

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=91.26  E-value=0.21  Score=38.63  Aligned_cols=76  Identities=4%  Similarity=0.021  Sum_probs=50.0

Q ss_pred             ccee-cccCceEEEEEEeC-------CCcEEEEEeccCCC---cccHHHHHHHHHHHHcCC-C--CceeeeeeEEEeC--
Q 036177          145 SRII-GQGGQGTVFKGMLT-------DGRIVAVKKSKSVH---ESNVEQFINEVVILSQIN-H--RNVVKLLGCCLET--  208 (221)
Q Consensus       145 ~~~l-g~G~fg~v~~~~~~-------~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~-h--~niv~l~g~~~~~--  208 (221)
                      .+.| +.|....+|+....       ++..+.+|......   ......+.+|..+|+.+. +  -.+.++++.....  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            3566 78888899987653       25677888764422   111245778888888773 2  3466777766544  


Q ss_pred             -CeeEEEEEcccC
Q 036177          209 -EVPLLVYEFILN  220 (221)
Q Consensus       209 -~~~~lv~e~~~~  220 (221)
                       +..++||||+++
T Consensus       105 ~g~~~~v~e~l~G  117 (357)
T 3ats_A          105 LGTPFFLMDYVEG  117 (357)
T ss_dssp             TSSCEEEEECCCC
T ss_pred             cCCceEEEEecCC
Confidence             356899999875

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=91.24  E-value=0.092  Score=44.26  Aligned_cols=40  Identities=25%  Similarity=0.556  Sum_probs=31.7

Q ss_pred             ccccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        20 ~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      ..+.|.. .+..|...|.+.++++.|.|+.||....+. .|.
T Consensus       577 ~~~~C~~-~ng~C~~~C~~~~~~~~C~C~~g~~l~~d~~~C~  617 (619)
T 3s94_A          577 GSNPCAE-ENGGCSHLCLYRPQGLRCACPIGFELISDMKTCI  617 (619)
T ss_dssp             CCCGGGS-GGGGCSSEEEEETTEEEEECCTTCEECSSTTCEE
T ss_pred             ccccCCC-CCCChhHhhccCCCCeEEECCCCCEECCCCCcCC
Confidence            5677864 345788899999999999999999876655 664

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=90.82  E-value=0.12  Score=35.28  Aligned_cols=26  Identities=50%  Similarity=1.172  Sum_probs=22.8

Q ss_pred             CC--CCceeecCCceeeeCCCCccCCCc
Q 036177           31 HC--EGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        31 ~c--~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      +|  .+.|.+..++++|.|+.||.|..+
T Consensus       126 ~C~~~g~C~~~~~~~~c~C~~g~~G~~C  153 (162)
T 1g1s_A          126 SCSKQGECLETIGNYTCSCYPGFYGPEC  153 (162)
T ss_dssp             GGGGSEEEEECSSSEEEEECTTEESTTS
T ss_pred             CCCCCCEEecCCCCceEeCCCCCcCccc
Confidence            55  689999999999999999998763

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=90.77  E-value=0.92  Score=34.34  Aligned_cols=70  Identities=11%  Similarity=0.134  Sum_probs=47.4

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCC---ceeeeeeEEE-eCCeeEEEEEcccC
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHR---NVVKLLGCCL-ETEVPLLVYEFILN  220 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~g~~~-~~~~~~lv~e~~~~  220 (221)
                      ...++.|....+|+.    +..+++|..+  .......+.+|..+|..+.+.   .+.+.+.... ..+..+++|||+++
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            345788888888876    4557777642  223346789999999988542   2455555553 34457899999875

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=90.67  E-value=0.32  Score=26.06  Aligned_cols=34  Identities=26%  Similarity=0.767  Sum_probs=23.0

Q ss_pred             ccccCCCCCCC-CCceee--cCCceeeeCCCCccCCC
Q 036177           22 DECLDKEKYHC-EGKCKN--TIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        22 ~~C~~~~~~~c-~~~C~~--~~~~~~C~C~~g~~~~~   55 (221)
                      +.|...-..-| +|+|..  ..+...|.|+.+|.|+.
T Consensus        10 ~~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy~G~R   46 (50)
T 2rnl_A           10 NPCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYFGER   46 (50)
T ss_dssp             CTTTTTGGGTCSSSEEEEETTTTEEEEECCSSCCSSS
T ss_pred             cccCchhhCcCCCCEEEEecCCCCeeEECCCCccccc
Confidence            34543222345 789984  45678899999999886

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=90.60  E-value=0.23  Score=26.61  Aligned_cols=33  Identities=27%  Similarity=0.686  Sum_probs=23.0

Q ss_pred             cccCCCCCCC-CCceee--cCCceeeeCCCCccCCC
Q 036177           23 ECLDKEKYHC-EGKCKN--TIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        23 ~C~~~~~~~c-~~~C~~--~~~~~~C~C~~g~~~~~   55 (221)
                      .|...-..-| +|.|..  ..+.+.|.|+.||.|..
T Consensus         7 ~C~~~~~~yC~nG~C~~~~~~~~~~C~C~~gy~G~R   42 (50)
T 3e50_C            7 DCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGAR   42 (50)
T ss_pred             ccChhhcCcccCCEEeeccCCCCeEEECCCCCcccC
Confidence            3443233456 778876  34678899999999987

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=90.15  E-value=0.21  Score=26.76  Aligned_cols=27  Identities=26%  Similarity=0.623  Sum_probs=20.4

Q ss_pred             CCC-CCceee--cCCceeeeCCCCccCCCc
Q 036177           30 YHC-EGKCKN--TIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        30 ~~c-~~~C~~--~~~~~~C~C~~g~~~~~~   56 (221)
                      .-| +|.|..  ..+.+.|.|+.||.|...
T Consensus        14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~RC   43 (50)
T 1iox_A           14 HYCIKGRCRFVVAEQTPSCVCDEGYIGARC   43 (50)
T ss_dssp             TSCTTCCEEEETTTTEEEECCCTTEETTTT
T ss_pred             CcccCCEEEeEcCCCCeEEECCCCcccCCC
Confidence            355 678864  456788999999999863

>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=89.32  E-value=0.013  Score=47.87  Aligned_cols=31  Identities=16%  Similarity=-0.071  Sum_probs=25.8

Q ss_pred             cHHHHHHHHHHHHcCCCCceeeeeeEEEeCC
Q 036177          179 NVEQFINEVVILSQINHRNVVKLLGCCLETE  209 (221)
Q Consensus       179 ~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~  209 (221)
                      ..++|..|++++.+++|+|+|+++|+|....
T Consensus       322 g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~  352 (487)
T 3oja_A          322 GSETERLECERENQARQREIDALKEQYRTVI  352 (487)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             cHHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence            3568999999999999999999999997654

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=89.13  E-value=0.066  Score=27.86  Aligned_cols=18  Identities=33%  Similarity=0.414  Sum_probs=7.2

Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 036177           78 LFLLPIGLWRWYKFIKRR   95 (221)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~   95 (221)
                      +++++++...++.+.++|
T Consensus        21 v~~~~ii~~~~~~~~RRr   38 (44)
T 2ks1_B           21 LLLLLVVALGIGLFMRRR   38 (44)
T ss_dssp             HHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhhhh
Confidence            444444443333333333

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=88.16  E-value=0.14  Score=31.77  Aligned_cols=47  Identities=19%  Similarity=0.455  Sum_probs=34.3

Q ss_pred             ccCCcccccCCCCCccc--ccccCCCCCCC--CCceeecC-----CceeeeCCCCcc
Q 036177            5 SQCSLIFLLKKLRATDI--DECLDKEKYHC--EGKCKNTI-----GSYTCDCPIGMY   52 (221)
Q Consensus         5 ~~c~~~~~~~~~~c~~~--~~C~~~~~~~c--~~~C~~~~-----~~~~C~C~~g~~   52 (221)
                      -+|..||..|...|..+  ..|.. .+..|  +..|....     +...|.|..++.
T Consensus        28 C~C~~gy~gdg~~Cv~~~~~sC~~-nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           28 CKCLLNYKQEGDKCVENPNPTCNE-NNGGCDADAKCTEEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             EEECTTEEEETTEEEECSCCCSTT-GGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred             EEecCCeecCCCeEeeCCCCChhh-cCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence            35788888888888876  47864 23355  67888764     567899999874

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=88.05  E-value=0.36  Score=40.05  Aligned_cols=34  Identities=29%  Similarity=0.790  Sum_probs=27.1

Q ss_pred             cccccCCCCCCC--CCceee-cCCceeeeCC-CCccCCCcc
Q 036177           21 IDECLDKEKYHC--EGKCKN-TIGSYTCDCP-IGMYGDGKV   57 (221)
Q Consensus        21 ~~~C~~~~~~~c--~~~C~~-~~~~~~C~C~-~g~~~~~~~   57 (221)
                      +++|.. .  +|  .|.|.+ ..++|+|.|+ .||.|..+.
T Consensus         2 ~d~C~~-~--PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce   39 (553)
T 1q4g_A            2 VNPCCY-Y--PCQHQGICVRFGLDRYQCDCTRTGYSGPNCT   39 (553)
T ss_dssp             CCGGGG-C--CCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred             CCcCCC-C--CCCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence            467764 3  56  689999 8899999999 999998743

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=87.83  E-value=0.28  Score=30.63  Aligned_cols=46  Identities=20%  Similarity=0.350  Sum_probs=35.1

Q ss_pred             cCCcccccCCCCCccccc-ccCCCCCCC--CCceeecC-CceeeeCCCCcc
Q 036177            6 QCSLIFLLKKLRATDIDE-CLDKEKYHC--EGKCKNTI-GSYTCDCPIGMY   52 (221)
Q Consensus         6 ~c~~~~~~~~~~c~~~~~-C~~~~~~~c--~~~C~~~~-~~~~C~C~~g~~   52 (221)
                      .|..+|..|...|..++. |+. .+..|  ...|.... ....|.|..+|.
T Consensus        35 rCl~gY~~dg~~Cv~~Np~C~~-nNGGCd~nAeC~~~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           35 RCLLGFKEVGGKCVPASITCEE-NNGGCAPEAECTMDDKKEVECKCTKEGS   84 (105)
T ss_dssp             EECTTEEECSSSEEECCCCTTS-GGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred             EEECCeeccCCEEEECCcchhh-cCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence            578888888888887777 754 34456  77898875 778899998863

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=87.54  E-value=0.32  Score=28.84  Aligned_cols=36  Identities=36%  Similarity=0.715  Sum_probs=23.7

Q ss_pred             cccccCCCCCCC-CCceee--cCCceeeeCCCCccCCCc
Q 036177           21 IDECLDKEKYHC-EGKCKN--TIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        21 ~~~C~~~~~~~c-~~~C~~--~~~~~~C~C~~g~~~~~~   56 (221)
                      .+.|...-..-| +|.|..  ..+.+.|.|+.||.|..+
T Consensus        37 ~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYtG~RC   75 (79)
T 1xdt_R           37 RDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYHGERC   75 (79)
T ss_dssp             --CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEESTTC
T ss_pred             CCCCCccccCcCCCCEeeeecCCCCeEEEcCCCcccccc
Confidence            345654334466 788854  346788999999999863

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=86.61  E-value=0.4  Score=39.97  Aligned_cols=33  Identities=33%  Similarity=1.018  Sum_probs=25.2

Q ss_pred             ccccCCCCCCC--CCceee-cCCceeeeCC-CCccCCCcc
Q 036177           22 DECLDKEKYHC--EGKCKN-TIGSYTCDCP-IGMYGDGKV   57 (221)
Q Consensus        22 ~~C~~~~~~~c--~~~C~~-~~~~~~C~C~-~g~~~~~~~   57 (221)
                      ++|.. .  +|  .|+|.+ ..++|.|.|+ .||.|..+.
T Consensus         2 d~C~s-~--PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce   38 (587)
T 3nt1_A            2 NPCCS-N--PCQNRGECMSTGFDQYKCDCTRTGFYGENCT   38 (587)
T ss_dssp             CTTTT-C--CCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred             CCCCC-C--CCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence            56754 3  56  689996 4589999999 999998754

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=85.27  E-value=0.37  Score=26.69  Aligned_cols=25  Identities=28%  Similarity=0.813  Sum_probs=18.8

Q ss_pred             CCceee----cCCceeeeCCCCccCCCcc
Q 036177           33 EGKCKN----TIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus        33 ~~~C~~----~~~~~~C~C~~g~~~~~~~   57 (221)
                      .|+|..    ..+.+.|.|+.||.|....
T Consensus        19 GGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce   47 (58)
T 3ltf_D           19 DAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (58)
T ss_dssp             SCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred             CCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence            468874    3456889999999988743

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=83.89  E-value=0.33  Score=37.59  Aligned_cols=39  Identities=28%  Similarity=0.608  Sum_probs=27.5

Q ss_pred             cccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-cccc
Q 036177           21 IDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCRG   61 (221)
Q Consensus        21 ~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~~   61 (221)
                      .+.|.. .+..|+..|-..+++++|.||+||. ..+. .|..
T Consensus       304 ~n~C~~-~~g~C~~lCl~~~~~~~C~C~~g~~-~~d~~~C~~  343 (349)
T 3v64_C          304 KNRCGD-NNGGCTHLCLPSGQNYTCACPTGFR-KINSHACAL  343 (349)
T ss_dssp             CCTTTT-GGGGCSSEEECCTTSCEEECCTTEE-EETTTEEEE
T ss_pred             cCcccC-CCCCcccEeecCCCCCeeECCCCCc-CCCCCcccc
Confidence            345643 2335777888888899999999998 5544 6753

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=83.08  E-value=0.89  Score=23.52  Aligned_cols=7  Identities=43%  Similarity=0.396  Sum_probs=2.7

Q ss_pred             HHHHHHH
Q 036177           79 FLLPIGL   85 (221)
Q Consensus        79 ~~~~~~~   85 (221)
                      ++++++.
T Consensus        21 ~~v~ii~   27 (44)
T 2l2t_A           21 FILVIVG   27 (44)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            3343433

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=82.65  E-value=1.5  Score=32.99  Aligned_cols=70  Identities=21%  Similarity=0.245  Sum_probs=44.9

Q ss_pred             cceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCce--eeeeeEEEeCC---eeEEEEEcc
Q 036177          145 SRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNV--VKLLGCCLETE---VPLLVYEFI  218 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~ni--v~l~g~~~~~~---~~~lv~e~~  218 (221)
                      .+.++.|....+|+..    ..+++|.....  .....+.+|..+|+.+ .+..+  .+.++.....+   ..|+|||++
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            3458889999888753    44778775432  3356789999999887 44333  34443332222   358999998


Q ss_pred             cC
Q 036177          219 LN  220 (221)
Q Consensus       219 ~~  220 (221)
                      ++
T Consensus        99 ~G  100 (304)
T 3sg8_A           99 KG  100 (304)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=81.75  E-value=1.4  Score=37.18  Aligned_cols=40  Identities=23%  Similarity=0.480  Sum_probs=29.0

Q ss_pred             cccccCCCCCCCCCceeecC--CceeeeCCCCccCCCcc-cccc
Q 036177           21 IDECLDKEKYHCEGKCKNTI--GSYTCDCPIGMYGDGKV-GCRG   61 (221)
Q Consensus        21 ~~~C~~~~~~~c~~~C~~~~--~~~~C~C~~g~~~~~~~-~c~~   61 (221)
                      .+.|.. .+..|+..|...+  .+++|.||.||...++. .|..
T Consensus       272 ~n~C~~-~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~  314 (619)
T 3s94_A          272 TNPCGI-DNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD  314 (619)
T ss_dssp             CCTTTT-TGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred             cccccC-CCCcccceEECCCCCCCceEeCCchheecccCcccCC
Confidence            456753 3447888898866  47999999999877665 6754

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=81.26  E-value=4.1  Score=30.83  Aligned_cols=70  Identities=16%  Similarity=0.229  Sum_probs=37.7

Q ss_pred             ceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-----CCCceeeee-e--EEEeCCeeEEEEEc
Q 036177          146 RIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-----NHRNVVKLL-G--CCLETEVPLLVYEF  217 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~-g--~~~~~~~~~lv~e~  217 (221)
                      ..|+.|..+.+|+....++ .+++|.... +   ...+..|..++..+     ..|.++.-. |  +....+..++++||
T Consensus        38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~-~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~  112 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR-P---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW  112 (346)
T ss_dssp             EECC----CEEEEEEETTE-EEEEEEECS-C---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred             eeccccccCcEEEEEeCCC-CEEEEecCC-C---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence            3455667889999887444 488888764 1   12333444444433     234444311 1  11235667899999


Q ss_pred             ccC
Q 036177          218 ILN  220 (221)
Q Consensus       218 ~~~  220 (221)
                      +++
T Consensus       113 i~G  115 (346)
T 2q83_A          113 IEG  115 (346)
T ss_dssp             CCC
T ss_pred             ecC
Confidence            975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	221
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-22
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-22
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-21
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-21
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-21
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-21
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-21
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	7e-21
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	8e-21
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-20
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-20
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-20
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-20
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-19
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-19
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-19
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-18
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-18
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-18
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-18
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-18
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-18
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-18
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-18
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-18
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-18
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-18
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-18
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-18
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-17
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-17
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-17
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	7e-17
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-17
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	8e-17
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	8e-17
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-16
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-16
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-16
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-16
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-16
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	8e-16
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-15
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-15
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-15
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-15
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-15
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-14
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-14
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-14
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-14
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-14
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-14
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	8e-14
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	8e-14
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-13
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-13
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	6e-13
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-12
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-12
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	8e-12
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	9e-11
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	4e-10
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	5e-09
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	7e-09
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	1e-08
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	1e-08
d1apqa_	53	g.3.11.1 (A:) Complement protease C1R {Human (Homo	2e-08
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	7e-08
d1nzia2	42	g.3.11.1 (A:118-159) Complement C1S component {Hum	5e-07
d2vj3a1	42	g.3.11.1 (A:411-452) Neurogenic locus notch homolo	7e-07
d1szba2	45	g.3.11.1 (A:124-168) Mannose-binding protein assoc	7e-07
d1i0ua2	41	g.3.11.1 (A:42-82) Low density lipoprotein (LDL) r	1e-06
d1nt0a3	45	g.3.11.1 (A:120-164) Mannose-binding protein assoc	1e-06
d1gl4a2	40	g.3.11.5 (A:359-398) EGF-like domain of nidogen-1	1e-05
d1edmb_	39	g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens	2e-05
d2c4fl1	37	g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrof	2e-05
d3bpse1	40	g.3.11.1 (E:293-332) Low density lipoprotein (LDL)	8e-05
d2vj3a2	39	g.3.11.1 (A:453-491) Neurogenic locus notch homolo	2e-04
d1autl2	50	g.3.11.1 (L:97-146) Activated protein c (autoproth	0.001
d2vj3a3	35	g.3.11.1 (A:492-526) Neurogenic locus notch homolo	0.001
d1kigl_	51	g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bo	0.002
d2p3ua1	51	g.3.11.1 (A:87-137) Factor X, N-terminal module {H	0.002
d1xkba1	39	g.3.11.1 (A:48-86) Factor X, N-terminal module {Hu	0.002

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.3 bits (226), Expect = 1e-22
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 2/89 (2%)

Query: 135 LEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEVVILSQ 192
           +E   D+++    +G G  G VFK      G ++A K     +  +   Q I E+ +L +
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
            N   +V   G         +  E +  G
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGG 89

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 90.1 bits (223), Expect = 6e-22
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
           D+Y +   +G G  G V +      G   A K   + HES+ E    E+  +S + H  +
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
           V L     +    +++YEF+  G
Sbjct: 86  VNLHDAFEDDNEMVMIYEFMSGG 108

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.4 bits (216), Expect = 2e-21
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
           +  K+   +G G  G V+ G       VAVK  K     + + F+ E  ++ Q+ H+ +V
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLV 71

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
           +L     +  +  ++ E++ NG
Sbjct: 72  RLYAVVTQEPI-YIITEYMENG 92

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.4 bits (216), Expect = 2e-21
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
                 + IG G  G V  G   +   VA+K  +     + E FI E  ++ +++H  +V
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLV 63

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
           +L G CLE     LV+EF+ +G
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHG 85

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.1 bits (218), Expect = 2e-21
 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 7/101 (6%)

Query: 125 EKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNV 180
           +  +LF   D EK    +   R IG G  G V+    + +  +VA+K    S        
Sbjct: 3   DVAELFFKDDPEK---LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW 59

Query: 181 EQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           +  I EV  L ++ H N ++  GC L      LV E+ L  
Sbjct: 60  QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS 100

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 2e-21
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
            +    + +G G  G V  G       VA+K  K    S  ++FI E  ++  ++H  +V
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLV 62

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
           +L G C +     ++ E++ NG
Sbjct: 63  QLYGVCTKQRPIFIITEYMANG 84

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.6 bits (214), Expect = 6e-21
 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 3/104 (2%)

Query: 119 SNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHE 177
           S+E  +EK +   S         Y     IGQG  GTV+  M +  G+ VA+++     +
Sbjct: 1   SDEEILEKLRSIVSVG--DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58

Query: 178 SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
              E  INE++++ +  + N+V  L   L  +   +V E++  G
Sbjct: 59  PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG 102

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 87.0 bits (215), Expect = 7e-21
 Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 1/83 (1%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
           D Y +   +G G  G V + +    GR+   K   + +  +     NE+ I++Q++H  +
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88

Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
           + L     +    +L+ EF+  G
Sbjct: 89  INLHDAFEDKYEMVLILEFLSGG 111

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 86.0 bits (212), Expect = 8e-21
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 14/106 (13%)

Query: 130 FTSKDLEKATDN---------YKVSRIIGQGGQGTVFKGMLT----DGRIVAVKK-SKSV 175
           FT +D  +A             K+ ++IG G  G V  G L         VA+K      
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 176 HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
            E     F++E  I+ Q +H NV+ L G   ++   +++ EF+ NG
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENG 112

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.0 bits (212), Expect = 1e-20
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 8/106 (7%)

Query: 124 IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKK-SKSVH 176
           I+ T+L      E   +     + +G G  G V +              VAVK    S H
Sbjct: 7   IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 66

Query: 177 ESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
            +  E  ++E+ +LS + NH N+V LLG C      L++ E+   G
Sbjct: 67  LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG 112

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.5 bits (211), Expect = 1e-20
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEVVILS 191
           +K  +++K  +I+G+G   TV     L   R  A+K   K   + E+ V     E  ++S
Sbjct: 4   KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63

Query: 192 QINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           +++H   VKL     + E       +  NG
Sbjct: 64  RLDHPFFVKLYFTFQDDEKLYFGLSYAKNG 93

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 85.9 bits (212), Expect = 1e-20
 Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEVVIL 190
           K  E   D Y    ++G G    V         ++VA+K  +K   E       NE+ +L
Sbjct: 2   KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 61

Query: 191 SQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
            +I H N+V L           L+ + +  G
Sbjct: 62  HKIKHPNIVALDDIYESGGHLYLIMQLVSGG 92

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.9 bits (207), Expect = 3e-20
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 4/83 (4%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
              K+ + IG+G  G V  G    G  VAVK  K+  ++  + F+ E  +++Q+ H N+V
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLV 63

Query: 200 KLLGCCLETEVPL-LVYEFILNG 221
           +LLG  +E +  L +V E++  G
Sbjct: 64  QLLGVIVEEKGGLYIVTEYMAKG 86

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.7 bits (204), Expect = 1e-19
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
            D +++   +G G  G V+K    +   + A K   +  E  +E ++ E+ IL+  +H N
Sbjct: 11  EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 70

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           +VKLL          ++ EF   G
Sbjct: 71  IVKLLDAFYYENNLWILIEFCAGG 94

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 1e-19
 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%)

Query: 133 KDLEKATDNYKVSRI-IGQGGQGTVFKGML---TDGRIVAVKK-SKSVHESNVEQFINEV 187
           K L    DN  ++ I +G G  G+V +G+         VA+K   +   +++ E+ + E 
Sbjct: 1   KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 60

Query: 188 VILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
            I+ Q+++  +V+L+G C + E  +LV E    G
Sbjct: 61  QIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 93

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 81.3 bits (200), Expect = 4e-19
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 2/89 (2%)

Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQ 192
             E    +  +   +G G  G V++G+       VAVK  K      VE+F+ E  ++ +
Sbjct: 11  KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKE 69

Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
           I H N+V+LLG C       ++ EF+  G
Sbjct: 70  IKHPNLVQLLGVCTREPPFYIITEFMTYG 98

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.0 bits (197), Expect = 1e-18
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI 193
           D E       V + IG G  GTV+KG       V +    +     ++ F NEV +L + 
Sbjct: 2   DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61

Query: 194 NHRNVVKLLGCCLETEVPLLVYEFILNG 221
            H N++  +G     ++  +V ++    
Sbjct: 62  RHVNILLFMGYSTAPQL-AIVTQWCEGS 88

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.1 bits (197), Expect = 1e-18
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
           ++ ++   +GQG  G V+ G       VA+K  K     + E F+ E  ++ ++ H  +V
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 75

Query: 200 KLLGCCLETEVPLLVYEFILNG 221
           +L     E  +  +V E++  G
Sbjct: 76  QLYAVVSEEPI-YIVTEYMSKG 96

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 79.8 bits (196), Expect = 1e-18
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 8/91 (8%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEVVILSQIN 194
           +D Y++  I+G GG   V     L   R VAVK      +   S   +F  E    + +N
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 195 HRNVVKLLGCCLETE----VPLLVYEFILNG 221
           H  +V +            +P +V E++   
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGV 96

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.3 bits (195), Expect = 2e-18
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEVVILSQINHRN 197
           +++ + + +G+G  G V   +       VAVK           E    E+ I   +NH N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
           VVK  G   E  +  L  E+   G
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGG 88

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 79.5 bits (195), Expect = 2e-18
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%)

Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKK-SKSVHESNVEQFIN 185
             LE   +N +  R IG+G  G VF+             +VAVK   +         F  
Sbjct: 6   LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQR 65

Query: 186 EVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           E  ++++ ++ N+VKLLG C   +   L++E++  G
Sbjct: 66  EAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYG 101

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.8 bits (196), Expect = 2e-18
 Identities = 25/119 (21%), Positives = 51/119 (42%), Gaps = 12/119 (10%)

Query: 115 QELSSNEGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD------G 164
            +++ +  N    ++  +       E   +N +  +++G G  G V              
Sbjct: 8   VQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVS 67

Query: 165 RIVAVKK-SKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
             VAVK   +    S  E  ++E+ +++Q+ +H N+V LLG C  +    L++E+   G
Sbjct: 68  IQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYG 126

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (193), Expect = 3e-18
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTD----GRIVAVKK-SKSVHESNVEQFINEVV 188
           D E   +  ++ R IG+G  G V +G+          VA+K       +S  E+F+ E +
Sbjct: 1   DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60

Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
            + Q +H ++VKL+G   E  V  ++ E    G
Sbjct: 61  TMRQFDHPHIVKLIGVITENPV-WIIMELCTLG 92

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (195), Expect = 3e-18
 Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK-SKSVHESNVEQFINEVVILSQINHR 196
              Y     IG+G  G V       +   VA+KK S   H++  ++ + E+ IL +  H 
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 197 NVVKLLGCCLETEVPLLVYEFILN 220
           N++ +        +  +   +++ 
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVT 90

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.5 bits (193), Expect = 3e-18
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 5/87 (5%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINHR 196
           ++Y+V   IG G  G   K    +DG+I+  K     S+ E+  +  ++EV +L ++ H 
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 197 NVVKLLGCCLETE--VPLLVYEFILNG 221
           N+V+     ++       +V E+   G
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGG 90

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 79.0 bits (194), Expect = 3e-18
 Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
            ++++ R +G G  G V       +GR  A+K   K   V    VE   +E ++LS + H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 196 RNVVKLLGCCLETEVPLLVYEFILN 220
             ++++ G   + +   ++ ++I  
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEG 88

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (193), Expect = 5e-18
 Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 7/105 (6%)

Query: 124 IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKK-SKSVH 176
                ++   + E A +   +SR +GQG  G V++G+            VA+K  +++  
Sbjct: 4   FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 63

Query: 177 ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
                +F+NE  ++ + N  +VV+LLG   + +  L++ E +  G
Sbjct: 64  MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 108

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.7 bits (191), Expect = 6e-18
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
           +++++ R +G+G  G V+         I+A+K   K++        Q   EV I S + H
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 196 RNVVKLLGCCLETEVPLLVYEFILNG 221
            N+++L G   +     L+ E+   G
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLG 91

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 6e-18
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 6/83 (7%)

Query: 145 SRIIGQGGQGTVFKGMLTD----GRIVAVKK-SKSVHESNVEQFINEVVILSQINHRNVV 199
           + +IG+G  G V+ G L D        AVK  ++      V QF+ E +I+   +H NV+
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91

Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
            LLG CL +E  PL+V  ++ +G
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHG 114

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 76.8 bits (188), Expect = 2e-17
 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKK--SKSVHESNVEQFINEVVILSQINHRN 197
           + Y     IG+G  G V+K     G   A+KK   +   E      I E+ IL ++ H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 198 VVKLLGCCLETEVPLLVYEFI 218
           +VKL       +  +LV+E +
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHL 82

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 3e-17
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLT----DGRIVAVK---KSKSVHESNVEQFINEVVILSQ 192
            + ++   +G G  G V +G           VAVK            ++ FI EV  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
           ++HRN+++L G  L   +  +V E    G
Sbjct: 68  LDHRNLIRLYGVVLTPPM-KMVTELAPLG 95

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 4e-17
 Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
           + Y ++  +G+G  G V + +  +  +    K  K V  ++      E+ IL+   HRN+
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK-VKGTDQVLVKKEISILNIARHRNI 63

Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
           + L       E  ++++EFI   
Sbjct: 64  LHLHESFESMEELVMIFEFISGL 86

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 7e-17
 Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 146 RIIGQGGQGTVFKGMLTD---GRIVAVK--KSKSVHESNVEQFINEVVILSQINHRNVVK 200
           + +G G  GTV KG        + VAVK  K+++   +  ++ + E  ++ Q+++  +V+
Sbjct: 13  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72

Query: 201 LLGCCLETEVPLLVYEFILNG 221
           ++G C E E  +LV E    G
Sbjct: 73  MIGIC-EAESWMLVMEMAELG 92

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 75.9 bits (186), Expect = 7e-17
 Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK---KSKSVHESNVEQFINEVV---ILSQ 192
           +++ V RIIG+GG G V+     D G++ A+K   K +   +      +NE +   ++S 
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
            +   +V +       +    + + +  G
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGG 92

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 8e-17
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 6/92 (6%)

Query: 136 EKATDNYKVSRIIGQGGQGTVFKGMLTDG-----RIVAVKK-SKSVHESNVEQFINEVVI 189
           E         ++IG G  G V+KGML          VA+K       E     F+ E  I
Sbjct: 3   EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62

Query: 190 LSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           + Q +H N+++L G   + +  +++ E++ NG
Sbjct: 63  MGQFSHHNIIRLEGVISKYKPMMIITEYMENG 94

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.2 bits (184), Expect = 8e-17
 Identities = 24/100 (24%), Positives = 37/100 (37%), Gaps = 10/100 (10%)

Query: 129 LFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK------SKSVHESNVE 181
           +F  ++++   D Y     +G G    V K    + G   A K         S    + E
Sbjct: 2   VFRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 58

Query: 182 QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
               EV IL +I H NV+ L          +L+ E +  G
Sbjct: 59  DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 98

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 1e-16
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 7/97 (7%)

Query: 130 FTSKDLEKAT----DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK--KSKSVHESNVEQ 182
           F  +++ K        Y+  + +G G  G V   +    G  VA+K        E   ++
Sbjct: 4   FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR 63

Query: 183 FINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL 219
              E+ +L  + H NV+ LL      E      +F L
Sbjct: 64  AYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYL 100

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 2e-16
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 3/82 (3%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINHR 196
           +N++    IG+G  G V+K      G +VA+K  +  +  E      I E+ +L ++NH 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61

Query: 197 NVVKLLGCCLETEVPLLVYEFI 218
           N+VKLL          LV+EF+
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL 83

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (181), Expect = 3e-16
 Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVK---KSKSVHESNVEQFINEVVILS-QIN 194
           +++ + +++G+G  G VF        +  A+K   K   + + +VE  + E  +LS    
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 195 HRNVVKLLGCCLETEVPLLVYEFILNG 221
           H  +  +       E    V E++  G
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGG 88

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.7 bits (178), Expect = 4e-16
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 7/87 (8%)

Query: 142 YKVSRIIGQGGQGTVFKGMLTD-GRIVAVKK--SKSVHESNVEQFINEVVILSQINHRNV 198
            K    IG+G   TV+KG+ T+    VA  +   + + +S  ++F  E  +L  + H N+
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70

Query: 199 VKLLGCCLET----EVPLLVYEFILNG 221
           V+       T    +  +LV E + +G
Sbjct: 71  VRFYDSWESTVKGKKCIVLVTELMTSG 97

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 6e-16
 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 7/97 (7%)

Query: 130 FTSKDLEKA----TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHES--NVEQ 182
           F  ++L K      + Y+    +G G  G+V        G  VAVKK     +S  + ++
Sbjct: 4   FYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR 63

Query: 183 FINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL 219
              E+ +L  + H NV+ LL             +  L
Sbjct: 64  TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 100

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (177), Expect = 8e-16
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDG---RIVAVKK-SKSVHESNVEQFINEVVILSQI-N 194
           ++ K   +IG+G  G V K  +         A+K+  +   + +   F  E+ +L ++ +
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 195 HRNVVKLLGCCLETEVPLLVYEFILNG 221
           H N++ LLG C       L  E+  +G
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHG 96

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 1e-15
 Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 7/91 (7%)

Query: 137 KATDNYKVSRIIGQGGQGTVFKGMLTD-----GRIVAVKK-SKSVHESNVEQFINEVVIL 190
           K T+ +K  +++G G  GTV+KG+           VA+K+  ++      ++ ++E  ++
Sbjct: 7   KETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65

Query: 191 SQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
           + +++ +V +LLG CL + V L+        
Sbjct: 66  ASVDNPHVCRLLGICLTSTVQLITQLMPFGC 96

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 2e-15
 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 11/89 (12%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
            +Y  +++IG G  G V++  L D G +VA+KK       +      E+ I+ +++H N+
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNI 75

Query: 199 VKLLGCCLETEVP------LLVYEFILNG 221
           V+L      +          LV +++   
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPET 104

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 3e-15
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 4/86 (4%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
           +++   +++G+G  G V        GR  A+K   K   + +  V   + E  +L    H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 196 RNVVKLLGCCLETEVPLLVYEFILNG 221
             +  L       +    V E+   G
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGG 90

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (171), Expect = 5e-15
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 10/92 (10%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLT--------DGRIVAVKK-SKSVHESNVEQFINEVVIL 190
           D   + + +G+G  G V                  VAVK       E ++   I+E+ ++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 191 SQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
             I  H+N++ LLG C +     ++ E+   G
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKG 104

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 7e-15
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 146 RIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESN-----VEQFINEVVILSQINHRNVV 199
             +G+G   TV+K       +IVA+KK K  H S          + E+ +L +++H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 200 KLLGCCLETEVPLLVYEFI 218
            LL          LV++F+
Sbjct: 64  GLLDAFGHKSNISLVFDFM 82

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.0 bits (168), Expect = 1e-14
 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 9/91 (9%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK------SKSVHESNVEQFINEVVILSQ 192
             Y+V  ++G GG G+V+ G+ ++D   VA+K       S      N  +   EVV+L +
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63

Query: 193 IN--HRNVVKLLGCCLETEVPLLVYEFILNG 221
           ++     V++LL      +  +L+ E     
Sbjct: 64  VSSGFSGVIRLLDWFERPDSFVLILERPEPV 94

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.4 bits (169), Expect = 1e-14
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 4/86 (4%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
           D +   + +G G  G V        G   A+K   K K V    +E  +NE  IL  +N 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 196 RNVVKLLGCCLETEVPLLVYEFILNG 221
             +VKL     +     +V E++  G
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGG 126

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 1e-14
 Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 6/86 (6%)

Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
               +   IG+G  G V++G    G  VAVK   S  E        E+     + H N++
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS-REERSWFREAEIYQTVMLRHENIL 60

Query: 200 KLLGCCLETE----VPLLVYEFILNG 221
             +    +         LV ++  +G
Sbjct: 61  GFIAADNKDNGTWTQLWLVSDYHEHG 86

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (166), Expect = 2e-14
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINHR 196
             Y+    IG+G  GTVFK        IVA+K  +     E      + E+ +L ++ H+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 197 NVVKLLGCCLETEVPLLVYEF 217
           N+V+L       +   LV+EF
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEF 82

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (165), Expect = 4e-14
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK--SKSVHESNVEQFINEVVILSQINHR 196
             Y+    IGQG  G VFK      G+ VA+KK   ++  E      + E+ IL  + H 
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 197 NVVKLLGCCLETEVPLLVYEFIL 219
           NVV L+  C     P    +  +
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSI 92

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 67.4 bits (164), Expect = 4e-14
 Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 11/93 (11%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK---------SKSVHESNVEQFINEVVI 189
           +NY+   I+G+G    V + +     +  AVK          S    +   E  + EV I
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 190 LSQIN-HRNVVKLLGCCLETEVPLLVYEFILNG 221
           L +++ H N+++L           LV++ +  G
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG 95

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 8e-14
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 137 KATDNYKVSRIIGQGGQGTVFKG--MLTDGRIVAVK--KSKSVHESNVEQFINEVVILSQ 192
           +A   Y+    IG+G  G VFK   +   GR VA+K  + ++  E      I EV +L  
Sbjct: 4   RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 63

Query: 193 I---NHRNVVKLLGCCLETEVPLLVYEFILN 220
           +    H NVV+L   C  +         ++ 
Sbjct: 64  LETFEHPNVVRLFDVCTVSRTDRETKLTLVF 94

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.8 bits (162), Expect = 8e-14
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
           + Y++ R IG G  G ++ G  +  G  VA+K      ++   Q   E  I   +     
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECV--KTKHPQLHIESKIYKMMQGGVG 64

Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
           +  +  C       ++   +L  
Sbjct: 65  IPTIRWCGAEGDYNVMVMELLGP 87

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 66.4 bits (161), Expect = 1e-13
 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 7/86 (8%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-HRN 197
           D+Y++ R +G+G    VF+ + +T+   V VK    +     ++   E+ IL  +    N
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKI---LKPVKKKKIKREIKILENLRGGPN 91

Query: 198 VVKLLGCCLE--TEVPLLVYEFILNG 221
           ++ L     +  +  P LV+E + N 
Sbjct: 92  IITLADIVKDPVSRTPALVFEHVNNT 117

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (158), Expect = 3e-13
 Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 8/90 (8%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKK--SKSVHESNVEQFINEVVILSQINHR 196
             Y+  + IG G QG V         R VA+KK      ++++ ++   E+V++  +NH+
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76

Query: 197 NVVKLLGCC-----LETEVPLLVYEFILNG 221
           N++ LL        LE    + +   +++ 
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDA 106

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 6e-13
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 8/90 (8%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM------LTDGRIVAVKK-SKSVHESNVEQFINEVVILSQ 192
           D  K+ + +G+G  G V +            R VAVK   +    S     ++E+ IL  
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 193 INHR-NVVKLLGCCLETEVPLLVYEFILNG 221
           I H  NVV LLG C +   PL+V       
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKF 102

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 4e-12
 Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 21/122 (17%)

Query: 111 LLLRQELSSNE--GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLT----DG 164
           L ++ EL +    G+ EK  +          +N+++ +++G G  G VF          G
Sbjct: 3   LTVKHELRTANLTGHAEKVGI----------ENFELLKVLGTGAYGKVFLVRKISGHDTG 52

Query: 165 RIVAVKKSKSVH----ESNVEQFINEVVILSQINHR-NVVKLLGCCLETEVPLLVYEFIL 219
           ++ A+K  K           E    E  +L  I     +V L           L+ ++I 
Sbjct: 53  KLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYIN 112

Query: 220 NG 221
            G
Sbjct: 113 GG 114

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 61.7 bits (149), Expect = 4e-12
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN- 197
            +YKV R IG+G  G +F+G  L + + VA+K       S+  Q  +E      +     
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEP--RRSDAPQLRDEYRTYKLLAGCTG 62

Query: 198 VVKLLGCCLETEVPLLVYEFI 218
           +  +     E    +LV + +
Sbjct: 63  IPNVYYFGQEGLHNVLVIDLL 83

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 5e-12
 Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 12/89 (13%)

Query: 140 DNYKV-SRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHR 196
           D+YKV S+++G G  G V +          A+K  +     +  +   EV +  +     
Sbjct: 11  DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-----DCPKARREVELHWRASQCP 65

Query: 197 NVVKLLGCC----LETEVPLLVYEFILNG 221
           ++V+++          +  L+V E +  G
Sbjct: 66  HIVRIVDVYENLYAGRKCLLIVMECLDGG 94

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.2 bits (147), Expect = 8e-12
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVK 200
           Y + R +G G   TV+    + +   VA+K  +   +   E   +E+ +L ++N  +  K
Sbjct: 15  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-DKVYTEAAEDEIKLLQRVNDADNTK 73

Query: 201 LLGCCLETEVPLLVY 215
                    + LL +
Sbjct: 74  EDSMGANHILKLLDH 88

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (128), Expect = 9e-11
 Identities = 14/40 (35%), Positives = 17/40 (42%)

Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVG 58
          TDIDEC         G+C NT G + C C  G      + 
Sbjct: 1  TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMM 40

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (123), Expect = 4e-10
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGK 56
           D+DEC +       G+C NT GSY C+CP G    G 
Sbjct: 3  VDMDECKE-PDVCKHGQCINTDGSYRCECPFGYILAGN 39

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (115), Expect = 5e-09
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVG 58
          DIDEC +     C G C N  G++ C C       G++G
Sbjct: 1  DIDECENGG--FCSGVCHNLPGTFECICGPDSALAGQIG 37

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (114), Expect = 7e-09
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDG 55
          TD++ECLD       G C NT GSY CDCP     + 
Sbjct: 1  TDVNECLD-PTTCISGNCVNTPGSYICDCPPDFELNP 36

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (113), Expect = 1e-08
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMY--GDGK 56
          DIDEC +       GKC NT GS+ C CP G Y   D +
Sbjct: 2  DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTR 40

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (112), Expect = 1e-08
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDG 55
          DIDEC         G C NT GSY C+CP G     
Sbjct: 1  DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSP 36

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (111), Expect = 2e-08
 Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 9/48 (18%)

Query: 18 ATDIDECL-------DKEKYHCEGKCKNTIGSYTCDCPIG--MYGDGK 56
          A D+DEC        +  +  C+  C N +G Y C C  G  +  D  
Sbjct: 1  AVDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRH 48

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 48.6 bits (115), Expect = 7e-08
 Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 10/74 (13%)

Query: 142 YKVSRIIGQGGQGTVFKGMLTDGRIVAVK----------KSKSVHESNVEQFINEVVILS 191
             + +++G+G +  VF           VK          K K   +     F    +  +
Sbjct: 2   DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSA 61

Query: 192 QINHRNVVKLLGCC 205
           +   R + KL G  
Sbjct: 62  RNEFRALQKLQGLA 75

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (101), Expect = 5e-07
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 3/41 (7%)

Query: 22 DECLDKEKYHCEGKCKNTIGSYTCDCPIGMY--GDGKVGCR 60
          +EC D     C   C N IG Y C CP   +   D K  C 
Sbjct: 1  NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMK-NCG 40

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (100), Expect = 7e-07
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 20 DIDECLDKEKY-HCEGKCKNTIGSYTCDCPIGMYGD 54
          D+DEC          GKC NT+GS+ C C  G  G 
Sbjct: 2  DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP 37

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (100), Expect = 7e-07
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 4/40 (10%)

Query: 21 IDECLDK--EKYHCEGKCKNTIGSYTCDCPIGMY--GDGK 56
          IDEC     E   C+  C N +G + C C  G     + +
Sbjct: 1  IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKR 40

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 41

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (99), Expect = 1e-06
 Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 4/38 (10%)

Query: 21 IDECLDKEKYHCEGKCKNTIGSYTCDCPIGMY--GDGK 56
          IDEC D +   C   C N  G Y C C  G       K
Sbjct: 1  IDECQDPD--TCSQLCVNLEGGYKCQCEEGFQLDPHTK 36

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 45

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.8 bits (98), Expect = 1e-06
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 5/45 (11%)

Query: 21 IDECLDK--EKYHCEGKCKNTIGSYTCDCPIG--MYGDGKVGCRG 61
          +DEC     +   C+  C N +G Y C C +G  ++ +    C  
Sbjct: 1  VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKH-TCSA 44

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.1 bits (91), Expect = 1e-05
 Identities = 7/40 (17%), Positives = 15/40 (37%), Gaps = 6/40 (15%)

Query: 18 ATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV 57
          A +  +C          +C++    + C C     G+G+ 
Sbjct: 3  ANNRHQC------SVHAECRDYATGFCCRCVANYTGNGRQ 36

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 2e-05
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
          D D+C      +  G CK+ I SY C CP G  G 
Sbjct: 2  DGDQCESNPCLN-GGSCKDDINSYECWCPFGFEGK 35

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} Length = 37

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 38.1 bits (89), Expect = 2e-05
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
          D D+C      +  G CK+ + SY C C     G 
Sbjct: 1  DGDQCASSPCQN-GGSCKDQLQSYICFCLPAFEGR 34

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 8e-05
 Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 2/36 (5%)

Query: 22 DECLDKEKYHCEGKCKNTIGSYTCDCPIGMY-GDGK 56
          +ECLD     C   C +    Y C CP G      +
Sbjct: 3  NECLD-NNGGCSHVCNDLKIGYECLCPDGFQLVAQR 37

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 2e-04
 Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 21 IDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
          ++EC+     + +  C + IG + C C  G  G 
Sbjct: 1  VNECVSNPCQN-DATCLDQIGEFQCICMPGYEGV 33

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} Length = 50

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (77), Expect = 0.001
 Identities = 7/27 (25%), Positives = 8/27 (29%), Gaps = 2/27 (7%)

Query: 32 CEGKCKNTIGSYTCDCPIGMY--GDGK 56
          C   C   +G   C C  G     D  
Sbjct: 9  CTHYCLEEVGWRRCSCAPGYKLGDDLL 35

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} Length = 35

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.001
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 22 DECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
          DEC      H  G+C + I  + C+CP G  G 
Sbjct: 1  DECASSPCLH-NGRCLDKINEFQCECPTGFTGH 32

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 33.3 bits (76), Expect = 0.002
 Identities = 7/27 (25%), Positives = 9/27 (33%), Gaps = 2/27 (7%)

Query: 32 CEGKCKNTIGSYTCDCPIGMY--GDGK 56
          C+  C+       C C  G     D K
Sbjct: 8  CDQFCREERSEVRCSCAHGYVLGDDSK 34

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 51

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 8/27 (29%), Positives = 10/27 (37%), Gaps = 2/27 (7%)

Query: 32 CEGKCKNTIGSYTCDCPIGMY--GDGK 56
          C+  C     S  C C  G     +GK
Sbjct: 10 CDQFCHEEQNSVVCSCARGYTLADNGK 36

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.002
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 22 DECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
          D+C      + +GKCK+ +G YTC C  G  G 
Sbjct: 1  DQCETSPCQN-QGKCKDGLGEYTCTCLEGFEGK 32

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	221
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.78
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.76
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.75
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.75
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.74
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.73
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.73
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.73
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.72
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.71
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.7
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.69
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.69
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.69
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.69
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.69
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.68
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.68
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.68
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.68
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.68
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.67
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.67
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.67
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.67
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.65
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.65
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.64
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.64
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.64
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.64
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.63
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.63
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.61
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.61
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.6
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.6
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.6
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.59
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.58
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.58
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.57
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.56
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.55
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.54
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.53
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.51
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.5
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.48
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.46
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.45
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.44
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.44
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.43
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.41
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.39
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.36
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.36
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.35
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.23
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.23
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.84
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.84
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.74
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.72
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.68
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.67
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.63
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	98.54
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.48
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	98.4
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	98.39
d1szba2	45	Mannose-binding protein associated serine protease	98.32
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.3
d1nt0a3	45	Mannose-binding protein associated serine protease	98.27
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	98.01
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.95
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	97.74
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	97.74
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	97.49
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.39
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	97.14
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	97.12
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	97.07
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.05
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	97.03
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	96.98
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	96.84
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	96.52
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	96.42
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	95.94
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	95.51
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	95.47
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	95.45
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	95.18
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	95.03
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	94.81
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	94.27
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	93.87
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	93.63
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	93.36
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	90.69
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	89.37
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	86.31
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	86.31
d1ccva_	56	Chymotrypsin inhibitor AMCI {Honeybee (Apis mellif	83.27
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	82.47

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=4e-19  Score=133.41  Aligned_cols=88  Identities=25%  Similarity=0.425  Sum_probs=77.6

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      .++|+++.++|.+.+.||+|+||.||+|.++++..||||.++... ...+.|.+|+.+|++++|||||+++|++. .+..
T Consensus         5 ~~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~   82 (272)
T d1qpca_           5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPI   82 (272)
T ss_dssp             TCTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred             CCCeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCe
Confidence            467889999999999999999999999999888899999987533 34578999999999999999999999875 4567


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus        83 ~iv~Ey~~~g   92 (272)
T d1qpca_          83 YIITEYMENG   92 (272)
T ss_dssp             EEEEECCTTC
T ss_pred             EEEEEeCCCC
Confidence            9999999987

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=3.3e-19  Score=134.85  Aligned_cols=89  Identities=29%  Similarity=0.504  Sum_probs=79.2

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEeC-CCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~-~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      +++|++..++|.+.+.||+|+||.||+|.+. .++.||||.++... ...++|++|+.+|++++|||||+++|++...+.
T Consensus         9 ~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   87 (287)
T d1opja_           9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP   87 (287)
T ss_dssp             CCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             CcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCe
Confidence            4568888899999999999999999999964 58889999987533 346789999999999999999999999999999


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+|+|||+++|
T Consensus        88 ~~iv~E~~~~g   98 (287)
T d1opja_          88 FYIITEFMTYG   98 (287)
T ss_dssp             CEEEEECCTTC
T ss_pred             eEEEeecccCc
Confidence            99999999987

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.3e-18  Score=129.57  Aligned_cols=82  Identities=24%  Similarity=0.436  Sum_probs=73.7

Q ss_pred             ccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      .++|++.+.||+|+||.||+|.++++..||||.++.... ..++|++|+.+|++++||||++++|++...+..++||||+
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            357888999999999999999998888999999876433 4578999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        82 ~~g   84 (258)
T d1k2pa_          82 ANG   84 (258)
T ss_dssp             TTE
T ss_pred             CCC
Confidence            876

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.4e-18  Score=129.91  Aligned_cols=82  Identities=30%  Similarity=0.507  Sum_probs=73.7

Q ss_pred             ccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      .++|++.+.||+|+||.||+|.+.++..||||.++... ...++|.+|+.+|++++|||||+++|++...+..++||||+
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~   82 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   82 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence            45688899999999999999998888899999987633 34578999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        83 ~~g   85 (263)
T d1sm2a_          83 EHG   85 (263)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            987

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.3e-18  Score=129.92  Aligned_cols=89  Identities=24%  Similarity=0.395  Sum_probs=78.1

Q ss_pred             chhhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       131 ~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ..++|+++.++|++.+.||+|+||+||+|.++++..||||.++... ...+.|.+|+.+|++++|||||+++|++. .++
T Consensus         8 ~~~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~   85 (285)
T d1fmka3           8 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEP   85 (285)
T ss_dssp             STTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred             CCcceEcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCC
Confidence            4467888889999999999999999999999888889999987533 34578999999999999999999999874 566


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .++||||+++|
T Consensus        86 ~~lv~Ey~~~g   96 (285)
T d1fmka3          86 IYIVTEYMSKG   96 (285)
T ss_dssp             CEEEECCCTTC
T ss_pred             eEEEEEecCCC
Confidence            89999999987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.2e-18  Score=131.60  Aligned_cols=95  Identities=26%  Similarity=0.496  Sum_probs=81.2

Q ss_pred             eeeechhhhhhhccCccccceecccCceEEEEEEeC------CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCcee
Q 036177          127 TKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVV  199 (221)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv  199 (221)
                      ...+..++|+++.++|.+.+.||+|+||.||+|.+.      .+..||||+++. ........|++|+.+|++++||||+
T Consensus         7 ~~~~~~~~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv   86 (308)
T d1p4oa_           7 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV   86 (308)
T ss_dssp             CSCCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBC
T ss_pred             ccCcCccceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEe
Confidence            344555679999999999999999999999999852      256899999875 3444456799999999999999999


Q ss_pred             eeeeEEEeCCeeEEEEEcccCC
Q 036177          200 KLLGCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       200 ~l~g~~~~~~~~~lv~e~~~~G  221 (221)
                      +++|++...+..++||||+++|
T Consensus        87 ~~~~~~~~~~~~~lv~e~~~~g  108 (308)
T d1p4oa_          87 RLLGVVSQGQPTLVIMELMTRG  108 (308)
T ss_dssp             CEEEEECSSSSCEEEEECCTTC
T ss_pred             eeeeEEecCCceeEEEeecCCC
Confidence            9999999999999999999987

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.7e-18  Score=129.05  Aligned_cols=86  Identities=28%  Similarity=0.377  Sum_probs=74.1

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCe
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV  210 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~  210 (221)
                      ++|+++.++|.+.+.||+|+||.||+|.+.  ..||||.++.  .+....+.|.+|+.+|++++|||||+++|++.. +.
T Consensus         1 ddwei~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~   77 (276)
T d1uwha_           1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQ   77 (276)
T ss_dssp             CCCBCCTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS
T ss_pred             CCcccccccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cE
Confidence            467888999999999999999999999864  3599999864  345567889999999999999999999998754 56


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+|||||+++|
T Consensus        78 ~~lv~Ey~~~g   88 (276)
T d1uwha_          78 LAIVTQWCEGS   88 (276)
T ss_dssp             CEEEEECCCEE
T ss_pred             EEEEEecCCCC
Confidence            79999999876

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.8e-18  Score=127.93  Aligned_cols=83  Identities=27%  Similarity=0.430  Sum_probs=74.7

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      .+.|++.+.||+|+||.||++.. .++..||+|.++.......+.|.+|+.+|++++|||||++++++...+..+|||||
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            34578889999999999999995 46889999998776666778899999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        91 ~~~g   94 (288)
T d2jfla1          91 CAGG   94 (288)
T ss_dssp             CTTE
T ss_pred             CCCC
Confidence            9886

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=9.3e-18  Score=126.58  Aligned_cols=84  Identities=30%  Similarity=0.506  Sum_probs=69.5

Q ss_pred             hhccCccccce-ecccCceEEEEEEeC---CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          137 KATDNYKVSRI-IGQGGQGTVFKGMLT---DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       137 ~~~~~~~~~~~-lg~G~fg~v~~~~~~---~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      ..++++.+.+. ||+|+||.||+|.+.   ++..||||.++. ......++|++|+.+|++++|||||+++|++. .+..
T Consensus         5 l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-~~~~   83 (285)
T d1u59a_           5 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEAL   83 (285)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSE
T ss_pred             ecccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec-cCeE
Confidence            44566777774 999999999999753   345799999875 44455678999999999999999999999885 4568


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      +|||||+++|
T Consensus        84 ~lvmE~~~~g   93 (285)
T d1u59a_          84 MLVMEMAGGG   93 (285)
T ss_dssp             EEEEECCTTE
T ss_pred             EEEEEeCCCC
Confidence            9999999986

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.5e-17  Score=125.82  Aligned_cols=83  Identities=28%  Similarity=0.483  Sum_probs=74.2

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      .++|.+.+.||+|+||.||++.. .+|..||+|.++.......+.+.+|+.+|++++|||||++++++...+..+|||||
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            35688899999999999999984 56899999998765555567899999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        99 ~~gg  102 (293)
T d1yhwa1          99 LAGG  102 (293)
T ss_dssp             CTTC
T ss_pred             cCCC
Confidence            9987

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.70  E-value=1.1e-17  Score=127.21  Aligned_cols=85  Identities=33%  Similarity=0.520  Sum_probs=71.9

Q ss_pred             hhccCccccceecccCceEEEEEEeCC-C---cEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGMLTD-G---RIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~~~-~---~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      ...++|.+.+.||+|+||+||+|.... +   ..||||.+.. ......+.|.+|+.+|++++|||||+++|++...+..
T Consensus        23 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  102 (299)
T d1jpaa_          23 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV  102 (299)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence            344667888999999999999998632 2   3589998865 4555567899999999999999999999999999999


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus       103 ~iv~Ey~~~g  112 (299)
T d1jpaa_         103 MIITEFMENG  112 (299)
T ss_dssp             EEEEECCTTE
T ss_pred             EEEEEecCCC
Confidence            9999999986

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.5e-17  Score=123.97  Aligned_cols=84  Identities=31%  Similarity=0.487  Sum_probs=71.6

Q ss_pred             hhhhccCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC-CeeEE
Q 036177          135 LEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLET-EVPLL  213 (221)
Q Consensus       135 ~~~~~~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-~~~~l  213 (221)
                      |++..++|++.+.||+|+||.||+|.+ .|..||||.++..  ...++|.+|+++|++++||||++++|++... +..+|
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~l   78 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI   78 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEE
Confidence            566777888899999999999999998 6789999999642  3457799999999999999999999998654 56899


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ||||+++|
T Consensus        79 v~ey~~~g   86 (262)
T d1byga_          79 VTEYMAKG   86 (262)
T ss_dssp             EECCCTTE
T ss_pred             EEeccCCC
Confidence            99999986

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.69  E-value=3e-17  Score=124.86  Aligned_cols=90  Identities=30%  Similarity=0.462  Sum_probs=78.4

Q ss_pred             hhhhhhhccCccccceecccCceEEEEEEeC------CCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeE
Q 036177          132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGC  204 (221)
Q Consensus       132 ~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~  204 (221)
                      +.+|+.++++|.+.+.||+|+||.||+|.+.      ++..||||+++. ......+.|.+|+.+|++++||||++++++
T Consensus         5 ~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~   84 (301)
T d1lufa_           5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV   84 (301)
T ss_dssp             HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             hhhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence            3467889999999999999999999999863      346899999875 333446779999999999999999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +...+..+++|||+++|
T Consensus        85 ~~~~~~~~~v~e~~~~g  101 (301)
T d1lufa_          85 CAVGKPMCLLFEYMAYG  101 (301)
T ss_dssp             ECSSSSCEEEEECCTTC
T ss_pred             eccCCceEEEEEecCCC
Confidence            99999999999999876

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.8e-17  Score=123.36  Aligned_cols=87  Identities=29%  Similarity=0.500  Sum_probs=73.6

Q ss_pred             hhhhhccCccccceecccCceEEEEEEeCC----CcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC
Q 036177          134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTD----GRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET  208 (221)
Q Consensus       134 ~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~----~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~  208 (221)
                      +|++++++|.+.+.||+|+||.||+|.+..    +..||+|.++. ......+.|.+|+.+|++++|||||+++|++. .
T Consensus         1 ~~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~   79 (273)
T d1mp8a_           1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E   79 (273)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-S
T ss_pred             CCCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence            467888899999999999999999998632    34689998865 34445678999999999999999999999885 4


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      +..++||||+++|
T Consensus        80 ~~~~iv~E~~~~g   92 (273)
T d1mp8a_          80 NPVWIIMELCTLG   92 (273)
T ss_dssp             SSCEEEEECCTTE
T ss_pred             CeEEEEEEeccCC
Confidence            6789999999876

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.3e-17  Score=128.07  Aligned_cols=85  Identities=22%  Similarity=0.316  Sum_probs=74.5

Q ss_pred             hhccCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          137 KATDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       137 ~~~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      +..++|++.+.||+|+||.||++.. .++..||+|.++. ........+.+|+.+|++++|||||++++++...+..+||
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV   82 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   82 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            3456788899999999999999995 5688999999865 3444467899999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        83 mEy~~gg   89 (322)
T d1s9ja_          83 MEHMDGG   89 (322)
T ss_dssp             EECCTTE
T ss_pred             EEcCCCC
Confidence            9999876

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.8e-17  Score=123.02  Aligned_cols=82  Identities=27%  Similarity=0.388  Sum_probs=69.0

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC-CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV-HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|++.+.||+|+||.||++.. .+++.||+|.++.. .....+.|.+|+.+|++++|||||++++++...+..+|||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            4678889999999999999985 56899999998642 333456799999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        85 ~~gg   88 (271)
T d1nvra_          85 CSGG   88 (271)
T ss_dssp             CTTE
T ss_pred             cCCC
Confidence            9876

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.2e-17  Score=123.63  Aligned_cols=84  Identities=30%  Similarity=0.502  Sum_probs=70.9

Q ss_pred             hccCccccceecccCceEEEEEEeCCC-----cEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          138 ATDNYKVSRIIGQGGQGTVFKGMLTDG-----RIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       138 ~~~~~~~~~~lg~G~fg~v~~~~~~~~-----~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      ..+.|+..++||+|+||.||+|.+...     ..||||.++. .......+|++|+.+|++++|||||+++|++...+..
T Consensus         5 ~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~   84 (283)
T d1mqba_           5 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM   84 (283)
T ss_dssp             CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred             CHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCce
Confidence            345677889999999999999986432     3699999865 4444556799999999999999999999999999999


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      +++|||+.+|
T Consensus        85 ~~v~e~~~~~   94 (283)
T d1mqba_          85 MIITEYMENG   94 (283)
T ss_dssp             EEEEECCTTE
T ss_pred             EEEEEecccC
Confidence            9999999875

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=8.3e-17  Score=121.91  Aligned_cols=82  Identities=28%  Similarity=0.326  Sum_probs=71.4

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC------CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV------HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~------~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      +.|.+.+.||+|+||.||++.. .+|..||+|.++..      .....+.|.+|+.+|++++|||||++++++...+..+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            4588899999999999999995 56899999987531      1223578999999999999999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      |||||+++|
T Consensus        90 iv~E~~~gg   98 (293)
T d1jksa_          90 LILELVAGG   98 (293)
T ss_dssp             EEEECCCSC
T ss_pred             EEEEcCCCc
Confidence            999999986

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.7e-17  Score=124.91  Aligned_cols=89  Identities=29%  Similarity=0.463  Sum_probs=77.4

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEe------CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeeeeE
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGC  204 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~------~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~  204 (221)
                      ..|++++++|.+.+.||+|+||.||+|.+      ..+..||||+++. .......+|.+|+.+++++ +|||||+++|+
T Consensus        16 ~~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~   95 (311)
T d1t46a_          16 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGA   95 (311)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence            35788889999999999999999999985      2356899999876 3444566899999999999 79999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +...+..+|+|||+++|
T Consensus        96 ~~~~~~~~lvmE~~~~g  112 (311)
T d1t46a_          96 CTIGGPTLVITEYCCYG  112 (311)
T ss_dssp             ECSSSSCEEEEECCTTE
T ss_pred             EeeCCEEEEEEEcCCCC
Confidence            99999999999999876

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.68  E-value=5.6e-17  Score=125.64  Aligned_cols=82  Identities=27%  Similarity=0.441  Sum_probs=74.4

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      ++|.+.+.||+|+||.||++.. .+|..||+|.+........+.+.+|+.+|++++|||||++++++...+..+|||||+
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            4688899999999999999985 568999999997766666778999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus       106 ~gg  108 (350)
T d1koaa2         106 SGG  108 (350)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            987

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=4.5e-17  Score=121.86  Aligned_cols=82  Identities=26%  Similarity=0.456  Sum_probs=69.3

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe--CCeeEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLE--TEVPLLV  214 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~--~~~~~lv  214 (221)
                      ++|++.+.||+|+||.||++.. .+|..||+|.++.  .+....+.|.+|+.+|++++|||||++++++..  .+..+||
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            5688899999999999999985 5689999999865  344456779999999999999999999998864  4568999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        84 mEy~~~g   90 (269)
T d2java1          84 MEYCEGG   90 (269)
T ss_dssp             EECCTTE
T ss_pred             EecCCCC
Confidence            9999876

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=6e-17  Score=124.44  Aligned_cols=89  Identities=28%  Similarity=0.493  Sum_probs=73.9

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeCC-C-----cEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeeeeE
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTD-G-----RIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGC  204 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~-~-----~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~  204 (221)
                      ..|++++++|.+.+.||+|+||+||+|.... +     ..||+|.+.. ........|.+|+.+|.++ +|||||+++|+
T Consensus        30 ~kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~  109 (325)
T d1rjba_          30 LKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGA  109 (325)
T ss_dssp             GGGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEE
Confidence            3477888999999999999999999998532 2     3689998865 4445567899999999998 89999999999


Q ss_pred             EEeCCeeEEEEEcccCC
Q 036177          205 CLETEVPLLVYEFILNG  221 (221)
Q Consensus       205 ~~~~~~~~lv~e~~~~G  221 (221)
                      +...+..+|||||+++|
T Consensus       110 ~~~~~~~~lv~Ey~~~g  126 (325)
T d1rjba_         110 CTLSGPIYLIFEYCCYG  126 (325)
T ss_dssp             ECSSSSCEEEEECCTTC
T ss_pred             EeeCCeEEEEEEcCCCC
Confidence            99999999999999987

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.67  E-value=9.8e-17  Score=124.33  Aligned_cols=82  Identities=23%  Similarity=0.393  Sum_probs=73.5

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      +.|.+.+.||+|+||.||++.. .++..||+|.++.........+.+|+.+|++++|||||++++++...+..+|||||+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            4588899999999999999984 568999999987655555678999999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus       109 ~gg  111 (352)
T d1koba_         109 SGG  111 (352)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            986

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=8.3e-17  Score=119.94  Aligned_cols=82  Identities=24%  Similarity=0.384  Sum_probs=71.5

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||.||++.. .+++.||+|.+..   ........+.+|+.+|++++|||||++++++...+..+|||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4577889999999999999995 4688999998753   22344567999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        86 Ey~~~g   91 (263)
T d2j4za1          86 EYAPLG   91 (263)
T ss_dssp             ECCTTC
T ss_pred             eecCCC
Confidence            999987

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.67  E-value=3.9e-17  Score=124.50  Aligned_cols=82  Identities=28%  Similarity=0.464  Sum_probs=70.6

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCC---cccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVH---ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      +.|+..+.||+|+||.||++.. .++..||||.++...   ....+.|.+|+.+|++++|||||++++++...+..+|||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            3477789999999999999984 568899999986532   233467999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        95 E~~~~g  100 (309)
T d1u5ra_          95 EYCLGS  100 (309)
T ss_dssp             ECCSEE
T ss_pred             EecCCC
Confidence            999865

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=9.1e-17  Score=121.24  Aligned_cols=82  Identities=24%  Similarity=0.349  Sum_probs=72.0

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.++.   ......+.+.+|+.+|++++||||+++++++...+..+|||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            5688899999999999999985 5688999998854   23344577999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        88 Ey~~gg   93 (288)
T d1uu3a_          88 SYAKNG   93 (288)
T ss_dssp             CCCTTE
T ss_pred             EccCCC
Confidence            999876

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.2e-16  Score=118.55  Aligned_cols=75  Identities=29%  Similarity=0.448  Sum_probs=61.5

Q ss_pred             ceecccCceEEEEEEeCC---CcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          146 RIIGQGGQGTVFKGMLTD---GRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       146 ~~lg~G~fg~v~~~~~~~---~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      +.||+|+||.||+|.+.+   ++.||||.++.  .+....+.|++|+.+|++++|||||+++|++. .+..+|||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~-~~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEec-cCCEEEEEEcCCC
Confidence            479999999999998633   45799999864  33344578999999999999999999999985 4567899999998


Q ss_pred             C
Q 036177          221 G  221 (221)
Q Consensus       221 G  221 (221)
                      |
T Consensus        92 g   92 (277)
T d1xbba_          92 G   92 (277)
T ss_dssp             E
T ss_pred             C
Confidence            6

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.5e-16  Score=121.37  Aligned_cols=83  Identities=29%  Similarity=0.552  Sum_probs=67.5

Q ss_pred             ccCccccceecccCceEEEEEEeC-CCc--EEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEeCCeeEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT-DGR--IVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~-~~~--~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~~~~~~l  213 (221)
                      .++|++.+.||+|+||.||+|.+. ++.  .||||.++. ......+.|.+|+++|.++ +|||||+++|++...+..++
T Consensus         9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~i   88 (309)
T d1fvra_           9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   88 (309)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEE
Confidence            466778899999999999999864 343  478888754 3444567899999999999 79999999999999999999


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ||||+++|
T Consensus        89 V~ey~~~g   96 (309)
T d1fvra_          89 AIEYAPHG   96 (309)
T ss_dssp             EECCCTTC
T ss_pred             EEEecCCC
Confidence            99999987

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.5e-16  Score=119.82  Aligned_cols=82  Identities=22%  Similarity=0.322  Sum_probs=71.6

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      .++|.+.+.||+|+||+||++.. .+++.||+|.++... .....+.+|+.+|+.++|||||++++++...+..+|||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            35688899999999999999985 468899999987533 3345688999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +++|
T Consensus        83 ~~gg   86 (321)
T d1tkia_          83 ISGL   86 (321)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9876

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.64  E-value=8.3e-17  Score=122.57  Aligned_cols=83  Identities=23%  Similarity=0.330  Sum_probs=67.3

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      .+.|.+.+.||+|+||.||++.. .+++.||+|.+.. ........+.+|+.+|++++|||||++++++...+..+||||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            35588899999999999999985 4688999999864 223334568899999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+++|
T Consensus        88 ~~~gg   92 (307)
T d1a06a_          88 LVSGG   92 (307)
T ss_dssp             CCCSC
T ss_pred             ccCCC
Confidence            99876

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.2e-16  Score=117.15  Aligned_cols=80  Identities=26%  Similarity=0.376  Sum_probs=66.8

Q ss_pred             ccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEe----CCeeEEE
Q 036177          142 YKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLE----TEVPLLV  214 (221)
Q Consensus       142 ~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~----~~~~~lv  214 (221)
                      +.+.+.||+|+||.||++.. .++..||+|.++.  ......+.|.+|+++|++++|||||++++++..    ....+||
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            35567899999999999995 4578999998764  344556789999999999999999999999865    2457899


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        91 mE~~~~g   97 (270)
T d1t4ha_          91 TELMTSG   97 (270)
T ss_dssp             EECCCSC
T ss_pred             EeCCCCC
Confidence            9999987

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.63  E-value=2.6e-16  Score=120.30  Aligned_cols=82  Identities=24%  Similarity=0.442  Sum_probs=72.0

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||+||++.. .+|..||+|.++.   ......+.+.+|+.+|+.++|||||++++++...+..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            4577889999999999999995 5689999999864   23344678999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus        84 E~~~gg   89 (316)
T d1fota_          84 DYIEGG   89 (316)
T ss_dssp             CCCCSC
T ss_pred             eecCCc
Confidence            999886

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=6.2e-16  Score=117.91  Aligned_cols=77  Identities=36%  Similarity=0.661  Sum_probs=65.3

Q ss_pred             cceecccCceEEEEEEeCCC----cEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC-CeeEEEEEcc
Q 036177          145 SRIIGQGGQGTVFKGMLTDG----RIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLET-EVPLLVYEFI  218 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~~----~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-~~~~lv~e~~  218 (221)
                      .++||+|+||+||+|.+.+.    ..||||.++. .+....++|.+|+++|++++||||++++|++... ...++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            67899999999999996432    2589999875 4555668899999999999999999999998764 5789999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus       112 ~~g  114 (311)
T d1r0pa_         112 KHG  114 (311)
T ss_dssp             TTC
T ss_pred             ecC
Confidence            986

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=7.2e-16  Score=118.66  Aligned_cols=83  Identities=19%  Similarity=0.302  Sum_probs=72.8

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEE
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      .++|.+.+.||+|+||.||++.. .++..||+|.++.   ......+.+.+|+.+|++++||||+++++++...+..++|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            35688899999999999999984 5789999999864   2334567799999999999999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        84 ~ey~~gg   90 (337)
T d1o6la_          84 MEYANGG   90 (337)
T ss_dssp             EECCTTC
T ss_pred             eeccCCC
Confidence            9999987

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=7e-16  Score=117.04  Aligned_cols=81  Identities=33%  Similarity=0.517  Sum_probs=69.2

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++|+..+.||+|+||.||++.. .+++.||+|.++..  .......+.+|+.+|++++|||||++++++...+..++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            5688899999999999999994 56899999998642  23345789999999999999999999999999999999999


Q ss_pred             cccC
Q 036177          217 FILN  220 (221)
Q Consensus       217 ~~~~  220 (221)
                      |+.+
T Consensus        82 ~~~~   85 (298)
T d1gz8a_          82 FLHQ   85 (298)
T ss_dssp             CCSE
T ss_pred             ecCC
Confidence            9865

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.60  E-value=9.5e-16  Score=115.12  Aligned_cols=82  Identities=26%  Similarity=0.308  Sum_probs=69.0

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC----ee
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINEVVILSQINHRNVVKLLGCCLETE----VP  211 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~----~~  211 (221)
                      ++|.+.+.||+|+||.||++.. .+++.||+|.++..   +......|.+|+.+|+.++||||++++++....+    ..
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            5588899999999999999984 57899999998652   2334567999999999999999999999987643    37


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      +|||||+++|
T Consensus        87 ~lvmE~~~g~   96 (277)
T d1o6ya_          87 YIVMEYVDGV   96 (277)
T ss_dssp             EEEEECCCEE
T ss_pred             EEEEECCCCC
Confidence            8999999865

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.8e-16  Score=118.58  Aligned_cols=89  Identities=27%  Similarity=0.455  Sum_probs=71.1

Q ss_pred             hhhhhhccCccccceecccCceEEEEEEeCC--------CcEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeeee
Q 036177          133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTD--------GRIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLL  202 (221)
Q Consensus       133 ~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~~--------~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l~  202 (221)
                      ..|.++.++|.+.+.||+|+||.||++....        +..||||.++. .......++.+|...+.++ +|||||+++
T Consensus         6 ~~~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~   85 (299)
T d1fgka_           6 PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL   85 (299)
T ss_dssp             TTTBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CcCcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecc
Confidence            3477888999999999999999999998421        24799999876 3445567899999999988 899999999


Q ss_pred             eEEEeCCeeEEEEEcccCC
Q 036177          203 GCCLETEVPLLVYEFILNG  221 (221)
Q Consensus       203 g~~~~~~~~~lv~e~~~~G  221 (221)
                      |++...+..++||||+++|
T Consensus        86 ~~~~~~~~~~~v~e~~~~g  104 (299)
T d1fgka_          86 GACTQDGPLYVIVEYASKG  104 (299)
T ss_dssp             EEECSSSSCEEEECCCTTC
T ss_pred             cccccCCeEEEEEEccCCC
Confidence            9999999999999999987

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.60  E-value=1.1e-15  Score=114.65  Aligned_cols=82  Identities=24%  Similarity=0.366  Sum_probs=70.0

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc---------ccHHHHHHHHHHHHcCC-CCceeeeeeEEEeC
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE---------SNVEQFINEVVILSQIN-HRNVVKLLGCCLET  208 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~---------~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~  208 (221)
                      ++|++.+.||+|+||+||++.. .+++.+|+|.++....         ...+.+++|+.+|++++ ||||+++++++.+.
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            5688899999999999999984 5688999998754221         11346899999999996 99999999999999


Q ss_pred             CeeEEEEEcccCC
Q 036177          209 EVPLLVYEFILNG  221 (221)
Q Consensus       209 ~~~~lv~e~~~~G  221 (221)
                      +..+|||||+++|
T Consensus        83 ~~~~ivmE~~~~g   95 (277)
T d1phka_          83 TFFFLVFDLMKKG   95 (277)
T ss_dssp             SEEEEEEECCTTC
T ss_pred             cceEEEEEcCCCc
Confidence            9999999999986

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=7.9e-16  Score=115.24  Aligned_cols=82  Identities=29%  Similarity=0.464  Sum_probs=60.8

Q ss_pred             ccCccccceecccCceEEEEEEeC--CC--cEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCee
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGMLT--DG--RIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVP  211 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~~--~~--~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~  211 (221)
                      .++|++.+.||+|+||.||+|.+.  .+  ..||||.++.   ......++|.+|+.+|++++||||++++|++.+ +..
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~   85 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM   85 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence            456888999999999999999852  22  3689998864   233445789999999999999999999999965 467


Q ss_pred             EEEEEcccCC
Q 036177          212 LLVYEFILNG  221 (221)
Q Consensus       212 ~lv~e~~~~G  221 (221)
                      ++||||+++|
T Consensus        86 ~lv~e~~~~~   95 (273)
T d1u46a_          86 KMVTELAPLG   95 (273)
T ss_dssp             EEEEECCTTC
T ss_pred             heeeeeecCc
Confidence            8999999876

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.58  E-value=1.7e-15  Score=114.17  Aligned_cols=82  Identities=29%  Similarity=0.421  Sum_probs=72.0

Q ss_pred             cCccccceecccCceEEEEEEeCCCcEEEEEeccCC--CcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|.+.+.||+|+||.||++..+++..||+|.++..  .......|.+|+.+|++++||||+++++.+...+..++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            467888999999999999999888999999998652  333357899999999999999999999999999999999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +.+|
T Consensus        82 ~~~~   85 (286)
T d1ob3a_          82 LDQD   85 (286)
T ss_dssp             CSEE
T ss_pred             ehhh
Confidence            8653

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.9e-15  Score=115.57  Aligned_cols=82  Identities=22%  Similarity=0.411  Sum_probs=69.3

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHH-cCCCCceeeeeeEEEeCCeeEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILS-QINHRNVVKLLGCCLETEVPLLV  214 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~-~l~h~niv~l~g~~~~~~~~~lv  214 (221)
                      ++|.+.+.||+|+||+||++.. .+++.||+|.++.   ......+.+.+|..++. .++|||||++++++...+..+||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            4678899999999999999985 4688999999864   22344566778887765 68999999999999999999999


Q ss_pred             EEcccCC
Q 036177          215 YEFILNG  221 (221)
Q Consensus       215 ~e~~~~G  221 (221)
                      |||+++|
T Consensus        82 mEy~~~g   88 (320)
T d1xjda_          82 MEYLNGG   88 (320)
T ss_dssp             EECCTTC
T ss_pred             EeecCCC
Confidence            9999987

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=5.2e-15  Score=113.08  Aligned_cols=81  Identities=26%  Similarity=0.592  Sum_probs=64.4

Q ss_pred             cCccccceecccCceEEEEEEeC-CCc----EEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLT-DGR----IVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~-~~~----~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~l  213 (221)
                      .+|+..+.||+|+||.||+|.+. +|+    .||+|.++. .+....++|.+|+.+|++++|||||+++|++... ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            35788899999999999999853 343    589998865 4445577899999999999999999999998765 5678


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ++||+.+|
T Consensus        88 v~e~~~~~   95 (317)
T d1xkka_          88 ITQLMPFG   95 (317)
T ss_dssp             EEECCTTC
T ss_pred             EEEeccCC
Confidence            88988775

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.9e-15  Score=113.65  Aligned_cols=77  Identities=29%  Similarity=0.416  Sum_probs=63.4

Q ss_pred             cceecccCceEEEEEEe-CCCcEEEEEeccCCCcc-----cHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEEcc
Q 036177          145 SRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHES-----NVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI  218 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e~~  218 (221)
                      .++||+|+||+||++.. .+++.||+|.++.....     ..+.+.+|+.+|++++|||||++++++...+..+|||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            56899999999999995 56899999998642221     1346899999999999999999999999999999999999


Q ss_pred             cCC
Q 036177          219 LNG  221 (221)
Q Consensus       219 ~~G  221 (221)
                      ++|
T Consensus        83 ~~~   85 (299)
T d1ua2a_          83 ETD   85 (299)
T ss_dssp             SEE
T ss_pred             cch
Confidence            764

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=4.3e-15  Score=112.83  Aligned_cols=78  Identities=24%  Similarity=0.358  Sum_probs=62.5

Q ss_pred             cCccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHH--HHcCCCCceeeeeeEEEeCC----eeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVI--LSQINHRNVVKLLGCCLETE----VPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~g~~~~~~----~~~l  213 (221)
                      +++.+.+.||+|+||.||+|++ +|..||||.++..   ...++.+|.++  +..++||||++++|++...+    ..++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            3567788999999999999998 7899999998642   23445555554  45789999999999998653    5789


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ||||+++|
T Consensus        79 v~Ey~~~g   86 (303)
T d1vjya_          79 VSDYHEHG   86 (303)
T ss_dssp             EEECCTTC
T ss_pred             EEecccCC
Confidence            99999987

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.54  E-value=7.2e-15  Score=113.65  Aligned_cols=82  Identities=26%  Similarity=0.337  Sum_probs=71.7

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC---CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS---VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~  215 (221)
                      ++|.+.+.||+|+||.||++.. .+|..||+|.+..   ......+.+++|+.+|+.++|||||++++++......++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            4688899999999999999985 4689999998753   23344567999999999999999999999999999999999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+.+|
T Consensus       121 e~~~~g  126 (350)
T d1rdqe_         121 EYVAGG  126 (350)
T ss_dssp             ECCTTC
T ss_pred             cccccc
Confidence            999886

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=8.8e-15  Score=110.92  Aligned_cols=92  Identities=32%  Similarity=0.474  Sum_probs=74.3

Q ss_pred             echhhhhhhccCccccceecccCceEEEEEEeC------CCcEEEEEeccC-CCcccHHHHHHHHHHHHcC-CCCceeee
Q 036177          130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLT------DGRIVAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKL  201 (221)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~lg~G~fg~v~~~~~~------~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~l  201 (221)
                      ++.+.|++++++|.+.+.||+|+||.||+|.+.      .++.||+|.++. ......+.|.+|...+.++ +|+||+.+
T Consensus         3 ~~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~   82 (299)
T d1ywna1           3 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   82 (299)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEe
Confidence            345778889999999999999999999999852      245799999875 4444567788999888887 79999999


Q ss_pred             eeEEEeC-CeeEEEEEcccCC
Q 036177          202 LGCCLET-EVPLLVYEFILNG  221 (221)
Q Consensus       202 ~g~~~~~-~~~~lv~e~~~~G  221 (221)
                      ++++... ...+++|||+++|
T Consensus        83 ~~~~~~~~~~~~iv~E~~~~g  103 (299)
T d1ywna1          83 LGACTKPGGPLMVIVEFCKFG  103 (299)
T ss_dssp             EEEECSTTSCCEEEEECCTTC
T ss_pred             eeeeccCCCeEEEEEEecCCC
Confidence            9998764 4689999999987

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2e-14  Score=108.45  Aligned_cols=82  Identities=29%  Similarity=0.445  Sum_probs=71.1

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCCeeEEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYE  216 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~~~~lv~e  216 (221)
                      ++|.+.+.||+|+||+||++.. .++..||||+++.  ........+++|+.+|+.++||||+++.+.+......++++|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            4678889999999999999995 5688999999854  333446789999999999999999999999999999999999


Q ss_pred             cccCC
Q 036177          217 FILNG  221 (221)
Q Consensus       217 ~~~~G  221 (221)
                      |+.+|
T Consensus        82 ~~~~~   86 (292)
T d1unla_          82 FCDQD   86 (292)
T ss_dssp             CCSEE
T ss_pred             ecccc
Confidence            98653

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.50  E-value=1.5e-14  Score=112.50  Aligned_cols=82  Identities=21%  Similarity=0.327  Sum_probs=66.3

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCC---CcccHHHHHHH---HHHHHcCCCCceeeeeeEEEeCCeeE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSV---HESNVEQFINE---VVILSQINHRNVVKLLGCCLETEVPL  212 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~---~~~~~~~~~~e---~~~l~~l~h~niv~l~g~~~~~~~~~  212 (221)
                      ++|.+.+.||+|+||.||++.. .+|..||+|.+...   .......+.+|   +.+++.++|||||++++++...+..+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            5688899999999999999995 46899999987531   11222334444   66777889999999999999999999


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      +||||+++|
T Consensus        84 ivmE~~~gg   92 (364)
T d1omwa3          84 FILDLMNGG   92 (364)
T ss_dssp             EEECCCCSC
T ss_pred             EEEEecCCC
Confidence            999999986

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2e-14  Score=111.48  Aligned_cols=82  Identities=27%  Similarity=0.401  Sum_probs=67.1

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC------Ce
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLET------EV  210 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~~  210 (221)
                      ++|.+.+.||+|+||+||++.. .+|..||||+++.  .+......+.+|+.+|++++||||+++++++...      ..
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            5688899999999999999995 4689999999864  3344456799999999999999999999998643      57


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      +++||||+.+|
T Consensus        97 ~~iv~Ey~~~~  107 (355)
T d2b1pa1          97 VYLVMELMDAN  107 (355)
T ss_dssp             EEEEEECCSEE
T ss_pred             eEEEEeccchH
Confidence            89999999754

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=5.3e-14  Score=107.43  Aligned_cols=83  Identities=33%  Similarity=0.446  Sum_probs=67.4

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC-------
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLET-------  208 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-------  208 (221)
                      .++|++.+.||+|+||+||++.. .+++.||||++..  ........+.+|+.+|++++||||+++++++...       
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            36788899999999999999995 5789999998753  3344557799999999999999999999988553       


Q ss_pred             -CeeEEEEEcccCC
Q 036177          209 -EVPLLVYEFILNG  221 (221)
Q Consensus       209 -~~~~lv~e~~~~G  221 (221)
                       ...+++|||+++|
T Consensus        89 ~~~~~iv~e~~~~~  102 (318)
T d3blha1          89 KGSIYLVFDFCEHD  102 (318)
T ss_dssp             --CEEEEEECCCEE
T ss_pred             CceEEEEEeccCCC
Confidence             3578999998753

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.45  E-value=9.2e-14  Score=106.55  Aligned_cols=79  Identities=29%  Similarity=0.492  Sum_probs=67.6

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-CCceeeeeeEEEeC--CeeEEEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-HRNVVKLLGCCLET--EVPLLVY  215 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~--~~~~lv~  215 (221)
                      ++|++.+.||+|+||+||++.. .+++.||+|+++..   ..+.+.+|+.+|.+++ ||||+++++++...  ...++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            5688899999999999999985 56889999998643   3467899999999994 99999999998753  4688999


Q ss_pred             EcccCC
Q 036177          216 EFILNG  221 (221)
Q Consensus       216 e~~~~G  221 (221)
                      ||+++|
T Consensus       112 e~~~~~  117 (328)
T d3bqca1         112 EHVNNT  117 (328)
T ss_dssp             ECCCSC
T ss_pred             eecCCC
Confidence            999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=6.9e-14  Score=108.06  Aligned_cols=81  Identities=27%  Similarity=0.333  Sum_probs=62.5

Q ss_pred             ccCccccceecccCceEEEEEEe-CCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC------
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE------  209 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~------  209 (221)
                      .++|...+.||+|+||.||++.. .+++.||+|.++.  .+....+.+.+|+.+|+.++|||||++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            46788899999999999999995 5689999999864  33344567999999999999999999999987654      


Q ss_pred             eeEEEEEccc
Q 036177          210 VPLLVYEFIL  219 (221)
Q Consensus       210 ~~~lv~e~~~  219 (221)
                      ..++||||+.
T Consensus        97 ~~~lv~e~~~  106 (346)
T d1cm8a_          97 DFYLVMPFMG  106 (346)
T ss_dssp             CCEEEEECCS
T ss_pred             eEEEEEeccc
Confidence            4699999984

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=2.9e-14  Score=106.61  Aligned_cols=81  Identities=27%  Similarity=0.431  Sum_probs=67.3

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCc------ccHHHHHHHHHHHHcCC--CCceeeeeeEEEeCCe
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHE------SNVEQFINEVVILSQIN--HRNVVKLLGCCLETEV  210 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~------~~~~~~~~e~~~l~~l~--h~niv~l~g~~~~~~~  210 (221)
                      ++|.+.+.||+|+||.||++.. .++..||+|.++....      .....+.+|+.+|++++  |||||++++++...+.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            4588899999999999999994 5689999998754211      11234779999999986  9999999999999999


Q ss_pred             eEEEEEcccC
Q 036177          211 PLLVYEFILN  220 (221)
Q Consensus       211 ~~lv~e~~~~  220 (221)
                      .++||||+.+
T Consensus        84 ~~lv~e~~~~   93 (273)
T d1xwsa_          84 FVLILERPEP   93 (273)
T ss_dssp             EEEEEECCSS
T ss_pred             EEEEEEeccC
Confidence            9999999864

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=7.7e-14  Score=107.92  Aligned_cols=77  Identities=26%  Similarity=0.435  Sum_probs=62.6

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC------CeeEE
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLET------EVPLL  213 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~------~~~~l  213 (221)
                      +|...++||+|+||+||++.. .+++.||||.++....    .+.+|+.+|++++||||+++++++...      ...+|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            366678999999999999995 4689999999865332    234899999999999999999998543      24789


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      ||||+++|
T Consensus        97 v~Ey~~~~  104 (350)
T d1q5ka_          97 VLDYVPET  104 (350)
T ss_dssp             EEECCSEE
T ss_pred             EEeccCCc
Confidence            99999754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.5e-13  Score=105.61  Aligned_cols=77  Identities=22%  Similarity=0.336  Sum_probs=62.8

Q ss_pred             cCcccc-ceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcC-CCCceeeeeeEEEe----CCeeE
Q 036177          140 DNYKVS-RIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLE----TEVPL  212 (221)
Q Consensus       140 ~~~~~~-~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~g~~~~----~~~~~  212 (221)
                      ++|.+. +.||+|+||.||++.. .++..||+|.++.     ...+.+|+.++.++ +|||||++++++..    ....+
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            456655 5699999999999984 5689999999853     34578999987655 89999999998865    35689


Q ss_pred             EEEEcccCC
Q 036177          213 LVYEFILNG  221 (221)
Q Consensus       213 lv~e~~~~G  221 (221)
                      |||||+++|
T Consensus        86 ivmEy~~gg   94 (335)
T d2ozaa1          86 IVMECLDGG   94 (335)
T ss_dssp             EEEECCCSE
T ss_pred             EEEECCCCC
Confidence            999999986

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.2e-13  Score=105.53  Aligned_cols=82  Identities=23%  Similarity=0.363  Sum_probs=69.3

Q ss_pred             cCccccceecccCceEEEEEEe----CCCcEEEEEeccCC----CcccHHHHHHHHHHHHcCCC-CceeeeeeEEEeCCe
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSV----HESNVEQFINEVVILSQINH-RNVVKLLGCCLETEV  210 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~----~~~~~vavk~~~~~----~~~~~~~~~~e~~~l~~l~h-~niv~l~g~~~~~~~  210 (221)
                      ++|.+.+.||+|+||.||++..    .+|+.||+|.++..    .....+.+.+|+.+|++++| |||+++++.......
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5688899999999999999974    24789999988642    22335678999999999965 899999999999999


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+++|||+.+|
T Consensus       104 ~~~v~e~~~~~  114 (322)
T d1vzoa_         104 LHLILDYINGG  114 (322)
T ss_dssp             EEEEECCCCSC
T ss_pred             eeeeeeccccc
Confidence            99999999876

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2.8e-13  Score=104.59  Aligned_cols=83  Identities=22%  Similarity=0.326  Sum_probs=66.4

Q ss_pred             ccCccccceecccCceEEEEEE-eCCCcEEEEEeccC--CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeC-----Ce
Q 036177          139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKS--VHESNVEQFINEVVILSQINHRNVVKLLGCCLET-----EV  210 (221)
Q Consensus       139 ~~~~~~~~~lg~G~fg~v~~~~-~~~~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~-----~~  210 (221)
                      .++|.+.+.||+|+||+||++. ..+++.||||.++.  .+....+.+.+|+.+|++++|||||++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            3568889999999999999998 45789999999865  2334456789999999999999999999988643     23


Q ss_pred             eEEEEEcccCC
Q 036177          211 PLLVYEFILNG  221 (221)
Q Consensus       211 ~~lv~e~~~~G  221 (221)
                      .+++++|+.+|
T Consensus        97 ~~~i~~~~~gg  107 (348)
T d2gfsa1          97 DVYLVTHLMGA  107 (348)
T ss_dssp             CCEEEEECCSE
T ss_pred             eEEEEEeecCC
Confidence            46667777654

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=4e-13  Score=103.63  Aligned_cols=82  Identities=20%  Similarity=0.313  Sum_probs=61.9

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccC-CCcccHHHHHHHHHHHHcCCCCceeeeeeEEEeCC----eeEE
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVVKLLGCCLETE----VPLL  213 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~g~~~~~~----~~~l  213 (221)
                      ++|.+.+.||+|+||+||++.. .+++.||||.++. ......+.+++|+.+|+.++||||+++++++....    ..++
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            4588899999999999999984 5799999999865 33444668999999999999999999999986643    2344


Q ss_pred             EEEcccCC
Q 036177          214 VYEFILNG  221 (221)
Q Consensus       214 v~e~~~~G  221 (221)
                      +++|+.+|
T Consensus        88 l~~~~~~g   95 (345)
T d1pmea_          88 LVTHLMGA   95 (345)
T ss_dssp             EEEECCCE
T ss_pred             EEEeecCC
Confidence            45555543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=5.1e-13  Score=101.27  Aligned_cols=82  Identities=33%  Similarity=0.522  Sum_probs=63.6

Q ss_pred             cCccccceecccCceEEEEEEe-CC-CcEEEEEeccC--CCcccHHHHHHHHHHHHcC---CCCceeeeeeEEEeC----
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TD-GRIVAVKKSKS--VHESNVEQFINEVVILSQI---NHRNVVKLLGCCLET----  208 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~-~~~vavk~~~~--~~~~~~~~~~~e~~~l~~l---~h~niv~l~g~~~~~----  208 (221)
                      ++|++.+.||+|+||.||++.. .+ ++.||+|.++.  ........+.+|+.+|+.+   +||||+++++++...    
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~   86 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   86 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence            5688899999999999999985 33 56799998754  2333344577888777665   899999999988542    


Q ss_pred             -CeeEEEEEcccCC
Q 036177          209 -EVPLLVYEFILNG  221 (221)
Q Consensus       209 -~~~~lv~e~~~~G  221 (221)
                       ...++++||+.+|
T Consensus        87 ~~~~~~~~e~~~~~  100 (305)
T d1blxa_          87 ETKLTLVFEHVDQD  100 (305)
T ss_dssp             EEEEEEEEECCSCB
T ss_pred             CceEEEEEEeccCC
Confidence             3678999999865

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.23  E-value=1.1e-11  Score=93.52  Aligned_cols=80  Identities=23%  Similarity=0.323  Sum_probs=63.1

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCCCceeeee-eEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLL-GCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~-g~~~~~~~~~lv~e~  217 (221)
                      ++|++.+.||+|+||.||+|.. .+++.||||.+.....  ..++.+|+++++.++|+|++.++ +.....+..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            4588899999999999999985 5688999998765322  24588999999999877766555 455667888999999


Q ss_pred             ccCC
Q 036177          218 ILNG  221 (221)
Q Consensus       218 ~~~G  221 (221)
                      +.++
T Consensus        85 ~~~~   88 (299)
T d1ckia_          85 LGPS   88 (299)
T ss_dssp             CCCB
T ss_pred             cCCc
Confidence            8653

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.23  E-value=1.4e-11  Score=92.71  Aligned_cols=78  Identities=23%  Similarity=0.300  Sum_probs=65.5

Q ss_pred             cCccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCCC-CceeeeeeEEEeCCeeEEEEEc
Q 036177          140 DNYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQINH-RNVVKLLGCCLETEVPLLVYEF  217 (221)
Q Consensus       140 ~~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~g~~~~~~~~~lv~e~  217 (221)
                      ++|.+.+.||+|+||.||+|.. .+++.||+|.+....  ....+.+|++.++.++| +|++.+.++.......++||||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            4688899999999999999994 468899999875422  22457889999999954 9999999999999999999999


Q ss_pred             cc
Q 036177          218 IL  219 (221)
Q Consensus       218 ~~  219 (221)
                      +.
T Consensus        83 ~~   84 (293)
T d1csna_          83 LG   84 (293)
T ss_dssp             CC
T ss_pred             cC
Confidence            85

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.84  E-value=5e-09  Score=73.45  Aligned_cols=73  Identities=22%  Similarity=0.238  Sum_probs=55.3

Q ss_pred             ccceecccCceEEEEEEeCCCcEEEEEeccCCCcc------------------cHHHHHHHHHHHHcCCCCceeeeeeEE
Q 036177          144 VSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHES------------------NVEQFINEVVILSQINHRNVVKLLGCC  205 (221)
Q Consensus       144 ~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~------------------~~~~~~~e~~~l~~l~h~niv~l~g~~  205 (221)
                      +.+.||+|+||.||+|...+|..||||.++.....                  ......+|...|.++.|++++..++..
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            47899999999999999878999999986531110                  122356788889999999999877552


Q ss_pred             EeCCeeEEEEEcccC
Q 036177          206 LETEVPLLVYEFILN  220 (221)
Q Consensus       206 ~~~~~~~lv~e~~~~  220 (221)
                          ..+++|||+++
T Consensus        84 ----~~~lvme~~~~   94 (191)
T d1zara2          84 ----GNAVLMELIDA   94 (191)
T ss_dssp             ----TTEEEEECCCC
T ss_pred             ----CCEEEEEeecc
Confidence                24799999875

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.84  E-value=3.1e-09  Score=81.86  Aligned_cols=78  Identities=23%  Similarity=0.276  Sum_probs=60.2

Q ss_pred             CccccceecccCceEEEEEEe-CCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-----------CCceeeeeeEEEe-
Q 036177          141 NYKVSRIIGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-----------HRNVVKLLGCCLE-  207 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~-~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~g~~~~-  207 (221)
                      +|++.++||+|+||+||++.. .+|+.||||+++... ...+.+.+|+.+|+.++           |+||++++++... 
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            488899999999999999985 578999999987532 33467889999888775           5789999988754 


Q ss_pred             -CCeeEEEEEccc
Q 036177          208 -TEVPLLVYEFIL  219 (221)
Q Consensus       208 -~~~~~lv~e~~~  219 (221)
                       ....+++++++.
T Consensus        93 ~~~~~~~~~~~~~  105 (362)
T d1q8ya_          93 GPNGVHVVMVFEV  105 (362)
T ss_dssp             ETTEEEEEEEECC
T ss_pred             cccceeeeeeecc
Confidence             345566666553

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=2.3e-09  Score=55.41  Aligned_cols=38  Identities=45%  Similarity=0.905  Sum_probs=32.1

Q ss_pred             CCcccccccCCCCCCCCCceeecCCceeeeCCCCccCCC
Q 036177           17 RATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        17 ~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      .|.|++||..+ +..|++.|.|+.|+|.|.|+.||..++
T Consensus         1 sCvDidEC~~~-~~~~~~~C~Nt~Gsy~C~C~~Gy~~~g   38 (43)
T d1emoa1           1 SAVDMDECKEP-DVCKHGQCINTDGSYRCECPFGYILAG   38 (43)
T ss_dssp             CCCCCCSSSST-TSCSSSCCCCCSSCCCCCCCTTEEESS
T ss_pred             CCcceeccCCc-CCCCCCEeECCCCCeEeECCCCcccCC
Confidence            48899999753 445688999999999999999998765

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=4.6e-09  Score=54.40  Aligned_cols=40  Identities=48%  Similarity=0.937  Sum_probs=32.8

Q ss_pred             cccccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-cc
Q 036177           19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GC   59 (221)
Q Consensus        19 ~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c   59 (221)
                      .||+||..+. ..|++.|.|+.|+|.|.|+.||..++.. .|
T Consensus         1 TDidEC~~~~-~~c~~~C~Nt~G~y~C~C~~Gy~l~~d~~~C   41 (43)
T d1uzka1           1 TDVNECLDPT-TCISGNCVNTPGSYICDCPPDFELNPTRVGC   41 (43)
T ss_dssp             CCCCGGGSTT-SSBTSEEEEETTEEEEECCTTCEECTTSSBE
T ss_pred             CCccccCCCC-cCcCCEeECCCCCEEEecCCCCEECCCCCcc
Confidence            4899998643 3468999999999999999999887755 44

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=3.5e-09  Score=54.71  Aligned_cols=38  Identities=47%  Similarity=0.995  Sum_probs=31.1

Q ss_pred             cccccccCCCCCCC-CCceeecCCceeeeCCCCccCCCcc
Q 036177           19 TDIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus        19 ~~~~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      +||+||.... ..| ++.|.|++|+|.|.|+.||..+...
T Consensus         1 qDinEC~~~~-~~c~~~~C~Nt~Gsy~C~C~~Gy~l~~~~   39 (43)
T d1uzka2           1 EDIDECQELP-GLCQGGKCINTFGSFQCRCPTGYYLNEDT   39 (43)
T ss_dssp             EECCHHHHCG-GGGBTSEEEECSSCEEEECCTTCCBCTTT
T ss_pred             CCcccccCCC-CCcCCCEEECCCCCeEeECCCCCeECcCC
Confidence            5899998532 245 7899999999999999999887654

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=6.4e-09  Score=53.41  Aligned_cols=37  Identities=46%  Similarity=0.945  Sum_probs=30.4

Q ss_pred             ccccccCCCCCCC-CCceeecCCceeeeCCCCccCCCcc
Q 036177           20 DIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus        20 ~~~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~~~~~   57 (221)
                      |++||... +..| ++.|.|+.|+|.|.|+.||..++..
T Consensus         1 DidEC~~~-~~~C~~~~C~Nt~Gsy~C~C~~Gy~l~~d~   38 (42)
T d1lmja2           1 DIDECQRD-PLLCRGGVCHNTEGSYRCECPPGHQLSPNI   38 (42)
T ss_dssp             ECCHHHHC-SSTTTTSEEEEETTEEEEESCTTSCCCSSS
T ss_pred             CccccCCC-CCCCCCCEeECCCCCeEEeCCCCCeECcCC
Confidence            78999753 3355 7799999999999999999877654

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=1e-08  Score=52.96  Aligned_cols=36  Identities=42%  Similarity=0.782  Sum_probs=29.5

Q ss_pred             cccccccCCCCCCC-CCceeecCCceeeeCCCCccCCC
Q 036177           19 TDIDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        19 ~~~~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      .|++||... +..| ++.|.|+.|+|.|.|+.||.++.
T Consensus         1 TDidEC~~~-~~~C~~~~C~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1           1 TDIDECRIS-PDLCGRGQCVNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             CCCCTTTTC-SSTTTTSCEEEETTEEEECCCSSEEECT
T ss_pred             CcccccCCC-CCCCCCCEeEcCCCCeEEeCCCCCccCC
Confidence            489999753 3345 67999999999999999998764

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=9.5e-09  Score=51.65  Aligned_cols=34  Identities=38%  Similarity=0.763  Sum_probs=29.6

Q ss_pred             ccccccCCCCCCCCCceeecCCceeeeCCCCccCCC
Q 036177           20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        20 ~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      |++||...  ..|+..|.|+.|+|+|.|+.||..++
T Consensus         1 DidEC~~~--~~C~~~C~N~~Gsy~C~C~~Gy~l~g   34 (40)
T d1dx5i3           1 DIDECENG--GFCSGVCHNLPGTFECICGPDSALAG   34 (40)
T ss_dssp             ECCHHHHC--SSCSSEEEECSSSEEEEECSSSSCEE
T ss_pred             CccccCCC--cCccCEeeCCCCCeEeECCCCCeeCC
Confidence            78999753  47888999999999999999998764

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=4.2e-08  Score=49.99  Aligned_cols=38  Identities=39%  Similarity=0.855  Sum_probs=31.5

Q ss_pred             cccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           21 IDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        21 ~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      ++||..  +.+|+..|.|+.|+|.|.|+.||..+++. .|.
T Consensus         1 idEC~~--~~~C~~~C~n~~Gsy~C~C~~Gy~L~~d~~~C~   39 (41)
T d1i0ua2           1 IDECQD--PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK   39 (41)
T ss_dssp             CCTTTT--TTSCSSCEECSSSCCEECCCTTEEECTTTCCEE
T ss_pred             CccCCC--CCCCCCEeECCCCCEEeECCCCCeECCCCCccc
Confidence            578864  34888899999999999999999987765 554

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=1.1e-07  Score=48.42  Aligned_cols=39  Identities=33%  Similarity=0.795  Sum_probs=31.3

Q ss_pred             ccccCCCCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           22 DECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        22 ~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      +||....+..|+..|.|+.|+|+|.|+.||..+.+. .|.
T Consensus         1 dEC~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2           1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCCCCCCCcCCCCEeecCCCCEEEeCCCCCEECCCCCeec
Confidence            578654556888899999999999999999887765 554

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=1.1e-07  Score=51.50  Aligned_cols=42  Identities=31%  Similarity=0.792  Sum_probs=31.2

Q ss_pred             cccccccCCC-------CCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           19 TDIDECLDKE-------KYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        19 ~~~~~C~~~~-------~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      .||+||....       ..+|+..|.|++|+|.|.|+.||..+.+. .|.
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            4777776422       23456689999999999999999877655 554

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=2.1e-07  Score=48.36  Aligned_cols=40  Identities=30%  Similarity=0.733  Sum_probs=31.0

Q ss_pred             cccccCCC--CCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           21 IDECLDKE--KYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        21 ~~~C~~~~--~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      |+||....  ...|+..|.|++|+|+|.|+.||....+. .|.
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~   43 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCS   43 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEECCCCCeECCCCCCcc
Confidence            57886432  23578899999999999999999877665 554

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=2.9e-07  Score=47.14  Aligned_cols=36  Identities=44%  Similarity=0.930  Sum_probs=29.5

Q ss_pred             cccccccCCCCCCC--CCceeecCCceeeeCCCCccCCC
Q 036177           19 TDIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        19 ~~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      +|+++|.. ....|  .++|.+..++|+|.|+.||.|..
T Consensus         1 qDideC~~-~~~pC~n~g~C~n~~g~y~C~C~~G~~G~~   38 (42)
T d2vj3a1           1 QDVDECSL-GANPCEHAGKCINTLGSFECQCLQGYTGPR   38 (42)
T ss_dssp             CCCCTTTS-SSCSSSTTCEEEECSSSEEEECCTTEESTT
T ss_pred             CCCccccC-CCCCCCCCcEeECCCCCEEeECCCCCcCCC
Confidence            47899964 22356  78999999999999999998875

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.27  E-value=2.1e-07  Score=48.39  Aligned_cols=40  Identities=30%  Similarity=0.812  Sum_probs=29.2

Q ss_pred             cccccCC--CCCCCCCceeecCCceeeeCCCCccCCCcc-ccc
Q 036177           21 IDECLDK--EKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCR   60 (221)
Q Consensus        21 ~~~C~~~--~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~   60 (221)
                      |+||...  ...+|+..|.|+.|+|.|.|++||....+. .|.
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~C~~Gy~L~~d~~tC~   43 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCS   43 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEeCCCCCEECCCCCccc
Confidence            5778642  234688899999999999999999877665 554

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.3e-06  Score=43.84  Aligned_cols=34  Identities=32%  Similarity=0.662  Sum_probs=28.5

Q ss_pred             cccccCCCCCCCCCceeecCCceeeeCCCCccCCC
Q 036177           21 IDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        21 ~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      +++|.. .+..|+-.|.|++++|.|.|+.||...+
T Consensus         2 ~neC~~-~nggC~h~C~n~~g~~~C~C~~Gy~L~d   35 (40)
T d3bpse1           2 TNECLD-NNGGCSHVCNDLKIGYECLCPDGFQLVA   35 (40)
T ss_dssp             SCGGGT-GGGGCSSEEEECSSSEEEECCTTCCEET
T ss_pred             cccCCC-CCCCCcCEEEcCCCCEEEECCCCCEECC
Confidence            578865 4568888999999999999999998753

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=7.5e-06  Score=38.61  Aligned_cols=36  Identities=39%  Similarity=0.903  Sum_probs=27.9

Q ss_pred             ccccCCCCCCC-CCceeecCCceeeeCCCCccCCCcccc
Q 036177           22 DECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDGKVGC   59 (221)
Q Consensus        22 ~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~~~~~~c   59 (221)
                      ++|.-.  ..| +|+|+|..|+|.|.|.+||...+-..|
T Consensus         2 dECsig--npCGnGTCtNviGgFec~C~~GFepgpmm~C   38 (39)
T d1emoa2           2 DECSVG--NPCGNGTCKNVIGGFECTCEEGFEPGPMMTC   38 (39)
T ss_dssp             CGGGTT--CSSSSSCEEECSSSEEECCSSSSCCCSSSCC
T ss_pred             CccccC--CccCCceeeecccceEEeecCCcCCCcceec
Confidence            577642  377 899999999999999999976654333

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.3e-05  Score=39.86  Aligned_cols=33  Identities=45%  Similarity=1.046  Sum_probs=27.7

Q ss_pred             ccccccCCCCCCC--CCceeecCCceeeeCCCCccCCC
Q 036177           20 DIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        20 ~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      |+++|.. .  +|  .++|.+..++|+|.|+.||.|..
T Consensus         2 d~d~C~~-~--PC~ngg~C~~~~~~y~C~C~~g~~G~~   36 (39)
T d1edmb_           2 DGDQCES-N--PCLNGGSCKDDINSYECWCPFGFEGKN   36 (39)
T ss_dssp             CCCTTTT-C--CCCTTCEEEEETTEEEEECCTTCCSTT
T ss_pred             ccccCCC-C--CCCCCcEEEcCCCCEEEECCCCCCCCC
Confidence            6778864 3  56  78999999999999999998875

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.74  E-value=1.1e-05  Score=39.70  Aligned_cols=33  Identities=36%  Similarity=0.825  Sum_probs=27.7

Q ss_pred             ccccccCCCCCCC--CCceeecCCceeeeCCCCccCCC
Q 036177           20 DIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        20 ~~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      |+++|.. .  +|  .++|.+..++|+|.|+.||.|..
T Consensus         1 D~d~C~~-~--PC~ngg~C~~~~~~y~C~C~~g~~G~~   35 (37)
T d2c4fl1           1 DGDQCAS-S--PCQNGGSCKDQLQSYICFCLPAFEGRN   35 (37)
T ss_dssp             TCCGGGG-C--CCCTTCEEEEETTEEEEECCTTEESTT
T ss_pred             CcccCCC-C--CCCCCCEEECCCCCeEEECCCCCcCCC
Confidence            6788874 3  56  78999999999999999998875

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=4.4e-05  Score=37.85  Aligned_cols=32  Identities=31%  Similarity=0.885  Sum_probs=26.4

Q ss_pred             cccccCCCCCCC--CCceeecCCceeeeCCCCccCCC
Q 036177           21 IDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        21 ~~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      |++|.. .  +|  .++|.+..++|+|.|+.||.|..
T Consensus         1 Id~C~~-~--PC~n~g~C~~~~~~y~C~C~~G~~G~~   34 (39)
T d2vj3a2           1 VNECVS-N--PCQNDATCLDQIGEFQCICMPGYEGVH   34 (39)
T ss_dssp             CCTTTT-C--CCCSSCEEEECSSCEEEECCTTEESSS
T ss_pred             CcCCcC-C--CCCCCCEEECCCCCEEEeCCCCCccCc
Confidence            467754 3  56  78999999999999999999876

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.39  E-value=3.8e-05  Score=38.27  Aligned_cols=24  Identities=21%  Similarity=0.780  Sum_probs=22.1

Q ss_pred             CCceeecCCceeeeCCCCccCCCc
Q 036177           33 EGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        33 ~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      +..|.|++|+|.|.|+.||.+++.
T Consensus        12 ~A~C~Nt~Gsy~C~C~~Gy~GdG~   35 (40)
T d1gl4a2          12 HAECRDYATGFCCRCVANYTGNGR   35 (40)
T ss_dssp             TEEEEECSSCEEEEECTTEEECSS
T ss_pred             CCEeecCCCCeEeECCCCCcCCCC
Confidence            679999999999999999999874

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.0002  Score=34.46  Aligned_cols=25  Identities=36%  Similarity=1.113  Sum_probs=22.1

Q ss_pred             CC--CCceeecCCceeeeCCCCccCCC
Q 036177           31 HC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        31 ~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      +|  .++|.+..++|+|.|+.||.|..
T Consensus         7 PC~ngg~C~~~~~~y~C~C~~g~~G~~   33 (35)
T d2vj3a3           7 PCLHNGRCLDKINEFQCECPTGFTGHL   33 (35)
T ss_dssp             CSTTTCEEEECSSCEEEECCTTEESSS
T ss_pred             CCCCCcEEECCCCCeEEECCCCCCCCC
Confidence            55  78999999999999999998875

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.12  E-value=0.00011  Score=38.53  Aligned_cols=33  Identities=21%  Similarity=0.516  Sum_probs=27.7

Q ss_pred             CCCCCCceeecCCceeeeCCCCccCCCcc-cccc
Q 036177           29 KYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCRG   61 (221)
Q Consensus        29 ~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~~   61 (221)
                      +..|+..|.++.+++.|.|+.||....+. .|.+
T Consensus         6 NGgC~~~C~~~~g~~~C~C~~Gy~L~~D~~tC~~   39 (50)
T d1autl2           6 NGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP   39 (50)
T ss_dssp             GGGCSSEEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred             CCCcccEeecCCCCeEEECCCCCEECCCCCcccc
Confidence            44788899999999999999999988776 6653

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00011  Score=38.74  Aligned_cols=33  Identities=21%  Similarity=0.470  Sum_probs=27.7

Q ss_pred             CCCCCCceeecCCceeeeCCCCccCCCcc-cccc
Q 036177           29 KYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCRG   61 (221)
Q Consensus        29 ~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~~   61 (221)
                      +..|+..|.++++++.|.|+.||..+++. .|.+
T Consensus         7 NGgC~h~C~n~~g~~~C~C~~Gy~L~~D~~tC~~   40 (51)
T d2p3ua1           7 NGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP   40 (51)
T ss_dssp             GGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCCcccEeecCCCCeEeEcCCCCEECCCCCcccc
Confidence            44788899999999999999999987766 6654

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00012  Score=37.96  Aligned_cols=33  Identities=36%  Similarity=0.794  Sum_probs=26.4

Q ss_pred             cccccCCCCCCC-CCceeecCCceeeeCCCCccCCCc
Q 036177           21 IDECLDKEKYHC-EGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        21 ~~~C~~~~~~~c-~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      .+.|.+ .  +| +|+|.+..++|+|.|+.||.|...
T Consensus         8 ~~~C~~-~--PC~nG~C~~~~~~y~C~C~~G~~G~~C   41 (48)
T d1autl1           8 EHPCAS-L--CCGHGTCIDGIGSFSCDCRSGWEGRFC   41 (48)
T ss_dssp             CCSSSS-T--TTTSEEECCCSSCCCEEECTTEESTTS
T ss_pred             CCcccC-C--CCCCCEEECCCCCCeEeCCCCCcCCCc
Confidence            456654 2  55 789999999999999999998863

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00019  Score=35.49  Aligned_cols=32  Identities=44%  Similarity=1.052  Sum_probs=25.4

Q ss_pred             ccccCCCCCCC--CCceeecCCceeeeCCCCccCCCc
Q 036177           22 DECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        22 ~~C~~~~~~~c--~~~C~~~~~~~~C~C~~g~~~~~~   56 (221)
                      ++|.. .  +|  .+.|.+..++|.|.|+.||.|...
T Consensus         1 D~C~~-~--PC~ngg~C~~~~~~y~C~C~~G~~G~~C   34 (39)
T d1xkba1           1 DQCET-S--PCQNQGKCKDGLGEYTCTCLEGFEGKNC   34 (39)
T ss_dssp             CTTTT-C--CCCSSCEECCCSSSCCEECCTTEETTTT
T ss_pred             CcCCC-C--CCCCCcEEECCCCCEEEECCCCCCcCcC
Confidence            35643 2  55  689999999999999999998763

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.98  E-value=0.00018  Score=37.94  Aligned_cols=34  Identities=18%  Similarity=0.515  Sum_probs=28.1

Q ss_pred             CCCCCCCceeecCCceeeeCCCCccCCCcc-cccc
Q 036177           28 EKYHCEGKCKNTIGSYTCDCPIGMYGDGKV-GCRG   61 (221)
Q Consensus        28 ~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~-~c~~   61 (221)
                      ++..|+..|.++.+++.|.|+.||..+.+. .|.+
T Consensus         4 ~NGgC~h~C~~~~~~~~C~C~~Gy~L~~D~~tC~~   38 (51)
T d1kigl_           4 DNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVS   38 (51)
T ss_dssp             TTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEE
T ss_pred             CCCCcccEeEcCCCcEEeEcCCCCEECCCCCcccc
Confidence            355788899999999999999999887766 6653

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00026  Score=37.05  Aligned_cols=37  Identities=24%  Similarity=0.525  Sum_probs=26.7

Q ss_pred             ccccCCCCCCCCCcee------ecCCceeeeCCCCccCCCcc-cc
Q 036177           22 DECLDKEKYHCEGKCK------NTIGSYTCDCPIGMYGDGKV-GC   59 (221)
Q Consensus        22 ~~C~~~~~~~c~~~C~------~~~~~~~C~C~~g~~~~~~~-~c   59 (221)
                      ++|.. .+..|+-.|-      +..++|.|.|+.||....+. .|
T Consensus         5 neC~~-~NGGC~h~Cl~~p~~~n~~~~y~C~C~~G~~L~~D~~tC   48 (50)
T d1ijqa2           5 ERTTL-SNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC   48 (50)
T ss_dssp             SSSSS-GGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCE
T ss_pred             cccCC-CCCCCcCccCCCcCcccCCCCEEEeCCCCCEECCCCCcc
Confidence            34433 3447888884      45689999999999988765 55

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.00078  Score=33.38  Aligned_cols=25  Identities=52%  Similarity=1.256  Sum_probs=22.5

Q ss_pred             CC--CCceeecCCceeeeCCCCccCCC
Q 036177           31 HC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        31 ~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      +|  .|.|....++|+|.|+.||.|..
T Consensus         8 pC~ngg~C~~~~~~y~C~C~~g~~G~~   34 (40)
T d1g1sa2           8 SCSKQGECLETIGNYTCSCYPGFYGPE   34 (40)
T ss_dssp             GGGGSEEEEECSSSEEEEECTTEESTT
T ss_pred             cCCCCcEEECCCCCeEEeCCCCccCCC
Confidence            56  78999999999999999999876

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00065  Score=33.48  Aligned_cols=25  Identities=44%  Similarity=1.016  Sum_probs=22.5

Q ss_pred             CC--CCceeecCCceeeeCCCCccCCC
Q 036177           31 HC--EGKCKNTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        31 ~c--~~~C~~~~~~~~C~C~~g~~~~~   55 (221)
                      +|  .++|.+..++|+|.|+.||.|..
T Consensus         8 pC~ngg~C~~~~~~~~C~C~~g~~G~~   34 (39)
T d1g1ta2           8 SCSGHGECVETINNYTCKCDPGFSGLK   34 (39)
T ss_dssp             GGGGSEEEEEETTEEEEEECTTEESTT
T ss_pred             cCCCCcEEECCCCCEEEeCCCCCcCcC
Confidence            56  78999999999999999999886

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.0041  Score=31.63  Aligned_cols=35  Identities=26%  Similarity=0.653  Sum_probs=26.5

Q ss_pred             cccccCCCCCCC-CCceee--cCCceeeeCCCCccCCC
Q 036177           21 IDECLDKEKYHC-EGKCKN--TIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        21 ~~~C~~~~~~~c-~~~C~~--~~~~~~C~C~~g~~~~~   55 (221)
                      +.+|...-..-| +|.|..  ....+.|.|+.||.|+.
T Consensus         3 i~~C~~~~~~yC~nG~C~~~~~~~~~~C~C~~gY~G~R   40 (46)
T d1k36a_           3 ITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVR   40 (46)
T ss_dssp             EECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCSSTT
T ss_pred             eeeCCCcCCCcCcCCEEEEeCCCCccEeECCCCceecC
Confidence            456765445577 888975  45678899999999986

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=95.51  E-value=0.0053  Score=30.58  Aligned_cols=32  Identities=31%  Similarity=0.838  Sum_probs=24.1

Q ss_pred             cccccCCCCCCC--CCceeec-CCceeeeCCC-CccCCC
Q 036177           21 IDECLDKEKYHC--EGKCKNT-IGSYTCDCPI-GMYGDG   55 (221)
Q Consensus        21 ~~~C~~~~~~~c--~~~C~~~-~~~~~C~C~~-g~~~~~   55 (221)
                      ++.|.. .  .|  .|+|... .++|+|.|+. ||.|..
T Consensus         2 id~C~~-n--PC~ngG~C~~~~~~~y~C~C~~~G~~G~~   37 (42)
T d1q4ga2           2 VNPCCY-Y--PCQHQGICVRFGLDRYQCDCTRTGYSGPN   37 (42)
T ss_dssp             CCGGGG-C--CCCTTCEEEEETTTEEEEECTTSSEETTT
T ss_pred             CccCcC-C--CCCCCCEeeeCCCCCEEEECCCCCcCCcC
Confidence            466754 3  56  6899875 6889999985 898876

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.47  E-value=0.031  Score=39.52  Aligned_cols=79  Identities=13%  Similarity=0.029  Sum_probs=51.4

Q ss_pred             CccccceecccCceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC-CCceeeeeeEEEeCCeeEEEEEccc
Q 036177          141 NYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN-HRNVVKLLGCCLETEVPLLVYEFIL  219 (221)
Q Consensus       141 ~~~~~~~lg~G~fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~g~~~~~~~~~lv~e~~~  219 (221)
                      .+...+..+-++...||+... ++..+.+|............+.+|...+..+. +--+.+++......+..++||++++
T Consensus        15 ~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~   93 (263)
T d1j7la_          15 KYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD   93 (263)
T ss_dssp             TSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred             ceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecc
Confidence            333333333344567898765 55667788765543334445778888877663 4335677777777888899999987


Q ss_pred             C
Q 036177          220 N  220 (221)
Q Consensus       220 ~  220 (221)
                      +
T Consensus        94 G   94 (263)
T d1j7la_          94 G   94 (263)
T ss_dssp             S
T ss_pred             c
Confidence            5

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.0036  Score=33.48  Aligned_cols=33  Identities=27%  Similarity=0.574  Sum_probs=26.1

Q ss_pred             CCCCCCceeecC-CceeeeCCCCccCCCcc-cccc
Q 036177           29 KYHCEGKCKNTI-GSYTCDCPIGMYGDGKV-GCRG   61 (221)
Q Consensus        29 ~~~c~~~C~~~~-~~~~C~C~~g~~~~~~~-~c~~   61 (221)
                      +..|+..|.+.. +++.|.|+.||....+. .|.+
T Consensus         7 NGgC~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~   41 (57)
T d1rfnb_           7 NGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP   41 (57)
T ss_dssp             GGGCSSEEEECTTSCEEEECCTTEEECTTSSSEEE
T ss_pred             CCCcccEeeeCCCCCeEeECCCCCEECCCCCcccc
Confidence            447888999986 47899999999987766 6653

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.0044  Score=32.60  Aligned_cols=33  Identities=24%  Similarity=0.501  Sum_probs=25.7

Q ss_pred             CCCCCCceeecCC-ceeeeCCCCccCCCcc-cccc
Q 036177           29 KYHCEGKCKNTIG-SYTCDCPIGMYGDGKV-GCRG   61 (221)
Q Consensus        29 ~~~c~~~C~~~~~-~~~C~C~~g~~~~~~~-~c~~   61 (221)
                      +..|+..|.+..+ .+.|.|+.||....+. .|.+
T Consensus         6 NGGC~h~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~   40 (53)
T d2bz6l1           6 NGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP   40 (53)
T ss_dssp             GGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCCCcCEeeeCCCCCEEeECCCCCEECCCCCcccC
Confidence            4468889998876 5789999999887766 6653

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.03  E-value=0.017  Score=30.21  Aligned_cols=26  Identities=46%  Similarity=1.037  Sum_probs=20.7

Q ss_pred             CC--CCceee--cCCceeeeCCCCccCCCc
Q 036177           31 HC--EGKCKN--TIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        31 ~c--~~~C~~--~~~~~~C~C~~g~~~~~~   56 (221)
                      .|  .|+|..  ....++|.|+.+|.|...
T Consensus        13 ~C~NgG~C~~~~~~~~~~C~C~~gy~G~~C   42 (53)
T d3egfa_          13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRC   42 (53)
T ss_dssp             CSCSSCEEEEESSSSCEEEECCTTCCSSSS
T ss_pred             CCCCCcEeeccCCCCCeEeECCCCCcCCCC
Confidence            56  589976  345899999999999863

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.81  E-value=0.015  Score=28.61  Aligned_cols=24  Identities=29%  Similarity=0.926  Sum_probs=19.7

Q ss_pred             CCceeec--CCceeeeCCCCccCCCc
Q 036177           33 EGKCKNT--IGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        33 ~~~C~~~--~~~~~C~C~~g~~~~~~   56 (221)
                      .|+|...  .++|.|.|+.||.|...
T Consensus         9 gG~C~~~~~~~~y~C~C~~g~~G~~C   34 (41)
T d1tpga1           9 GGTCQQALYFSDFVCQCPEGFAGKSC   34 (41)
T ss_dssp             TCEEEEESSSSCEEEECCTTCBSSSC
T ss_pred             CCEEecCCCCCCeEECCCCCCCCCCc
Confidence            6899874  46799999999998864

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.27  E-value=0.021  Score=28.07  Aligned_cols=25  Identities=44%  Similarity=1.230  Sum_probs=20.1

Q ss_pred             CC--CCceeec-CCceeeeCCC-CccCCC
Q 036177           31 HC--EGKCKNT-IGSYTCDCPI-GMYGDG   55 (221)
Q Consensus        31 ~c--~~~C~~~-~~~~~C~C~~-g~~~~~   55 (221)
                      +|  .|.|.+. .++|+|.|+. ||.|..
T Consensus         8 PC~ngG~C~~~~~~~y~C~C~~~gy~G~~   36 (41)
T d1cvua2           8 PCQNRGECMSTGFDQYKCDCTRTGFYGEN   36 (41)
T ss_dssp             CCCTTCEEEEEETTEEEEECTTSSEETTT
T ss_pred             CCCCCCEEEECCCCCEEEeCcCCCcCCcC
Confidence            55  6899874 6789999985 898876

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.87  E-value=0.017  Score=29.61  Aligned_cols=26  Identities=31%  Similarity=0.965  Sum_probs=20.5

Q ss_pred             CC--CCceee--cCCceeeeCCCCccCCCc
Q 036177           31 HC--EGKCKN--TIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        31 ~c--~~~C~~--~~~~~~C~C~~g~~~~~~   56 (221)
                      .|  .|+|.+  ....+.|.|+.+|.|...
T Consensus        11 ~C~ngG~C~~~~~~~~~~C~C~~gy~G~~C   40 (48)
T d1nqlb_          11 YCLHDGVCMYIEALDKYACNCVVGYIGERC   40 (48)
T ss_dssp             EECTTCEEEEETTTTEEEEEECTTEESTTS
T ss_pred             CCCCCcEEeeeCCCCCeEEeCCCCcccCCC
Confidence            56  489986  446789999999998863

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=93.63  E-value=0.22  Score=34.62  Aligned_cols=65  Identities=17%  Similarity=0.125  Sum_probs=45.9

Q ss_pred             ceEEEEEEeCCCcEEEEEeccCCCcccHHHHHHHHHHHHcCC--CCceeeeeeEEEeCCeeEEEEEcccC
Q 036177          153 QGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN--HRNVVKLLGCCLETEVPLLVYEFILN  220 (221)
Q Consensus       153 fg~v~~~~~~~~~~vavk~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~g~~~~~~~~~lv~e~~~~  220 (221)
                      -+.||+-....+..+.+|.......   ..+.+|+..|+.+.  .-.+.++++.....+..+++|||+++
T Consensus        24 ~~~v~r~~~~~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G   90 (255)
T d1nd4a_          24 DAAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG   90 (255)
T ss_dssp             SCEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred             CCeEEEEEeCCCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeec
Confidence            3678988876777788887655333   34667887777663  33356677777777788999999864

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.36  E-value=0.011  Score=32.37  Aligned_cols=27  Identities=30%  Similarity=0.722  Sum_probs=20.7

Q ss_pred             CC--CCceee-----cCCceeeeCCCCccCCCcc
Q 036177           31 HC--EGKCKN-----TIGSYTCDCPIGMYGDGKV   57 (221)
Q Consensus        31 ~c--~~~C~~-----~~~~~~C~C~~g~~~~~~~   57 (221)
                      .|  .|.|..     ..++|.|.|+.||.|....
T Consensus        13 ~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce   46 (63)
T d1haea_          13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT   46 (63)
T ss_dssp             TSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred             cCCCCCEEeecccccCCCCEEeECCCCCCCCCcC
Confidence            55  578853     4568999999999998743

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.69  E-value=0.14  Score=23.97  Aligned_cols=23  Identities=26%  Similarity=0.563  Sum_probs=17.7

Q ss_pred             CCceee---cCCceeeeCCCCccCCC
Q 036177           33 EGKCKN---TIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        33 ~~~C~~---~~~~~~C~C~~g~~~~~   55 (221)
                      .|.|..   +.....|.||.+|.|.-
T Consensus         7 GG~Cvsyk~FS~I~rC~CPk~f~G~H   32 (40)
T d2i9aa1           7 GGTCVSNKYFSNIHWCNCPKKFGGQH   32 (40)
T ss_dssp             TCEEEECSSSTTCEEEECCTTEESTT
T ss_pred             CCEEEEEehhcCCEEecCCcccCcee
Confidence            467765   55677899999998865

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.37  E-value=0.13  Score=26.18  Aligned_cols=33  Identities=27%  Similarity=0.686  Sum_probs=21.2

Q ss_pred             cccCCCCCCC-CCceee--cCCceeeeCCCCccCCC
Q 036177           23 ECLDKEKYHC-EGKCKN--TIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        23 ~C~~~~~~~c-~~~C~~--~~~~~~C~C~~g~~~~~   55 (221)
                      .|.+.-..-| +|.|-.  ....+.|.|+.||.|..
T Consensus         6 pC~~~~~~yClnGgcc~~~~~~~~~C~C~~gy~G~R   41 (49)
T d1moxc_           6 DCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGAR   41 (49)
T ss_dssp             CCCCCSSCSSTTEEEEEETTTTEEEEEECTTEESTT
T ss_pred             ccCcccCCEeeCCeEEecCCCCCcEeECCCCCEecC
Confidence            3443223345 555543  44678899999999987

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.31  E-value=0.23  Score=24.12  Aligned_cols=24  Identities=29%  Similarity=0.666  Sum_probs=19.0

Q ss_pred             CCceee--cCCceeeeCCCCccCCCc
Q 036177           33 EGKCKN--TIGSYTCDCPIGMYGDGK   56 (221)
Q Consensus        33 ~~~C~~--~~~~~~C~C~~g~~~~~~   56 (221)
                      +|.|..  ......|.|+.||.|...
T Consensus        12 hG~C~~i~~l~~~~C~C~~gY~G~RC   37 (41)
T d1xdtr_          12 HGECKYVKELRAPSCICHPGYHGERC   37 (41)
T ss_dssp             SEEECCBGGGTBCCEEECTTEESTTC
T ss_pred             CcEEeecCcCCCceeECCCCCeecCc
Confidence            688876  446778999999999863

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.31  E-value=0.26  Score=25.15  Aligned_cols=25  Identities=28%  Similarity=0.751  Sum_probs=17.9

Q ss_pred             CC-CCcee--ecCCceeeeCCCCccCCC
Q 036177           31 HC-EGKCK--NTIGSYTCDCPIGMYGDG   55 (221)
Q Consensus        31 ~c-~~~C~--~~~~~~~C~C~~g~~~~~   55 (221)
                      -| +|.|-  ...+.+.|.|+.||.|..
T Consensus        15 yC~nGgcc~~~~~~~~~C~C~~gy~G~r   42 (50)
T d1ioxa_          15 YCIKGRCRFVVAEQTPSCVCDEGYIGAR   42 (50)
T ss_dssp             SCTTCCEEEETTTTEEEECCCTTEETTT
T ss_pred             CccCCeEEEeCCCCCcEeECCCCCeeCC
Confidence            45 44443  345678899999999986

>d1ccva_ g.22.1.1 (A:) Chymotrypsin inhibitor AMCI {Honeybee (Apis mellifera) [TaxId: 7460]}

class: Small proteins
fold: Serine protease inhibitors
superfamily: Serine protease inhibitors
family: ATI-like
domain: Chymotrypsin inhibitor AMCI
species: Honeybee (Apis mellifera) [TaxId: 7460]

Probab=83.27  E-value=0.45  Score=24.81  Aligned_cols=48  Identities=19%  Similarity=0.544  Sum_probs=26.5

Q ss_pred             cCCcccccC--CCCCcccccccCCCCCCCCCceeecCCceeeeCCCCccCCCccccc
Q 036177            6 QCSLIFLLK--KLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDGKVGCR   60 (221)
Q Consensus         6 ~c~~~~~~~--~~~c~~~~~C~~~~~~~c~~~C~~~~~~~~C~C~~g~~~~~~~~c~   60 (221)
                      +|+.+..++  ...|.  .+|.+.....|...|..     .|.|++||..+....|.
T Consensus         2 ~C~~~~~y~~Cg~~C~--~tC~~~~~~~C~~~C~~-----GC~C~~G~v~~~~g~CV   51 (56)
T d1ccva_           2 ECGPNEVFNTCGSACA--PTCAQPKTRICTMQCRI-----GCQCQEGFLRNGEGACV   51 (56)
T ss_dssp             CCCTTEEEEEEECTTC--CCSSCSCCCCSSSSCEE-----EEEECTTCEEETTTEEE
T ss_pred             cCcCcCEeCcccCcCc--cccCccCCCcCCCCCCC-----CCCCCCCeeEcCCCCEE
Confidence            566665443  23342  34544333345444532     49999999887655554

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=82.47  E-value=2.1  Score=31.80  Aligned_cols=74  Identities=22%  Similarity=0.264  Sum_probs=45.1

Q ss_pred             cceecccCceEEEEEEeCC-CcEEEEEeccC----CC---cccHHHHHHHHHHHHcC-CC--CceeeeeeEEEeCCeeEE
Q 036177          145 SRIIGQGGQGTVFKGMLTD-GRIVAVKKSKS----VH---ESNVEQFINEVVILSQI-NH--RNVVKLLGCCLETEVPLL  213 (221)
Q Consensus       145 ~~~lg~G~fg~v~~~~~~~-~~~vavk~~~~----~~---~~~~~~~~~e~~~l~~l-~h--~niv~l~g~~~~~~~~~l  213 (221)
                      .+.||.|....||+....+ ++.+.+|.-.+    ..   +........|.+.|..+ .+  ..+.+++.+  ..+..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            4568999999999988544 66788885432    11   11223345688777765 22  334555544  4455689


Q ss_pred             EEEcccC
Q 036177          214 VYEFILN  220 (221)
Q Consensus       214 v~e~~~~  220 (221)
                      +||++++
T Consensus       109 vmE~L~~  115 (392)
T d2pula1         109 VMEDLSH  115 (392)
T ss_dssp             EECCCTT
T ss_pred             EEeccCC
Confidence            9999864