Citrus Sinensis ID: 036252

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MATRLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAAAARAAPVAAAKEEKKEEPAEESDDDMGLSLFD
ccccccHHHHHHHHHHHHHHHHHHccEEEEEECcccccHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHHHccccccccccccccccEEEEEEcccHHHHHHHHHHcccccccccccccccCEEEccccccccccccHHHHHccccCEECccEEEEEccEEEEcccccccHHHHHHHHHccccccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHcHHccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHcccccHHHHHccccccccccccHHHHHcccccccccccccccccccc
******K**KKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFAAA**********************************L**
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MATRLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAAAARAAPVAAAKEEKKEEPAEESDDDMGLSLFD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
60S acidic ribosomal protein P0-1 Ribosomal protein P0 is the functional equivalent of E.coli protein L10.confidentO04204
60S acidic ribosomal protein P0 Ribosomal protein P0 is the functional equivalent of E.coli protein L10.confidentP41095
60S acidic ribosomal protein P0 Ribosomal protein P0 is the functional equivalent of E.coli protein L10.probableP05388

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2ZKR, chain g
Confidence level:very confident
Coverage over the Query: 264-272
View the alignment between query and template
View the model in PyMOL